NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F049890

Metagenome / Metatranscriptome Family F049890

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F049890
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 44 residues
Representative Sequence MPEEVTSLIDPAEQFNEETLIRRIREGEHDLFYELIRPYERRVY
Number of Associated Samples 129
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 95.14 %
% of genes near scaffold ends (potentially truncated) 97.26 %
% of genes from short scaffolds (< 2000 bps) 91.78 %
Associated GOLD sequencing projects 117
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.521 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(10.959 % of family members)
Environment Ontology (ENVO) Unclassified
(20.548 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.83%    β-sheet: 0.00%    Coil/Unstructured: 54.17%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF01292Ni_hydr_CYTB 49.32
PF00033Cytochrome_B 20.55
PF00174Oxidored_molyb 10.96
PF00933Glyco_hydro_3 1.37
PF00515TPR_1 1.37
PF02685Glucokinase 0.68
PF13414TPR_11 0.68
PF01641SelR 0.68
PF13899Thioredoxin_7 0.68
PF00691OmpA 0.68
PF00378ECH_1 0.68
PF13424TPR_12 0.68
PF00005ABC_tran 0.68
PF13411MerR_1 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG1969Ni,Fe-hydrogenase I cytochrome b subunitEnergy production and conversion [C] 49.32
COG2864Cytochrome b subunit of formate dehydrogenaseEnergy production and conversion [C] 49.32
COG3038Cytochrome b561Energy production and conversion [C] 49.32
COG3658Cytochrome b subunit of Ni2+-dependent hydrogenaseEnergy production and conversion [C] 49.32
COG4117Thiosulfate reductase cytochrome b subunitInorganic ion transport and metabolism [P] 49.32
COG1290Cytochrome b subunit of the bc complexEnergy production and conversion [C] 20.55
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 10.96
COG3915Uncharacterized conserved proteinFunction unknown [S] 10.96
COG1472Periplasmic beta-glucosidase and related glycosidasesCarbohydrate transport and metabolism [G] 1.37
COG0229Peptide methionine sulfoxide reductase MsrBPosttranslational modification, protein turnover, chaperones [O] 0.68
COG0837GlucokinaseCarbohydrate transport and metabolism [G] 0.68


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.52 %
UnclassifiedrootN/A5.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001154|JGI12636J13339_1026008All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium796Open in IMG/M
3300001593|JGI12635J15846_10267828All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300003367|JGI26338J50219_1026332All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300004080|Ga0062385_10833092All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300004092|Ga0062389_100904763All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300004152|Ga0062386_101080048All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300004152|Ga0062386_101241042All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300005167|Ga0066672_10837744All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300005177|Ga0066690_10815410All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter605Open in IMG/M
3300005332|Ga0066388_101670963All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300005450|Ga0066682_10951759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300005533|Ga0070734_10025498All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3823Open in IMG/M
3300005541|Ga0070733_11046161All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300005557|Ga0066704_10311529All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300005575|Ga0066702_10605545All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005591|Ga0070761_10723981All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300005598|Ga0066706_11037107All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005610|Ga0070763_10295557All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300005921|Ga0070766_10419735All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300005921|Ga0070766_10633572All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300006047|Ga0075024_100542308All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300006052|Ga0075029_100869792All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300006052|Ga0075029_101007730All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300006052|Ga0075029_101349036All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae502Open in IMG/M
3300006059|Ga0075017_100384201All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300006059|Ga0075017_100935341All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300006102|Ga0075015_100521603All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae687Open in IMG/M
3300006102|Ga0075015_100772981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300006172|Ga0075018_10723508All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300006173|Ga0070716_100028578All Organisms → cellular organisms → Bacteria3006Open in IMG/M
3300006173|Ga0070716_101223522All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300006176|Ga0070765_100909855All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300006796|Ga0066665_10691520All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300006797|Ga0066659_10146679All Organisms → cellular organisms → Bacteria1673Open in IMG/M
3300006893|Ga0073928_10573063All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300006893|Ga0073928_11035859Not Available558Open in IMG/M
3300006954|Ga0079219_10119801All Organisms → cellular organisms → Bacteria1338Open in IMG/M
3300007076|Ga0075435_101955031All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300009038|Ga0099829_10975263All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium703Open in IMG/M
3300009088|Ga0099830_10683318All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium844Open in IMG/M
3300009137|Ga0066709_100666866All Organisms → cellular organisms → Bacteria → Proteobacteria1491Open in IMG/M
3300009521|Ga0116222_1288296All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium709Open in IMG/M
3300009522|Ga0116218_1390459All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium621Open in IMG/M
3300009525|Ga0116220_10067870All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1494Open in IMG/M
3300009616|Ga0116111_1088650All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium800Open in IMG/M
3300009643|Ga0116110_1250954All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium567Open in IMG/M
3300009700|Ga0116217_10551894All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300010048|Ga0126373_10586750All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1166Open in IMG/M
3300010341|Ga0074045_10717715All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300010343|Ga0074044_11096332All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300010360|Ga0126372_12761609All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300010361|Ga0126378_12274476All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium619Open in IMG/M
3300010379|Ga0136449_101364568All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300010379|Ga0136449_103183549All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300011271|Ga0137393_10512391All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300012206|Ga0137380_10555642All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1007Open in IMG/M
3300012206|Ga0137380_10797874All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium815Open in IMG/M
3300012361|Ga0137360_10576616All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300012361|Ga0137360_10872102All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300012362|Ga0137361_10106946All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2443Open in IMG/M
3300012362|Ga0137361_10536806All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300012363|Ga0137390_10216934All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1900Open in IMG/M
3300012925|Ga0137419_10396630All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300012944|Ga0137410_10736434All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium824Open in IMG/M
3300014152|Ga0181533_1128653All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300014200|Ga0181526_10720145All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300014838|Ga0182030_11444626All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300015371|Ga0132258_10940935All Organisms → cellular organisms → Bacteria2182Open in IMG/M
3300016750|Ga0181505_10058784All Organisms → cellular organisms → Bacteria → Proteobacteria1214Open in IMG/M
3300017822|Ga0187802_10360318All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300017823|Ga0187818_10277062All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium735Open in IMG/M
3300017929|Ga0187849_1332685All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300017935|Ga0187848_10262083All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium727Open in IMG/M
3300017943|Ga0187819_10870951All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium504Open in IMG/M
3300017955|Ga0187817_10557787All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium731Open in IMG/M
3300017955|Ga0187817_10916267All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300017961|Ga0187778_10034946All Organisms → cellular organisms → Bacteria3074Open in IMG/M
3300017998|Ga0187870_1055033All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300018001|Ga0187815_10470484All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300018007|Ga0187805_10408479All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium631Open in IMG/M
3300018012|Ga0187810_10309231All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300018023|Ga0187889_10454766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300018025|Ga0187885_10409488All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium607Open in IMG/M
3300018033|Ga0187867_10656273All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300018034|Ga0187863_10908862Not Available500Open in IMG/M
3300018046|Ga0187851_10598432All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83623Open in IMG/M
3300018085|Ga0187772_10299115All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300018482|Ga0066669_12367709All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300020579|Ga0210407_10975594All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300020582|Ga0210395_10002602All Organisms → cellular organisms → Bacteria → Acidobacteria13983Open in IMG/M
3300020582|Ga0210395_11286496All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300021088|Ga0210404_10501457All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium686Open in IMG/M
3300021168|Ga0210406_10698802All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300021401|Ga0210393_11109375All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300021407|Ga0210383_10210063All Organisms → cellular organisms → Bacteria → Acidobacteria1666Open in IMG/M
3300021479|Ga0210410_10166591All Organisms → cellular organisms → Bacteria1968Open in IMG/M
3300022557|Ga0212123_10797482All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium568Open in IMG/M
3300022722|Ga0242657_1244627All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300025414|Ga0208935_1046563All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300025419|Ga0208036_1059895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium629Open in IMG/M
3300025442|Ga0208034_1021076All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1773Open in IMG/M
3300025500|Ga0208686_1048158All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300025507|Ga0208188_1120598All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300025926|Ga0207659_10511753All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1017Open in IMG/M
3300026315|Ga0209686_1030795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2062Open in IMG/M
3300026318|Ga0209471_1003837All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis8382Open in IMG/M
3300026318|Ga0209471_1135352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1035Open in IMG/M
3300026328|Ga0209802_1245775All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium620Open in IMG/M
3300026335|Ga0209804_1119963All Organisms → cellular organisms → Bacteria → Proteobacteria1195Open in IMG/M
3300026467|Ga0257154_1017601All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300026480|Ga0257177_1001581All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2283Open in IMG/M
3300026497|Ga0257164_1086887All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300026557|Ga0179587_11021012Not Available544Open in IMG/M
3300027047|Ga0208730_1002565All Organisms → cellular organisms → Bacteria1669Open in IMG/M
3300027497|Ga0208199_1065048All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium769Open in IMG/M
3300027645|Ga0209117_1154845Not Available597Open in IMG/M
3300027674|Ga0209118_1052121All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300027825|Ga0209039_10286515All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300027826|Ga0209060_10274538All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium771Open in IMG/M
3300027853|Ga0209274_10273623All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300027862|Ga0209701_10245317All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300027882|Ga0209590_10272396All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300027882|Ga0209590_10990207All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300027884|Ga0209275_10663150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium600Open in IMG/M
3300027986|Ga0209168_10493127All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300028906|Ga0308309_11899043Not Available502Open in IMG/M
3300029636|Ga0222749_10048092All Organisms → cellular organisms → Bacteria → Acidobacteria1876Open in IMG/M
3300029817|Ga0247275_1127352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300030339|Ga0311360_10529806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium943Open in IMG/M
3300030862|Ga0265753_1061683All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium690Open in IMG/M
3300030991|Ga0073994_10005370All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300031708|Ga0310686_109715537All Organisms → cellular organisms → Bacteria → Proteobacteria1424Open in IMG/M
3300031708|Ga0310686_119841596All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1814Open in IMG/M
3300031718|Ga0307474_11173851All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium607Open in IMG/M
3300031771|Ga0318546_10749320All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300031833|Ga0310917_11161243All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300032160|Ga0311301_12551264All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300032205|Ga0307472_100020087All Organisms → cellular organisms → Bacteria3638Open in IMG/M
3300032783|Ga0335079_11640963All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300033004|Ga0335084_10924687All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium881Open in IMG/M
3300033158|Ga0335077_10925022All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium876Open in IMG/M
3300033561|Ga0371490_1175047Not Available517Open in IMG/M
3300033825|Ga0334843_029572All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300034819|Ga0373958_0150244All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.22%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland6.85%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.16%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment5.48%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil5.48%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil5.48%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland4.79%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.11%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.42%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.74%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring2.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.05%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.05%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.05%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.37%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.37%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.37%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.37%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.37%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.37%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.68%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.68%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.68%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.68%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.68%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.68%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001154Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300003367Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024295Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5EnvironmentalOpen in IMG/M
3300025414Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025419Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025442Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025507Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027047Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)EnvironmentalOpen in IMG/M
3300027497Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029817Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25EnvironmentalOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033561Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fractionEnvironmentalOpen in IMG/M
3300033825Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 1-5EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12636J13339_102600813300001154Forest SoilMPEEVTSLEPPANLFNEEMLIQRIRNGEHDLFYDLIRPYERRVYSAAFAILRN
JGI12635J15846_1026782833300001593Forest SoilMPEEVTSLEPPAKPFNEEMLIQRIRNGEHDLFYELIR
JGI26338J50219_102633213300003367Bog Forest SoilMPEEAISLENRAERLNEEMLIRRIRDGEHELFYHLIRPYERRVYSTAFAIL
Ga0062385_1083309223300004080Bog Forest SoilMPGEGTSLTDPAEQFNEEMLIRRIREGEHDLFYELIRPYERRVYS
Ga0062389_10090476313300004092Bog Forest SoilMMPEGTSLENRAEQFNEEQLIQRVRGGEHDLFYELVRPYER
Ga0062386_10108004823300004152Bog Forest SoilMREEVMSLGNPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSA
Ga0062386_10124104213300004152Bog Forest SoilMPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSA
Ga0066672_1083774413300005167SoilMPEELTALEDPAQQFNEETLIQRVRDGEHDRFYALIRPYERRVYAAAFAILRNDAD
Ga0066690_1081541013300005177SoilMPERVISLERPAEPFNEETLIRRVLAGERELFYELIRPYE
Ga0066388_10167096313300005332Tropical Forest SoilLGAVESTAEKINEAMLIRRIRNGEHELFYDLIRPYERRVYATTFAI
Ga0066682_1095175913300005450SoilVLPRGLMPESAASLQNPARQLDEATLIERIRNGEHDLFYELIR
Ga0070734_1002549853300005533Surface SoilMPEKLTSLENPAEQPNEAMLIRRVRDGERDLFYELIRPYERRV
Ga0070733_1104616123300005541Surface SoilMPGEAISLENPADKLNEEMLIRRIRDGEHELFYELIR
Ga0066704_1031152933300005557SoilMSAETVSLGNPAESYNEQALIRRIRDGEHEAFYQLIQPYERRVYATTFAIL
Ga0066702_1060554523300005575SoilMPESATPLGHPARQTSEAELVRRVRDGEHDLFYELIRPYERRVYSAAFAIL
Ga0070761_1072398113300005591SoilMPEEAISLENRADRLNEETLIRRIRDGEHELFYELIRPY
Ga0066706_1103710723300005598SoilMLEEVTSLNSPAERFNEETLIRRIREGEHELFYELIRPYERRVYS
Ga0070763_1029555713300005610SoilMPEGAISLENRADRLNEETLIRRIRDGEHELFYELIRPYERRVYST
Ga0070766_1041973513300005921SoilMPEEAISLENRADRLNEETLIRRIRGGEHELFYELIRPYERRVYST
Ga0070766_1063357223300005921SoilMPETTASLGNPSEPLHEETLIRRIREGEHELFYELIRPY
Ga0075024_10054230813300006047WatershedsMPAEAASRENSREQSDEAILIRRIRDGEHELFYELVRPYE
Ga0075029_10086979213300006052WatershedsMPGERTSRTDPAEQFNEEMLIRRIREGEHDLFYELIRPYERRVYSAA
Ga0075029_10100773013300006052WatershedsMSAEAGSLEQPAEQFEEGALIRRICGGEHELFYELIRPYERRVYAAAFAILR
Ga0075029_10134903623300006052WatershedsMPERLTLLERPAEQANEAMLIRRVRDGEQELFYELIRPYERRVYAAAFAI
Ga0075017_10038420133300006059WatershedsMPELETSRTDPAGQFNEEMLIRRIREGEHDLFYELI
Ga0075017_10093534113300006059WatershedsMPGEGISLTDPAAQFNEEMLIRRIRDGEHDLFYELIRPYER
Ga0075015_10052160323300006102WatershedsMPERMNSLERPAEQLNEAMVIRRVLAGEHDLFYELIRPYERRVYA
Ga0075015_10077298123300006102WatershedsMPEEVTSLKRPAQQFNEETLIRRVRDGENDLFYELIRPY
Ga0075018_1072350823300006172WatershedsVMPEEVTSLKNPAERFNEETLIRRIREGEHELFYELIRPYERRVYSAALAI
Ga0070716_10002857813300006173Corn, Switchgrass And Miscanthus RhizosphereMPEGVTSLSNPAERFTEETLIRRIREGEHELFYELIRPYER
Ga0070716_10122352223300006173Corn, Switchgrass And Miscanthus RhizosphereMPEDVTSLKSAADRFNEERLIQRIREGEHELFYELIRPYERRVYSAALA
Ga0070765_10090985513300006176SoilMPGEATSLTDPAEQFNEGILIRRIRDGEHDLFYELIRPYERRVYSA
Ga0066665_1069152013300006796SoilMPDSAASLDNPAHQPDEATLIDRVRNGEHDLFYELIRPYERNVYRAAFAI
Ga0066659_1014667933300006797SoilMMPEGVTSLNKPAAQPSEDLLIRHIQDGEHEVFYELIRPYE
Ga0073928_1057306323300006893Iron-Sulfur Acid SpringMPERLISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYA
Ga0073928_1103585923300006893Iron-Sulfur Acid SpringMPERMISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYA
Ga0079219_1011980133300006954Agricultural SoilMPGETTSLTDPAQQFNEEMLIRRIRDGEQELFYELVR
Ga0075435_10195503123300007076Populus RhizosphereMPGETTSLTDPAQQFNEEMLIRRIRDGEHDLFYELIRPYERRVYSA
Ga0099829_1097526323300009038Vadose Zone SoilMPAEVSSLENPAQRFNEQKLIQRIRDGEHELFYELVRPYERRIYA
Ga0099830_1068331823300009088Vadose Zone SoilMPARAAALDNPAEKLDEEVLIRRIRDGEHELFHELIRPYESRV
Ga0066709_10066686633300009137Grasslands SoilMPGEATSLENPAEKSNEEMLIRRIRGGEHELFYELIRPYERRVYS
Ga0116222_128829613300009521Peatlands SoilMLAQLISLDNPADRLNEEMLIRRVREGEHELFYELIRPYERR
Ga0116218_139045923300009522Peatlands SoilMPEEAISLDNPADRLNEEMLIRRIRNGEHELFYELI
Ga0116220_1006787033300009525Peatlands SoilMPAEAISLDDPADRMNEEMLIRRIRDGEHELFYELI
Ga0116111_108865013300009616PeatlandMPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVY
Ga0116110_125095413300009643PeatlandMPEEVTSLEHPAKPSNEGMLIQRIRNGEHDLFYELI
Ga0116217_1055189423300009700Peatlands SoilMPEEAISLDNPAERLNEEMLIRRIRNGEHELFYELIQPYERRVY
Ga0126373_1058675033300010048Tropical Forest SoilMLEEVTSLNSPAERFNEETLIRRIREGEHELFYELIRPYERRVYSA
Ga0074045_1071771513300010341Bog Forest SoilMPGEATSLENPADRLNEETLIRRIRDGEPALFYQLIQPYERRVYSAAFAIVRNEAD
Ga0074044_1109633223300010343Bog Forest SoilMMPGERTSLTDPAQQFNEQMLIRRIRDGEHDLFYELIRPYERRV
Ga0126372_1276160913300010360Tropical Forest SoilMPEGVTSLSSPAERFNEEMLIRRIRDGEHELFYELVRPYERRVYSAA
Ga0126378_1227447613300010361Tropical Forest SoilMLEEVTSLNSPAERFNEETLIRRVREGEHELFYELIRPYERRVY
Ga0136449_10136456813300010379Peatlands SoilMPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSAALAIL
Ga0136449_10318354913300010379Peatlands SoilMPEEVTSLEHSAKLFNEEMLIQRIRDGEHDIFYELIR
Ga0137393_1051239133300011271Vadose Zone SoilMPAEVSSLENPAQRFNEQKLIQRIRDGEHELFYELIRPY
Ga0137380_1055564233300012206Vadose Zone SoilMPEEVTSLIDPAEQFNEETLIRRIREGEHDLFYELIRPYERRVY
Ga0137380_1079787413300012206Vadose Zone SoilMPDEAPLLDSPALQCNEQELIRRIRDGEDSLFYELIRPYERRVY
Ga0137360_1057661623300012361Vadose Zone SoilMPEKVTLLERPAEQCNEATLIRRVRDGEHELFYELIRPYERRVYAAAFAIL
Ga0137360_1087210213300012361Vadose Zone SoilMPERVISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYAAAF
Ga0137361_1010694613300012362Vadose Zone SoilVPERVTSLESAEKFNEEMLIRRVRDGEHELFYELIRPYERRVYAA
Ga0137361_1053680623300012362Vadose Zone SoilMPERVISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYER
Ga0137390_1021693413300012363Vadose Zone SoilMPERVISLEHPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYAAAF
Ga0137419_1039663013300012925Vadose Zone SoilMPARAAALDNPAEKLDEEVLIRRIRDGELELFHQLIRPYESRVYSAA
Ga0137410_1073643423300012944Vadose Zone SoilMPDERSTLGDGSQQPSEETLIRRIRDGEHDLFYQLIRP
Ga0181533_112865313300014152BogMREEVMSLEDPAGQFNEGLLIRRIRDGEHDLFYELIRPYERRVYATAF
Ga0181526_1072014513300014200BogMPEELTSLENPAEQPNEGMLIRRVCGGERDLFCQLIRPYE
Ga0182030_1144462623300014838BogMPEEVTSLENRAERFDEEMLIRRIRDGEHVLFYELIRPY
Ga0132258_1094093553300015371Arabidopsis RhizosphereMLGEVTSLNNPAEQLNEETLIRRIREGEHELFYELIRPYERRVYSAAFAILR
Ga0181505_1005878413300016750PeatlandMPEEVTSLEHPAKPFNEEMLIQRIRNGEHDLFYELIRPYERRVYSTAFAIL
Ga0187802_1036031823300017822Freshwater SedimentMPEEAISLDNPAERLNEEMLIRRIRSGEHELFYELIRPYERRVYST
Ga0187818_1027706223300017823Freshwater SedimentMPGEGISRTDPAVQFNEDMLIRRIRDGERDLFYELIRPYERRGYSAALAILRNE
Ga0187849_133268513300017929PeatlandMPEEVTSLEHPAKPFNEEMLIQRIRNGEHDLFYELIRPYERRV
Ga0187848_1026208323300017935PeatlandMPEEVTSLEHPAKPFNEEMLIQRIRNGEHDLFYELIRPYERRVY
Ga0187819_1087095113300017943Freshwater SedimentMPEELTSLENPAEQPNEGMLIRRVREGERDLFYELIRPYERRVFA
Ga0187817_1055778723300017955Freshwater SedimentMLGEGTSLENRAEQFNEELLIRRIRDGEHDLFYELVRPYER
Ga0187817_1091626713300017955Freshwater SedimentMPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELI
Ga0187778_1003494633300017961Tropical PeatlandMPEERTALEGPAAQFNEEVLIRRIRDGERDLFYELIRP
Ga0187870_105503313300017998PeatlandMPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYS
Ga0187815_1047048423300018001Freshwater SedimentMPEEVMSLGNPAGQFNEELLIRRIRDGEHDLFYELIRP
Ga0187805_1040847913300018007Freshwater SedimentMPEERTSLTDPAQQFNEEMLIRCIRDGEHDLFYELIRPYERR
Ga0187810_1030923113300018012Freshwater SedimentMLEKQTSLDTPAEQRNEGVLIRRVRDGERDLFYELIRPYERRVFAAAFAI
Ga0187889_1045476623300018023PeatlandMPEEVTSLEHSARPFSEEMLIQRIRNGEHDLFYELIRPYERRVY
Ga0187885_1040948823300018025PeatlandMPEEVTSLEHPAKLFHEEMLIQRIRNGEHDLFYELIRPYERRVY
Ga0187867_1065627323300018033PeatlandMPEEVTSLEHPAKPFNEEMLIQRIRNGEHDLFYELIRPYERRVYSTAFAILRNE
Ga0187863_1090886213300018034PeatlandMAERTTSLERPAERLDEATLIRRVREGEHELFYELIRPYERRLYAAAF
Ga0187851_1059843223300018046PeatlandMPEEATDLGNPAQELSEESLIRRIRDGEHDLFYELIRPYERRVFATALAILR
Ga0187858_1042146813300018057PeatlandMSAELNQVGNPAQQLHEQQLIQRIRDGEHELFYELI
Ga0187772_1029911533300018085Tropical PeatlandMAPGATSLDNSIDQSNEEALIRRVRDGESELFYELIHPYERRL
Ga0066669_1236770913300018482Grasslands SoilMPDDGKKLGDHTRQSNEETLIRRIRDGEHDLFYELVRPYERRVYAAA
Ga0210407_1097559423300020579SoilMPGEGTSLTDPVEQFNEEMLIGRIREGEHDLFYELIRP
Ga0210395_10002602203300020582SoilVMPGEGTSLTDAAEQFNEEMLIRRIREGEHDLFYEL
Ga0210395_1128649623300020582SoilMPEEVSLLELPAKPFNEEMLIQRIRNGEHGLFYELIRP
Ga0210404_1050145713300021088SoilMPGEGTSLTDPVEQFNEEMLIRRIREGEHDLFYELIHPYERRVYSAALAILRNEA
Ga0210406_1069880213300021168SoilMPERVMSLEQPAEQLHEAMLIRRIVAGEHELFYELIRP
Ga0210393_1110937523300021401SoilMPGEATSTDPAVQFYEEKLIRRIRDGEHDLFCELV
Ga0210383_1021006333300021407SoilMPERVMSLEQPAEQLHEAMLIRRIVAGEHELFYELIRPYERRLYATAFAIL
Ga0210410_1016659113300021479SoilMPGERTSLTDPAQQFNEEMLIRRIRDGEHDLFYELIRPYERRVY
Ga0212123_1079748223300022557Iron-Sulfur Acid SpringMHAEGASLKNPGDQFNEELLIRRIRDGEPDLFYELIRPYEGRVYSAAFAI
Ga0242657_124462713300022722SoilMPGEGTSLTDPVEQFNEEMLIRRIREGEHELFYELIHPYERRVYSAAL
Ga0224556_101236843300024295SoilMAAEVSPLDNPAQQLRERELIQRVRDGERELFYELIRP
Ga0208935_104656323300025414PeatlandVEVVISVLQWGVMPEEAISLENRAERLNEETLIRRIRDGEHELFYDLIQPYERRVYSTAFAILRNEA
Ga0208036_105989523300025419PeatlandMPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSAALAILRN
Ga0208034_102107613300025442PeatlandMPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSAALAI
Ga0208686_104815823300025500PeatlandMPGRLISLEHPAEQFNEATLIRRVRDGEHELFYQLIRPYE
Ga0208188_112059823300025507PeatlandMPEEVTSLEHPAKPFNEEMLIQRIRDGEHDIFYELIRPYE
Ga0207659_1051175333300025926Miscanthus RhizosphereMPGETTSLTDPAQQFNEEMLIRRIRDGEQELFYELVRPYERRI
Ga0209686_103079513300026315SoilMMPEGVTSLNKPAAQPSEDLLIRHIQDGEHEVFYELIRPYERCVYRTAFAILRN
Ga0209471_100383793300026318SoilMPARAAALDNPAEKLDEEVLIRRIRDGELELFHQLIRP
Ga0209471_113535213300026318SoilMPESAASLDYPAHQPDEATLIQRIRDGEHDLFYELIRPYERNVYRTAFA
Ga0209802_124577523300026328SoilMPDSAASLDNPAHQPDEATLIDRVRNGEHDLFYELIRPYERNVYR
Ga0209804_111996313300026335SoilMPGEATSLENPAEKSNEEMLIRRIRGGEHELFYELIRPYERRVYSAAFAI
Ga0257154_101760113300026467SoilMPEEAISLENPAQRLNEEMLIRRIRDGEHELFYDLI
Ga0257177_100158113300026480SoilMPERVTSLERPAEQFNEEVLIRRVVAGEHDLFYELIRPYERRVYATAFA
Ga0257164_108688723300026497SoilMPEEVTSLEPPANLFNEEMLIQRIRNGEHDLFYELIRPYERRVYS
Ga0179587_1102101213300026557Vadose Zone SoilMPERVISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVY
Ga0208730_100256513300027047Forest SoilMPGEGTSLTDPAKQFNEEMLIRRIREGEHDLFYELIRPYERRV
Ga0208199_106504813300027497Peatlands SoilMPAEAISLDDPADRMNEEMLIRRIRDGEHELFYELIRPYE
Ga0209117_115484523300027645Forest SoilMPERLISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYAAAFAI
Ga0209118_105212113300027674Forest SoilMPGEASLLENPDQLKEAKLIGRIRDGENELFYELIRPY
Ga0209039_1028651513300027825Bog Forest SoilMPGRVHSLECPAEPFNEEMLIRRVLAGEHELFYEKRIA
Ga0209060_1027453813300027826Surface SoilMPEKLTSLENPAEQPNEAMLIRRVRDGERDLFYELIR
Ga0209274_1027362313300027853SoilMPGEATSTDPALQFYEETLIRRIRDGEHDLFYELVRPYEGRVYSAALSILRNEHDAEDVS
Ga0209701_1024531713300027862Vadose Zone SoilMPERATSLDNPAEKLDEEVLIRRIRDGEHELFHELIRPYESR
Ga0209590_1027239633300027882Vadose Zone SoilMLEGMTSLNSPVERFNEETLIRRVREGEHELFYELIRPYERRVYSAALS
Ga0209590_1099020723300027882Vadose Zone SoilMPEEVTSLENQDGRFNEEMLIRRIRDGEHDLFYELIR
Ga0209275_1066315023300027884SoilMPETTASLENAGEPWNEEALIRRIREGEHELFYELIRPYERRVYA
Ga0209168_1049312723300027986Surface SoilLLENPAERSDEAMLIRRVVDGETELFYELIRPYERRLYSAALAIL
Ga0308309_1189904333300028906SoilMPEEVSLLELPAKPFNEEMLIQRIRNGEHGLFYELIRPYERR
Ga0222749_1004809213300029636SoilMLGERTSLTDPVQQFNEEMLIRRIRDGEHDLFFELIRPYERRIYSAALAIL
Ga0247275_112735223300029817SoilMPEEVISLGNPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVY
Ga0311360_1052980613300030339BogMPAEAASLENPARKSNEEVLIRRIRNGEHELFYQLIQPYERRVYATAFAI
Ga0265753_106168323300030862SoilMPGEGTSLTDAAEQFNEETLIRRIREGEHDLFYEL
Ga0073994_1000537013300030991SoilMLAAQEHSAEESNEEMLIRRIRNGEHELFYELIRPHERR
Ga0310686_10971553733300031708SoilMPEEVTSLEPLAKPFNEEMLIQRIRNGEHDLFYELIRPYERRVYSAAFA
Ga0310686_11984159613300031708SoilMPEEAISLENRAERLNEETLIRRIRDGEHELFYELIRPYERRVYST
Ga0307474_1117385113300031718Hardwood Forest SoilMVVISVMRWESMPEEATSLEDRADKLNEEMLIRRIRGGEHELFYDLIRPYERRVYSTAFAILR
Ga0318546_1074932013300031771SoilMPEQLSVLGGPAAQFNEEVLIRRIRDGERDLFYELIRPYERRVFAAALAILRN
Ga0310917_1116124323300031833SoilMLEEVTSLNSPAERFNEETLIRRVREGEHELFYELIRPYERRV
Ga0311301_1255126413300032160Peatlands SoilVMPGEGISLTDPAEQFNEEMLIRRIREGEHDLFYELIRPYERRVYS
Ga0307472_10002008763300032205Hardwood Forest SoilLPEEVTSRENQDERFNEEMLIRRIRDGEHDLFYELIRPYERRVYSAALAI
Ga0335079_1164096313300032783SoilMPEELSRLGGPAAQFNEEVLIRRIRDGERDLFYELIRPYERRVFAAAL
Ga0335084_1092468723300033004SoilMPVEVTSLSSPAERFDEEMLIRRIREGEHELFYELIRP
Ga0335077_1092502223300033158SoilMPLETTSPVDRAERSHEEELIRRIRGGEHELFYELIRPYERRVYSAAFAILRN
Ga0371490_117504713300033561Peat SoilMPGERTSLTDPAQQFNEEMLIRRIRDGEHDLFYELIRPYERRVYSAALA
Ga0334843_029572_1_1533300033825SoilMAERSMSLDRPAEQLNESILIRRIRDGEHDLFYELIRPYERRVYAAAFAIL
Ga0373958_0150244_3_1073300034819Rhizosphere SoilMPGETTSLTDPAQQFNEEMLIRRIRDGEQDLFYEL


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