Metagenome / Metatranscriptome Family F049912

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049912
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	58 residues
Representative Sequence	MRVLLLLTALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Number of Associated Samples	108
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.40 %
% of genes near scaffold ends (potentially truncated)	34.93 %
% of genes from short scaffolds (< 2000 bps)	87.67 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.123 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.288 % of family members)
Environment Ontology (ENVO)	Unclassified (43.836 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.959 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.34% β-sheet: 0.00% Coil/Unstructured: 39.66%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF04392	ABC_sub_bind	3.42
PF03401	TctC	2.05
PF00903	Glyoxalase	2.05
PF00239	Resolvase	2.05
PF13676	TIR_2	2.05
PF00144	Beta-lactamase	1.37
PF03466	LysR_substrate	1.37
PF03734	YkuD	1.37
PF01131	Topoisom_bac	0.68
PF07813	LTXXQ	0.68
PF13742	tRNA_anti_2	0.68
PF00324	AA_permease	0.68
PF04828	GFA	0.68
PF12681	Glyoxalase_2	0.68
PF14415	DUF4424	0.68
PF13936	HTH_38	0.68
PF13508	Acetyltransf_7	0.68
PF12840	HTH_20	0.68
PF02518	HATPase_c	0.68
PF07110	EthD	0.68
PF00355	Rieske	0.68
PF02668	TauD	0.68
PF02371	Transposase_20	0.68
PF05050	Methyltransf_21	0.68
PF04461	DUF520	0.68
PF00596	Aldolase_II	0.68
PF14494	DUF4436	0.68
PF00583	Acetyltransf_1	0.68
PF00501	AMP-binding	0.68
PF13362	Toprim_3	0.68
PF03976	PPK2	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.42
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.74
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.05
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.05
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.05
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.37
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.37
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.37
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.37
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.37
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.68
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.68
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.68
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.68
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.68
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	0.68
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.68
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.68
COG1110	Reverse gyrase	Replication, recombination and repair [L]	0.68
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.68
COG0550	DNA topoisomerase IA	Replication, recombination and repair [L]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.12 %
Unclassified	root	N/A	32.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.12 %
Unclassified	root	N/A	32.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.12 %
Unclassified	root	N/A	32.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.37 %
Unclassified	root	N/A	32.88 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.37 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46.58 %
Unclassified	root	N/A	32.88 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.37 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.37 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22.60 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.70 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.37 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	0.68 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.96 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	2.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.37 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.68 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.59 %
Methylopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila	2.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.37 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.68 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.68 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.11 %
unclassified Methylopila	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila	2.74 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.37 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.37 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.68 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.68 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.70 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	3.42 %
Methylopila sp. 73B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. 73B	2.74 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.37 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.37 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.68 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.68 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	0.68 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig804738	Not Available	513	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1076018	Not Available	591	Open in IMG/M
3300001867\|JGI12627J18819_10206705	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300002911\|JGI25390J43892_10024036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1469	Open in IMG/M
3300002917\|JGI25616J43925_10119025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1076	Open in IMG/M
3300004267\|Ga0066396_10002341	Not Available	1807	Open in IMG/M
3300004267\|Ga0066396_10102268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. 73B	531	Open in IMG/M
3300004479\|Ga0062595_100161463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1323	Open in IMG/M
3300004633\|Ga0066395_10066748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1643	Open in IMG/M
3300005332\|Ga0066388_100052626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4206	Open in IMG/M
3300005332\|Ga0066388_100121626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	3134	Open in IMG/M
3300005332\|Ga0066388_101874338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1069	Open in IMG/M
3300005332\|Ga0066388_102690187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	908	Open in IMG/M
3300005363\|Ga0008090_10039411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2035	Open in IMG/M
3300005363\|Ga0008090_10181812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. 73B	728	Open in IMG/M
3300005363\|Ga0008090_15771742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. 73B	524	Open in IMG/M
3300005406\|Ga0070703_10032673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1582	Open in IMG/M
3300005439\|Ga0070711_101585089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylopila → unclassified Methylopila → Methylopila sp. 73B	572	Open in IMG/M
3300005518\|Ga0070699_100130806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2212	Open in IMG/M
3300005713\|Ga0066905_100116475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1853	Open in IMG/M
3300005713\|Ga0066905_100171186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1590	Open in IMG/M
3300005713\|Ga0066905_100740204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	847	Open in IMG/M
3300005764\|Ga0066903_100326027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2457	Open in IMG/M
3300005764\|Ga0066903_100798487	Not Available	1687	Open in IMG/M
3300005764\|Ga0066903_101658052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1215	Open in IMG/M
3300005764\|Ga0066903_102804879	Not Available	945	Open in IMG/M
3300005764\|Ga0066903_106988495	Not Available	585	Open in IMG/M
3300005764\|Ga0066903_108363382	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005983\|Ga0081540_1164954	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300006172\|Ga0075018_10041257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1885	Open in IMG/M
3300006175\|Ga0070712_101747149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300006175\|Ga0070712_101771913	Not Available	541	Open in IMG/M
3300006604\|Ga0074060_12051968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	680	Open in IMG/M
3300006755\|Ga0079222_10370277	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300006796\|Ga0066665_10090542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2222	Open in IMG/M
3300006804\|Ga0079221_10202079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1090	Open in IMG/M
3300006854\|Ga0075425_100075932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3793	Open in IMG/M
3300006903\|Ga0075426_10723680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300006904\|Ga0075424_101885315	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300006953\|Ga0074063_14038639	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300009090\|Ga0099827_10257729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1467	Open in IMG/M
3300009147\|Ga0114129_11655167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300009162\|Ga0075423_10467578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1326	Open in IMG/M
3300009792\|Ga0126374_10160621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1375	Open in IMG/M
3300010043\|Ga0126380_10217146	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300010043\|Ga0126380_10494721	Not Available	937	Open in IMG/M
3300010046\|Ga0126384_10075279	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300010046\|Ga0126384_10223109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1506	Open in IMG/M
3300010047\|Ga0126382_11347978	Not Available	648	Open in IMG/M
3300010047\|Ga0126382_11498840	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300010048\|Ga0126373_10767221	Not Available	1025	Open in IMG/M
3300010048\|Ga0126373_11255894	Not Available	807	Open in IMG/M
3300010358\|Ga0126370_10192693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300010358\|Ga0126370_10318089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1243	Open in IMG/M
3300010358\|Ga0126370_10367132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300010359\|Ga0126376_13052260	Not Available	518	Open in IMG/M
3300010360\|Ga0126372_10362668	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300010361\|Ga0126378_10241542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1897	Open in IMG/M
3300010361\|Ga0126378_11494003	Not Available	766	Open in IMG/M
3300010366\|Ga0126379_12072546	Not Available	671	Open in IMG/M
3300010366\|Ga0126379_12479601	Not Available	617	Open in IMG/M
3300010376\|Ga0126381_100022514	All Organisms → cellular organisms → Bacteria → Proteobacteria	7411	Open in IMG/M
3300010376\|Ga0126381_100983678	Not Available	1217	Open in IMG/M
3300010398\|Ga0126383_10068196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3045	Open in IMG/M
3300010398\|Ga0126383_10097299	All Organisms → cellular organisms → Bacteria → Proteobacteria	2619	Open in IMG/M
3300010398\|Ga0126383_10461681	Not Available	1321	Open in IMG/M
3300010863\|Ga0124850_1002166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5686	Open in IMG/M
3300010868\|Ga0124844_1034187	Not Available	1656	Open in IMG/M
3300011106\|Ga0151489_1415221	Not Available	712	Open in IMG/M
3300012096\|Ga0137389_10135589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2000	Open in IMG/M
3300012180\|Ga0153974_1088731	Not Available	696	Open in IMG/M
3300012202\|Ga0137363_11057185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300012205\|Ga0137362_10337174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1305	Open in IMG/M
3300012359\|Ga0137385_10545201	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300012362\|Ga0137361_10729379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	904	Open in IMG/M
3300012923\|Ga0137359_10482200	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300012930\|Ga0137407_11035290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300012948\|Ga0126375_11737830	Not Available	542	Open in IMG/M
3300012957\|Ga0164303_10168777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1179	Open in IMG/M
3300012960\|Ga0164301_11391400	Not Available	573	Open in IMG/M
3300012961\|Ga0164302_11629944	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300012971\|Ga0126369_10371693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1459	Open in IMG/M
3300012971\|Ga0126369_11714521	Not Available	717	Open in IMG/M
3300012986\|Ga0164304_10403827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	971	Open in IMG/M
3300015371\|Ga0132258_11517767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1692	Open in IMG/M
3300015373\|Ga0132257_102604458	Not Available	658	Open in IMG/M
3300016294\|Ga0182041_10363671	Not Available	1220	Open in IMG/M
3300016319\|Ga0182033_10252813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1433	Open in IMG/M
3300016341\|Ga0182035_10217192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1523	Open in IMG/M
3300016387\|Ga0182040_10058829	All Organisms → cellular organisms → Bacteria	2433	Open in IMG/M
3300020579\|Ga0210407_10471081	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	982	Open in IMG/M
3300021168\|Ga0210406_10839124	Not Available	696	Open in IMG/M
3300021168\|Ga0210406_11106717	Not Available	583	Open in IMG/M
3300021361\|Ga0213872_10150149	Not Available	1018	Open in IMG/M
3300021478\|Ga0210402_10462156	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300021560\|Ga0126371_11000957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	978	Open in IMG/M
3300021560\|Ga0126371_11426561	Not Available	823	Open in IMG/M
3300021560\|Ga0126371_11455029	Not Available	815	Open in IMG/M
3300021560\|Ga0126371_11959468	Not Available	704	Open in IMG/M
3300021560\|Ga0126371_13574007	Not Available	525	Open in IMG/M
3300022726\|Ga0242654_10173515	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	735	Open in IMG/M
3300025915\|Ga0207693_10648300	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300025939\|Ga0207665_10543930	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300026304\|Ga0209240_1101141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1031	Open in IMG/M
3300026319\|Ga0209647_1269088	Not Available	570	Open in IMG/M
3300026326\|Ga0209801_1058714	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300027502\|Ga0209622_1013462	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300027527\|Ga0209684_1015233	Not Available	1202	Open in IMG/M
3300027654\|Ga0209799_1103111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300029636\|Ga0222749_10086348	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300031543\|Ga0318516_10086850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1752	Open in IMG/M
3300031543\|Ga0318516_10096703	Not Available	1665	Open in IMG/M
3300031543\|Ga0318516_10343788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	861	Open in IMG/M
3300031543\|Ga0318516_10832660	Not Available	520	Open in IMG/M
3300031544\|Ga0318534_10048087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2383	Open in IMG/M
3300031545\|Ga0318541_10235441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1016	Open in IMG/M
3300031564\|Ga0318573_10455630	Not Available	688	Open in IMG/M
3300031573\|Ga0310915_11224980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	518	Open in IMG/M
3300031724\|Ga0318500_10023449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2389	Open in IMG/M
3300031771\|Ga0318546_10229083	Not Available	1275	Open in IMG/M
3300031771\|Ga0318546_10656634	Not Available	738	Open in IMG/M
3300031771\|Ga0318546_11020069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	582	Open in IMG/M
3300031777\|Ga0318543_10195812	Not Available	896	Open in IMG/M
3300031795\|Ga0318557_10219885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	868	Open in IMG/M
3300031797\|Ga0318550_10131206	Not Available	1197	Open in IMG/M
3300031798\|Ga0318523_10379957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	702	Open in IMG/M
3300031880\|Ga0318544_10216630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	739	Open in IMG/M
3300031880\|Ga0318544_10293981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300031890\|Ga0306925_10280515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1793	Open in IMG/M
3300031910\|Ga0306923_11028583	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300031912\|Ga0306921_10476745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1452	Open in IMG/M
3300031941\|Ga0310912_10027324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3842	Open in IMG/M
3300031945\|Ga0310913_11313252	Not Available	501	Open in IMG/M
3300031959\|Ga0318530_10033220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1862	Open in IMG/M
3300032025\|Ga0318507_10021509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	2297	Open in IMG/M
3300032035\|Ga0310911_10121547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1450	Open in IMG/M
3300032041\|Ga0318549_10432965	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	592	Open in IMG/M
3300032042\|Ga0318545_10248232	Not Available	639	Open in IMG/M
3300032052\|Ga0318506_10297469	Not Available	716	Open in IMG/M
3300032060\|Ga0318505_10327584	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300032076\|Ga0306924_11631308	Not Available	678	Open in IMG/M
3300032180\|Ga0307471_101279274	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300032180\|Ga0307471_102743198	Not Available	625	Open in IMG/M
3300032205\|Ga0307472_102687318	Not Available	508	Open in IMG/M
3300032261\|Ga0306920_103240799	Not Available	608	Open in IMG/M
3300033290\|Ga0318519_10198141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1144	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.15%
Host-Associated	Host-Associated	6.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.47%
Plants	Host-Associated → Plants	6.16%
Aquatic	Environmental → Aquatic	0.68%
Fungi	Host-Associated → Fungi	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.05%
Sediment	Environmental → Aquatic → Sediment	0.68%
Mycelium	Host-Associated → Fungi → Mycelium	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.60%
Loam	Environmental → Terrestrial → Soil → Loam	19.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.05%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.05%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.37%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_11710860	2124908045	Soil	MRVLLLLTALGLAGCADTFARRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
AF_2010_repII_A100DRAFT_10760182	3300000655	Forest Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRTTLKEKRNGVVTVRVR*
JGI12627J18819_102067052	3300001867	Forest Soil	MRVLLLLTALGLAGCADTFAARDDATCRAMGAQRGTDRYDDCRLALKEKRNGVVTVRVR*
JGI25390J43892_100240361	3300002911	Grasslands Soil	MRVLLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
JGI25616J43925_101190252	3300002917	Grasslands Soil	MRILLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0066396_100023411	3300004267	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCRAMGAQRGTDRYDNCRMILKENRNSVVTVRVR*
Ga0066396_101022681	3300004267	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCLAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0062595_1001614632	3300004479	Soil	MRVLLLLTALGLAGCADTFATRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0066395_100667482	3300004633	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFASRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0066388_1000526261	3300005332	Tropical Forest Soil	LLLLTALGLAGCVDTFARRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0066388_1001216263	3300005332	Tropical Forest Soil	MRALLLLLALALGGCAFNARLDDAKCREMGAAPGTGRYDNCRMALQEKRNGVVTVRVR*
Ga0066388_1018743382	3300005332	Tropical Forest Soil	MRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0066388_1026901872	3300005332	Tropical Forest Soil	MRVLLLLTALGLAGCADTFAARDDATCRAMGAQRGTDRYDNCRMTLKEKRNGV
Ga0008090_100394112	3300005363	Tropical Rainforest Soil	MRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRV
Ga0008090_101818121	3300005363	Tropical Rainforest Soil	MRLLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRTTLKEKRNGVITVRVR*
Ga0008090_157717421	3300005363	Tropical Rainforest Soil	LRERDMRVLLLLIALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRTTLKENRNGVITVRVR*
Ga0070703_100326733	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRILLLLTALGLAGCADTFATRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0070711_1015850891	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRALLLLLALALGGCAFNARLDDAKCREMGAAPGTARYDNCRMTLQEKRNGVVTVRVER*
Ga0070699_1001308063	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLLLLTALGLAGCVDTFARRDDAKCRDMGAQRGTDRYDKCRMTLKENRNGVVTVRVR*
Ga0066905_1001164753	3300005713	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFAGRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTLRVER
Ga0066905_1001711863	3300005713	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0066905_1007402042	3300005713	Tropical Forest Soil	MRVLLLLTALGLAGCADTFARRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0066903_1003260271	3300005764	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFATRDDANCRAMGAQRGTDRYDNCRMTLKEKRNGVVTVRVR*
Ga0066903_1007984874	3300005764	Tropical Forest Soil	MRVLLLLTALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0066903_1016580523	3300005764	Tropical Forest Soil	MRLLLLLAALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRTTLKEKRNGVITVRVR*
Ga0066903_1028048794	3300005764	Tropical Forest Soil	DMRVLLLLTALGLAGCDTFAPRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVITVRVR*
Ga0066903_1069884952	3300005764	Tropical Forest Soil	MRLLLLLTALGLAGCDTFATRDDAKCRAMGAQRNTDRYDNCRTTLKEKRNGVITVRVR*
Ga0066903_1083633821	3300005764	Tropical Forest Soil	VLLLLTALGLAGCADTFAARDDAKCRAMGAQRGTDRYDDCRMALKENRNGVITVRVR*
Ga0081540_11649541	3300005983	Tabebuia Heterophylla Rhizosphere	MRVLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0075018_100412573	3300006172	Watersheds	MRVLLLCVALGLAGCVDTFARRDDAKCRDMGAQRGTDRYDKCRMTLKENRNGVVTVRVR*
Ga0070712_1017471492	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLLLLTALGLAGCADTFASRDDATCRAVGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0070712_1017719131	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRALLLLLALALGGCAFNARLDDAKCREMGAAPDTARYDNCRMTLQEKRNGVVTVRVER*
Ga0074060_120519681	3300006604	Soil	MRVLLLLTALGLAGCADTFAARDDAKCRAMGAQRGTDRYDDCRLALKENRNGVVTV
Ga0079222_103702772	3300006755	Agricultural Soil	MRVLLLLTALGLAGCVDTFARRDDAKCRDMGAQRGTDRYDNCRMTLKENRNGVITVRVR*
Ga0066665_100905426	3300006796	Soil	MRVLLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRN
Ga0079221_102020793	3300006804	Agricultural Soil	MRVLLLLTALGLAGCADTFASRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVITVRV
Ga0075425_1000759322	3300006854	Populus Rhizosphere	MRVLLLLTALGLAGCADTFASRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0075426_107236802	3300006903	Populus Rhizosphere	MRVLLLLTALGLAGCADTFASRDDAKCRAMGAQRGTDRYDNRRMALKENRNGVITVRVER
Ga0075424_1018853152	3300006904	Populus Rhizosphere	MRVLLLLTALGLAGCADTFAARDDATCRAMSAQRGTDRYDDCRLALKEKRNGVVSVRVR*
Ga0074063_140386393	3300006953	Soil	MRVLLLLTALGLAGCADTFAARDDAKCRAMGAQRGTDRYDDCRMALKENRNGVI
Ga0099827_102577291	3300009090	Vadose Zone Soil	MRVLLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVGVR*
Ga0114129_116551672	3300009147	Populus Rhizosphere	MRVLLLLTALGLAGCADTFASRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVI
Ga0075423_104675782	3300009162	Populus Rhizosphere	MRVLLLLTALGLAGCADTFASRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVITVRVER
Ga0126374_101606212	3300009792	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCLAMGAQRGTDRYDNCRMTLKENRNGVVTVRLR*
Ga0126380_102171462	3300010043	Tropical Forest Soil	MRILLLLTALGLAGCADTFARRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRIER
Ga0126380_104947212	3300010043	Tropical Forest Soil	LLLLTALGLAGCVDTFGRRDDARCRDMGAQRGTERYDNCSVTLKENRNSVVTVRVR*
Ga0126384_100752794	3300010046	Tropical Forest Soil	GEMRVLLLLTALGLAGCVDTFARRDDAKCLAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0126384_102231091	3300010046	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCLAMGAQRGTDRYDNCRMTLKENRNGVV
Ga0126382_113479781	3300010047	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCRAMGAQRGADRYDNCRMILKENRNSVVTVRVR*
Ga0126382_114988401	3300010047	Tropical Forest Soil	MRVLLLLTALSLAGCVDTFARRDDAKCLAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0126373_107672213	3300010048	Tropical Forest Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVITVRVR*
Ga0126373_112558942	3300010048	Tropical Forest Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRTTLKEKRNGVITVRVR*
Ga0126370_101926931	3300010358	Tropical Forest Soil	RVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0126370_103180891	3300010358	Tropical Forest Soil	MRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVR
Ga0126370_103671322	3300010358	Tropical Forest Soil	MRVLLLLIALGLVGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKEKRNGVVTVRVR*
Ga0126376_130522601	3300010359	Tropical Forest Soil	MRVLLLLTALGLAGCADTFAARDDAKCRAMGAQRGTDRYDDCRMALKENRNGVITVRVR*
Ga0126372_103626682	3300010360	Tropical Forest Soil	MRLLLLLTALGLAGCADTFAARDDAKCRAMGAQRGTDRYDDCRMALKENRNGVITVRVR*
Ga0126378_102415421	3300010361	Tropical Forest Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRTTLKEKRNGVITVR
Ga0126378_114940031	3300010361	Tropical Forest Soil	MRVLLLLIALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRTTLKENRNGVITVRVR*
Ga0126379_120725461	3300010366	Tropical Forest Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0126379_124796011	3300010366	Tropical Forest Soil	MRVLLLLTALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRV
Ga0126381_1000225147	3300010376	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCRAMGAQRGTDRYDNCRVTLKENRNSVVTVRVR*
Ga0126381_1009836783	3300010376	Tropical Forest Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRALGAQRGTDRYDNCRMTLKENRKGVITVRVR*
Ga0126383_100681964	3300010398	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCRAMGAQRGTDRYDNCRMTLKENRNSVVTVRVR*
Ga0126383_100972993	3300010398	Tropical Forest Soil	MRVLLLLTALGLAGCADTFAARDDAKCRAMGAQRGTDRYDDCRLALKEKRNGVVTLRLER
Ga0126383_104616811	3300010398	Tropical Forest Soil	MRVLLLLTALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVMVR*
Ga0124850_10021662	3300010863	Tropical Forest Soil	MRLLLLLTALGLAGCADTFAARDDAKCRAMGAQRGTDRYDDCRMALKENRNGVINVRVR*
Ga0124844_10341874	3300010868	Tropical Forest Soil	MQVLLLLTALGLAGCVDTFARRDDAKCRAMGAQRGTDRYDNCRMILKENRNSVVTVRVR*
Ga0151489_14152212	3300011106	Soil	MRVLLLLLTALGLAGCADTFATRDDAKCRAMGAQRGTDRYDDCRLALKENRNGVITLRVER*
Ga0137389_101355891	3300012096	Vadose Zone Soil	MRVLLLLTALSLAGCADTFATRDDAKCRDKGAQSGTDRYDNCRMTLKENRNGVITLRVER
Ga0153974_10887312	3300012180	Attine Ant Fungus Gardens	MRVLLLLTALGLAGCADTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0137363_110571851	3300012202	Vadose Zone Soil	MRVLLLLTALSLAGCADTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGV
Ga0137362_103371742	3300012205	Vadose Zone Soil	MRVLLLLTALSLAGCADTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVITLRVER
Ga0137385_105452011	3300012359	Vadose Zone Soil	ALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0137361_107293791	3300012362	Vadose Zone Soil	LLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0137359_104822001	3300012923	Vadose Zone Soil	LLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0137407_110352902	3300012930	Vadose Zone Soil	MRVLLLLTALSLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0126375_117378302	3300012948	Tropical Forest Soil	IALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVRQE*
Ga0164303_101687773	3300012957	Soil	MRVLLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVS*
Ga0164301_113914002	3300012960	Soil	MRVLLLLLTALGLAGCADTFAGRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0164302_116299441	3300012961	Soil	ALLLLLALALGGCPINAKINDAKCREMGAAPGTARYDNCRMTLQEKRNGVVTVSVER*
Ga0126369_103716933	3300012971	Tropical Forest Soil	MRVLLLLIALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0126369_117145213	3300012971	Tropical Forest Soil	EGDMRVLLLLTALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0164304_104038272	3300012986	Soil	MRVLLLLTALGLAGCADTFAGRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR*
Ga0132258_115177673	3300015371	Arabidopsis Rhizosphere	MRVLLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVITVRVER
Ga0132257_1026044582	3300015373	Arabidopsis Rhizosphere	MRILLLLTALGLAGCADTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVITVRVER
Ga0182041_103636711	3300016294	Soil	LLLLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0182033_102528132	3300016319	Soil	LREGDMRVLLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0182035_102171923	3300016341	Soil	GDMRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTHRYDNCRMTLKENRNGVVTVRVR
Ga0182040_100588294	3300016387	Soil	GLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0210407_104710811	3300020579	Soil	MRALLLLLALALGGCAFNARLDDAKCREMGAAPGTARYDNCRMTLQEKRNGVVTVRVER
Ga0210406_108391242	3300021168	Soil	MRVLLLLLTALGLAGCADTFATRDDAKCRAMGAQRGTDRYDDCRLALKENRNGVITVRVR
Ga0210406_111067171	3300021168	Soil	MRVLLLCVALGLAGCVDTFARRDDAKCRDMGAQRGTDRYDKCRMTLKENRNGVVTVRVR
Ga0213872_101501492	3300021361	Rhizosphere	MRVLLLLTALGLAGCDTFATRDDATCRAMGAQRGTDRYDNCRMTLKEKRNGVVTVRVR
Ga0210402_104621563	3300021478	Soil	MRVLLLLLTALGLAGCADTFATRDDAKCRAMGAQRGTDRYDDCRVALKENRNGVITVRVR
Ga0126371_110009572	3300021560	Tropical Forest Soil	LLLTALGLAGCVDTFARRDDAKCLAMGAQRGTNRYDNCRMTLKENRNGVVTVRVR
Ga0126371_114265612	3300021560	Tropical Forest Soil	MRVLLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRMTLKEKRNGVITVRVR
Ga0126371_114550292	3300021560	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCLAMGAQRGTDRYDNCRMTLKENRNGVVTIRVR
Ga0126371_119594681	3300021560	Tropical Forest Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVITVRVR
Ga0126371_135740071	3300021560	Tropical Forest Soil	MRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0242654_101735151	3300022726	Soil	NMRALLLLLALALGGCAFNARLDDAKCREMGAAPGTARYDNCRMTLQEKRNGVVTVRVER
Ga0207693_106483002	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRALLLLLALALGGCAFNARLDDAKCREMGAAPDTARYDNCRMTLQEKRNGVVTVRVER
Ga0207665_105439302	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLLLLTALGLAGCADTFAARDDATCRAMGAQRGTDRYDDCRLALKEKRNGVVTVRVR
Ga0209240_11011412	3300026304	Grasslands Soil	MRVLLLLTALGLAGCADTFATRDDARCRAMGAQRGTDRYDNCRTTLKENRNGVVTVRVR
Ga0209647_12690881	3300026319	Grasslands Soil	MRILLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0209801_10587143	3300026326	Soil	MRVLLLLTALGLAGCADTFASRDDATCRAMGARRDTDRYDNCRMTLKENRNGVVTVRVR
Ga0209622_10134623	3300027502	Forest Soil	MRILLLLTALGLAGCADTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0209684_10152331	3300027527	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCRAMGAQRGTDRYDNCRMILKENRNSVVTVRVR
Ga0209799_11031112	3300027654	Tropical Forest Soil	MRVLLLLTALGLAGCVDTFARRDDAKCLAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0222749_100863481	3300029636	Soil	MRVLLLLTALGLAGCADTFATRDDAKCRAMGAQRGTDRYDDCRLALKEKRNGVVTVRVR
Ga0318516_100868504	3300031543	Soil	MRVLLLLTALGLAGCADTFAGRDDAKCRAMGAQRGTDRYDNCRMTVKENRNGVVTVRVER
Ga0318516_100967032	3300031543	Soil	MRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTHRYDNCRMTLKENRNGVVTVRVR
Ga0318516_103437882	3300031543	Soil	MRVLLLLIALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0318516_108326601	3300031543	Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRMTLKEKRNGVITVRVR
Ga0318534_100480874	3300031544	Soil	MRVLLLLTALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKEKRNGVITVRVR
Ga0318541_102354411	3300031545	Soil	MRVLLLLTALGLAGCVDTFARRDDANCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0318573_104556301	3300031564	Soil	VLLLLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0310915_112249801	3300031573	Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRLTLKEKRNGVVTVRV
Ga0318500_100234491	3300031724	Soil	MRVLLLLTALGLAGCVDTFARRDDANCRAMGAQRGTDRYDNCRMTLKENRNG
Ga0318546_102290831	3300031771	Soil	GLAGCDTFATRDDAKCRALGAQRGTHRYDNCRMTLKENRNGVVTVRVR
Ga0318546_106566341	3300031771	Soil	MRVLLLLTALGLAGCDTFATRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0318546_110200692	3300031771	Soil	MRVLLLLTALGLAGCADTFARRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTVR
Ga0318543_101958122	3300031777	Soil	ALGLAGCDTFATRDDAKCRALGAQRGTHRYDNCRMTLKENRNGVVTVRVR
Ga0318557_102198852	3300031795	Soil	LREGDMRVLLLLTALGLAGCADTFAGRDDAKCRAMGAQRGTDRYDNCRMTVKENRNGVVTVRVER
Ga0318550_101312061	3300031797	Soil	LREGDMRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTHRYDNCRMTLKENRNGVVTVRVR
Ga0318523_103799572	3300031798	Soil	MRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTHRYDNCRMTLKEKRNGVITVRVR
Ga0318544_102166302	3300031880	Soil	MRVLLLLTALGLAGCADTFARRDDAKCRAMGAQRGTDRYDNCRMTLKENRNGVVTV
Ga0318544_102939811	3300031880	Soil	MRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKEN
Ga0306925_102805151	3300031890	Soil	LLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0306923_110285831	3300031910	Soil	MRVLLLLTALGLAGCADTFAARDDAKCRAMGAQRGTDRYDDCRLALKENRNGVITVRVR
Ga0306921_104767451	3300031912	Soil	LGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0310912_100273247	3300031941	Soil	RVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTHRYDNCRMTLKENRNGVVTVRVR
Ga0310913_113132522	3300031945	Soil	LREGDMRVLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRLTLKEKRNGVVTVRVR
Ga0318530_100332201	3300031959	Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRMTLKEKRNG
Ga0318507_100215092	3300032025	Soil	MRVLLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRLTLKEKRNGVVTVRVR
Ga0310911_101215471	3300032035	Soil	MRVLLLLTALGLAGCADTFASRDDATCRAMGAQRGTDRYDNCRLTLKENRNGVVTVRVR
Ga0318549_104329652	3300032041	Soil	LLLLTALGLAGCDTFAPRDDAKCRAMGAQRGTDRYDNCRMTLKEKRNGVITVRVR
Ga0318545_102482321	3300032042	Soil	ALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0318506_102974691	3300032052	Soil	VLLLLTALGLAGCDTFATRDDAKCRALGAQRGTHRYDNCRMTLKENRNGVVTVRVR
Ga0318505_103275841	3300032060	Soil	LREGDMRVLLLLTALGLAGCDTFATRDDAKCRALGAQRGTDRYDNCRMTLKENRNGVVTVRVR
Ga0306924_116313081	3300032076	Soil	LGLAGCDTFATRDDAKCRALGAQRGTHRYDNCRMTLKENRNGVVTVRVR
Ga0307471_1012792742	3300032180	Hardwood Forest Soil	MRVLLLLTALGLAGCADTFATRDDAKCRAMGAQRGTDRYDDCRLALKENRNGVITVRVR
Ga0307471_1027431981	3300032180	Hardwood Forest Soil	LLCHDRRDNMRALLLLLALALGGCAFNARLDDAKCREMGAAPGTDRYDNCRMALQEKRNGVVTVRVR
Ga0307472_1026873181	3300032205	Hardwood Forest Soil	MRVLLLLTALGLAGCADTFAARDDATCRAMGAQRGTDRYDDCRMALKEKRNGVITVRVR
Ga0306920_1032407991	3300032261	Soil	MRVLLLLTALGLAGCVDTFARRDDAKCRAMGAQRGTDRYDSCRMTLKENRNGVVTVRVR
Ga0318519_101981413	3300033290	Soil	MRVLLLLTALGLAGCVDTFARRDDANCRAMGAQRGTDRYDNCRMTLKENCNGVVTVRVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049912

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences