Metagenome / Metatranscriptome Family F049890

Basic Information
Family ID	F049890
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	44 residues
Representative Sequence	MPEEVTSLIDPAEQFNEETLIRRIREGEHDLFYELIRPYERRVY
Number of Associated Samples	129
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.14 %
% of genes near scaffold ends (potentially truncated)	97.26 %
% of genes from short scaffolds (< 2000 bps)	91.78 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (94.521 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.959 % of family members)
Environment Ontology (ENVO)	Unclassified (20.548 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1JGI12636J13339_10260081 2JGI12635J15846_102678283 3JGI26338J50219_10263321 4Ga0062385_108330922 5Ga0062389_1009047631 6Ga0062386_1010800482 7Ga0062386_1012410421 8Ga0066672_108377441 9Ga0066690_108154101 10Ga0066388_1016709631 11Ga0066682_109517591 12Ga0070734_100254985 13Ga0070733_110461612 14Ga0066704_103115293 15Ga0066702_106055452 16Ga0070761_107239811 17Ga0066706_110371072 18Ga0070763_102955571 19Ga0070766_104197351 20Ga0070766_106335722 21Ga0075024_1005423081 22Ga0075029_1008697921 23Ga0075029_1010077301 24Ga0075029_1013490362 25Ga0075017_1003842013 26Ga0075017_1009353411 27Ga0075015_1005216032 28Ga0075015_1007729812 29Ga0075018_107235082 30Ga0070716_1000285781 31Ga0070716_1012235222 32Ga0070765_1009098551 33Ga0066665_106915201 34Ga0066659_101466793 35Ga0073928_105730632 36Ga0073928_110358592 37Ga0079219_101198013 38Ga0075435_1019550312 39Ga0099829_109752632 40Ga0099830_106833182 41Ga0066709_1006668663 42Ga0116222_12882961 43Ga0116218_13904592 44Ga0116220_100678703 45Ga0116111_10886501 46Ga0116110_12509541 47Ga0116217_105518942 48Ga0126373_105867503 49Ga0074045_107177151 50Ga0074044_110963322 51Ga0126372_127616091 52Ga0126378_122744761 53Ga0136449_1013645681 54Ga0136449_1031835491 55Ga0137393_105123913 56Ga0137380_105556423 57Ga0137380_107978741 58Ga0137360_105766162 59Ga0137360_108721021 60Ga0137361_101069461 61Ga0137361_105368062 62Ga0137390_102169341 63Ga0137419_103966301 64Ga0137410_107364342 65Ga0181533_11286531 66Ga0181526_107201451 67Ga0182030_114446262 68Ga0132258_109409355 69Ga0181505_100587841 70Ga0187802_103603182 71Ga0187818_102770622 72Ga0187849_13326851 73Ga0187848_102620832 74Ga0187819_108709511 75Ga0187817_105577872 76Ga0187817_109162671 77Ga0187778_100349463 78Ga0187870_10550331 79Ga0187815_104704842 80Ga0187805_104084791 81Ga0187810_103092311 82Ga0187889_104547662 83Ga0187885_104094882 84Ga0187867_106562732 85Ga0187863_109088621 86Ga0187851_105984322 87Ga0187858_104214681 88Ga0187772_102991153 89Ga0066669_123677091 90Ga0210407_109755942 91Ga0210395_1000260220 92Ga0210395_112864962 93Ga0210404_105014571 94Ga0210406_106988021 95Ga0210393_111093752 96Ga0210383_102100633 97Ga0210410_101665911 98Ga0212123_107974822 99Ga0242657_12446271 100Ga0224556_10123684 101Ga0208935_10465632 102Ga0208036_10598952 103Ga0208034_10210761 104Ga0208686_10481582 105Ga0208188_11205982 106Ga0207659_105117533 107Ga0209686_10307951 108Ga0209471_10038379 109Ga0209471_11353521 110Ga0209802_12457752 111Ga0209804_11199631 112Ga0257154_10176011 113Ga0257177_10015811 114Ga0257164_10868872 115Ga0179587_110210121 116Ga0208730_10025651 117Ga0208199_10650481 118Ga0209117_11548452 119Ga0209118_10521211 120Ga0209039_102865151 121Ga0209060_102745381 122Ga0209274_102736231 123Ga0209701_102453171 124Ga0209590_102723963 125Ga0209590_109902072 126Ga0209275_106631502 127Ga0209168_104931272 128Ga0308309_118990433 129Ga0222749_100480921 130Ga0247275_11273522 131Ga0311360_105298061 132Ga0265753_10616832 133Ga0073994_100053701 134Ga0310686_1097155373 135Ga0310686_1198415961 136Ga0307474_111738511 137Ga0318546_107493201 138Ga0310917_111612432 139Ga0311301_125512641 140Ga0307472_1000200876 141Ga0335079_116409631 142Ga0335084_109246872 143Ga0335077_109250222 144Ga0371490_11750471 145Ga0334843_029572_1_153 146Ga0373958_0150244_3_107
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1JGI12636J13339_10260081 2JGI12635J15846_102678283 3JGI26338J50219_10263321 4Ga0062385_108330922 5Ga0062389_1009047631 6Ga0066690_108154101 7Ga0066388_1016709631 8Ga0066682_109517591 9Ga0070734_100254985 10Ga0070733_110461612 11Ga0066704_103115293 12Ga0066702_106055452 13Ga0070766_106335722 14Ga0075024_1005423081 15Ga0075029_1010077301 16Ga0075029_1013490362 17Ga0075017_1003842013 18Ga0070716_1012235222 19Ga0066665_106915201 20Ga0066659_101466793 21Ga0099829_109752632 22Ga0099830_106833182 23Ga0116222_12882961 24Ga0074045_107177151 25Ga0137380_107978741 26Ga0137361_101069461 27Ga0137410_107364342 28Ga0181533_11286531 29Ga0182030_114446262 30Ga0187818_102770622 31Ga0187778_100349463 32Ga0187851_105984322 33Ga0187858_104214681 34Ga0187772_102991153 35Ga0066669_123677091 36Ga0210406_106988021 37Ga0210393_111093752 38Ga0210383_102100633 39Ga0212123_107974822 40Ga0224556_10123684 41Ga0208935_10465632 42Ga0209118_10521211 43Ga0209039_102865151 44Ga0209274_102736231 45Ga0209275_106631502 46Ga0209168_104931272 47Ga0073994_100053701 48Ga0335079_116409631 49Ga0335077_109250222
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44 1Ga0137380_105556423 2JGI12636J13339_10260081 3JGI26338J50219_10263321 4Ga0062389_1009047631 5Ga0066672_108377441 6Ga0066690_108154101 7Ga0066388_1016709631 8Ga0066682_109517591 9Ga0070733_110461612 10Ga0066704_103115293 11Ga0066702_106055452 12Ga0070766_106335722 13Ga0075024_1005423081 14Ga0075029_1010077301 15Ga0075029_1013490362 16Ga0075017_1003842013 17Ga0075015_1005216032 18Ga0075015_1007729812 19Ga0070716_1000285781 20Ga0070716_1012235222 21Ga0073928_105730632 22Ga0099829_109752632 23Ga0066709_1006668663 24Ga0116222_12882961 25Ga0116110_12509541 26Ga0116217_105518942 27Ga0074045_107177151 28Ga0126372_127616091 29Ga0126378_122744761 30Ga0137380_107978741 31Ga0137360_105766162 32Ga0137361_101069461 33Ga0137419_103966301 34Ga0137410_107364342 35Ga0181526_107201451 36Ga0182030_114446262 37Ga0132258_109409355 38Ga0187818_102770622 39Ga0187819_108709511 40Ga0187817_105577872 41Ga0187778_100349463 42Ga0187870_10550331 43Ga0187810_103092311 44Ga0187889_104547662 45Ga0187863_109088621 46Ga0187851_105984322 47Ga0187858_104214681 48Ga0187772_102991153 49Ga0066669_123677091 50Ga0210404_105014571 51Ga0210383_102100633 52Ga0212123_107974822 53Ga0224556_10123684 54Ga0208686_10481582 55Ga0208188_11205982 56Ga0207659_105117533 57Ga0209686_10307951 58Ga0209471_11353521 59Ga0209802_12457752 60Ga0257177_10015811 61Ga0208199_10650481 62Ga0209118_10521211 63Ga0209039_102865151 64Ga0209274_102736231 65Ga0209701_102453171 66Ga0209275_106631502 67Ga0209168_104931272 68Ga0308309_118990433 69Ga0311360_105298061 70Ga0073994_100053701 71Ga0307474_111738511 72Ga0318546_107493201 73Ga0307472_1000200876 74Ga0335084_109246872 75Ga0335077_109250222 76Ga0371490_11750471 77Ga0334843_029572_1_153
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.83% β-sheet: 0.00% Coil/Unstructured: 54.17%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF01292	Ni_hydr_CYTB	49.32
PF00033	Cytochrome_B	20.55
PF00174	Oxidored_molyb	10.96
PF00933	Glyco_hydro_3	1.37
PF00515	TPR_1	1.37
PF02685	Glucokinase	0.68
PF13414	TPR_11	0.68
PF01641	SelR	0.68
PF13899	Thioredoxin_7	0.68
PF00691	OmpA	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	49.32
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	49.32
COG3038	Cytochrome b561	Energy production and conversion [C]	49.32
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	49.32
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	49.32
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	20.55
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	10.96
COG3915	Uncharacterized conserved protein	Function unknown [S]	10.96
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	1.37
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.68

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.52 %
Unclassified	root	N/A	5.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.52 %
Unclassified	root	N/A	5.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.52 %
Unclassified	root	N/A	5.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	56.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.74 %
Unclassified	root	N/A	5.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.74 %
Unclassified	root	N/A	5.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	48.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.74 %
Unclassified	root	N/A	5.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.74 %
Unclassified	root	N/A	5.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.63 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.74 %
Unclassified	root	N/A	5.48 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.63 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.68 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.74 %
Unclassified	root	N/A	5.48 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1026008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300001593\|JGI12635J15846_10267828	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300003367\|JGI26338J50219_1026332	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300004080\|Ga0062385_10833092	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300004092\|Ga0062389_100904763	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300004152\|Ga0062386_101080048	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300004152\|Ga0062386_101241042	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005167\|Ga0066672_10837744	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005177\|Ga0066690_10815410	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	605	Open in IMG/M
3300005332\|Ga0066388_101670963	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.26%
Host-Associated	Host-Associated	2.74%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	30.82%
Plants	Host-Associated → Plants	2.74%
Terrestrial	Environmental → Terrestrial	66.44%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	22.60%
Peat	Environmental → Terrestrial → Peat	2.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.05%
Sediment	Environmental → Aquatic → Sediment	6.16%
Soil	Environmental → Terrestrial → Soil	63.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.05%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.05%
Loam	Environmental → Terrestrial → Soil → Loam	11.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.48%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.16%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.37%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.68%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.11%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.37%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.22%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.05%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.16%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M

Showing 1 to 10 of 129 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10260081	3300001154	Forest Soil	MPEEVTSLEPPANLFNEEMLIQRIRNGEHDLFYDLIRPYERRVYSAAFAILRN
JGI12635J15846_102678283	3300001593	Forest Soil	MPEEVTSLEPPAKPFNEEMLIQRIRNGEHDLFYELIR
JGI26338J50219_10263321	3300003367	Bog Forest Soil	MPEEAISLENRAERLNEEMLIRRIRDGEHELFYHLIRPYERRVYSTAFAIL
Ga0062385_108330922	3300004080	Bog Forest Soil	MPGEGTSLTDPAEQFNEEMLIRRIREGEHDLFYELIRPYERRVYS
Ga0062389_1009047631	3300004092	Bog Forest Soil	MMPEGTSLENRAEQFNEEQLIQRVRGGEHDLFYELVRPYER
Ga0062386_1010800482	3300004152	Bog Forest Soil	MREEVMSLGNPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSA
Ga0062386_1012410421	3300004152	Bog Forest Soil	MPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSA
Ga0066672_108377441	3300005167	Soil	MPEELTALEDPAQQFNEETLIQRVRDGEHDRFYALIRPYERRVYAAAFAILRNDAD
Ga0066690_108154101	3300005177	Soil	MPERVISLERPAEPFNEETLIRRVLAGERELFYELIRPYE
Ga0066388_1016709631	3300005332	Tropical Forest Soil	LGAVESTAEKINEAMLIRRIRNGEHELFYDLIRPYERRVYATTFAI
Ga0066682_109517591	3300005450	Soil	VLPRGLMPESAASLQNPARQLDEATLIERIRNGEHDLFYELIR
Ga0070734_100254985	3300005533	Surface Soil	MPEKLTSLENPAEQPNEAMLIRRVRDGERDLFYELIRPYERRV
Ga0070733_110461612	3300005541	Surface Soil	MPGEAISLENPADKLNEEMLIRRIRDGEHELFYELIR
Ga0066704_103115293	3300005557	Soil	MSAETVSLGNPAESYNEQALIRRIRDGEHEAFYQLIQPYERRVYATTFAIL
Ga0066702_106055452	3300005575	Soil	MPESATPLGHPARQTSEAELVRRVRDGEHDLFYELIRPYERRVYSAAFAIL
Ga0070761_107239811	3300005591	Soil	MPEEAISLENRADRLNEETLIRRIRDGEHELFYELIRPY
Ga0066706_110371072	3300005598	Soil	MLEEVTSLNSPAERFNEETLIRRIREGEHELFYELIRPYERRVYS
Ga0070763_102955571	3300005610	Soil	MPEGAISLENRADRLNEETLIRRIRDGEHELFYELIRPYERRVYST
Ga0070766_104197351	3300005921	Soil	MPEEAISLENRADRLNEETLIRRIRGGEHELFYELIRPYERRVYST
Ga0070766_106335722	3300005921	Soil	MPETTASLGNPSEPLHEETLIRRIREGEHELFYELIRPY
Ga0075024_1005423081	3300006047	Watersheds	MPAEAASRENSREQSDEAILIRRIRDGEHELFYELVRPYE
Ga0075029_1008697921	3300006052	Watersheds	MPGERTSRTDPAEQFNEEMLIRRIREGEHDLFYELIRPYERRVYSAA
Ga0075029_1010077301	3300006052	Watersheds	MSAEAGSLEQPAEQFEEGALIRRICGGEHELFYELIRPYERRVYAAAFAILR
Ga0075029_1013490362	3300006052	Watersheds	MPERLTLLERPAEQANEAMLIRRVRDGEQELFYELIRPYERRVYAAAFAI
Ga0075017_1003842013	3300006059	Watersheds	MPELETSRTDPAGQFNEEMLIRRIREGEHDLFYELI
Ga0075017_1009353411	3300006059	Watersheds	MPGEGISLTDPAAQFNEEMLIRRIRDGEHDLFYELIRPYER
Ga0075015_1005216032	3300006102	Watersheds	MPERMNSLERPAEQLNEAMVIRRVLAGEHDLFYELIRPYERRVYA
Ga0075015_1007729812	3300006102	Watersheds	MPEEVTSLKRPAQQFNEETLIRRVRDGENDLFYELIRPY
Ga0075018_107235082	3300006172	Watersheds	VMPEEVTSLKNPAERFNEETLIRRIREGEHELFYELIRPYERRVYSAALAI
Ga0070716_1000285781	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPEGVTSLSNPAERFTEETLIRRIREGEHELFYELIRPYER
Ga0070716_1012235222	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPEDVTSLKSAADRFNEERLIQRIREGEHELFYELIRPYERRVYSAALA
Ga0070765_1009098551	3300006176	Soil	MPGEATSLTDPAEQFNEGILIRRIRDGEHDLFYELIRPYERRVYSA
Ga0066665_106915201	3300006796	Soil	MPDSAASLDNPAHQPDEATLIDRVRNGEHDLFYELIRPYERNVYRAAFAI
Ga0066659_101466793	3300006797	Soil	MMPEGVTSLNKPAAQPSEDLLIRHIQDGEHEVFYELIRPYE
Ga0073928_105730632	3300006893	Iron-Sulfur Acid Spring	MPERLISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYA
Ga0073928_110358592	3300006893	Iron-Sulfur Acid Spring	MPERMISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYA
Ga0079219_101198013	3300006954	Agricultural Soil	MPGETTSLTDPAQQFNEEMLIRRIRDGEQELFYELVR
Ga0075435_1019550312	3300007076	Populus Rhizosphere	MPGETTSLTDPAQQFNEEMLIRRIRDGEHDLFYELIRPYERRVYSA
Ga0099829_109752632	3300009038	Vadose Zone Soil	MPAEVSSLENPAQRFNEQKLIQRIRDGEHELFYELVRPYERRIYA
Ga0099830_106833182	3300009088	Vadose Zone Soil	MPARAAALDNPAEKLDEEVLIRRIRDGEHELFHELIRPYESRV
Ga0066709_1006668663	3300009137	Grasslands Soil	MPGEATSLENPAEKSNEEMLIRRIRGGEHELFYELIRPYERRVYS
Ga0116222_12882961	3300009521	Peatlands Soil	MLAQLISLDNPADRLNEEMLIRRVREGEHELFYELIRPYERR
Ga0116218_13904592	3300009522	Peatlands Soil	MPEEAISLDNPADRLNEEMLIRRIRNGEHELFYELI
Ga0116220_100678703	3300009525	Peatlands Soil	MPAEAISLDDPADRMNEEMLIRRIRDGEHELFYELI
Ga0116111_10886501	3300009616	Peatland	MPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVY
Ga0116110_12509541	3300009643	Peatland	MPEEVTSLEHPAKPSNEGMLIQRIRNGEHDLFYELI
Ga0116217_105518942	3300009700	Peatlands Soil	MPEEAISLDNPAERLNEEMLIRRIRNGEHELFYELIQPYERRVY
Ga0126373_105867503	3300010048	Tropical Forest Soil	MLEEVTSLNSPAERFNEETLIRRIREGEHELFYELIRPYERRVYSA
Ga0074045_107177151	3300010341	Bog Forest Soil	MPGEATSLENPADRLNEETLIRRIRDGEPALFYQLIQPYERRVYSAAFAIVRNEAD
Ga0074044_110963322	3300010343	Bog Forest Soil	MMPGERTSLTDPAQQFNEQMLIRRIRDGEHDLFYELIRPYERRV
Ga0126372_127616091	3300010360	Tropical Forest Soil	MPEGVTSLSSPAERFNEEMLIRRIRDGEHELFYELVRPYERRVYSAA
Ga0126378_122744761	3300010361	Tropical Forest Soil	MLEEVTSLNSPAERFNEETLIRRVREGEHELFYELIRPYERRVY
Ga0136449_1013645681	3300010379	Peatlands Soil	MPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSAALAIL
Ga0136449_1031835491	3300010379	Peatlands Soil	MPEEVTSLEHSAKLFNEEMLIQRIRDGEHDIFYELIR
Ga0137393_105123913	3300011271	Vadose Zone Soil	MPAEVSSLENPAQRFNEQKLIQRIRDGEHELFYELIRPY
Ga0137380_105556423	3300012206	Vadose Zone Soil	MPEEVTSLIDPAEQFNEETLIRRIREGEHDLFYELIRPYERRVY
Ga0137380_107978741	3300012206	Vadose Zone Soil	MPDEAPLLDSPALQCNEQELIRRIRDGEDSLFYELIRPYERRVY
Ga0137360_105766162	3300012361	Vadose Zone Soil	MPEKVTLLERPAEQCNEATLIRRVRDGEHELFYELIRPYERRVYAAAFAIL
Ga0137360_108721021	3300012361	Vadose Zone Soil	MPERVISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYAAAF
Ga0137361_101069461	3300012362	Vadose Zone Soil	VPERVTSLESAEKFNEEMLIRRVRDGEHELFYELIRPYERRVYAA
Ga0137361_105368062	3300012362	Vadose Zone Soil	MPERVISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYER
Ga0137390_102169341	3300012363	Vadose Zone Soil	MPERVISLEHPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYAAAF
Ga0137419_103966301	3300012925	Vadose Zone Soil	MPARAAALDNPAEKLDEEVLIRRIRDGELELFHQLIRPYESRVYSAA
Ga0137410_107364342	3300012944	Vadose Zone Soil	MPDERSTLGDGSQQPSEETLIRRIRDGEHDLFYQLIRP
Ga0181533_11286531	3300014152	Bog	MREEVMSLEDPAGQFNEGLLIRRIRDGEHDLFYELIRPYERRVYATAF
Ga0181526_107201451	3300014200	Bog	MPEELTSLENPAEQPNEGMLIRRVCGGERDLFCQLIRPYE
Ga0182030_114446262	3300014838	Bog	MPEEVTSLENRAERFDEEMLIRRIRDGEHVLFYELIRPY
Ga0132258_109409355	3300015371	Arabidopsis Rhizosphere	MLGEVTSLNNPAEQLNEETLIRRIREGEHELFYELIRPYERRVYSAAFAILR
Ga0181505_100587841	3300016750	Peatland	MPEEVTSLEHPAKPFNEEMLIQRIRNGEHDLFYELIRPYERRVYSTAFAIL
Ga0187802_103603182	3300017822	Freshwater Sediment	MPEEAISLDNPAERLNEEMLIRRIRSGEHELFYELIRPYERRVYST
Ga0187818_102770622	3300017823	Freshwater Sediment	MPGEGISRTDPAVQFNEDMLIRRIRDGERDLFYELIRPYERRGYSAALAILRNE
Ga0187849_13326851	3300017929	Peatland	MPEEVTSLEHPAKPFNEEMLIQRIRNGEHDLFYELIRPYERRV
Ga0187848_102620832	3300017935	Peatland	MPEEVTSLEHPAKPFNEEMLIQRIRNGEHDLFYELIRPYERRVY
Ga0187819_108709511	3300017943	Freshwater Sediment	MPEELTSLENPAEQPNEGMLIRRVREGERDLFYELIRPYERRVFA
Ga0187817_105577872	3300017955	Freshwater Sediment	MLGEGTSLENRAEQFNEELLIRRIRDGEHDLFYELVRPYER
Ga0187817_109162671	3300017955	Freshwater Sediment	MPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELI
Ga0187778_100349463	3300017961	Tropical Peatland	MPEERTALEGPAAQFNEEVLIRRIRDGERDLFYELIRP
Ga0187870_10550331	3300017998	Peatland	MPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYS
Ga0187815_104704842	3300018001	Freshwater Sediment	MPEEVMSLGNPAGQFNEELLIRRIRDGEHDLFYELIRP
Ga0187805_104084791	3300018007	Freshwater Sediment	MPEERTSLTDPAQQFNEEMLIRCIRDGEHDLFYELIRPYERR
Ga0187810_103092311	3300018012	Freshwater Sediment	MLEKQTSLDTPAEQRNEGVLIRRVRDGERDLFYELIRPYERRVFAAAFAI
Ga0187889_104547662	3300018023	Peatland	MPEEVTSLEHSARPFSEEMLIQRIRNGEHDLFYELIRPYERRVY
Ga0187885_104094882	3300018025	Peatland	MPEEVTSLEHPAKLFHEEMLIQRIRNGEHDLFYELIRPYERRVY
Ga0187867_106562732	3300018033	Peatland	MPEEVTSLEHPAKPFNEEMLIQRIRNGEHDLFYELIRPYERRVYSTAFAILRNE
Ga0187863_109088621	3300018034	Peatland	MAERTTSLERPAERLDEATLIRRVREGEHELFYELIRPYERRLYAAAF
Ga0187851_105984322	3300018046	Peatland	MPEEATDLGNPAQELSEESLIRRIRDGEHDLFYELIRPYERRVFATALAILR
Ga0187858_104214681	3300018057	Peatland	MSAELNQVGNPAQQLHEQQLIQRIRDGEHELFYELI
Ga0187772_102991153	3300018085	Tropical Peatland	MAPGATSLDNSIDQSNEEALIRRVRDGESELFYELIHPYERRL
Ga0066669_123677091	3300018482	Grasslands Soil	MPDDGKKLGDHTRQSNEETLIRRIRDGEHDLFYELVRPYERRVYAAA
Ga0210407_109755942	3300020579	Soil	MPGEGTSLTDPVEQFNEEMLIGRIREGEHDLFYELIRP
Ga0210395_1000260220	3300020582	Soil	VMPGEGTSLTDAAEQFNEEMLIRRIREGEHDLFYEL
Ga0210395_112864962	3300020582	Soil	MPEEVSLLELPAKPFNEEMLIQRIRNGEHGLFYELIRP
Ga0210404_105014571	3300021088	Soil	MPGEGTSLTDPVEQFNEEMLIRRIREGEHDLFYELIHPYERRVYSAALAILRNEA
Ga0210406_106988021	3300021168	Soil	MPERVMSLEQPAEQLHEAMLIRRIVAGEHELFYELIRP
Ga0210393_111093752	3300021401	Soil	MPGEATSTDPAVQFYEEKLIRRIRDGEHDLFCELV
Ga0210383_102100633	3300021407	Soil	MPERVMSLEQPAEQLHEAMLIRRIVAGEHELFYELIRPYERRLYATAFAIL
Ga0210410_101665911	3300021479	Soil	MPGERTSLTDPAQQFNEEMLIRRIRDGEHDLFYELIRPYERRVY
Ga0212123_107974822	3300022557	Iron-Sulfur Acid Spring	MHAEGASLKNPGDQFNEELLIRRIRDGEPDLFYELIRPYEGRVYSAAFAI
Ga0242657_12446271	3300022722	Soil	MPGEGTSLTDPVEQFNEEMLIRRIREGEHELFYELIHPYERRVYSAAL
Ga0224556_10123684	3300024295	Soil	MAAEVSPLDNPAQQLRERELIQRVRDGERELFYELIRP
Ga0208935_10465632	3300025414	Peatland	VEVVISVLQWGVMPEEAISLENRAERLNEETLIRRIRDGEHELFYDLIQPYERRVYSTAFAILRNEA
Ga0208036_10598952	3300025419	Peatland	MPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSAALAILRN
Ga0208034_10210761	3300025442	Peatland	MPEEVMSLGSPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVYSAALAI
Ga0208686_10481582	3300025500	Peatland	MPGRLISLEHPAEQFNEATLIRRVRDGEHELFYQLIRPYE
Ga0208188_11205982	3300025507	Peatland	MPEEVTSLEHPAKPFNEEMLIQRIRDGEHDIFYELIRPYE
Ga0207659_105117533	3300025926	Miscanthus Rhizosphere	MPGETTSLTDPAQQFNEEMLIRRIRDGEQELFYELVRPYERRI
Ga0209686_10307951	3300026315	Soil	MMPEGVTSLNKPAAQPSEDLLIRHIQDGEHEVFYELIRPYERCVYRTAFAILRN
Ga0209471_10038379	3300026318	Soil	MPARAAALDNPAEKLDEEVLIRRIRDGELELFHQLIRP
Ga0209471_11353521	3300026318	Soil	MPESAASLDYPAHQPDEATLIQRIRDGEHDLFYELIRPYERNVYRTAFA
Ga0209802_12457752	3300026328	Soil	MPDSAASLDNPAHQPDEATLIDRVRNGEHDLFYELIRPYERNVYR
Ga0209804_11199631	3300026335	Soil	MPGEATSLENPAEKSNEEMLIRRIRGGEHELFYELIRPYERRVYSAAFAI
Ga0257154_10176011	3300026467	Soil	MPEEAISLENPAQRLNEEMLIRRIRDGEHELFYDLI
Ga0257177_10015811	3300026480	Soil	MPERVTSLERPAEQFNEEVLIRRVVAGEHDLFYELIRPYERRVYATAFA
Ga0257164_10868872	3300026497	Soil	MPEEVTSLEPPANLFNEEMLIQRIRNGEHDLFYELIRPYERRVYS
Ga0179587_110210121	3300026557	Vadose Zone Soil	MPERVISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVY
Ga0208730_10025651	3300027047	Forest Soil	MPGEGTSLTDPAKQFNEEMLIRRIREGEHDLFYELIRPYERRV
Ga0208199_10650481	3300027497	Peatlands Soil	MPAEAISLDDPADRMNEEMLIRRIRDGEHELFYELIRPYE
Ga0209117_11548452	3300027645	Forest Soil	MPERLISLERPAEQFNEEMLIRRVLAGEHELFYELIRPYERRVYAAAFAI
Ga0209118_10521211	3300027674	Forest Soil	MPGEASLLENPDQLKEAKLIGRIRDGENELFYELIRPY
Ga0209039_102865151	3300027825	Bog Forest Soil	MPGRVHSLECPAEPFNEEMLIRRVLAGEHELFYEKRIA
Ga0209060_102745381	3300027826	Surface Soil	MPEKLTSLENPAEQPNEAMLIRRVRDGERDLFYELIR
Ga0209274_102736231	3300027853	Soil	MPGEATSTDPALQFYEETLIRRIRDGEHDLFYELVRPYEGRVYSAALSILRNEHDAEDVS
Ga0209701_102453171	3300027862	Vadose Zone Soil	MPERATSLDNPAEKLDEEVLIRRIRDGEHELFHELIRPYESR
Ga0209590_102723963	3300027882	Vadose Zone Soil	MLEGMTSLNSPVERFNEETLIRRVREGEHELFYELIRPYERRVYSAALS
Ga0209590_109902072	3300027882	Vadose Zone Soil	MPEEVTSLENQDGRFNEEMLIRRIRDGEHDLFYELIR
Ga0209275_106631502	3300027884	Soil	MPETTASLENAGEPWNEEALIRRIREGEHELFYELIRPYERRVYA
Ga0209168_104931272	3300027986	Surface Soil	LLENPAERSDEAMLIRRVVDGETELFYELIRPYERRLYSAALAIL
Ga0308309_118990433	3300028906	Soil	MPEEVSLLELPAKPFNEEMLIQRIRNGEHGLFYELIRPYERR
Ga0222749_100480921	3300029636	Soil	MLGERTSLTDPVQQFNEEMLIRRIRDGEHDLFFELIRPYERRIYSAALAIL
Ga0247275_11273522	3300029817	Soil	MPEEVISLGNPAGQFNEELLIRRIRDGEHDLFYELIRPYERRVY
Ga0311360_105298061	3300030339	Bog	MPAEAASLENPARKSNEEVLIRRIRNGEHELFYQLIQPYERRVYATAFAI
Ga0265753_10616832	3300030862	Soil	MPGEGTSLTDAAEQFNEETLIRRIREGEHDLFYEL
Ga0073994_100053701	3300030991	Soil	MLAAQEHSAEESNEEMLIRRIRNGEHELFYELIRPHERR
Ga0310686_1097155373	3300031708	Soil	MPEEVTSLEPLAKPFNEEMLIQRIRNGEHDLFYELIRPYERRVYSAAFA
Ga0310686_1198415961	3300031708	Soil	MPEEAISLENRAERLNEETLIRRIRDGEHELFYELIRPYERRVYST
Ga0307474_111738511	3300031718	Hardwood Forest Soil	MVVISVMRWESMPEEATSLEDRADKLNEEMLIRRIRGGEHELFYDLIRPYERRVYSTAFAILR
Ga0318546_107493201	3300031771	Soil	MPEQLSVLGGPAAQFNEEVLIRRIRDGERDLFYELIRPYERRVFAAALAILRN
Ga0310917_111612432	3300031833	Soil	MLEEVTSLNSPAERFNEETLIRRVREGEHELFYELIRPYERRV
Ga0311301_125512641	3300032160	Peatlands Soil	VMPGEGISLTDPAEQFNEEMLIRRIREGEHDLFYELIRPYERRVYS
Ga0307472_1000200876	3300032205	Hardwood Forest Soil	LPEEVTSRENQDERFNEEMLIRRIRDGEHDLFYELIRPYERRVYSAALAI
Ga0335079_116409631	3300032783	Soil	MPEELSRLGGPAAQFNEEVLIRRIRDGERDLFYELIRPYERRVFAAAL
Ga0335084_109246872	3300033004	Soil	MPVEVTSLSSPAERFDEEMLIRRIREGEHELFYELIRP
Ga0335077_109250222	3300033158	Soil	MPLETTSPVDRAERSHEEELIRRIRGGEHELFYELIRPYERRVYSAAFAILRN
Ga0371490_11750471	3300033561	Peat Soil	MPGERTSLTDPAQQFNEEMLIRRIRDGEHDLFYELIRPYERRVYSAALA
Ga0334843_029572_1_153	3300033825	Soil	MAERSMSLDRPAEQLNESILIRRIRDGEHDLFYELIRPYERRVYAAAFAIL
Ga0373958_0150244_3_107	3300034819	Rhizosphere Soil	MPGETTSLTDPAQQFNEEMLIRRIRDGEQDLFYEL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049890

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences