NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049951

Metagenome / Metatranscriptome Family F049951

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049951
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 43 residues
Representative Sequence MKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA
Number of Associated Samples 110
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 74.66 %
% of genes near scaffold ends (potentially truncated) 30.14 %
% of genes from short scaffolds (< 2000 bps) 82.19 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (85.616 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(9.589 % of family members)
Environment Ontology (ENVO) Unclassified
(28.082 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.836 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 45.07%    β-sheet: 0.00%    Coil/Unstructured: 54.93%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF03454MoeA_C 40.41
PF12804NTP_transf_3 17.12
PF03364Polyketide_cyc 8.22
PF02634FdhD-NarQ 8.22
PF03205MobB 2.05
PF11854MtrB_PioB 2.05
PF03264Cytochrom_NNT 2.05
PF01292Ni_hydr_CYTB 1.37
PF01040UbiA 1.37
PF03401TctC 1.37
PF00881Nitroreductase 0.68
PF07635PSCyt1 0.68
PF12849PBP_like_2 0.68
PF01717Meth_synt_2 0.68
PF00005ABC_tran 0.68
PF15943YdaS_antitoxin 0.68
PF07681DoxX 0.68
PF12838Fer4_7 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG0303Molybdopterin Mo-transferase (molybdopterin biosynthesis)Coenzyme transport and metabolism [H] 40.41
COG1526Formate dehydrogenase assembly factor FdhD, a sulfurtransferaseEnergy production and conversion [C] 8.22
COG1763Molybdopterin-guanine dinucleotide biosynthesis proteinCoenzyme transport and metabolism [H] 2.05
COG3005Tetraheme cytochrome c subunit NapC of nitrate or TMAO reductaseEnergy production and conversion [C] 2.05
COG1969Ni,Fe-hydrogenase I cytochrome b subunitEnergy production and conversion [C] 1.37
COG2864Cytochrome b subunit of formate dehydrogenaseEnergy production and conversion [C] 1.37
COG3038Cytochrome b561Energy production and conversion [C] 1.37
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 1.37
COG3658Cytochrome b subunit of Ni2+-dependent hydrogenaseEnergy production and conversion [C] 1.37
COG4117Thiosulfate reductase cytochrome b subunitInorganic ion transport and metabolism [P] 1.37
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 0.68
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 0.68
COG4270Uncharacterized membrane proteinFunction unknown [S] 0.68


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms85.62 %
UnclassifiedrootN/A14.38 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459015|G14TP7Y01BYR5MAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria683Open in IMG/M
2170459019|G14TP7Y02ITXNXAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria568Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_103106920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae509Open in IMG/M
3300000891|JGI10214J12806_10560586All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae505Open in IMG/M
3300002075|JGI24738J21930_10010884All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2013Open in IMG/M
3300002906|JGI25614J43888_10210374All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium527Open in IMG/M
3300004114|Ga0062593_100296757All Organisms → cellular organisms → Bacteria → Proteobacteria1374Open in IMG/M
3300004114|Ga0062593_100708368All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales983Open in IMG/M
3300004114|Ga0062593_100757282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae958Open in IMG/M
3300004463|Ga0063356_102924206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales736Open in IMG/M
3300004479|Ga0062595_100086953All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1606Open in IMG/M
3300004479|Ga0062595_100341518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1037Open in IMG/M
3300004633|Ga0066395_10516455All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales690Open in IMG/M
3300005289|Ga0065704_10720454All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales553Open in IMG/M
3300005293|Ga0065715_10960745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria543Open in IMG/M
3300005331|Ga0070670_100302244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1400Open in IMG/M
3300005332|Ga0066388_100141385All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2971Open in IMG/M
3300005332|Ga0066388_100156947All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2861Open in IMG/M
3300005332|Ga0066388_100536631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1801Open in IMG/M
3300005332|Ga0066388_100590108All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1735Open in IMG/M
3300005332|Ga0066388_100904410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1460Open in IMG/M
3300005332|Ga0066388_101209088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1293Open in IMG/M
3300005332|Ga0066388_102637237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales916Open in IMG/M
3300005332|Ga0066388_105422896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales646Open in IMG/M
3300005356|Ga0070674_102173433All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae507Open in IMG/M
3300005363|Ga0008090_13270876All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae771Open in IMG/M
3300005366|Ga0070659_100141943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1955Open in IMG/M
3300005436|Ga0070713_100183709All Organisms → cellular organisms → Bacteria1880Open in IMG/M
3300005440|Ga0070705_100343316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1086Open in IMG/M
3300005466|Ga0070685_10962400All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales638Open in IMG/M
3300005529|Ga0070741_10006219All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales25827Open in IMG/M
3300005534|Ga0070735_10242695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1094Open in IMG/M
3300005564|Ga0070664_100145796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2088Open in IMG/M
3300005719|Ga0068861_100755326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales909Open in IMG/M
3300005764|Ga0066903_100043747All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5331Open in IMG/M
3300005764|Ga0066903_100224992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2851Open in IMG/M
3300005764|Ga0066903_101812441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1166Open in IMG/M
3300005764|Ga0066903_102778811All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales950Open in IMG/M
3300005834|Ga0068851_10831742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium575Open in IMG/M
3300005841|Ga0068863_100300061All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1558Open in IMG/M
3300005842|Ga0068858_102532582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium507Open in IMG/M
3300005937|Ga0081455_10000417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales56051Open in IMG/M
3300006163|Ga0070715_10869546All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300006172|Ga0075018_10099036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1290Open in IMG/M
3300006175|Ga0070712_100043260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3100Open in IMG/M
3300006175|Ga0070712_100224555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1488Open in IMG/M
3300006175|Ga0070712_100434828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1090Open in IMG/M
3300006195|Ga0075366_10673080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria642Open in IMG/M
3300006755|Ga0079222_10151476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1319Open in IMG/M
3300006755|Ga0079222_10390662All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales963Open in IMG/M
3300006755|Ga0079222_10731507All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria791Open in IMG/M
3300006755|Ga0079222_11693675All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales605Open in IMG/M
3300006806|Ga0079220_10842270All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria701Open in IMG/M
3300006914|Ga0075436_100572166All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales831Open in IMG/M
3300006954|Ga0079219_10514552All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales843Open in IMG/M
3300009094|Ga0111539_10003995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales19376Open in IMG/M
3300009156|Ga0111538_13443573Not Available549Open in IMG/M
3300009177|Ga0105248_10706195All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.1138Open in IMG/M
3300009551|Ga0105238_12489175Not Available553Open in IMG/M
3300009792|Ga0126374_10161349Not Available1373Open in IMG/M
3300010043|Ga0126380_10035820All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14622557Open in IMG/M
3300010046|Ga0126384_10922734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.790Open in IMG/M
3300010047|Ga0126382_12361698Not Available515Open in IMG/M
3300010359|Ga0126376_11482058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria706Open in IMG/M
3300010359|Ga0126376_12151074All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria602Open in IMG/M
3300010359|Ga0126376_12327795All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria582Open in IMG/M
3300010361|Ga0126378_10603951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.1211Open in IMG/M
3300010366|Ga0126379_10634246Not Available1157Open in IMG/M
3300010371|Ga0134125_10493582Not Available1356Open in IMG/M
3300010371|Ga0134125_10820186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.1023Open in IMG/M
3300010371|Ga0134125_11010003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.912Open in IMG/M
3300010373|Ga0134128_12888080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria529Open in IMG/M
3300010376|Ga0126381_101756916Not Available896Open in IMG/M
3300012519|Ga0157352_1000568All Organisms → cellular organisms → Bacteria2350Open in IMG/M
3300012882|Ga0157304_1056440All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales619Open in IMG/M
3300012957|Ga0164303_10050559All Organisms → cellular organisms → Bacteria → Proteobacteria1840Open in IMG/M
3300012985|Ga0164308_10655701Not Available900Open in IMG/M
3300013296|Ga0157374_10734117All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1002Open in IMG/M
3300013297|Ga0157378_10215786All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14621822Open in IMG/M
3300013307|Ga0157372_11111028All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300014968|Ga0157379_10573133All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1052Open in IMG/M
3300015200|Ga0173480_10460101Not Available753Open in IMG/M
3300015371|Ga0132258_10551124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2889Open in IMG/M
3300015371|Ga0132258_11537213All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1680Open in IMG/M
3300015371|Ga0132258_12326779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14621343Open in IMG/M
3300015372|Ga0132256_100227284All Organisms → cellular organisms → Bacteria1925Open in IMG/M
3300017927|Ga0187824_10106925Not Available904Open in IMG/M
3300017944|Ga0187786_10046389All Organisms → cellular organisms → Bacteria1291Open in IMG/M
3300017944|Ga0187786_10491010All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860554Open in IMG/M
3300017947|Ga0187785_10134933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14621022Open in IMG/M
3300017974|Ga0187777_10808557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria670Open in IMG/M
3300018089|Ga0187774_10021798All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2542Open in IMG/M
3300018089|Ga0187774_10041202All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14621987Open in IMG/M
3300019356|Ga0173481_10035367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14621633Open in IMG/M
3300021560|Ga0126371_10001238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales21475Open in IMG/M
3300021560|Ga0126371_10244197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1907Open in IMG/M
3300021560|Ga0126371_11281453Not Available867Open in IMG/M
3300021560|Ga0126371_11467875Not Available811Open in IMG/M
3300023072|Ga0247799_1043832All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria732Open in IMG/M
3300025315|Ga0207697_10233899All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales812Open in IMG/M
3300025900|Ga0207710_10020423All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2831Open in IMG/M
3300025906|Ga0207699_11130629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria580Open in IMG/M
3300025907|Ga0207645_10009462All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6737Open in IMG/M
3300025917|Ga0207660_10922823All Organisms → cellular organisms → Bacteria → Proteobacteria712Open in IMG/M
3300025918|Ga0207662_10300249All Organisms → cellular organisms → Bacteria → Proteobacteria1067Open in IMG/M
3300025925|Ga0207650_10244209Not Available1452Open in IMG/M
3300025927|Ga0207687_10461526All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1055Open in IMG/M
3300025930|Ga0207701_11052107All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales676Open in IMG/M
3300025930|Ga0207701_11178366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria632Open in IMG/M
3300025932|Ga0207690_10056515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2648Open in IMG/M
3300025932|Ga0207690_10502669Not Available981Open in IMG/M
3300025936|Ga0207670_10093457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2131Open in IMG/M
3300025941|Ga0207711_11228012Not Available691Open in IMG/M
3300025945|Ga0207679_10438213All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1157Open in IMG/M
3300025972|Ga0207668_10186035All Organisms → cellular organisms → Bacteria → Proteobacteria1642Open in IMG/M
3300025986|Ga0207658_10556896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1026Open in IMG/M
3300026035|Ga0207703_10773783All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300026067|Ga0207678_10427544Not Available1149Open in IMG/M
3300026078|Ga0207702_10167579All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2011Open in IMG/M
3300026088|Ga0207641_10426525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1278Open in IMG/M
3300026304|Ga0209240_1234613All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria558Open in IMG/M
3300027427|Ga0207472_101463All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462907Open in IMG/M
3300027682|Ga0209971_1113838All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales664Open in IMG/M
3300027876|Ga0209974_10381310All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria551Open in IMG/M
3300028381|Ga0268264_10156333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2049Open in IMG/M
3300028381|Ga0268264_11281088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria743Open in IMG/M
3300031231|Ga0170824_111635926All Organisms → cellular organisms → Bacteria → Proteobacteria1215Open in IMG/M
3300031241|Ga0265325_10000025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales111160Open in IMG/M
3300031716|Ga0310813_10002269All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales11681Open in IMG/M
3300031720|Ga0307469_10317760Not Available1291Open in IMG/M
3300031720|Ga0307469_11655371All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria616Open in IMG/M
3300031740|Ga0307468_100441222All Organisms → cellular organisms → Bacteria → Proteobacteria1010Open in IMG/M
3300031943|Ga0310885_10679086Not Available577Open in IMG/M
3300032174|Ga0307470_10020355All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14622973Open in IMG/M
3300032180|Ga0307471_101182036All Organisms → cellular organisms → Bacteria → Proteobacteria929Open in IMG/M
3300032205|Ga0307472_100864521All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales833Open in IMG/M
3300032205|Ga0307472_102737665Not Available504Open in IMG/M
3300032770|Ga0335085_10028706All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7785Open in IMG/M
3300032828|Ga0335080_11178382Not Available771Open in IMG/M
3300033004|Ga0335084_10237465All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1891Open in IMG/M
3300033004|Ga0335084_10257498Not Available1807Open in IMG/M
3300033513|Ga0316628_100246914All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2183Open in IMG/M
3300033513|Ga0316628_100876404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp.1187Open in IMG/M
3300033758|Ga0314868_002626All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300034090|Ga0326723_0425218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales605Open in IMG/M
3300034817|Ga0373948_0019817All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1275Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.59%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil8.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.11%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.11%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.11%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.11%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.11%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.74%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.05%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.05%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.05%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.05%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.05%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.05%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.37%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.37%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.37%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.37%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter1.37%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.68%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.68%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.68%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.68%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.68%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.68%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.68%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.68%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.68%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.68%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459015Litter degradation PV4EngineeredOpen in IMG/M
2170459019Litter degradation MG4EngineeredOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300002906Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cmEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006195Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012882Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300027427Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033758Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_AEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4PV_042924602170459015Switchgrass, Maize And Mischanthus LitterMKTFIVACATAVVIAIVGVMVLNAVPDSAEKAFSSSTSVRLGA
4MG_032567402170459019Switchgrass, Maize And Mischanthus LitterMKAFIMACAAAVAIAVVSVVVLNIVPDSAEHAFSSSTGVRLGA
INPhiseqgaiiFebDRAFT_10310692013300000364SoilMKAFVMACAAAVVIAIVSVVVLNTIPDSAENAFSSSTGVRLGA*
JGI10214J12806_1056058623300000891SoilMFMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST*
JGI24738J21930_1001088443300002075Corn RhizosphereMKAFIIACVAAIVIAVIGGVVLNSVPDSAERAFTSSA
JGI25614J43888_1021037423300002906Grasslands SoilMKTFIVACVAAIVVAVIGGAVLYNVPDSAEKAFSSSTSVRLGA*
Ga0062593_10029675723300004114SoilMKAFIMACVAAIVIAVVGGVALNSMPDSSEKAYTSPTGVRLGA*
Ga0062593_10070836823300004114SoilMKSFIVACAVAIVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA*
Ga0062593_10075728213300004114SoilMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST*
Ga0063356_10292420623300004463Arabidopsis Thaliana RhizosphereMKAFIMACVAAIVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0062595_10008695323300004479SoilMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0062595_10034151823300004479SoilMKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA*
Ga0066395_1051645523300004633Tropical Forest SoilMKTFLMAFAAAIIIAVIGSVVLNSVPGSAENAFSSSTGVRLGA*
Ga0065704_1072045413300005289Switchgrass RhizosphereLNLWVWEDLFMKAFILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGV
Ga0065715_1096074513300005293Miscanthus RhizosphereMKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLT*
Ga0070670_10030224423300005331Switchgrass RhizosphereYGFGRMFMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0066388_10014138523300005332Tropical Forest SoilMKAFIMACAAAVIIAVVGVVVLNSLPDSSEKVFSSSTGVRLGA*
Ga0066388_10015694723300005332Tropical Forest SoilMKTFLMACAVAIVIAVIGGVLLNSVPDSAENAFSSSTGVRLGA*
Ga0066388_10053663123300005332Tropical Forest SoilMKTFLMACAAAIIIAVIGGVLLNSMPDSAENAFSSSTGVRLGA*
Ga0066388_10059010833300005332Tropical Forest SoilMKAFIMACAAAVIIAIIGVVVLNTIPDSAENAFSSSTGVRFGV*
Ga0066388_10090441033300005332Tropical Forest SoilMKAFIMACVAAIVIAVVGGVALNSMPDSSEKAYSSPTGVRLGA*
Ga0066388_10120908813300005332Tropical Forest SoilSSGSRERHDMKTFLMACAAAIIIAVIGSVALNSVPDSSENAFSSSTGVRLGA*
Ga0066388_10263723723300005332Tropical Forest SoilMKAFLMACVVAIIIAVIGGVVLNSVPDSAENSFRSSTGVR*
Ga0066388_10542289623300005332Tropical Forest SoilMKTFLMAFAAAIIIAVIGSVVLNSVPDSAENAFSSSTGVRLGA*
Ga0070674_10217343313300005356Miscanthus RhizosphereVLGEEQVIMKSFIVACVVAVVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA*
Ga0008090_1327087613300005363Tropical Rainforest SoilMKAFIMACVAAVVIAVVSAVALNSVPDSSENAYRSSTGVR
Ga0070659_10014194323300005366Corn RhizosphereMKSFIVACVVAVVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA*
Ga0070713_10018370923300005436Corn, Switchgrass And Miscanthus RhizosphereMTSFIVACAATIVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA*
Ga0070705_10034331623300005440Corn, Switchgrass And Miscanthus RhizosphereMKSFIVACVVAVVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA*
Ga0070685_1096240023300005466Switchgrass RhizosphereMKAFILACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLST*
Ga0070741_10006219223300005529Surface SoilMKAFIIACVVAILIAVVGGVALNSVPDSAERAFTSPTGVSLT*
Ga0070735_1024269523300005534Surface SoilMKSFIAACIIAVVVAVIGGAVLNSVPDTAEKAFSSSTSVRLGA*
Ga0070664_10014579613300005564Corn RhizosphereFMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0068861_10075532623300005719Switchgrass RhizosphereLYSQSLWVREDLFMKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLT*
Ga0066903_10004374753300005764Tropical Forest SoilMKAFIMACVAAVVIAALSAVALNRVPDSSENAYRSSTGVRLGT*
Ga0066903_10022499213300005764Tropical Forest SoilMKTFLMACAAAIIIAVIGGVLLNSVPDSAENAFSSSTG
Ga0066903_10181244123300005764Tropical Forest SoilMKTFLMACVAAIIIAVIGSVALNSVPDSSENAFSSSTGVRLGA*
Ga0066903_10277881123300005764Tropical Forest SoilMKAFVMACAAAVIIAIVGVVVLNKVPDSAENAFSSSTGVRLGA*
Ga0068851_1083174213300005834Corn RhizosphereAFIIACVAAIVIAVIGGVVLNSVPDSAERAFTSSASVSLRT*
Ga0068863_10030006123300005841Switchgrass RhizosphereMKSFIVACAVAIVIAVIGGVVLGTVPDSAEHAFSSASSVRLGA*
Ga0068858_10253258223300005842Switchgrass RhizosphereGFGRMFMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0081455_10000417233300005937Tabebuia Heterophylla RhizosphereMKAFIMACVAAIVIAVIGGVALNSMPDSSEKAYSSPTGVRLGA*
Ga0070715_1086954613300006163Corn, Switchgrass And Miscanthus RhizosphereMTSFIVACPVTIAIAVIGGVVLGSVADSAEHAFSSASSVRLGA*
Ga0075018_1009903623300006172WatershedsMKSFIVACVVAIVIAVIGGVVLGSVPDSAEDAFSSASSVRLGA*
Ga0070712_10004326043300006175Corn, Switchgrass And Miscanthus RhizosphereMKAFVMACAAAVVIAIVGVVVLNTIPDSAERAFSSSTGVRLGA*
Ga0070712_10022455523300006175Corn, Switchgrass And Miscanthus RhizosphereMKSFIVACALAIVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA*
Ga0070712_10043482823300006175Corn, Switchgrass And Miscanthus RhizosphereMKTFLVACAAAVVIAIVSVMVLNAVPDSAEKAFSSATSVRLGA*
Ga0075366_1067308013300006195Populus EndosphereILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0079222_1015147623300006755Agricultural SoilMKAFIMACAAAVAIAVVSVVVLNIVPDSAEHAFSSSTGVRLGA*
Ga0079222_1039066213300006755Agricultural SoilMKAFIMACAAAVIIAVVGVVALNSVPDSAEKAFTSPTSVSLT*
Ga0079222_1073150723300006755Agricultural SoilMKAFIMACAAAIVIAIISVAVLNAVPDSAENAFSSSTGVRLGA*
Ga0079222_1169367523300006755Agricultural SoilMKAFIMACVAAIVIAVIGLVALNRVPDSAEKAFSSPTGVSLDT*
Ga0079220_1084227023300006806Agricultural SoilMACAAAIVIAIISVAVLNAVPDSAENAFSSSTGVRLGA*
Ga0075436_10057216613300006914Populus RhizosphereMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGV
Ga0079219_1051455223300006954Agricultural SoilMKAFIMACAAAIIIAVISVVALNSVPDSAEKAFSSPTGVSLT*
Ga0111539_1000399543300009094Populus RhizosphereMFMKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA*
Ga0111538_1344357313300009156Populus RhizosphereMKAFIMACVAAIVIAVVGGVALNSVPDSSEKAYTSPTGVRLGA*
Ga0105248_1070619523300009177Switchgrass RhizosphereMFMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT*
Ga0105238_1248917523300009551Corn RhizosphereAFILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0126374_1016134923300009792Tropical Forest SoilAAAIIIAVIGSVVLNSVPDSAENAFSSSTGVRLGA*
Ga0126380_1003582033300010043Tropical Forest SoilMKTFLMACAAAIIIAVIGGVLLNSVPDSAENAFSSSTGVRLGA*
Ga0126384_1092273423300010046Tropical Forest SoilMKTFLMACAAAIIIAVIGSVALNSVPDSSENAFSSSTGVRLGA*
Ga0126382_1236169823300010047Tropical Forest SoilAYGFGRKTMKAFIMACVAAIVIAVVGGVALNSMPDSSEKAYSSPTGVRLGA*
Ga0126376_1148205813300010359Tropical Forest SoilLMACAAAIIIAVIGSVALNSVPDSSENAFSSSTGVRLGA*
Ga0126376_1215107423300010359Tropical Forest SoilVACITAIVLAVIGSVVLNSVPDSSEKAFSSSTGVRLGA*
Ga0126376_1232779523300010359Tropical Forest SoilMKAFIMACAAAVIIAVVGVVALNSVPDSAEKAFTSPTGVSLT*
Ga0126378_1060395123300010361Tropical Forest SoilMKAFVMACAAAVVIAIVGVVVLNKVPDSAENAFSSSTGVRLGA*
Ga0126379_1063424623300010366Tropical Forest SoilFSERDNMKTFLMACAAAIIIAVIGGVLLNSVPDSAENAFSSSTGVRLGA*
Ga0134125_1049358223300010371Terrestrial SoilMKAFIVACVAAIVIAVIGGVVLNSVPDSAERAFTSSASVSLRT*
Ga0134125_1082018623300010371Terrestrial SoilMKAFIMACAAAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLT*
Ga0134125_1101000323300010371Terrestrial SoilMKAFIMACVVAIVIAVVGGVALNSVPDSAERAFTSSASVSLRS*
Ga0134128_1288808023300010373Terrestrial SoilLWVWEDLFMKAFIMACAAAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLT*
Ga0126381_10175691613300010376Tropical Forest SoilMKAFLIACAAAIVIAVIGSVALNSVPDSSENAFSSSTGV
Ga0157352_100056813300012519Unplanted SoilFILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0157304_105644023300012882SoilMFMKAFIMACVVAVVIAVFGVVALNSVPDSAEKAFSSPTGVSLST*
Ga0164303_1005055933300012957SoilMKTFIVACATAVVIAIVGVMVLNAVPDSAEKAFSSSTSVRLGA*
Ga0164308_1065570113300012985SoilAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0157374_1073411713300013296Miscanthus RhizosphereMKSFIVACVVAVVIAVIGGVVLGSVPDSAEHAFSS
Ga0157378_1021578623300013297Miscanthus RhizosphereMKSFIVACAVAIVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA*
Ga0157372_1111102823300013307Corn RhizosphereGFGRMFMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST*
Ga0157379_1057313313300014968Switchgrass RhizosphereMFMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPT
Ga0173480_1046010123300015200SoilAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA*
Ga0132258_1055112443300015371Arabidopsis RhizosphereMKAFVMACAAAVVIAIVGVVVLNTIPDSAENAFSSSTGVRLGA*
Ga0132258_1153721333300015371Arabidopsis RhizosphereMKAFIMACAAAIVIAVVGGVALNSVPDSAQKAFTSSTGVRLGA*
Ga0132258_1232677923300015371Arabidopsis RhizosphereMKSFIVACVVAIVIAVIGGVVLGSVPDSAEDAFSSSSSVRLGA*
Ga0132256_10022728413300015372Arabidopsis RhizosphereVMACAAAVIIAIVGVVVLNTIPDSAENAFSSSTGVRLGA*
Ga0187824_1010692523300017927Freshwater SedimentMKMFIMACVAAIVIAVIGGVALNSAQETVAKAFSSPTSVDLGA
Ga0187786_1004638923300017944Tropical PeatlandMKSFIVACVIAIVIAVIGGAVLSSVPDTAEKAFSSSTSVRLGA
Ga0187786_1049101023300017944Tropical PeatlandMKSFLVACVAAIILAVIGGVVLSSVPDTAEKAFSSSTGVRLGA
Ga0187785_1013493323300017947Tropical PeatlandMKSFLVACVAAIIIAVIGGVVLSSVPDTAEKAFSSSTGVRLGA
Ga0187777_1080855723300017974Tropical PeatlandMKAFVMACAAAVVIAIVGVVVLNTIPDSAEHEFSSSTGVRLGA
Ga0187774_1002179813300018089Tropical PeatlandACVAAVIIAIVGVVVLNTIPDSAENAFSSSTGVRLGA
Ga0187774_1004120223300018089Tropical PeatlandMKTFIMACVAAIVIAVIGGVVLNSVPDSAQNAFSSSASVRLGA
Ga0173481_1003536723300019356SoilMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST
Ga0126371_10001238163300021560Tropical Forest SoilMKTFLMACAAAIIIAVIGGVLLNSVPDSAENAFSSSTGVRLGA
Ga0126371_1024419713300021560Tropical Forest SoilMKAFIMACVAAVVIAVVSAVALNIVPDSSENAYRSSTGVRLGT
Ga0126371_1128145313300021560Tropical Forest SoilMKAFLMACVVAIIIAVIGGVVLNSVPDSAENSFRSSTGVR
Ga0126371_1146787523300021560Tropical Forest SoilMKAFIMACAAAVIIAIIGVVVLNTIPDSAENAFSSSTGVRFGV
Ga0247799_104383223300023072SoilMKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA
Ga0207697_1023389923300025315Corn, Switchgrass And Miscanthus RhizosphereMKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA
Ga0207710_1002042323300025900Switchgrass RhizosphereMRSFIVACAVAIVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA
Ga0207699_1113062913300025906Corn, Switchgrass And Miscanthus RhizosphereMKAFVMACAAAVVIAIVGVVVLNTIPDSAERAFSSSTGVRL
Ga0207645_1000946263300025907Miscanthus RhizosphereMKSFIVACVVAVVIAGIGGVVLGSVPDTAEDAFSSASSVRLGA
Ga0207660_1092282323300025917Corn RhizosphereMKAFIMACVAAVVIAVVGGVVLNSMPDSSEKAYTSPTG
Ga0207662_1030024913300025918Switchgrass RhizosphereCAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA
Ga0207650_1024420923300025925Switchgrass RhizosphereMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT
Ga0207687_1046152623300025927Miscanthus RhizosphereVVAVVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA
Ga0207701_1105210723300025930Corn, Switchgrass And Miscanthus RhizosphereMKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLG
Ga0207701_1117836613300025930Corn, Switchgrass And Miscanthus RhizosphereRARILYSESLWVREDLFMKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLT
Ga0207690_1005651543300025932Corn RhizosphereMKSFIVACVVAVVIAVIGGVVLGSVPDSAEHAFSSASSVRLGA
Ga0207690_1050266923300025932Corn RhizosphereMKAFIMACVAAVVIAVIGVVALNRVPYSAEKAFSSPTGVSLDT
Ga0207670_1009345713300025936Switchgrass RhizosphereMKAFVMACVAAIVIAVVGGVGLNSVPDSSSKAYSSPTGVRLGA
Ga0207711_1122801213300025941Switchgrass RhizosphereAYGFGRMFMKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA
Ga0207679_1043821323300025945Corn RhizosphereMFMKAFVMACVAAIVIAVVGGVALNSVPDSSSKAYSSPTGVRLGA
Ga0207668_1018603513300025972Switchgrass RhizosphereILACAAAIVIAVVGGVALNSVPDSAEKAFTSSTGVRLGA
Ga0207658_1055689633300025986Switchgrass RhizosphereMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLT
Ga0207703_1077378333300026035Switchgrass RhizosphereGFGRMFMKAFIMACVAAVVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT
Ga0207678_1042754413300026067Corn RhizosphereFIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLDT
Ga0207702_1016757913300026078Corn RhizosphereMKSFIVACVVAVVIAVIGGVVLGSVPDTAEDAFSSASSV
Ga0207641_1042652523300026088Switchgrass RhizosphereMKSFIVACAVAIVIAVIGGVVLGTVPDSAEHAFSSASSVRLGA
Ga0209240_123461323300026304Grasslands SoilMKTFIVACVAAIVVAVIGGAVLYNVPDSAEKAFSSSTSVRLGA
Ga0207472_10146323300027427SoilMKAFIMACVAAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST
Ga0209971_111383823300027682Arabidopsis Thaliana RhizosphereMKAFIMACVAAVVIAVIGVVVLNRVPDSAEKAFSSPTGVSLDT
Ga0209974_1038131013300027876Arabidopsis Thaliana RhizosphereFMKAFIMACVAAIVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT
Ga0268264_1015633333300028381Switchgrass RhizosphereMKSFIVACVVAVVIAVIGGVVLGSVPDTAEDAFSSASSVRLGA
Ga0268264_1128108823300028381Switchgrass RhizosphereMKAFIIACAAAIVIAVVGGVALNSVPDSAEKAFSSPTGVSLT
Ga0170824_11163592623300031231Forest SoilMKAFIIACAAAIVIAVLGSVVLNSVPGSAEEAFSSSTGVRLGA
Ga0265325_10000025293300031241RhizosphereMKSFIVACVIAVVLAVIGGVVLNSVPDSAEKTFSSSTGVRLGA
Ga0310813_10002269123300031716SoilMKAFIMACVAAIVIAVIGVVALNRVPDSAEKAFSSPTGVSLDT
Ga0307469_1031776033300031720Hardwood Forest SoilMKSFIVACVVAIVIAVIGGVVLGSVPDSAEDAFSSASSVRLGA
Ga0307469_1165537113300031720Hardwood Forest SoilLGEEQAIMTSFIVACPVTIAIAVIGGVVLGSVADSAEHAFSSASSVRLGA
Ga0307468_10044122223300031740Hardwood Forest SoilMKAFIMACVAAIVIAVVGGVALNSMPDSSEKAYTSPTGVRLGA
Ga0310885_1067908613300031943SoilMKAFVMACVAAIVIAVVGGVALNRVPDSAEKAFSSPTGVSLDT
Ga0307470_1002035533300032174Hardwood Forest SoilMKSFIVACVVAVVIAVIGGVVLGSVPDTAEDVFTSASSVRLGA
Ga0307471_10118203623300032180Hardwood Forest SoilMKAFVMACAAAVVIAIVGVVVLNTIPDSAESAFSSSTGVRLGA
Ga0307472_10086452123300032205Hardwood Forest SoilMKPFIVACVAAIVIAVVGGVALNRVPDSAENAFSSATGVRLGT
Ga0307472_10273766523300032205Hardwood Forest SoilIPMKAFVMACAAAVVIAIVGLVVLNTIPDSAEHEFSSSTGVRLGA
Ga0335085_1002870633300032770SoilMKSFLVACVAAIIIAVIGVVALGSVPDSAESVFSSSTGVRLGA
Ga0335080_1117838213300032828SoilMKAFVMACAAAVVIAIVGVVVLNAIPDSAEHAFSSSTGVRLGA
Ga0335084_1023746523300033004SoilMKTFIVACITAIVLAVIGGAVLNSVPDTAEKAFSSSTGVRLGA
Ga0335084_1025749833300033004SoilMKSFLVACVAAIIIAVIGIVALGSVPDSAESVFSSSTGVRLGA
Ga0316628_10024691423300033513SoilMKAFIMACVAAIVIAVIGGVALNSVPDSAEKAFSSSTGVHFGA
Ga0316628_10087640423300033513SoilMKVFIMASVAAIVIAVIGVVALNSVPDSAEKAFSSSTGVRLGA
Ga0314868_002626_466_5973300033758PeatlandMKTFIVACVAAIIIAVVGGVALNNVPDTAEKAFSSSTGVRLGA
Ga0326723_0425218_216_3473300034090Peat SoilMKTFIMACVAAIVIAVIGGVVLNSVPDSAENAFSSSASVRLGA
Ga0373948_0019817_888_10253300034817Rhizosphere SoilMFMKAFIMACVVAVVIAVVGVVALNSVPDSAEKAFSSPTGVSLST


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.