Metagenome / Metatranscriptome Family F049954

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049954
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	81 residues
Representative Sequence	MGMYYFHLEDDETIVDSDGTDLVNTAAAREHAAAVARELTAKSTGFLDQKWSGWTMSVHDDSGLELFSLAMSDFGDGNSGK
Number of Associated Samples	98
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.71 %
% of genes near scaffold ends (potentially truncated)	28.77 %
% of genes from short scaffolds (< 2000 bps)	84.93 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.877 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.712 % of family members)
Environment Ontology (ENVO)	Unclassified (48.630 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.315 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.02% β-sheet: 28.44% Coil/Unstructured: 49.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF13545	HTH_Crp_2	45.89
PF04392	ABC_sub_bind	1.37
PF01042	Ribonuc_L-PSP	1.37
PF03401	TctC	0.68
PF13340	DUF4096	0.68
PF01970	TctA	0.68
PF02776	TPP_enzyme_N	0.68
PF07690	MFS_1	0.68
PF05050	Methyltransf_21	0.68
PF07813	LTXXQ	0.68
PF11431	Transport_MerF	0.68
PF02586	SRAP	0.68
PF02826	2-Hacid_dh_C	0.68
PF01227	GTP_cyclohydroI	0.68
PF00753	Lactamase_B	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.74
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.37
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.37
COG1784	TctA family transporter	General function prediction only [R]	0.68
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.68
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.68
COG3333	TctA family transporter	General function prediction only [R]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.88 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.88 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.88 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.45 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	74.66 %
Unclassified	root	N/A	17.12 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	47.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.49 %
Unclassified	root	N/A	17.12 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.37 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	47.26 %
Unclassified	root	N/A	17.12 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.05 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.05 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.37 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.68 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	47.26 %
Unclassified	root	N/A	17.12 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1.37 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.37 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.68 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.68 %
Methyloferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	47.26 %
Unclassified	root	N/A	17.12 %
Sphingomonas phyllosphaerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas phyllosphaerae	1.37 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.68 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.68 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.68 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	47.26 %
Unclassified	root	N/A	17.12 %
Sphingomonas phyllosphaerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas phyllosphaerae	1.37 %
Bradyrhizobium sp. LMTR 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LMTR 3	0.68 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	0.68 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.68 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0964586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	830	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101922602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1158	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101925633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300000550\|F24TB_10497843	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300003911\|JGI25405J52794_10011195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1715	Open in IMG/M
3300005713\|Ga0066905_100058443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2409	Open in IMG/M
3300005713\|Ga0066905_101888343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas phyllosphaerae	552	Open in IMG/M
3300005764\|Ga0066903_100687888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1799	Open in IMG/M
