Metagenome Family F049888

Basic Information
Family ID	F049888
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	44 residues
Representative Sequence	MITTADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLP
Number of Associated Samples	89
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.34 %
% of genes near scaffold ends (potentially truncated)	86.99 %
% of genes from short scaffolds (< 2000 bps)	86.30 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Unclassified (54.110 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (38.356 % of family members)
Environment Ontology (ENVO)	Unclassified (28.082 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.795 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.19% β-sheet: 0.00% Coil/Unstructured: 76.81%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF11774	Lsr2	4.11
PF09722	Xre_MbcA_ParS_C	4.11
PF07510	DUF1524	2.74
PF08386	Abhydrolase_4	2.74
PF13411	MerR_1	2.05
PF08447	PAS_3	1.37
PF08808	RES	1.37
PF07690	MFS_1	1.37
PF13556	HTH_30	1.37
PF12802	MarR_2	1.37
PF06736	TMEM175	1.37
PF01841	Transglut_core	0.68
PF01047	MarR	0.68
PF01544	CorA	0.68
PF00248	Aldo_ket_red	0.68
PF00289	Biotin_carb_N	0.68
PF11239	DUF3040	0.68
PF00872	Transposase_mut	0.68
PF13701	DDE_Tnp_1_4	0.68
PF04434	SWIM	0.68
PF02551	Acyl_CoA_thio	0.68
PF03781	FGE-sulfatase	0.68
PF05598	DUF772	0.68
PF04075	F420H2_quin_red	0.68
PF13276	HTH_21	0.68
PF00196	GerE	0.68
PF07452	CHRD	0.68
PF14690	zf-ISL3	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG3548	Uncharacterized membrane protein	Function unknown [S]	1.37
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	1.37
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.68
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG1946	Acyl-CoA thioesterase	Lipid transport and metabolism [I]	0.68
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.68
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.68
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.68
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
All Organisms	root	All Organisms	45.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
cellular organisms	root	All Organisms → cellular organisms	45.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.52 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.41 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	40.41 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.19 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	8.22 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.37 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.37 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.68 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.68 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	8.22 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.37 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	1.37 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.68 %
Ruaniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae	0.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.68 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	8.22 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	1.37 %
Labedaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea	0.68 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.68 %
Occultella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella	0.68 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.68 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	1.37 %
Nakamurella multipartita	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	1.37 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Hexapoda	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Insecta	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Dicondylia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Pterygota	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Neoptera	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Paraneoptera	cohort	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Hemiptera	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Sternorrhyncha	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Coccoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Coccidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.11 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	5.48 %
Rhodococcus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	1.37 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.68 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.68 %
Occultella kanbiaonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	0.68 %
Labedaea rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	0.68 %
Salinispora pacifica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02IODQZ	Not Available	670	Open in IMG/M
3300001404\|JGI20181J14860_1000936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4510	Open in IMG/M
3300001404\|JGI20181J14860_1002564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	2139	Open in IMG/M
3300002162\|JGI24139J26690_1034048	Not Available	950	Open in IMG/M
3300002162\|JGI24139J26690_1073655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300002347\|JGIcombinedJ26865_1029511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	873	Open in IMG/M
3300003369\|JGI24140J50213_10053796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1419	Open in IMG/M
3300003369\|JGI24140J50213_10255381	Not Available	538	Open in IMG/M
3300005334\|Ga0068869_100498185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1017	Open in IMG/M
3300005335\|Ga0070666_11248682	Not Available	554	Open in IMG/M
3300005337\|Ga0070682_100086420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	2042	Open in IMG/M
3300005343\|Ga0070687_100618208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M
3300005356\|Ga0070674_101718424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300005439\|Ga0070711_101856812	Not Available	529	Open in IMG/M
3300005456\|Ga0070678_100227820	Not Available	1552	Open in IMG/M
3300005578\|Ga0068854_100438229	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	1089	Open in IMG/M
3300005617\|Ga0068859_101460542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300005718\|Ga0068866_10006665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4816	Open in IMG/M
3300005841\|Ga0068863_100732689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	984	Open in IMG/M
3300005994\|Ga0066789_10345620	Not Available	622	Open in IMG/M
3300005994\|Ga0066789_10448790	Not Available	539	Open in IMG/M
3300006172\|Ga0075018_10815661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora pacifica	513	Open in IMG/M
3300006237\|Ga0097621_101517505	Not Available	636	Open in IMG/M
3300006642\|Ga0075521_10028189	Not Available	2341	Open in IMG/M
3300006642\|Ga0075521_10066411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1603	Open in IMG/M
3300006642\|Ga0075521_10101307	Not Available	1321	Open in IMG/M
3300006642\|Ga0075521_10137606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1140	Open in IMG/M
3300006642\|Ga0075521_10431837	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300006642\|Ga0075521_10478280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300006795\|Ga0075520_1227806	Not Available	781	Open in IMG/M
3300006795\|Ga0075520_1258329	Not Available	723	Open in IMG/M
3300006795\|Ga0075520_1450219	Not Available	511	Open in IMG/M
3300006881\|Ga0068865_100820275	Not Available	804	Open in IMG/M
3300009148\|Ga0105243_10003092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13693	Open in IMG/M
3300009148\|Ga0105243_10262288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1547	Open in IMG/M
3300010401\|Ga0134121_10651076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	993	Open in IMG/M
3300012985\|Ga0164308_10132624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1811	Open in IMG/M
3300012987\|Ga0164307_11857314	Not Available	511	Open in IMG/M
3300012987\|Ga0164307_11930889	Not Available	500	Open in IMG/M
3300012988\|Ga0164306_10307923	Not Available	1159	Open in IMG/M
3300012988\|Ga0164306_11180326	Not Available	641	Open in IMG/M
3300012988\|Ga0164306_11232211	Not Available	629	Open in IMG/M
3300012989\|Ga0164305_11207189	Not Available	656	Open in IMG/M
3300013296\|Ga0157374_12117074	Not Available	589	Open in IMG/M
3300013306\|Ga0163162_12237892	Not Available	628	Open in IMG/M
3300014326\|Ga0157380_10108140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2330	Open in IMG/M
3300014326\|Ga0157380_10378257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1335	Open in IMG/M
3300014326\|Ga0157380_12595580	Not Available	573	Open in IMG/M
3300014498\|Ga0182019_10061721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2199	Open in IMG/M
3300014502\|Ga0182021_10215882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	2243	Open in IMG/M
3300014969\|Ga0157376_10222943	Not Available	1747	Open in IMG/M
3300014969\|Ga0157376_11314783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Labedaea → Labedaea rhizosphaerae	753	Open in IMG/M
3300015371\|Ga0132258_11269228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1862	Open in IMG/M
3300015371\|Ga0132258_13731038	Not Available	1039	Open in IMG/M
3300015373\|Ga0132257_103148425	Not Available	601	Open in IMG/M
3300017792\|Ga0163161_10192665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1568	Open in IMG/M
3300017792\|Ga0163161_11656925	Not Available	565	Open in IMG/M
3300017965\|Ga0190266_11320395	Not Available	508	Open in IMG/M
3300018469\|Ga0190270_10888429	Not Available	908	Open in IMG/M
3300018481\|Ga0190271_12236438	Not Available	653	Open in IMG/M
3300018920\|Ga0190273_10037506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2349	Open in IMG/M
3300019767\|Ga0190267_10206966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	926	Open in IMG/M
3300019767\|Ga0190267_10615266	Not Available	676	Open in IMG/M
3300025427\|Ga0208077_1009166	Not Available	1421	Open in IMG/M
3300025461\|Ga0208851_1011052	Not Available	1895	Open in IMG/M
3300025461\|Ga0208851_1020665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1275	Open in IMG/M
3300025475\|Ga0208478_1010515	Not Available	2066	Open in IMG/M
3300025475\|Ga0208478_1063620	Not Available	677	Open in IMG/M
3300025495\|Ga0207932_1005182	All Organisms → cellular organisms → Bacteria	4216	Open in IMG/M
3300025650\|Ga0209385_1037973	Not Available	1831	Open in IMG/M
3300025878\|Ga0209584_10364092	Not Available	558	Open in IMG/M
3300025918\|Ga0207662_10601744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	765	Open in IMG/M
3300025924\|Ga0207694_10832191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	780	Open in IMG/M
3300025927\|Ga0207687_10622084	Not Available	912	Open in IMG/M
3300025937\|Ga0207669_11385776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300025938\|Ga0207704_10289634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	1249	Open in IMG/M
3300025938\|Ga0207704_10501133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	979	Open in IMG/M
3300025940\|Ga0207691_10216039	Not Available	1664	Open in IMG/M
3300025961\|Ga0207712_11700830	Not Available	565	Open in IMG/M
3300026067\|Ga0207678_10652827	Not Available	924	Open in IMG/M
3300026095\|Ga0207676_10427671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1243	Open in IMG/M
3300026121\|Ga0207683_10106855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2503	Open in IMG/M
3300026121\|Ga0207683_10153413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2079	Open in IMG/M
3300026142\|Ga0207698_10644619	Not Available	1049	Open in IMG/M
3300026291\|Ga0209890_10219037	Not Available	604	Open in IMG/M
3300028596\|Ga0247821_10804113	Not Available	620	Open in IMG/M
3300028740\|Ga0302294_10172456	Not Available	545	Open in IMG/M
3300028740\|Ga0302294_10196804	Not Available	513	Open in IMG/M
3300028770\|Ga0302258_1103330	Not Available	691	Open in IMG/M
3300028803\|Ga0307281_10210072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Ruaniaceae → Occultella → Occultella kanbiaonis	704	Open in IMG/M
3300028855\|Ga0302257_1042697	Not Available	997	Open in IMG/M
3300028868\|Ga0302163_10169749	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300028868\|Ga0302163_10197155	Not Available	556	Open in IMG/M
3300028868\|Ga0302163_10244649	Not Available	509	Open in IMG/M
3300028870\|Ga0302254_10259081	Not Available	641	Open in IMG/M
3300029980\|Ga0302298_10053884	Not Available	1205	Open in IMG/M
3300029984\|Ga0311332_10038667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3307	Open in IMG/M
3300029984\|Ga0311332_10470748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	983	Open in IMG/M
3300029984\|Ga0311332_10541478	Not Available	916	Open in IMG/M
3300029984\|Ga0311332_10556842	Not Available	903	Open in IMG/M
3300029984\|Ga0311332_10722935	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300029984\|Ga0311332_11407527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	564	Open in IMG/M
3300029987\|Ga0311334_10181326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1603	Open in IMG/M
3300029987\|Ga0311334_10798628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300029987\|Ga0311334_11066303	Not Available	674	Open in IMG/M
3300029989\|Ga0311365_10559241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	992	Open in IMG/M
3300029989\|Ga0311365_10961774	Not Available	737	Open in IMG/M
3300029990\|Ga0311336_10839068	Not Available	793	Open in IMG/M
3300029990\|Ga0311336_11554189	Not Available	582	Open in IMG/M
3300030000\|Ga0311337_10037775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	3743	Open in IMG/M
3300030000\|Ga0311337_10191591	Not Available	1675	Open in IMG/M
3300030002\|Ga0311350_11155812	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Paraneoptera → Hemiptera → Sternorrhyncha → Coccoidea → Coccidae → Rhodococcus	690	Open in IMG/M
3300030002\|Ga0311350_11334986	Not Available	638	Open in IMG/M
3300030003\|Ga0302172_10091119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	925	Open in IMG/M
3300030003\|Ga0302172_10189514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300030010\|Ga0302299_10444717	Not Available	657	Open in IMG/M
3300030294\|Ga0311349_10455303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1211	Open in IMG/M
3300030294\|Ga0311349_10677457	Not Available	973	Open in IMG/M
3300030294\|Ga0311349_11605852	Not Available	602	Open in IMG/M
3300030339\|Ga0311360_10702292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	806	Open in IMG/M
3300030491\|Ga0302211_10116585	Not Available	776	Open in IMG/M
3300030491\|Ga0302211_10275987	Not Available	500	Open in IMG/M
3300030838\|Ga0311335_10034727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3101	Open in IMG/M
3300030838\|Ga0311335_10560361	Not Available	797	Open in IMG/M
3300030838\|Ga0311335_11328747	Not Available	517	Open in IMG/M
3300030943\|Ga0311366_10181485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1818	Open in IMG/M
3300030943\|Ga0311366_11417330	Not Available	596	Open in IMG/M
3300030943\|Ga0311366_11419518	Not Available	596	Open in IMG/M
3300031232\|Ga0302323_101006858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	925	Open in IMG/M
3300031232\|Ga0302323_101036198	Not Available	912	Open in IMG/M
3300031232\|Ga0302323_102890701	Not Available	548	Open in IMG/M
3300031521\|Ga0311364_10688730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1028	Open in IMG/M
3300031521\|Ga0311364_10719971	Not Available	1003	Open in IMG/M
3300031521\|Ga0311364_12360301	Not Available	519	Open in IMG/M
3300031722\|Ga0311351_10060119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2947	Open in IMG/M
3300031722\|Ga0311351_10830065	Not Available	706	Open in IMG/M
3300031722\|Ga0311351_11347700	Not Available	548	Open in IMG/M
3300031726\|Ga0302321_101513834	Not Available	773	Open in IMG/M
3300031726\|Ga0302321_103109126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300031726\|Ga0302321_103413010	Not Available	517	Open in IMG/M
3300031902\|Ga0302322_101178691	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300031918\|Ga0311367_10162231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2351	Open in IMG/M
3300031918\|Ga0311367_10539411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1194	Open in IMG/M
3300031918\|Ga0311367_10597452	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300033550\|Ga0247829_10791175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	790	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.97%
Host-Associated	Host-Associated	25.34%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.29%
Plants	Host-Associated → Plants	25.34%
Aquatic	Environmental → Aquatic	0.68%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	39.04%
Soil	Environmental → Terrestrial → Soil	34.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.96%
Sediment	Environmental → Aquatic → Sediment	0.68%
Roots	Host-Associated → Plants → Roots	0.68%
Grass	Engineered → Solid Waste → Grass	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	39.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.42%
Loam	Environmental → Terrestrial → Soil → Loam	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.05%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%
Composting	Engineered → Solid Waste → Grass → Composting	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	39.04%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	16.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.05%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	38.36%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	16.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.37%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.37%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.37%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300001404	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012	Environmental	Open in IMG/M
3300002162	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-21A	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028740	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_3	Environmental	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029980	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030491	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049888

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_02273140	2170459014	Switchgrass, Maize And Mischanthus Litter	MIATTTAPPWLRRSDQAVTWARGMLSPHRAVVIDCETTDLPGAICEV
JGI20181J14860_10009367	3300001404	Arctic Peat Soil	TDAPGWLRRSDQAVTWACSMLTPRRAVVIDCETTDLPGALRRVPW*
JGI20181J14860_10025641	3300001404	Arctic Peat Soil	MITTDAPGWLRRSDQAVHWARTMLTPRRAVVIDCETT
JGI24139J26690_10340482	3300002162	Arctic Peat Soil	MITATADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDL
JGI24139J26690_10736551	3300002162	Arctic Peat Soil	MITTDAPAWLRRSDQAVHWARTMLTPRRAVVIDCETTDLPGGVTGNDG
JGIcombinedJ26865_10295112	3300002347	Arctic Peat Soil	MITTTADAPAWLRRSDQAVHWARTMLTPRRAVVIDCETTDLPGGVT
JGI24140J50213_100537963	3300003369	Arctic Peat Soil	MITTAAAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDL
JGI24140J50213_102553812	3300003369	Arctic Peat Soil	MMTTTAPPWLRRSDQAVTWARGMLSPHRAVVIDCETTDLPGAISGKVAVVDTEG
Ga0068869_1004981851	3300005334	Miscanthus Rhizosphere	MITTADAPPWLRRSDQAVTWARTMFQPHRAVVINCETTDLPGP*
Ga0070666_112486821	3300005335	Switchgrass Rhizosphere	MIATRSAPTWLRRSDQAVTWARTMLQPHRAVVIDWETTDLPGALTGKVGY*
Ga0070682_1000864201	3300005337	Corn Rhizosphere	MITTTDAPPWLRRSDQAVAWARTMLSPHRAVVIDCETTDLPGA
Ga0070687_1006182081	3300005343	Switchgrass Rhizosphere	MITTTDAPLWLRRSDQAVAWARAMLSPHRAVVIDCETTDLPG
Ga0070674_1017184241	3300005356	Miscanthus Rhizosphere	MITTTTAPPWLRRSDQAVTWVRTMLTPHRAVVIDCETTDLPGALTGKAGYS
Ga0070711_1018568121	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MITTTATPPWLRRSDQAVTWARTMLTPHRAVVIDCETTDLPG
Ga0070678_1002278203	3300005456	Miscanthus Rhizosphere	MIATRSAPTWLRRSDQAVTWARTMLQPHRAVVIDCETTDLPGALTGKVGY*
Ga0068854_1004382292	3300005578	Corn Rhizosphere	MITTADAPPWLRRPDQAVTWARTMLTPHRAVVIDCETTNLPGALSGKVGY*
Ga0068859_1014605421	3300005617	Switchgrass Rhizosphere	MITTTDAPLWLRRSDQAVAWARAMLSPHRAVVIDCETTDLPGALTE
Ga0068866_100066657	3300005718	Miscanthus Rhizosphere	MITTTDAPPWLRRSDQAVAWARTMLSPHRAVVIDCETTDL
Ga0068863_1007326891	3300005841	Switchgrass Rhizosphere	MITTADAPPWLRRPDQAVTWARTMLTPHRAVVIDC
Ga0068860_1000882581	3300005843	Switchgrass Rhizosphere	WLRRSDQAVTWARTMFQPHRAVVINCETTDLPGP*
Ga0066789_103456201	3300005994	Soil	MITTADAPPWLRRSDQAVTWARTMLRPGVAVVIDCETTDLPGRITG
Ga0066789_104487902	3300005994	Soil	MITTDAPAWLRRSDQAVHWARTTLAPRRAVVIDCETTDLP
Ga0075018_108156611	3300006172	Watersheds	MITTSTAPPWLRRSDQAVTWARTMLTPGRAVVIDCETTDLPGVLTGKVGF*
Ga0097621_1015175051	3300006237	Miscanthus Rhizosphere	PWLRRSDQAVTWARTMLQPHRAVVIDCETTDLPGALTGKVGY*
Ga0075521_100281891	3300006642	Arctic Peat Soil	MITTADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLP
Ga0075521_100664111	3300006642	Arctic Peat Soil	MTEVPMITATTATPAWLRRSDQAVSWARAMLQRDRAVVIDCETTDLPGAVCE
Ga0075521_101013073	3300006642	Arctic Peat Soil	VITTADAPPWLRRSDQAVTWARTMLRPGVAVVIDCETTDLPGRITGKVQGRLLEPAE*
Ga0075521_101376061	3300006642	Arctic Peat Soil	MITTDAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGGVTGND
Ga0075521_104318371	3300006642	Arctic Peat Soil	MITTTADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGGVT
Ga0075521_104782802	3300006642	Arctic Peat Soil	MITTADAPAWLRRSDQAVTWARTMLQPRRAVVIDCETTDLP
Ga0075520_12278061	3300006795	Arctic Peat Soil	MTGEVPMITATTDAPAWLRRSDQAVTWARTMLQPRRAVVIDCETT
Ga0075520_12583293	3300006795	Arctic Peat Soil	MITTAADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETT
Ga0075520_14502191	3300006795	Arctic Peat Soil	MITATTATPAWLRRSDQAVSWARAMLQRDRAVVIDCETTDLP
Ga0068865_1008202752	3300006881	Miscanthus Rhizosphere	MITTTTAPPWLRRSDQAVTWVRTMLTPHRAVVIDC
Ga0105243_100030921	3300009148	Miscanthus Rhizosphere	MITTADAPPWLRRPDQAVTWARTMLTPHRAVVIDCETTDLPGA
Ga0105243_102622882	3300009148	Miscanthus Rhizosphere	MMTTSTAPPWLRRSDQAITWARTMLQPHAAVVIDCETTDLPGAITGKSAFRTC*
Ga0134121_106510761	3300010401	Terrestrial Soil	MITTTDAPPWLRRSDQAITWARTMLTPGRAVVIDCETTD
Ga0164308_101326242	3300012985	Soil	MITTTDSPPWLRRSDQAITWARTMLQPHAAVVIDCETTDLPGAITGKSAFRTC*
Ga0164307_118573142	3300012987	Soil	MITTTDAPPWLRRSDQAVTRARTMLQPHRAVVIDCETTDLPGALSGKVGY*
Ga0164307_119308892	3300012987	Soil	MITTADPPSWLRLSDQAVTWARTMLTPHHAVVIDCEKTDLPGALVASSDIRTCRI
Ga0164306_103079232	3300012988	Soil	MIATRSAPTWLRRSDQAVTWARTMLQPHRAVVIDWETTDL
Ga0164306_111803261	3300012988	Soil	MIATTTAPTWLRRSDQAVTWARTMLSPHRAVVIDCETTDLPGALCE
Ga0164306_112322111	3300012988	Soil	MITTTATPPWLRRSDQAVTWARTMLTPHRAVVIDCETTNLPGALSGKVGY*
Ga0164305_112071892	3300012989	Soil	MITTSTAPPWLRRSDQAVTWARGMLSPHRAVVIDCETTDLPGAITGKVGY*
Ga0157374_121170741	3300013296	Miscanthus Rhizosphere	MITTVDAPPWLRRSDQAVTWARTMLQPHRAVVIDTETTDLPGALTGKVGIFEPAE*
Ga0163162_122378921	3300013306	Switchgrass Rhizosphere	PTWLRRSDQAVTWARTMLQPHRAVVIDCETTDLPGALTGKVGY*
Ga0157380_101081404	3300014326	Switchgrass Rhizosphere	MITTADAPPWLRRPDQAVTWARTMLTPHRAVVIDCETTDLPGVLCEIAVV
Ga0157380_103782571	3300014326	Switchgrass Rhizosphere	STAPPWLRRSDQAVTWARTMLQPHRAVVIDCETTDLPGSLSGKVGYSNLRN*
Ga0157380_125955801	3300014326	Switchgrass Rhizosphere	MITTSTAPTWLRRSDQAVTWARTMLQPHRAVVIDCETTDLPGAIGGNVGYS
Ga0182019_100617214	3300014498	Fen	MITTAAPAWLRRSDQAVTWARTMLTPHRAVVIDCE
Ga0182021_102158824	3300014502	Fen	MITTADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGGVTDRQA*
Ga0157376_102229433	3300014969	Miscanthus Rhizosphere	MIATRSAPTWLRRSDQAVTWARTMLQPHRAVVIDWETTDLPGALTGK
Ga0157376_113147832	3300014969	Miscanthus Rhizosphere	MMTTSTAPPWLRRSDQAITWARTMLQPHAAVVIDCETTDLPGAITGK
Ga0132258_112692281	3300015371	Arabidopsis Rhizosphere	MITTAWLRRSDQAVTWARTMLQRDHAVVIDCETPD
Ga0132258_137310382	3300015371	Arabidopsis Rhizosphere	MITTDAPAWLRRSDQAVTWARTMLQRDRAVVIDCETTDLPGGVTGNDGY
Ga0132257_1031484252	3300015373	Arabidopsis Rhizosphere	MITTAAPAWLRRSDQAVTWARTMLQRDHAVVIDCETPD
Ga0163161_101926653	3300017792	Switchgrass Rhizosphere	MITTADAPPWLRRSDQAVTWARTMFQPHRAVVINCET
Ga0163161_116569252	3300017792	Switchgrass Rhizosphere	MITTTDAPPWLRRSDQAVTWARTMFQPHRAVVINCE
Ga0190266_113203951	3300017965	Soil	MITTSTAPTWLRRSDQAVTWARGMLSPHRAVVIDCETTDLPG
Ga0190270_108884293	3300018469	Soil	MITTTEAPSWLRRSDQAITWARTMLQPHRAVVIDCE
Ga0190271_122364381	3300018481	Soil	MMTTTAPPWLRRSDQAVTWARGMLSPHRAVVIDCETTDLPGA
Ga0190273_100375063	3300018920	Soil	MIATAAAPSWLRRSDQAVTWARNMLQSHRAVVIDCETTDLPGAISGKVSY
Ga0190267_102069663	3300019767	Soil	MMTTTEPPWLRRSDQAVTWARTMLKPQYAVVIDCET
Ga0190267_106152661	3300019767	Soil	MIATAAAPSWLRRSDQAVTWARSMLSPHRAVVIDCETTDLPGAISGKVGY
Ga0208077_10091661	3300025427	Arctic Peat Soil	MITATADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGG
Ga0208851_10110523	3300025461	Arctic Peat Soil	GTPMITTADAPAWLRRSDQAVNWARTMLQPRRAVVIDCETTDLPGGVTW
Ga0208851_10206651	3300025461	Arctic Peat Soil	MITTDAPAWLRRSDQAVTWARTMLTPRRAVVIDCETT
Ga0208478_10105151	3300025475	Arctic Peat Soil	MITTTADAPAWLRRSDQAVHWARTMLTPRRAVVIDCETTDLPGAVTA
Ga0208478_10636201	3300025475	Arctic Peat Soil	MITTTDAPAWLRRSDQAVTWARTMLTPRRAVVIDC
Ga0207932_10051825	3300025495	Arctic Peat Soil	MITTDVPAWLRRSDQAVTWCPHHAPPRRAVVIDCETTDLP
Ga0209385_10379731	3300025650	Arctic Peat Soil	MITATADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGGVTGND
Ga0209584_103640921	3300025878	Arctic Peat Soil	MITTAAPAWLRRSDQAVHWARTMLTPRRAVVIDCETTDLPGGVTGNDG
Ga0207662_106017442	3300025918	Switchgrass Rhizosphere	MITTTDAPLWLRRSDQAVAWARAMLSPHRAVVIDCETTDLPGALTEV
Ga0207694_108321911	3300025924	Corn Rhizosphere	MITTTDAPPWLRRSDQAVTWARTMLHPGTAVVIDCETT
Ga0207687_106220841	3300025927	Miscanthus Rhizosphere	MITTTTAPPWLRRSDQAVTWVRTMLTPHRAVVIDCETTDLPGALTGKAGYSN
Ga0207669_113857761	3300025937	Miscanthus Rhizosphere	MITTTTAPPWLRRSDQAVTWVRTMLTPHRAVVIDCETTDLPGALT
Ga0207704_102896341	3300025938	Miscanthus Rhizosphere	MITTSTAPTWLRRSDQAVTWARTMLQPHRAVVIDCET
Ga0207704_105011331	3300025938	Miscanthus Rhizosphere	MITTTTAPPWLRRSDQAVTWVRTMLTPHRAVVIDCET
Ga0207691_102160391	3300025940	Miscanthus Rhizosphere	SPWLRRSDQAVTWARTMFQPHRAVVINCETTDLPGP
Ga0207712_117008301	3300025961	Switchgrass Rhizosphere	MITTTDAPLWLRRSDQAVAWARAMLSPHRAVVIDCE
Ga0207678_106528272	3300026067	Corn Rhizosphere	MITTTDAPTWLRRSDQAVTWARGMLSPHRAVVIDCETTDLPGAICE
Ga0207676_104276713	3300026095	Switchgrass Rhizosphere	MITTADAPPWLRRSDQAVTWARTMFQPHRAVVINCETTDLP
Ga0207683_101068552	3300026121	Miscanthus Rhizosphere	MIATRSAPTWLRRSDQAVTWARTMLQPHRAVVIDCETTDLPGALTGKVGY
Ga0207683_101534134	3300026121	Miscanthus Rhizosphere	MITTTTAPPWLRRSDQAVTWARTMLTPHHAVVIDCETTDLPG
Ga0207698_106446191	3300026142	Corn Rhizosphere	MITTTTAPPWLRRSDQAVTWARTMLTPGRAVVIDCETTDLPGALTGKVGYQN
Ga0209890_102190372	3300026291	Soil	MITTADAPPWLRRSDQAVTWARTMLRPGVAVVIDCETTD
Ga0247821_108041131	3300028596	Soil	MITTADAPAWLRRSDQAVTWARTMLQPRRAVVIDCETTDLPGGVTGNDGY
Ga0302294_101724562	3300028740	Fen	MITTAAPGWLRRSDQAVHWARTMLHPRRAVVIDCETID
Ga0302294_101968042	3300028740	Fen	MTEVPMITATTDAPAWLRRSDQAVSWARAMLQRDRAVVIDCETTDLPG
Ga0302258_11033301	3300028770	Fen	MMTTTTAPSWLRRSDQAVTWARGMLSPHRAVVIDCETTDLPGAISGKVGYSNL
Ga0307281_102100721	3300028803	Soil	WLSRSDQAVTWARTMLQRDRAVVIDCETTDLPGGVTW
Ga0302257_10426971	3300028855	Fen	MITATADAPAWLRRSDQAVTWARTMLTPRRAVVIDCE
Ga0302163_101697491	3300028868	Fen	MITTAAPAWLRRSDQAVHWARSMLTPRRAVVIDCETTDLPGGVTGN
Ga0302163_101971551	3300028868	Fen	MITTADAPAWLRRSDQAVTWARTMLTPRRAVVIDC
Ga0302163_102446491	3300028868	Fen	MITTADAPAWLRRSDQAVTWARSMLTPHRAVVIDCETTDLPGGVTGND
Ga0302254_102590811	3300028870	Fen	MITTAAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDL
Ga0302298_100538844	3300029980	Fen	MITTAAPGWLRRSDQAVHWARTMLHPRRAVVIDCETTDLP
Ga0311332_100386671	3300029984	Fen	MITTADAPAWLRRSDQAVTWARSMLTPRRAVVIDCETTDLPGGVTGNDG
Ga0311332_104707482	3300029984	Fen	MITTVAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGGV
Ga0311332_105414781	3300029984	Fen	MITTAAPGWLRRSDQAVHWARTMLTPRRAVVIDCETTDLP
Ga0311332_105568421	3300029984	Fen	MITTADAPGWLRRSDQAVTWARTMLTPRRAVVIDCETTDLP
Ga0311332_107229351	3300029984	Fen	MITTDAPAWLRRSDQAVHWARTMLTPRRAVVIDCETTDLPG
Ga0311332_114075273	3300029984	Fen	TDAPAWLRRSDQAVTRARTMLQPRRAVVIDCETTDLPGGVTRNDGYQKPAE
Ga0311334_101813261	3300029987	Fen	MITTDAPAWLRRSDQAVHWARIMLTPRRAVVIDCETTDLPGGV
Ga0311334_107986281	3300029987	Fen	MITTADAPAWLRRSDQAVTWARTMLHPRRAVVIDCETTDLPGG
Ga0311334_110663032	3300029987	Fen	MITTAAPAWLRRSDQAVTWARTMLQPRRAVVIDCETTDLPGGVTGNDGY
Ga0311365_105592412	3300029989	Fen	MITTDAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDL
Ga0311365_109617742	3300029989	Fen	MITTAAPAWLRRSDQAVTWARTMLTPRRAVVIDCE
Ga0311336_108390681	3300029990	Fen	MITTAAPAWLRRSDQAVHWARTMLTPRRAVVIDCETTDLPGGVTGND
Ga0311336_115541892	3300029990	Fen	MTEVPMITATTDAPAWLRRSDQAVSWARAMLQRDRAVVIDCET
Ga0311337_100377751	3300030000	Fen	MITTAAPAWLRRSDQAVNWARTMLQPRRAVVIDCETTDLPGGVTW
Ga0311337_101915911	3300030000	Fen	MITTAAPGWLRRSDQAVHWARTMLHPRRAVVIDCETI
Ga0311350_111558121	3300030002	Fen	MITTAAPAWLRRSDQAVTWARTMLTPRRAVVIDCETRDLPG
Ga0311350_113349861	3300030002	Fen	MITTAAPAWLRRSDQAVTWARTMLQPRRAVVIDCETTDLPGGVTG
Ga0302172_100911193	3300030003	Fen	MMTTTTAPSWLRRSDQAVTWARGMLSPHRAVVIDCETTDLPGAISGKVGY
Ga0302172_101895142	3300030003	Fen	LRRSDQAVTWARTMLQPCRAVVIDCETTDLPGGVTGNDGYQNLRE
Ga0302299_104447172	3300030010	Fen	MITTDAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGGV
Ga0311349_104553032	3300030294	Fen	MITTADAPGWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPG
Ga0311349_106774571	3300030294	Fen	MITTDAPAWLRRSDQAVTWARTMLTPRRAVVIDCDTTDLPGGV
Ga0311349_116058522	3300030294	Fen	MITTTTADAPAWLRRSDQAVTWARSMLTPRRAVVIDCETTDL
Ga0311360_107022922	3300030339	Bog	MITADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETT
Ga0302211_101165851	3300030491	Fen	MITATADAPAWLRRSDQAVTWARTMLTPRRAVVIDC
Ga0302211_102759872	3300030491	Fen	MITTAAPGWLRRSDQAVHWARTMLTPHRAVVIDCETTDLPGGVAGNDG
Ga0311335_100347275	3300030838	Fen	MITTAAAPAWLRRSDQAVHWARTMLTPRRAVVIDCET
Ga0311335_105603612	3300030838	Fen	MITTAAPAWLRRSDQAVHWARTMLTPHRAVVIDCETTDLPGGATGNDG
Ga0311335_113287471	3300030838	Fen	MITTDAPAWLRRSDQAVTWARTMLTPRRAVVIDCDTTDLPGGVTGNDG
Ga0311366_101814854	3300030943	Fen	MMTTTAPPWLRRSDQAVTWARGMLSPHRAVVIDCETTDLPGAISGK
Ga0311366_114173301	3300030943	Fen	MITATADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGGVTCN
Ga0311366_114195182	3300030943	Fen	MITTDAPAWLRRSDQAVHWARTMLTPRRAVVIDCETTDLP
Ga0302323_1010068582	3300031232	Fen	VITTADAPPWLRRSDQAVHWARTMLTPRRAVVIDCETTDLPGGL
Ga0302323_1010361981	3300031232	Fen	MITTDAPAWLRRSDQAVTWARTMLLRDRAVVIDCETT
Ga0302323_1028907012	3300031232	Fen	MITTDAPAWLRRSDQAVTWARTMLQPCRAVVIDCETTDLPG
Ga0311364_106887303	3300031521	Fen	MITTADAPAWLRRSDQAVTWARTMLHPRRAVVIDCETTDLP
Ga0311364_107199712	3300031521	Fen	MITATADAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGGVTGNDG
Ga0311364_123603012	3300031521	Fen	MITTAAPAWLRRSDQAVHWARSMLTPRRAVVIDCETTDLPGGVTGNDGY
Ga0311351_100601191	3300031722	Fen	MITTADAPAWLRRSDQAVTWARSMLTPRRAVVIDCET
Ga0311351_108300651	3300031722	Fen	MITTDAPAWLRRSDQAVHWARIMLTPRRAVVIDCETTDLPGGVT
Ga0311351_113477002	3300031722	Fen	MITTTTDAPAWLRRSDQAVHWARTMLTPRRAVVIDCETTDLP
Ga0302321_1015138341	3300031726	Fen	MITTDAPAWLRRSDQAVHWARTMLTPRRAVVIDCETTD
Ga0302321_1031091262	3300031726	Fen	MITTDAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGGVTGN
Ga0302321_1034130102	3300031726	Fen	MITTAAPGWLRRSDQAVTWARTMLQPRRAVVIDCETTDL
Ga0302322_1011786911	3300031902	Fen	MITTDAPAWLRRSDQAVTWARTMLTPRRAVVIDCET
Ga0311367_101622315	3300031918	Fen	MITTGEPPAWLRRSDQAVTWARRHMLSPRRAVVIDCETTDLPGGVTGNDGH
Ga0311367_105394111	3300031918	Fen	MITTAAPAWLRRSDQAVTWARTMLTPRRAVVIDCETTDLPGCVTEGAVVDIS
Ga0311367_105974522	3300031918	Fen	MITITTDAPAWLQRSDQAVHWARTMLHPRRAVVIDCETTDLPGGVTGN
Ga0247829_107911751	3300033550	Soil	MITTADAPPWLRRPDQAVTWARTMLTPHRAVVIDCETTDLPGALCE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign