Metagenome / Metatranscriptome Family F049893

Basic Information
Family ID	F049893
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	47 residues
Representative Sequence	MLLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQAA
Number of Associated Samples	106
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.27 %
% of genes near scaffold ends (potentially truncated)	22.60 %
% of genes from short scaffolds (< 2000 bps)	70.55 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Bacteria (56.164 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil (12.329 % of family members)
Environment Ontology (ENVO)	Unclassified (19.863 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.795 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.67% β-sheet: 0.00% Coil/Unstructured: 53.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF01979	Amidohydro_1	44.52
PF10282	Lactonase	38.36
PF01882	DUF58	0.68
PF12345	DUF3641	0.68
PF13462	Thioredoxin_4	0.68
PF01566	Nramp	0.68
PF12867	DinB_2	0.68
PF01553	Acyltransferase	0.68
PF01578	Cytochrom_C_asm	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.68
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.16 %
Unclassified	root	N/A	43.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.16 %
Unclassified	root	N/A	43.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.16 %
Unclassified	root	N/A	43.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.03 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.03 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.42 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.03 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.42 %
Gallionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae	0.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.03 %
Candidatus Nitrotoga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga	0.68 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.03 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.68 %
unclassified Candidatus Nitrotoga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga → unclassified Candidatus Nitrotoga	0.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.03 %
Candidatus Nitrotoga sp. LAW	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga → unclassified Candidatus Nitrotoga → Candidatus Nitrotoga sp. LAW	0.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119400574	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300002568\|C688J35102_120986498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6730	Open in IMG/M
3300002906\|JGI25614J43888_10079505	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300003324\|soilH2_10359658	All Organisms → cellular organisms → Bacteria	1876	Open in IMG/M
3300004479\|Ga0062595_100064072	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300004479\|Ga0062595_100628080	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300004800\|Ga0058861_11288811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300004803\|Ga0058862_10289124	Not Available	689	Open in IMG/M
3300005186\|Ga0066676_10314650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300005329\|Ga0070683_100170257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2067	Open in IMG/M
3300005332\|Ga0066388_100766739	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300005336\|Ga0070680_100178440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1789	Open in IMG/M
3300005434\|Ga0070709_10453436	Not Available	967	Open in IMG/M
3300005434\|Ga0070709_11635689	Not Available	525	Open in IMG/M
3300005436\|Ga0070713_101235149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300005437\|Ga0070710_11128613	Not Available	577	Open in IMG/M
3300005439\|Ga0070711_100415299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300005439\|Ga0070711_101481341	Not Available	592	Open in IMG/M
3300005458\|Ga0070681_10246769	Not Available	1698	Open in IMG/M
3300005458\|Ga0070681_10774993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300005518\|Ga0070699_101777616	Not Available	564	Open in IMG/M
3300005518\|Ga0070699_102144762	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005529\|Ga0070741_10009497	All Organisms → cellular organisms → Bacteria	18840	Open in IMG/M
3300005530\|Ga0070679_101748957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300005532\|Ga0070739_10360722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300005533\|Ga0070734_10003093	All Organisms → cellular organisms → Bacteria	18284	Open in IMG/M
3300005533\|Ga0070734_10029661	All Organisms → cellular organisms → Bacteria	3473	Open in IMG/M
3300005537\|Ga0070730_10151288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1574	Open in IMG/M
3300005538\|Ga0070731_10878355	Not Available	594	Open in IMG/M
3300005542\|Ga0070732_10020570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3710	Open in IMG/M
3300005542\|Ga0070732_10834308	Not Available	562	Open in IMG/M
3300005542\|Ga0070732_10959935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300005547\|Ga0070693_100652045	Not Available	766	Open in IMG/M
3300005575\|Ga0066702_10276715	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300005587\|Ga0066654_10588572	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300005587\|Ga0066654_10668169	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005616\|Ga0068852_101039558	Not Available	838	Open in IMG/M
3300005764\|Ga0066903_106403206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300006050\|Ga0075028_100396852	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300006172\|Ga0075018_10684136	Not Available	553	Open in IMG/M
3300006173\|Ga0070716_101308633	Not Available	586	Open in IMG/M
3300006175\|Ga0070712_100423619	Not Available	1103	Open in IMG/M
3300006903\|Ga0075426_10144706	Not Available	1713	Open in IMG/M
3300006954\|Ga0079219_10690232	All Organisms → cellular organisms → Bacteria → Proteobacteria	773	Open in IMG/M
3300007788\|Ga0099795_10034625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1760	Open in IMG/M
3300009545\|Ga0105237_10837125	Not Available	927	Open in IMG/M
3300009551\|Ga0105238_11032928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300009651\|Ga0105859_1278144	Not Available	518	Open in IMG/M
3300009662\|Ga0105856_1116259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300010159\|Ga0099796_10281786	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010159\|Ga0099796_10363026	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300010371\|Ga0134125_12364939	Not Available	578	Open in IMG/M
3300010373\|Ga0134128_10520783	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300010373\|Ga0134128_10840751	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300010375\|Ga0105239_11231096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300010397\|Ga0134124_10157376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2032	Open in IMG/M
3300010399\|Ga0134127_12543516	Not Available	592	Open in IMG/M
3300012202\|Ga0137363_11121767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300012212\|Ga0150985_119536622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300012469\|Ga0150984_104637182	Not Available	509	Open in IMG/M
3300012582\|Ga0137358_10334290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga → unclassified Candidatus Nitrotoga → Candidatus Nitrotoga sp. LAW	1027	Open in IMG/M
3300012683\|Ga0137398_10035374	All Organisms → cellular organisms → Bacteria	2867	Open in IMG/M
3300012930\|Ga0137407_12396186	Not Available	504	Open in IMG/M
3300012955\|Ga0164298_10016086	All Organisms → cellular organisms → Bacteria	3073	Open in IMG/M
3300012957\|Ga0164303_10417855	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300012958\|Ga0164299_10314210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300012958\|Ga0164299_10390423	Not Available	890	Open in IMG/M
3300012958\|Ga0164299_10493027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300012958\|Ga0164299_10691624	Not Available	712	Open in IMG/M
3300012960\|Ga0164301_10429748	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300012960\|Ga0164301_10580252	Not Available	824	Open in IMG/M
3300012971\|Ga0126369_13121131	Not Available	542	Open in IMG/M
3300012984\|Ga0164309_10569417	Not Available	879	Open in IMG/M
3300012985\|Ga0164308_10042046	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300012986\|Ga0164304_10696349	Not Available	771	Open in IMG/M
3300012986\|Ga0164304_10826978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300012987\|Ga0164307_10324472	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300012987\|Ga0164307_10630233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300013296\|Ga0157374_12084335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	594	Open in IMG/M
3300015089\|Ga0167643_1047977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300015242\|Ga0137412_10761854	Not Available	714	Open in IMG/M
3300020070\|Ga0206356_11009008	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300020078\|Ga0206352_10967452	Not Available	696	Open in IMG/M
3300020078\|Ga0206352_11120949	Not Available	548	Open in IMG/M
3300020610\|Ga0154015_1572658	Not Available	798	Open in IMG/M
3300021180\|Ga0210396_11214107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300021404\|Ga0210389_10026648	All Organisms → cellular organisms → Bacteria → Acidobacteria	4451	Open in IMG/M
3300021475\|Ga0210392_10290611	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300021560\|Ga0126371_10178201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2207	Open in IMG/M
3300022467\|Ga0224712_10333857	Not Available	714	Open in IMG/M
3300023056\|Ga0233357_1009470	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300024288\|Ga0179589_10278835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300024288\|Ga0179589_10396186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300025544\|Ga0208078_1007296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2711	Open in IMG/M
3300025912\|Ga0207707_10191321	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300025913\|Ga0207695_10123239	All Organisms → cellular organisms → Bacteria	2558	Open in IMG/M
3300025913\|Ga0207695_11218631	Not Available	633	Open in IMG/M
3300025914\|Ga0207671_11272657	Not Available	573	Open in IMG/M
3300025917\|Ga0207660_10302145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300025917\|Ga0207660_11620241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300025920\|Ga0207649_10463994	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M
3300025929\|Ga0207664_10766602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300025944\|Ga0207661_10404642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300025981\|Ga0207640_11409110	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300026078\|Ga0207702_10654842	Not Available	1033	Open in IMG/M
3300026078\|Ga0207702_11362960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300026319\|Ga0209647_1228904	Not Available	626	Open in IMG/M
3300026557\|Ga0179587_10126770	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300026557\|Ga0179587_10199245	Not Available	1268	Open in IMG/M
3300027307\|Ga0209327_1044200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300027574\|Ga0208982_1048145	Not Available	847	Open in IMG/M
3300027773\|Ga0209810_1291678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300027826\|Ga0209060_10004971	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9910	Open in IMG/M
3300027826\|Ga0209060_10063461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1761	Open in IMG/M
3300027842\|Ga0209580_10015592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3326	Open in IMG/M
3300027842\|Ga0209580_10393835	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300027903\|Ga0209488_10045089	All Organisms → cellular organisms → Bacteria	3241	Open in IMG/M
3300028800\|Ga0265338_10178425	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300031057\|Ga0170834_102818541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300031938\|Ga0308175_100167022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2130	Open in IMG/M
3300033412\|Ga0310810_11328118	Not Available	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.67%
Host-Associated	Host-Associated	12.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.30%
Plants	Host-Associated → Plants	10.96%
Aquatic	Environmental → Aquatic	1.37%
Human	Host-Associated → Human	1.37%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.42%
Sediment	Environmental → Aquatic → Sediment	1.37%
Digestive System	Host-Associated → Human → Digestive System	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.64%
Loam	Environmental → Terrestrial → Soil → Loam	23.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.37%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.37%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.37%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.37%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	12.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.22%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.16%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.05%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.37%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.68%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1194005742	3300002568	Soil	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQVA*
C688J35102_1209864981	3300002568	Soil	MMLWIILGMGWVAILFAGITLFRLADYADKKVRRLAERPRQRKKQAA*
JGI25614J43888_100795052	3300002906	Grasslands Soil	MLLWIILGMGWLGVLFAAVSLFRIAGYADKKMRRLAQRPRRREDQAA*
soilH2_103596582	3300003324	Sugarcane Root And Bulk Soil	MLLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKIAA*
Ga0063455_1013160931	3300004153	Soil	MLLWIILGLSWIIILFAAVCLFRIAGYADKKMRRIVQRPRRSEDQAA*
Ga0062595_1000640722	3300004479	Soil	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKIAA*
Ga0062595_1005339951	3300004479	Soil	MLLWIILGISWAVILCVAVCLFRLAGYADKKMRNLAQRPRRREDQAA*
Ga0062595_1006280802	3300004479	Soil	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRLTERPRQRNKQAA*
Ga0058861_112888111	3300004800	Host-Associated	MLWIILGMGWLAILFAGVTLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0058862_102891241	3300004803	Host-Associated	ILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQVA*
Ga0066676_103146503	3300005186	Soil	MLWIILGMGWLAILFAGVVLFRLADYADKKVRRLADRPRERKKQAA*
Ga0070683_1001702572	3300005329	Corn Rhizosphere	MMLWIILGMGWLAILFAGVTLFRLADYADKKVRRLAERPRQRKNQAA*
Ga0066388_1002299433	3300005332	Tropical Forest Soil	MLLWVILGFSWIVILLVAISLFRIAGYADRKMRRLAQRPRRREDQAA*
Ga0066388_1007667392	3300005332	Tropical Forest Soil	MLLWIILGLGWIAVLLAAVALFRLAGYADKKVRRRLTTRPRRSEDQAA*
Ga0070680_1001784402	3300005336	Corn Rhizosphere	MMLWIILGMGWLAILFAGVTLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0070709_101002892	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLLWIILGISWAVILCAAVCLFRLAGYADKKMRNFAQRPRRREDQAA*
Ga0070709_104534362	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRERKKQAA*
Ga0070709_116356892	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVLWIILGMGWLAILFAGITLFRLADYADKKVRRLAERPRERKKQAA*
Ga0070713_1012351492	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLLWVILGMGWLAILFAGITLFRLADYADRKLRRLAERPKQRKKQAA*
Ga0070710_111286131	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLLWIILVIGWLGILVAGVSLFRIAGYADKKVRRFVERPRYRNDQAA*
Ga0070711_1004152991	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLLWIILGMGWLGVLFAAVSLFRIAGYADKKMRRLAQRPRRR
Ga0070711_1014813412	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0070681_102467691	3300005458	Corn Rhizosphere	MMLWIILGMGWLAILFAGVTLFRLADYADRKVRRLAERPRQRKKQAA*
Ga0070681_107749931	3300005458	Corn Rhizosphere	MLWIILGMGWLAILFAGITLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0070699_1017776162	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	IILGMGWLAILFAGISLFRLADYADKKVRRLTERPRQRNKQAA*
Ga0070699_1021447621	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MVLWLILGMGWLAILFAGIILFRLADYADKKVRRLAERPRQRKKQAA*
Ga0070741_100094973	3300005529	Surface Soil	MLLWVILGLCWLVILFAGVSLFRIAGYADKKMRRLVHRPRHSGDQAA*
Ga0070679_1017489572	3300005530	Corn Rhizosphere	MVLWIILGMAWLAILFAGITLFRLADYADKKVRRFAERPRERKKQAA*
Ga0070739_103607222	3300005532	Surface Soil	MLLWIILALGWIGVLMAGVALFRLASFADRQMRRYAQRPRQQEDQAA*
Ga0070734_1000309321	3300005533	Surface Soil	MVLWIILGMGWLAIMFAGIMLFRLAGYADRKVRRLAERPRQRKKQAA*
Ga0070734_100296613	3300005533	Surface Soil	MLMWIILGFGWLAILFAGVSLFRLAGYADKKVRRLAQRPRQRNNQAA*
Ga0070730_100243823	3300005537	Surface Soil	MLLWIILGICWGVILCAAICLFRLAGYADKKMRNLAQRPRRREDQAA*
Ga0070730_100247604	3300005537	Surface Soil	MLLWIILGISWAVILFAGVCLFRLAGYADKKMRNLAQRPRGREDQAA*
Ga0070730_101512882	3300005537	Surface Soil	MVLWIILGLGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0070731_108783552	3300005538	Surface Soil	MLMWIILGFGWLAILFAGVSLFRLAGYADKQVRRLTQRPRERNNQAA*
Ga0070732_100205704	3300005542	Surface Soil	MVLWVILGMGWLAILFAGVSLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0070732_108343082	3300005542	Surface Soil	ILGMGWLAILFAGITLFRLADYADKKLRRLAERPKQRKKQAA*
Ga0070732_109599351	3300005542	Surface Soil	MVLWIILGMGWLAILFAGITLFRLADYADKKLRRLAERPKQRKKQAA*
Ga0070693_1006520451	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKLVA*
Ga0066703_103934972	3300005568	Soil	MLLWIILGLSWAFILCAAVCLFRIAGYADRQMRRRLSQRPQRRRAAEDQTA*
Ga0066702_102767152	3300005575	Soil	MMLWIILGMGWLAILFAGISLFRLAGYADKKVRRLAERPRERKKQAA*
Ga0066654_105885722	3300005587	Soil	MMLWIILGLGWLAILFAGVTLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0066654_106681692	3300005587	Soil	MMLWIILGMGWVAILFAGITLFRLADYAEKKVRRLAERPRQRKKQAA*
Ga0068852_1010395582	3300005616	Corn Rhizosphere	ILFAGVTLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0066903_1002465694	3300005764	Tropical Forest Soil	MLLWIILGLGWIAVLLAAVALVRLAGYADKKVRRRLTTRTRRSEDQAA*
Ga0066903_1003353332	3300005764	Tropical Forest Soil	MLLWVILGFSWLVILLAAISIFRIAGYADRKMRRLTQRPRRNEDQAA*
Ga0066903_1064032061	3300005764	Tropical Forest Soil	MLLWIILGIGWLGILFAGVSLFRIAGYADKKVRRFVDRPRYRVER
Ga0070717_106752612	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLLWIILGISWAVILCAAVCVFRLAGYADKKMRNFAQRPRRREDQAA*
Ga0075028_1003968522	3300006050	Watersheds	MVLWIILGIGWLAILFAGISLFRLADYADKKVRRLAERPRQRNKQAA*
Ga0075018_106841362	3300006172	Watersheds	RRNESITRMLLWIILGLGWLGVLFAAVCLFRIAGYADKKVRRLAERPRRREDRAA*
Ga0070716_1013086332	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MVLWIILGMGWLAILFAGITLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0070712_1004236192	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRERKKQAA*
Ga0070712_1011524122	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SWAVILWAAVCLFRLAGYADKKMRNFAQRPRRREDQAA*
Ga0075426_101447062	3300006903	Populus Rhizosphere	MGWLAILFAGISLFRLADYADKKVRRLTERPRQRNKQAA*
Ga0079219_106902322	3300006954	Agricultural Soil	MLLWIILGMGWLGVLFAGVSLFRIAGYADKKMRRLAQRPRRREDQAA*
Ga0099795_100346252	3300007788	Vadose Zone Soil	MLLWIILGLGWLGILFAGVALFRLADYADKKVRRLADRPRQRKKQAA*
Ga0105237_108371252	3300009545	Corn Rhizosphere	MVLWIILGMAWLAVLFAGITLFRLADYADKKVRRFAERPRERKKQAA*
Ga0105238_110329282	3300009551	Corn Rhizosphere	MVLWLILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQVA*
Ga0105859_12781441	3300009651	Permafrost Soil	MLLWIILGVGWLCILLAGISLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0105856_11162591	3300009662	Permafrost Soil	MLLWIILGFGWLGILVAGVSLFRFAAYADKKVRRLTERPRRRDKQAA*
Ga0126384_100593903	3300010046	Tropical Forest Soil	MLLWIILGISWALILCAAICVFRLAGYADKKMRRFTQRPRHREDQAA*
Ga0126384_123018131	3300010046	Tropical Forest Soil	MLLWVILGFSWVAILLAAISLFRIAGYADRKMRRFVQRPRRGEDHAT*
Ga0126382_116360102	3300010047	Tropical Forest Soil	MLLWIILGFSWLVILLAAISLFRIAGYADRKMRRLTQRQRRREDQAA*
Ga0099796_102817862	3300010159	Vadose Zone Soil	MLLWIILGMGWLAILFAGITLFRLADYADKKVRRLAERPRQRKNQAA*
Ga0099796_103630262	3300010159	Vadose Zone Soil	MVLWIILGMGWLAILFAGIILFRLADYADKKVRRLTERPRERKKQAA*
Ga0126370_117994662	3300010358	Tropical Forest Soil	LGISWALILCAAICVFRLAGYADKKMRRFTQRPRHREDQAA*
Ga0126376_105470262	3300010359	Tropical Forest Soil	MLLWVILGFGWLVILLAAISLFRIAGYADRKMRRLTQRPRRNEDQAA*
Ga0126378_111014712	3300010361	Tropical Forest Soil	MLLWIILALAWIVILFAAVSLFRIAGYADKKMRRLAHRPRRREDQAA*
Ga0134125_123649392	3300010371	Terrestrial Soil	WLAILFAGITLFRLADYADKKVRRLAERPRQRRKQAA*
Ga0134128_105207832	3300010373	Terrestrial Soil	MVLWLILGMGWLAILFAGVILFRLADYADKKVRRLAERPRQRKKQAA*
Ga0134128_108407512	3300010373	Terrestrial Soil	MGRLVILFAGVRLFRLANYADKKVRRLAERPRQRKKLAA*
Ga0105239_112310962	3300010375	Corn Rhizosphere	MMLWIILGMGWLAILFAGITLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0134124_101573762	3300010397	Terrestrial Soil	MLLWIILGMGWLGILIAGVSLFRIAGYADKKLRRLVDRPDRTDHPRYRTDRPRYRNDQAA
Ga0134127_125435162	3300010399	Terrestrial Soil	MVLWIILGMGWLAILFAGVSLFRLANYADKKVRRLAERPRQRKKLVA*
Ga0134121_127582642	3300010401	Terrestrial Soil	MLLWIILGLSWVIILFAAVCLFRIAGYADKKMRRIVQRPRRSEDQAA*
Ga0137363_111217671	3300012202	Vadose Zone Soil	MLLWIILALGWLGILLAAISLFRLANYADKKVRRMAQRPRRREDQAA*
Ga0150985_1195366223	3300012212	Avena Fatua Rhizosphere	MMLWIILGMGWLAILFAGVVLFRLADYADKKVRRLADRPRERKKQAA*
Ga0150984_1046371821	3300012469	Avena Fatua Rhizosphere	ILGIGWLGILFAGVSLFRIAGYADKKVRRFVDRPRYRVERSRYRNDQAA*
Ga0137358_103342902	3300012582	Vadose Zone Soil	DVNLFRQMLLWIILALGWLGILLAAISLFRLANYADKKVRRMAQRPRRREDQAA*
Ga0137398_100353742	3300012683	Vadose Zone Soil	MESYCWMLLWIILGLGWLGILFAGVALFRLADYADKKVRRLADRPRQRKKQAA*
Ga0137407_123961862	3300012930	Vadose Zone Soil	LVLLWIILGLGWLGILFAGVALFRLADYADKKVRRLAERPRQRKKQAA*
Ga0164298_100160862	3300012955	Soil	MLVWIILGVGWLGVLFAGIALFRLADYADKKVRRLADRPRQRHKQAA*
Ga0164303_104178552	3300012957	Soil	MLVWIILGVGWLGVLFAGIALFRLADYADKKVRRLAERPRQRHKQAA*
Ga0164299_103142101	3300012958	Soil	MVLWIILGMGWLAIMFAGIMLFRLADYADRKVRRLAERPRQRKKQAA
Ga0164299_103904232	3300012958	Soil	MLLWIILGLGWLGILLAAVCLFRLAGYADKKVRRLSARPRRREDQAA*
Ga0164299_104930272	3300012958	Soil	MLLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0164299_106916242	3300012958	Soil	WLAILFAGISLFRLAEYADKKVRRLAERPRERKKQAA*
Ga0164301_104297482	3300012960	Soil	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQREKQAA*
Ga0164301_105802522	3300012960	Soil	LLLVWIILVVGWLGVLFAGIALFRLADYADKKVRRLADRPRHRHKQAA*
Ga0126369_100627093	3300012971	Tropical Forest Soil	MLLWIILGISWALILCAAVCLFRLAGYADKKMRNFKMRSFAQRSRRREDQAA*
Ga0126369_131211312	3300012971	Tropical Forest Soil	MLLWIILGLGWIAVLLAAVALVRLAGYADKKVRRRLTTRPRRSEDQAA*
Ga0164309_105694171	3300012984	Soil	MLLWIILGIGWLGILFAGVSLFRIAGYADKKVRRFVERPRYRNDQAA*
Ga0164308_100420463	3300012985	Soil	MLVWIILGVGWLGVLFAGIAVFRLADYADKKVRRLADRPRQRHKQAA*
Ga0164304_106963492	3300012986	Soil	VERPLSPTPQYWIESYSVMLLWIILGMGWLAILFAGVSLFRLADYADKKVRRLAERPRQRKKQAA*
Ga0164304_108269782	3300012986	Soil	MVLWIILGMGWLAIMFAGIMLFRLADYADRKVRRLAERPRQRKKQAA*
Ga0164307_103244722	3300012987	Soil	MLVWIILGGGCLVVLFAGIALFRLADYADKKVRRLADRPRQRHKQAA*
Ga0164307_106302332	3300012987	Soil	MLLWIILGMGWLAIIIAGISLFRLADYADKKVRRLAERPRERKKQAA*
Ga0157374_120843352	3300013296	Miscanthus Rhizosphere	MVLWIILGMGWLAILFAGITLLRLADYADKKVRRLAERPRQRKKQAA*
Ga0167643_10479771	3300015089	Glacier Forefield Soil	MLLWIILGFGWLGILVAGVSLFRFAGYADKKVRRLTERPRRGDKQAA*
Ga0137412_107618542	3300015242	Vadose Zone Soil	MLLWIILGLGWLGILFAGVALFRLADYADKKVRRLAERPRHRSKQTA*
Ga0206356_110090082	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MVLWIILGMAWLAVLFAGITLFRLADYADKKVRRFAERPRERKKQAA
Ga0206352_109674522	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MVLWIILGMGWLAILFAGVTLFRLADYADKKVRRLAERPRQRKKQAA
Ga0206352_111209492	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	WIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQVA
Ga0154015_15726582	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	VQPGNKGLNLIAMVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQVA
Ga0210396_112141071	3300021180	Soil	MWIILGFGWLGVLLAGVSLFRVASFADKKVRHLDKKVRSIAERRRRYDQAA
Ga0210389_100266482	3300021404	Soil	MLMWIILGFGWLGVLFAGVSLFRIAGYADKKVRRLAQRPRGRNDQAA
Ga0210392_102906112	3300021475	Soil	MWIILGFGWLGVLFAGVSLFRIAGYADKKVRRLAQRPRGRNDQAA
Ga0126371_101782013	3300021560	Tropical Forest Soil	MVLWIILGVGWLAILFAGISLFRLANYADKKVRRMAERPRQRDKQAA
Ga0126371_108759232	3300021560	Tropical Forest Soil	MLLWIILALGWIVILFAAVSLFRIAGYADKKMRRLIHRPRHSEDQAA
Ga0126371_111377622	3300021560	Tropical Forest Soil	MLLWVILGLCWLVILFAAVSLFRIAGYADKKMRRLVHRPRHSEDQAA
Ga0126371_120194802	3300021560	Tropical Forest Soil	MLLWIILGISWALILCAAVCLFRLAGYADKKMRNFKMRSFAQRPRRREDQAA
Ga0224712_103338571	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LGMGWLAILFAGVTLFRLADYADKKVRRLAERPRQRKKQAA
Ga0233357_10094702	3300023056	Soil	MLLWIILGIGWLGILCAGISLFRLADYADKKVRHLDKKMRRLADRPRQSKKLAA
Ga0179589_102788352	3300024288	Vadose Zone Soil	MLLWIILGMGWLGVLIAGVFLFRIAGYADKKLRRLAGRQRYRNDQAA
Ga0179589_103961862	3300024288	Vadose Zone Soil	MLLWIILGLGWLGILFAGITLFRLADYADKKVRRLADRPRQRNKQAA
Ga0208078_10072964	3300025544	Arctic Peat Soil	AGISLFRLADYADKKVRHLDKKMRRLAGRPRQSKKLAA
Ga0207707_101913212	3300025912	Corn Rhizosphere	MLWIILGMGWLAILFAGVTLFRLADYADKKVRRLAERPRQRKKQAA
Ga0207695_101232392	3300025913	Corn Rhizosphere	MVLWIILGMAWLAILFAGITLFRLADYADKKVRRFAERPRERKKQAA
Ga0207695_112186311	3300025913	Corn Rhizosphere	GWLAILFAGVTLFRLADYADKKVRRLAERPRQRKKQAA
Ga0207671_112726571	3300025914	Corn Rhizosphere	NLIAMVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKLVA
Ga0207660_103021451	3300025917	Corn Rhizosphere	MMLWIILGMGWLAILFAGVTLFRLADYADKKVRRLAERPRQRKKQAA
Ga0207660_116202411	3300025917	Corn Rhizosphere	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERP
Ga0207649_104639942	3300025920	Corn Rhizosphere	GNKGLNLIAMVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKQVA
Ga0207664_107666023	3300025929	Agricultural Soil	MLVWIILGVGWLGVLFAGIALFRLADYADKKVRRL
Ga0207661_104046422	3300025944	Corn Rhizosphere	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRL
Ga0207640_114091102	3300025981	Corn Rhizosphere	MVLWIILGMGWLAVLFAGISLFRLADYADKKVRRLAERPRERKKQAA
Ga0207702_106548422	3300026078	Corn Rhizosphere	GMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKLVA
Ga0207702_113629601	3300026078	Corn Rhizosphere	MVLWIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRQRKKLVA
Ga0209647_12289041	3300026319	Grasslands Soil	PQHWIESYSLMLLWIILGLGWLGILFAGVALFRLADYADKKVRRLADRPRQRKKQAA
Ga0209059_12669551	3300026527	Soil	NLFSRMLLWIILGLSWAFILCAAVCLFRIAGYADRQMRRRLSQRPQRRRAAEDQTA
Ga0179587_101267702	3300026557	Vadose Zone Soil	MLLWIILALGWLGILLAAISLFRLANYADKKVRRMAQRPRRREDQAA
Ga0179587_101992451	3300026557	Vadose Zone Soil	MLLWIILGIGWLGILVAGVSLFRLADYADKKVRRLAERPRQRNKQAA
Ga0209327_10442002	3300027307	Forest Soil	MWIILGIGWFGILLAGISLFRLAGYADKKVRSFTQRTRSRTDLAA
Ga0208982_10481451	3300027574	Forest Soil	MWIILGFGWLGVLFAGVSLFRIAGYADKKVRDLAQRPRRRNDLAA
Ga0209810_12916781	3300027773	Surface Soil	MLLWIILALGWIGVLMAGVALFRLASFADRQMRRYAQRPRQQEDQAA
Ga0209060_100049714	3300027826	Surface Soil	MVLWIILGMGWLAIMFAGIMLFRLAGYADRKVRRLAERPRQRKKQAA
Ga0209060_100634612	3300027826	Surface Soil	MWIILGFGWLAILFAGVSLFRLAGYADKKVRRLAQRPRQRNNQAA
Ga0209580_100155924	3300027842	Surface Soil	MVLWVILGMGWLAILFAGVSLFRLADYADKKVRRLAERPRQRKKQAA
Ga0209580_103938352	3300027842	Surface Soil	MVLWIILGMGWLAILFAGITLFRLADYADKKLRRLAERPKQRKKQAA
Ga0209166_100681592	3300027857	Surface Soil	MLLWIILGICWGVILCAAICLFRLAGYADKKMRNLAQRPRRREDQAA
Ga0209166_105842811	3300027857	Surface Soil	MLLWIILGISWAVILFAGVCLFRLAGYADKKMRNLAQRPRGREDQAA
Ga0209488_100450893	3300027903	Vadose Zone Soil	MLLWIILGLGWLGILFAGVALFRLADYADKKVRRLADRPRQRKKQAA
Ga0265338_101784252	3300028800	Rhizosphere	MWIILGLGWIGVLFAGVSLFRFAGYADKQVRRLAQRPRRSNDQAA
Ga0170834_1028185411	3300031057	Forest Soil	MVLWIILGMGWLAILFAGITLFRLADYADKKVRRLADRPRQRKKQ
Ga0308175_1001670222	3300031938	Soil	MMLWIILGMGWLAILFAGVTLFRLADYADKKVRRLAERPRQRKNQAA
Ga0310810_113281182	3300033412	Soil	WIILGMGWLAILFAGISLFRLADYADKKVRRLAERPRERKKQAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049893

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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