3300005764\|Ga0066903_106101979	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300005764\|Ga0066903_106922138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300005764\|Ga0066903_108634523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	518	Open in IMG/M
3300005937\|Ga0081455_10081504	All Organisms → cellular organisms → Bacteria → Proteobacteria	2650	Open in IMG/M
3300005937\|Ga0081455_10291664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1174	Open in IMG/M
3300006038\|Ga0075365_10021622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4016	Open in IMG/M
3300006038\|Ga0075365_10042350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2977	Open in IMG/M
3300006038\|Ga0075365_10049314	All Organisms → cellular organisms → Bacteria → Proteobacteria	2774	Open in IMG/M
3300006038\|Ga0075365_10262066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1215	Open in IMG/M
3300006038\|Ga0075365_10373029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300006051\|Ga0075364_10380170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas phyllosphaerae	963	Open in IMG/M
3300006051\|Ga0075364_10430706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300006051\|Ga0075364_10527171	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300006051\|Ga0075364_11013432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300006163\|Ga0070715_10752226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300006178\|Ga0075367_10545624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	736	Open in IMG/M
3300006195\|Ga0075366_11077278	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300006358\|Ga0068871_100899965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300006844\|Ga0075428_100561066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1220	Open in IMG/M
3300006845\|Ga0075421_101026399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	932	Open in IMG/M
3300006854\|Ga0075425_101676851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300006904\|Ga0075424_100770284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1027	Open in IMG/M
3300006953\|Ga0074063_13275023	Not Available	603	Open in IMG/M
3300006969\|Ga0075419_10434291	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300009090\|Ga0099827_10659406	Not Available	904	Open in IMG/M
3300009094\|Ga0111539_10070914	All Organisms → cellular organisms → Bacteria → Proteobacteria	4112	Open in IMG/M
3300009094\|Ga0111539_12182054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300009100\|Ga0075418_10514029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1286	Open in IMG/M
3300009100\|Ga0075418_11171170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300009100\|Ga0075418_11201603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	822	Open in IMG/M
3300009101\|Ga0105247_11202173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300009147\|Ga0114129_10384458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1853	Open in IMG/M
3300009176\|Ga0105242_13295634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300010046\|Ga0126384_10047403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2945	Open in IMG/M
3300010047\|Ga0126382_10084586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1996	Open in IMG/M
3300010358\|Ga0126370_11929151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300010359\|Ga0126376_13098549	Not Available	514	Open in IMG/M
3300010360\|Ga0126372_12886521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300010361\|Ga0126378_10108435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2756	Open in IMG/M
3300010361\|Ga0126378_12244623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	623	Open in IMG/M
3300010366\|Ga0126379_13019077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300010397\|Ga0134124_10340298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1411	Open in IMG/M
3300010398\|Ga0126383_10031103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4238	Open in IMG/M
3300010398\|Ga0126383_11840256	Not Available	694	Open in IMG/M
3300010400\|Ga0134122_12622707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300010403\|Ga0134123_11824074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300012022\|Ga0120191_10066021	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300012361\|Ga0137360_11026032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300012971\|Ga0126369_12003155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300012984\|Ga0164309_10144356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	1573	Open in IMG/M
3300012987\|Ga0164307_11031544	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300012988\|Ga0164306_10145340	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300015371\|Ga0132258_10014811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16620	Open in IMG/M
3300015371\|Ga0132258_11474058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1719	Open in IMG/M
3300015372\|Ga0132256_100004370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12050	Open in IMG/M
3300015372\|Ga0132256_103711980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300015374\|Ga0132255_100197314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2844	Open in IMG/M
3300016270\|Ga0182036_11001403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300016270\|Ga0182036_11031409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300016270\|Ga0182036_11472689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LMTR 3	571	Open in IMG/M
3300016294\|Ga0182041_11172329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300016294\|Ga0182041_11209805	Not Available	689	Open in IMG/M
3300016294\|Ga0182041_11368796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300016294\|Ga0182041_11516744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300016319\|Ga0182033_11246810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300016341\|Ga0182035_10102433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2100	Open in IMG/M
3300016341\|Ga0182035_11737560	Not Available	564	Open in IMG/M
3300016357\|Ga0182032_11683214	Not Available	553	Open in IMG/M
3300016357\|Ga0182032_11945677	Not Available	515	Open in IMG/M
3300016357\|Ga0182032_11954187	Not Available	514	Open in IMG/M
3300016371\|Ga0182034_11811743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300016387\|Ga0182040_10714331	Not Available	820	Open in IMG/M
3300016387\|Ga0182040_10856548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300016422\|Ga0182039_10710110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	887	Open in IMG/M
3300016422\|Ga0182039_11581973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	598	Open in IMG/M
3300016445\|Ga0182038_10134135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1863	Open in IMG/M
3300017994\|Ga0187822_10207984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300021444\|Ga0213878_10355345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300021560\|Ga0126371_10790530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300021560\|Ga0126371_11106588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	931	Open in IMG/M
3300021560\|Ga0126371_12676178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	605	Open in IMG/M
3300025931\|Ga0207644_10392764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1133	Open in IMG/M
3300027874\|Ga0209465_10308111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	793	Open in IMG/M
3300027880\|Ga0209481_10642418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300027909\|Ga0209382_10068642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4193	Open in IMG/M
3300031543\|Ga0318516_10106455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1588	Open in IMG/M
3300031544\|Ga0318534_10832436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300031545\|Ga0318541_10151402	Not Available	1273	Open in IMG/M
3300031546\|Ga0318538_10332436	Not Available	820	Open in IMG/M
3300031561\|Ga0318528_10076316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1732	Open in IMG/M
3300031573\|Ga0310915_10023649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3768	Open in IMG/M
3300031573\|Ga0310915_10044460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2842	Open in IMG/M
3300031573\|Ga0310915_10210060	Not Available	1363	Open in IMG/M
3300031680\|Ga0318574_10557062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	672	Open in IMG/M
3300031680\|Ga0318574_10828345	Not Available	542	Open in IMG/M
3300031682\|Ga0318560_10018036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3182	Open in IMG/M
3300031719\|Ga0306917_10466135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300031719\|Ga0306917_10554590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	903	Open in IMG/M
3300031744\|Ga0306918_10261500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1324	Open in IMG/M
3300031744\|Ga0306918_11481200	Not Available	519	Open in IMG/M
3300031747\|Ga0318502_10902644	Not Available	537	Open in IMG/M
3300031768\|Ga0318509_10015351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3446	Open in IMG/M
3300031771\|Ga0318546_10050694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2583	Open in IMG/M
3300031771\|Ga0318546_10191812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1393	Open in IMG/M
3300031778\|Ga0318498_10012444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3458	Open in IMG/M
3300031793\|Ga0318548_10375916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300031796\|Ga0318576_10244520	Not Available	846	Open in IMG/M
3300031832\|Ga0318499_10067487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1355	Open in IMG/M
3300031879\|Ga0306919_11202648	Not Available	576	Open in IMG/M
3300031890\|Ga0306925_10546082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1229	Open in IMG/M
3300031890\|Ga0306925_11181252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768	Open in IMG/M
3300031890\|Ga0306925_11333218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300031910\|Ga0306923_11638223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300031912\|Ga0306921_11522162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300031912\|Ga0306921_12110879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300031941\|Ga0310912_10801091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300031942\|Ga0310916_10407705	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300031945\|Ga0310913_10824963	Not Available	654	Open in IMG/M
3300031947\|Ga0310909_11043183	Not Available	666	Open in IMG/M
3300031954\|Ga0306926_10426514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1635	Open in IMG/M
3300031954\|Ga0306926_10846783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1099	Open in IMG/M
3300031954\|Ga0306926_11827013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300031954\|Ga0306926_12643941	Not Available	546	Open in IMG/M
3300031981\|Ga0318531_10408511	Not Available	614	Open in IMG/M
3300032001\|Ga0306922_11522121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300032001\|Ga0306922_11767632	Not Available	610	Open in IMG/M
3300032013\|Ga0310906_10339785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973	Open in IMG/M
3300032054\|Ga0318570_10154138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300032059\|Ga0318533_10569602	Not Available	831	Open in IMG/M
3300032059\|Ga0318533_11271684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300032063\|Ga0318504_10034815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2029	Open in IMG/M
3300032066\|Ga0318514_10354932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	777	Open in IMG/M
3300032076\|Ga0306924_11232761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300032091\|Ga0318577_10122572	Not Available	1228	Open in IMG/M
3300032091\|Ga0318577_10158664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1078	Open in IMG/M
3300032261\|Ga0306920_100055846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5749	Open in IMG/M
3300032261\|Ga0306920_101055979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1180	Open in IMG/M
3300033289\|Ga0310914_11228410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.34%
Host-Associated	Host-Associated	24.66%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.66%
Plants	Host-Associated → Plants	24.66%
Aquatic	Environmental → Aquatic	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.33%
Roots	Host-Associated → Plants → Roots	8.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.11%
Freshwater	Environmental → Aquatic → Freshwater	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.27%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	7.53%
Loam	Environmental → Terrestrial → Soil → Loam	6.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.27%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	7.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.05%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.90%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	7.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.05%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.37%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.68%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09645862	2228664022	Soil	MPMYYFHLYDDEKIVDSDGTDLVDVGAAREHAAGVARELTANSFGFLDQSWSGWTMRVHDDGGLEVFSLAMADFRHGNGNSGK
INPhiseqgaiiFebDRAFT_1019226022	3300000364	Soil	MPMYYFHLCDDETIVDPDGTDLVDIGAARDHAAGVARELTANSDGFLKQKWSQWTMTVHDDVGTKLFSIAMSDLGNGNSGK*
INPhiseqgaiiFebDRAFT_1019256331	3300000364	Soil	MPMYYFHLYDDEKIVDSDGTDLVDVGAAREHAAGVARELTANSFGFLDQSWSGWTMRVHDDGGLEVFSLAMADFRHGNGNSGK*
F24TB_104978431	3300000550	Soil	MSTYYFHLHDDKNIVDTDGTDLPNVDAAREHAAGVARELTAHSIGFLDQNWSGWTISVXDDGGVQLFSLAMSDFRDGNLGK*
JGI25405J52794_100111952	3300003911	Tabebuia Heterophylla Rhizosphere	MPMYYFHLYDDETIVDSDGTELFDVGAAREHAAGVARELTANSTGFLDQNWSGWTMRVHDDSGLELFSLALSDLGNGNSGK*
Ga0066905_1000584433	3300005713	Tropical Forest Soil	MAMYYFNLEDDETIVDTDGTDLVNIAAARQHAAAVARELTANSTGFLDERWSEWTMSVHDDSGLELFSLALSDFGDGNLGEITRPKVE*
Ga0066905_1018883431	3300005713	Tropical Forest Soil	MSMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSAWTMSVHDDSGLELFSLALSDFGDDNSGK*
Ga0066903_1006878883	3300005764	Tropical Forest Soil	MPMYYFHLHDDETIVDSDGTDLINVGAALEHAAGVARELTANSTGFLEQNWSRWTMSVHDGSGLELFSLPMSDSSDGYSGK*
Ga0066903_1061019792	3300005764	Tropical Forest Soil	MAMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDGSGLELFSLALSDFGDGNSGK*
Ga0066903_1069221381	3300005764	Tropical Forest Soil	MPMYYFDLYDDENIVDTDGTDLANVGAARAHATAVARELTVNSFSFLDQSWSGWTMKVRDDGGSELFSLAMADFRDGNSGK*
Ga0066903_1086345232	3300005764	Tropical Forest Soil	MGMYYFHLEDDETIVDSDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVHDDSGLELFSLAMSDFGDGNSGK*
Ga0081455_100815043	3300005937	Tabebuia Heterophylla Rhizosphere	MPMYYFHLCDDVPILDSEGTDLDNVGAARAHAIVVAREITFKSEDFLDQDWSRWTMTVHDDMGTELFSFAMSDFENGSSGK*
Ga0081455_102916641	3300005937	Tabebuia Heterophylla Rhizosphere	MPTFYFDLHDDETIVDSDGTDLVNVGAARAHAAGVARELTANSIGFLDESWSGWTMRVRDDGGSELFSLAMADFGNGNSGK*
Ga0075365_100216229	3300006038	Populus Endosphere	MPMYYFHLYDQEKVIDSDGTDLIDVGAAREHAAGVARELTANTAEFLDQQWSGWTMSIQDERGSELFSLAMSDFREGAAGKRKQ*
Ga0075365_100423505	3300006038	Populus Endosphere	MPMYYFHLRDDENVVDSDGTDLPNVGAAREHAAGVARELTANSAGLLDQNWSGWTMKVHDDRGLELFSLTMSDFRDGNSGK*
Ga0075365_100493142	3300006038	Populus Endosphere	MPMYYFHLYDDEKIVDSDGTDLVDVGAAREHAAGVARELTANSFGFLDQSWSGWTMRVHDDGGLEVFSLAMADFRDGNGNSGK*
Ga0075365_102620663	3300006038	Populus Endosphere	MSMYYFDLYDDEKIVDCDGTDLVDVGAAREHAAVVARELTANSFGFLDQSWSGWTMKVHDGGGLEVFSLAMADFRSGNSGI*
Ga0075365_103730292	3300006038	Populus Endosphere	MSRYYFDLYDDEKIVDCDGTDLADVGAAREHAAVVARELTANSFGFLDQSWSGWTMRVHDGGGLEVFSLAMADFRDGNSGK*
Ga0075364_103801701	3300006051	Populus Endosphere	PMYYFHLRDDENVVDSDGTDLPNVGAAREHAAGVARELTANSAGLLDQNWSGWTMKVHDDRGLELFSLTMSDFRDGNSGK*
Ga0075364_104307062	3300006051	Populus Endosphere	MPMYYFHLYDDEKIVDSDGTDLVDVGAAREHAAGVAHELTANSFGFLDQSWSGWTMKVHDGGGLEVFSLAMADFR
Ga0075364_105271712	3300006051	Populus Endosphere	MSMYYFDLYDDEKIVDCDGTDLVDVGAAREHAAVVARELTANSFGFLDQSWSGWTMRVHDGGGLEVFSLAMADFRDGNSGK*
Ga0075364_110134321	3300006051	Populus Endosphere	MYYFHLYDDEKVSDTDGTDLVDLAAARKHATDVAHELTANSTSFLDHSWALWTMRVHNDRGVELFSLAMSDFRNGNGNGNSGK*
Ga0070715_107522262	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPMYYFHLQDDDTITDTEGTDLVDLAAARVHAVGVARELTANSDGILKHTWSLWTMTVHNDVGTELFALAMSDFGHGHPGNGGSPDEG*
Ga0075367_105456242	3300006178	Populus Endosphere	MPMYYFHLYDEEKIMDSDGTDLIDVGAAREHAAGVARELTANTAGFLDEQWSGWTMMIQDESGLELFSLAMSDFKNGNSAKRKQ*
Ga0075366_110772782	3300006195	Populus Endosphere	MPMYYFHLYDDEKIVDSDGTDLVDVGAAREHAAGVARELTANSFGFLDQSWSGWTMKVHDDCGLELFSLTMSDFRDGNSGK*
Ga0068871_1008999652	3300006358	Miscanthus Rhizosphere	VYHFHLYDDETIFDSDGTDLIDVGAAREHAADVARELTANSTGFLDEQWSGWTMRVQDGSGLELFSLAMSEFKNGNSGK*
Ga0075428_1005610662	3300006844	Populus Rhizosphere	MSMYYFDLYDDEKIVDCDGTDLADVGAAREHAAVVARELTANSFGFLDQSWSGWTMRVHDGGGLEVFSLAMADFRDGNSGK*
Ga0075421_1010263991	3300006845	Populus Rhizosphere	MSMYYFDLYDDEKIVDCDGTDLVDVGAAREHAAVVARELTANSFGFLDQSWSGWTMRVHDDGGLEVFSLPMADFRDGNSGK*
Ga0075425_1016768512	3300006854	Populus Rhizosphere	MPMYYFNLYDDETILDSDGTDLIDIAAARDHAAGVARELTANSDGFLKQKWSQWTMTVHDDVGTALFSIAMSDLGNGNSGK*
Ga0075424_1007702842	3300006904	Populus Rhizosphere	MPMYYFNLYDDETILDSDGTDLIDIAAARDHAAGVARALTANSDGFLKQKWSQWTMTVHDDVGTALFSIAMSDLGNGNSGK*
Ga0074063_132750231	3300006953	Soil	LYDDETIVDSDGTDLIDVGAAREHAADVARELTANSTGFLDQQWSGWTMRVHDGSGLELFSLAMSDFKNGNSGK*
Ga0075419_104342912	3300006969	Populus Rhizosphere	MPMYYFHLYDDEKIVDSDGTDLVDVGAAREHAAGVARELTANSFGFLDQSWSGWTMRVHDDGGLEIFSLAMADFRDGNGNSGK*
Ga0099827_106594061	3300009090	Vadose Zone Soil	MYYFHLEDDETIVDSDGTDLVNTAAAREHAAAVARELTAKSTGLLDEKWSGWTMSVHDDRGLELFSLAMSDFGDGNSGE*
Ga0111539_100709143	3300009094	Populus Rhizosphere	MYYFHLYDDEKIVDSDGTDLVDVGAAREHAAGVARELTANSFGFLDQSWSGWTMRVHDDGGLEVFSLAMADFRDGNGNSGK*
Ga0111539_121820541	3300009094	Populus Rhizosphere	MYYFHLYDEEKIMDSDGTDLIDVGAAREHAAGVARELTANTAGFLDEQWSGWTMMIQDESGLELFSLAMSDFKNGNSAKRKQ*
Ga0075418_105140292	3300009100	Populus Rhizosphere	MYYFHLRDDENVVDSDGTDLPNVGAAREHAAGVARELTANSAGLLDQNWSGWTMKVHDDRGLELFSLTMSDFRDGNSGK*
Ga0075418_111711702	3300009100	Populus Rhizosphere	MSRYYFDLYDDEKIVDCDGTDLADVGAAREHAAVVARELTANSFGFLDQSWSGWTMKVHDGGGLEVFSLAMADFRDGNSGK*
Ga0075418_112016032	3300009100	Populus Rhizosphere	MYYFHLQDDETIVDSDGTDLVDLSAAREHAAGVARELTANSFGFLDENWSGWIMRVHDDSGSELFSLTMSDFRDGNSGK*
Ga0105247_112021732	3300009101	Switchgrass Rhizosphere	MPMFYFHLYDEEHILDSDGTNLIDVDAAREHAAGVARELTANNADFLDQSWSGWTMRVHDHRGSEVFSLAMSDFRDGNGNSKK*
Ga0114129_103844582	3300009147	Populus Rhizosphere	MYYFHLYDDEKIVDSDGTDLVDVGAAREHAAGVARELTANSFGFLDQSWSGWTMRVHDDGGLEIFSLAMADFRDGNGNSGK*
Ga0105242_132956342	3300009176	Miscanthus Rhizosphere	MYYFHLYDQEKIMDSDGTDLIDVGAAREHAAGVARELTANTAGFLDEQWSGWTMMVHDESGLELFSLAMSDFKDGNPGKRKQ*
Ga0126384_100474035	3300010046	Tropical Forest Soil	MYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSAWTMSVHDDSGLELFSLALSDFGDDNSGK*
Ga0126382_100845863	3300010047	Tropical Forest Soil	YYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSAWTMSVHDDSGLELFSLALSDFGDDNSGK*
Ga0126370_119291511	3300010358	Tropical Forest Soil	MAMYYFHLEDDETIVDTDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSAWTMSVHDDSGLELFSLALSDFGDDNSGK*
Ga0126376_130985491	3300010359	Tropical Forest Soil	SPMPMYYFNLADDETIVDTDGTDLVNVGAAREYAAGVARELTTNSTGFLDENWSAWTMRVHDDSGLELFSLAMSDFRDGNSGK*
Ga0126372_128865211	3300010360	Tropical Forest Soil	MGMYYFHLEDDETIVDSDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVHDNSGLELFSLAMADFGDG
Ga0126378_101084354	3300010361	Tropical Forest Soil	MAIYYFHLEDDETIVDSDGTDLVNIAAARQHAVAVARELTANSAGFLDQRWSEWTMSVHDDTGLELFSLALKDFGDGNSGK*
Ga0126378_122446232	3300010361	Tropical Forest Soil	MYYFDLYDDENILDTDGTDLANVGAARAHATAVARELTVNSFSFLDQSWSGWTMKVRDDGGSELFSLAMADFRDGNSGK*
Ga0126379_130190771	3300010366	Tropical Forest Soil	MGMYYFHLEDDETIVDSDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVHDDSGLELFSLAMSDFRDGNSRK*
Ga0134124_103402981	3300010397	Terrestrial Soil	MPVYHFHLYDDETIFDSDGTDLIDVGAAREHAADVARELTANSTGFLDEQWSGWTMRVHDGSGLELFSLAMSDFKNGNSAK*
Ga0126383_100311033	3300010398	Tropical Forest Soil	MYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSSWTMSVHDDSGLELFSLALSDFGDDNSGK*
Ga0126383_118402561	3300010398	Tropical Forest Soil	MAMYYFHLEDDETIVDTDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDDTGLELFSLALKDFGDGNSGK*
Ga0134122_126227072	3300010400	Terrestrial Soil	MYYFHLYDQEKIMDSDGTDLIDVGAAREHAAGVARELTANTVDFLDEHWSGWTMSIQDESGLELFSLAMSDYRNGNSRK*
Ga0134123_118240742	3300010403	Terrestrial Soil	MPVYHFHLYDDETIFDSDGTDLIDVGAAREHAADVARELTANSTGFLDEQWSGWTMRVHDGSGLELFSLAMSDFKNGNSGK*
Ga0120191_100660211	3300012022	Terrestrial	MYYFHLNDDQNIVDSDGTNLVDVGAAREHAAGVARELTANSTGFLDETWSGWTMRVHDDSGLELFSLAMSDFKDGNSGK*
Ga0137360_110260321	3300012361	Vadose Zone Soil	MAMYYFHLEDDETIVDSDGTDLANVSAAREHATAVARELTVNSFSFLDQNWSGWTMSVHDANGLKVFSLAMSDGSMLTSNCR*
Ga0126369_120031552	3300012971	Tropical Forest Soil	MAMYYFHLEDDETIVDTDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDDTGLELFSLALKDFGDGDAGK*
Ga0164309_101443562	3300012984	Soil	MPVYHFHLYDDETIVDSDGTDLIDVGAAREHAADVARELTANSTGFLDQQWSGWTMRVHDGSGLELFSLAMSDFKNGNSAK*
Ga0164307_110315442	3300012987	Soil	MPVYHFHLYDDETIVDSDGTDLIDVGAAREHAADVARELTANSTGFLDEQWSGWTMRVHDGSGLELFSLAMSDFKNGNSAK*
Ga0164306_101453402	3300012988	Soil	MPVYHFHLYDDETIFDSDGTDLIDVGAAREHAADVARELTANSTGFLDQQWSGWTMRVHDGSGLELFSLAMSDFKNGNSGK*
Ga0132258_100148119	3300015371	Arabidopsis Rhizosphere	MYYFNLHNDDTIVDSDGTDLVDLSAARKHAAGVAHELTANSAGFLDQSWSGWTMKVHDDSGLELFSLTMSDFRDGNSGK*
Ga0132258_114740582	3300015371	Arabidopsis Rhizosphere	MYYFHLYDQEKIMDSDGTDLIEVGAAREHAAGVARELTANTVDFLDEHWSGWTMSIQDESGLELFSLAMSDFKDGNPGKRKQ*
Ga0132256_1000043708	3300015372	Arabidopsis Rhizosphere	MYYFNLHNDDTIVDSDGTDLVDLSAAREHAAGVAHELTANSAGFLDQSWSGWTMKVHDDSGLELFSLTMSDFRDGNSGK*
Ga0132256_1037119801	3300015372	Arabidopsis Rhizosphere	MGAEGFPMAMFYFHLYDDEHILDSDGTDLINVDAAREHAAGVARELTFNNPDFLDQSWSGWTMKVHDHSGSELFSLAMSDFRDGNGDSEK*
Ga0132255_1001973147	3300015374	Arabidopsis Rhizosphere	MPVYHFHLYDDETIVDSDGTDLIDVGAAREHAADVARELTANSTGFLDQQWSGWTMRVHDGSGLELFSLAMSDFKNGNSGK*
Ga0182036_110014032	3300016270	Soil	MPTYYFHLHDDETIVDSDGTDLIDVGAAREHAVGVARELTANSTGFLDQNWSGWTLRVHGDSGLELFSLAMSDFRDGNSGE
Ga0182036_110314092	3300016270	Soil	ETIIDTDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVHDDSGLELFSLAMSDFGEGNSGK
Ga0182036_114726891	3300016270	Soil	MSMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDDTGLELFSLALSDFGDDNSGK
Ga0182041_111723292	3300016294	Soil	MPMYYFHLYDDETIVDSDGTDLIDVGAAREHAAGVARELTAGSIGFLGGNWSEWTMRVHNESGLELFSLAMSDFGNGNSRR
Ga0182041_112098051	3300016294	Soil	EAIVDSDGTDLIDVGAAREHAAGVAREHTANSTGFLDQNWSEWTMKVHDGSGLELFSLALSNFGNGNSGK
Ga0182041_113687962	3300016294	Soil	MPTYYFHLHDDETIADSDGTDLIDVDAAREHAVGVARELTANSTGFLDQNWSGWTMRVHDDSGLELFSLAMSDFRDGN
Ga0182041_115167441	3300016294	Soil	MPMYYFHLYDDETIVDTDGTDLIDVGAARDHAAGVARELTANSTDFLDQNWSGWTMRVHDESGLELFSLAMS
Ga0182033_112468101	3300016319	Soil	MPTYYFHLHDDETIVDSDGTDLIDVGAAREHAVGVARELTANSTGFLDQNWSGWTLRVHDDSGLELFSLAMSDFRDGNSGK
Ga0182035_101024331	3300016341	Soil	MGMYYFHLEDDETIIDTDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVHDDSGLELFSLAMSDFRDSNSGK
Ga0182035_117375601	3300016341	Soil	MSMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSSWTMSVHDDSGLELFSLALSDFGDGNSGK
Ga0182032_116832141	3300016357	Soil	MPMYYFHLHDDETIVDSDGTDLINVGAAREHAAGVARELTANSTGFLEQNWSRWTMSVHDGSGLELFSLPMSDSSDGYSGK
Ga0182032_119456771	3300016357	Soil	PMPMYYFHLYDDETIVDSDGTDLIDVGAAREHAAGVARELTANSTGFLDQNWSEWTMKVHDGSGLELFSLALSNFGNGNSGK
Ga0182032_119541871	3300016357	Soil	MAMYYFNLEDDETIVDTDGTDLVNIAAAHQHAAAVARELTENSTGFLDERWSEWTMSVHDDSGVELFSLPLSDFGHGNSGK
Ga0182034_118117431	3300016371	Soil	MPMYYFHLYDDETIVDIDGTDLINVDAAQKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSL
Ga0182040_107143311	3300016387	Soil	MPMYYFHLYGDETIVDSDGTDLVDIGAAREHAAGVARELTANSTGFLDQNWSEWTMKVHDGSGLELFSLALSNFGNGNSGK
Ga0182040_108565481	3300016387	Soil	MPMYYFHLYDDETIVDTDGTDLIDVGAARDHAAGVARELTANSTDFLDQNWSGWTMRVHDESGLELFSLAMSDFRDGNSGK
Ga0182039_107101101	3300016422	Soil	MPMYYFDLRDDENVVDSDGTDLVNIAAARQHAAAVVRELTANSTGFLDQRWSEWTMSVHDGSGLELFSLALSDFGDDNSGK
Ga0182039_115819731	3300016422	Soil	MYYFHLHDDETIVDSDGTDLINVGAAREHAAGVARELTANSTGFLEQNWSRWTMSVHDGSGLELFSLPMSDSSDGYSGK
Ga0182038_101341353	3300016445	Soil	MPMYYFHLYDDETIVDIDGTDLINVHAAQKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLAMSDFRDGN
Ga0187822_102079841	3300017994	Freshwater Sediment	YFHLNDDKSIVDCDGTDLVNVGAAREHAAAVARELTASNPGILGQNWSAWTMNVQDDSGSELFFLAMSEFRDSGAGNDIGEKRPVPLSDPSRDRS
Ga0213878_103553451	3300021444	Bulk Soil	MGMYYFHLEDDETIIDTDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVYDDSGLELFSLAMSDFGDGNSGK
Ga0126371_107905302	3300021560	Tropical Forest Soil	MGMYYFHLEDDETIVDSDGTDLVNTAAAREHAAAVARELTAKSTGFLDQKWSGWTMSVHDDSGLELFSLAMSDFGDGNSGK
Ga0126371_111065881	3300021560	Tropical Forest Soil	MAMYYFHLEDDETIVDTDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDDTGLELFSLALKDFGDGDSGK
Ga0126371_126761781	3300021560	Tropical Forest Soil	MPMYYFDLYDDENIVDTDGTDLANVGAARAHATAVARELTVNSFSFLDQSWSGWTMKVRDDGGSELFSLAMADFRDGNSGK
Ga0207644_103927641	3300025931	Switchgrass Rhizosphere	HLYDQEKIMDSDGTDLIDVGAAREHAAGVARELTANTAGFLDEQWSGWTMMVHDESGLELFSLAMTDFKDGNPGKRKQ
Ga0209465_103081111	3300027874	Tropical Forest Soil	MAMYYFHLEDDETIVDTDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDDTGLELFS
Ga0209481_106424181	3300027880	Populus Rhizosphere	MPMYYFHLYDDEKIVDSDGTDLVDVGAAREHAAGVARELTANSFGFLDQSWSGWTMRVHDDGGLEVFSLAMADFRDGNGNSGK
Ga0209382_100686422	3300027909	Populus Rhizosphere	MPMYYFHLRDDENVVDSDGTDLPNVGAAREHAAGVARELTANSAGLLDQNWSGWTMKVHDDRGLELFSLTMSDFRDGNSGK
Ga0318516_101064553	3300031543	Soil	MPMYYFHLYDDETIVDIDGTDLINVEAAEKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLAMSDFRDGNSGK
Ga0318534_108324362	3300031544	Soil	MGMYYFHLEDDETIIDTDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVHDDSGLELFSLAMSDFGEGNSGK
Ga0318541_101514022	3300031545	Soil	HRWAERDRPMPMYYFHLYDDETIVDSDGTDLIDVGAAREHAAGVARELTANSTGFLDQNWSEWTMKVHDGSGLELFSLALSNFGNGNSGK
Ga0318538_103324362	3300031546	Soil	MPMYYFHLYDDETIVDSDGTDLIDVGAAREHAAGVARELTANSTGFLDQNWSEWTMKVHDGSGLELFSLALSNFGNGNSGK
Ga0318528_100763161	3300031561	Soil	MPMYYFHLYDDETIVDIDGTDLINVEAAEKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLAMSDFRDGNSG
Ga0310915_100236492	3300031573	Soil	MPMYYFHLYDDERIVDTDGTDLVDVGAAREHATGVARELTANSTGFLDQNWSEWTMKVHDGSGLELFSLALSNFGNGNSGK
Ga0310915_100444602	3300031573	Soil	MPMYYFHLYDDETIVDIDGTDLINVDAAQEHAAGVARELTAKTTGFLDQNWSGWTMRIHDNNGLELFSLAMSDFRDGNSGK
Ga0310915_102100602	3300031573	Soil	MAMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVVRELTANSTGFLDQRWSEWTMSVHDGSGLELFSLALSDFGDGNSGK
Ga0318574_105570621	3300031680	Soil	YYFHLYGDETIVDSDGTDLVDIGAAREHAAGVARELTAGSIGFLGGNWSEWTMRVQDDSGLELFSLAMSDFRDSNSGK
Ga0318574_108283451	3300031680	Soil	LLVRHAKNEPLDGQERSPMSMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVVRELTANSTGFLDQRWSEWTMSVHDGSGLELFSLALSDFGDGNSGK
Ga0318560_100180361	3300031682	Soil	MPMYYFHLYDDETIVDIDGTDLINVEAAEKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLAMSDFRDGNSGN
Ga0306917_104661351	3300031719	Soil	MPMYYFHLYDDETIVDTDGTDLIDVGAARDHAAGVARELTANSTDFLDQNWSGWTMRVHDESGLELFSLAMSNFGNGYSRR
Ga0306917_105545902	3300031719	Soil	MSMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSAWTMSVHDDSGLELF
Ga0306918_102615002	3300031744	Soil	MAMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDGTGLELFSLALKDFGDGNSGK
Ga0306918_114812001	3300031744	Soil	MYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSAWTMSVHDDSGLELFSLALSDFGDGNSGK
Ga0318502_109026441	3300031747	Soil	PMPMYYFHLYDDETIVDIDGTDLINVHAAQKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLAMSDFRDGNSGK
Ga0318509_100153514	3300031768	Soil	MPMYYFHLYDDETIVDIDGTDLINVHAAQKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLAMSDFRDGNSGK
Ga0318546_100506944	3300031771	Soil	MPMYYFHLYDDETIVDIDGTDLINVEAAEKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLAMSDFRDGNSGQ
Ga0318546_101918122	3300031771	Soil	MAMYYFNLEDDETIVDTDGTDLVNIAAAHQHAAAVARELTENSTGFLDERWSEWTMSVHDDSGVELFSLPLSDFGDGNSGK
Ga0318498_100124441	3300031778	Soil	MPMYYFHLYDDETIVDIDGTDLINVDAAQEHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLAMSDFRDGNSGK
Ga0318548_103759162	3300031793	Soil	QMGMYYFHLEDDETIIDTDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVHDDSGLELFSLAMSDFGEGNSGK
Ga0318576_102445201	3300031796	Soil	MYYFHLYDDETIVDSDGTDLIDVGAAREHAAGVARELTANSTGFLDQNWSEWTMKVHDGSGLELFSLALSNFGNGNSGK
Ga0318499_100674871	3300031832	Soil	MPMYYFHLYDDETIVDIDGTDLINVEAAEKHAAGVARELTAKTTGFLDQNWSGWTMRIHDNNGLELFSLAMSDFRDGNSGK
Ga0306919_112026481	3300031879	Soil	EPLYGQENPMAIYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDDTGLELFSLALKDFGDGNSGK
Ga0306925_105460822	3300031890	Soil	MAMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDGSGLELFSLALSDFGDGNSGK
Ga0306925_111812521	3300031890	Soil	RVPMAMYYFHLEDDETIVDSDGTDLVNTAAAHAHAVVVARELTAKSTGLLDQKWSGWTMSVHDDSGLALFSLAMSDFGDDNSEK
Ga0306925_113332182	3300031890	Soil	MPMYYFHLYDDERIVDTDGTDLVDVGAAREHATGVARELTANSTGFLDQNWSGWTMRVHDESGLELFALAMSNFGNGSSGK
Ga0306923_116382232	3300031910	Soil	MPMYYFHLYGDETIVDSDGTDLVDIGAAREHAAGVARELTAGSIGFLGGNWSEWTMRVQDDSGLELFSLAMSDFRDSNSGK
Ga0306921_115221622	3300031912	Soil	MSMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSAWTMSVHDDSGLELFSLALSDFGDGNSGK
Ga0306921_121108792	3300031912	Soil	MPTYYFHLHDDETIVDSDGTDLINVGAAREHAAGVARELTANSTGFLEQNWSRWTMSVHDGSGLELFSLPMSDSSDGYSGQ
Ga0310912_108010912	3300031941	Soil	MAMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLNQRWSEWTMSVHDDTGLELFSLALKDFGDGNSGK
Ga0310916_104077051	3300031942	Soil	LYGDETIVDSDGTDLVDIGAAREHAAGVARELTAGSIGFLGGNWSEWTMRVQDDSGLELFSLAMSDFRDSNSGK
Ga0310913_108249632	3300031945	Soil	MYYFDLRDDENVVDSDGTDLVNIAAARQHAAAVVRELTANSTGFLDQRWSEWTMSVHDGSGLELFSLALSDFGDGNSGK
Ga0310909_110431832	3300031947	Soil	SPMSMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSAWTMSVHDDSGLELFSLALSDFGDGNSGK
Ga0306926_104265142	3300031954	Soil	MPMYYFDLRDDENVVDSDGTDLVNIAAARQHAAAVVRELTANSTGFLDQRWSEWTMSVHDGSGLELFSLALSDFGDGNSGK
Ga0306926_108467831	3300031954	Soil	MPMYYFHLHDDETIVDSDGTDLINVGAAREHAAGVARELTANSTGFLEQNWSRWTMSVHDGSGLELFSLPMSDSSDGYSGQ
Ga0306926_118270132	3300031954	Soil	MAMYYFHLEDDETIVDSDGTDLVNTAAAHAHAVVVARELTAKSTGLLDQKWSGWTMSVHDDSGLALFSLAMSDFGDDNSEK
Ga0306926_126439411	3300031954	Soil	DDETIVDSDGTDLVNIAAARQHAAAVARELTANSTGFLDERWSEWTMSVHDASGLEVFSLALSDFGDGNSGK
Ga0318531_104085111	3300031981	Soil	MPMYYFHLYDDETIVDIDGTDLINVDAAQKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLAMSDFRDGNSGK
Ga0306922_115221212	3300032001	Soil	MSMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDGTGLELFSLALKDFGDGNSGK
Ga0306922_117676322	3300032001	Soil	IVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSAWTMSVHDDSGLELFSLALSDFGDGNSGK
Ga0310906_103397851	3300032013	Soil	MPVYHFHLYDDETIVDSDGTDLIDVGAAREHAADVARELTANSTGFLDQQWSGWTMRVHDGSGLELFSLAMSDFKNGNSGK
Ga0318570_101541382	3300032054	Soil	MGMYYFHLEDDETIIDTDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSIHDDSGLELFSLAMSDFGEGNSGK
Ga0318533_105696021	3300032059	Soil	YYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSTGFLDERWSEWTMSVHDASGLEVFSLALSDFGDGNSGK
Ga0318533_112716841	3300032059	Soil	LLSAAAKRSREKIAPRLGEESPMPVYYFHLYDDETIVDTDGTDLIDVGAARDHAAGVARELTANSAGFLDQNWSVWTMRVHNESGLELFSLAMSDFGNGNSRR
Ga0318504_100348151	3300032063	Soil	MPMYYFHLYDDETIVDIDGTDLINVEAAEKHAAGVARELTAKTTGFLDQNWSGWTMRVHDNNGLELFSLA
Ga0318514_103549321	3300032066	Soil	RVPMGMYYFHLEDDETIIDTDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVHDDSGLELFSLAMSDFGEGNSGK
Ga0306924_112327611	3300032076	Soil	MAMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSTGFLDERWSEWTMSVHDASGLEVFSLALSDFGDGNSGK
Ga0318577_101225722	3300032091	Soil	AERDRPMPMYYFHLYDDETIVDSDGTDLIDVGAAREHAAGVARELTANSTGFLDQNWSEWTMKVHDGSGLELFSLALSNFGNGNSGK
Ga0318577_101586641	3300032091	Soil	MGMYYFHLEDDETIVDSDGTDLVNIAAARQHAAAVARELTANSAGFLDQRWSEWTMSVHDDSGVELFSLPLSDFGDGNSGK
Ga0306920_10005584612	3300032261	Soil	MGMYYFHLEDDETIIDTDGTDLVNTAAAREHAAAVARELTAKSTGLLDQKWSGWTMSVHDDSGLELFSLAMSDFGEGNS
Ga0306920_1010559793	3300032261	Soil	MPMYYFHLYDDERIVDTDGTDLVDVGAAREHATGVARELTANSTGFLDQNWSGWTMRVHDESGLELFALA
Ga0310914_112284101	3300033289	Soil	MPMYYFHLYDDETIVDSDGTDLIDVGAAREHAAGVARELTANSTDFLDQNWSGWTMRVHDESGLELFSLAMSNFGNGYSRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049954

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences