Metagenome / Metatranscriptome Family F049844

Basic Information
Family ID	F049844
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	63 residues
Representative Sequence	MKKTGLFVLLLATAAWAQTSADGNAADAPQGTSPTSTSFPTERVQTPTYADLYCAGFISKQTLP
Number of Associated Samples	136
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.32 %
% of genes from short scaffolds (< 2000 bps)	93.15 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (97.260 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (8.904 % of family members)
Environment Ontology (ENVO)	Unclassified (26.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.849 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118 1JGI12270J11330_101801902 2JGI12659J15293_100694213 3C688J18823_108744681 4JGIcombinedJ26739_1000784171 5Ga0062385_100762472 6Ga0062387_1007876881 7Ga0062389_1008772732 8Ga0062388_1005603401 9Ga0066672_103252841 10Ga0066679_103963252 11Ga0066388_1009490711 12Ga0070734_103980801 13Ga0070731_110870731 14Ga0070733_101177541 15Ga0070732_110032961 16Ga0070762_101604471 17Ga0070762_109981721 18Ga0070740_102382472 19Ga0070740_102799502 20Ga0070763_102790883 21Ga0070764_106023863 22Ga0066903_1000159261 23Ga0075299_10433951 24Ga0070766_108193911 25Ga0070717_103437181 26Ga0070717_116910051 27Ga0075029_1011915801 28Ga0075019_100537411 29Ga0075014_1000480432 30Ga0070712_1016219612 31Ga0070765_1001683361 32Ga0070765_1008658412 33Ga0074055_113204481 34Ga0075425_1007050021 35Ga0099830_108390171 36Ga0099827_102791281 37Ga0116133_11727622 38Ga0116216_108497841 39Ga0116219_100823092 40Ga0116223_108626061 41Ga0126384_118773832 42Ga0074044_109555002 43Ga0126376_105787512 44Ga0126381_1021121521 45Ga0126383_132510582 46Ga0137388_110116702 47Ga0137383_111940852 48Ga0137399_104654872 49Ga0137380_101767581 50Ga0137379_103122881 51Ga0137384_101467461 52Ga0137396_107142471 53Ga0137359_108947721 54Ga0137404_106025761 55Ga0126369_106869692 56Ga0164309_110205131 57Ga0181531_100419541 58Ga0163163_109567672 59Ga0187802_100531042 60Ga0187821_101029942 61Ga0187817_108821682 62Ga0187779_104791422 63Ga0187778_106718891 64Ga0187780_103493003 65Ga0187782_102932732 66Ga0181520_107208241 67Ga0187805_105552721 68Ga0187873_11983191 69Ga0187875_104471192 70Ga0187871_108025672 71Ga0187784_109632112 72Ga0187769_114250522 73Ga0187771_118300622 74Ga0187770_107392192 75Ga0066669_118080492 76Ga0210395_102030291 77Ga0210405_111930421 78Ga0210396_102277561 79Ga0210393_112158582 80Ga0210389_103558061 81Ga0210387_118435211 82Ga0210391_114081402 83Ga0210390_109340152 84Ga0210392_114870931 85Ga0210402_116094741 86Ga0210409_109078061 87Ga0126371_107044062 88Ga0224547_10584121 89Ga0209171_1000944510 90Ga0207693_110538061 91Ga0208417_1070212 92Ga0209377_11682552 93Ga0209648_107611841 94Ga0207943_1106532 95Ga0209215_10593231 96Ga0209004_10336141 97Ga0209333_10723372 98Ga0208696_11382391 99Ga0209581_11519141 100Ga0209772_101646573 101Ga0209656_105307621 102Ga0209274_103344361 103Ga0209517_102089192 104Ga0209701_106111001 105Ga0209167_100319923 106Ga0209579_100906561 107Ga0209380_102312062 108Ga0209067_107733622 109Ga0209415_107633871 110Ga0209698_108749751 111Ga0209168_101490562 112Ga0265353_10292572 113Ga0137415_108547632 114Ga0302219_100220243 115Ga0302227_102747352 116Ga0302218_102159861 117Ga0308309_102023331 118Ga0308309_111395661 119Ga0311369_115129092 120Ga0302306_104333261 121Ga0302176_102734232 122Ga0311370_119260632 123Ga0302310_107604841 124Ga0265765_10359992 125Ga0170834_1099534411 126Ga0265760_100564302 127Ga0170824_1026521362 128Ga0170824_1039499842 129Ga0170824_1175526112 130Ga0170824_1250969691 131Ga0302324_1014546381 132Ga0265332_104827132 133Ga0170820_111324212 134Ga0307476_110110652 135Ga0307474_101405021 136Ga0307474_107562852 137Ga0307475_100293104 138Ga0307475_107137312 139Ga0310912_107695481 140Ga0307479_110533311 141Ga0307470_106282311 142Ga0306920_1003008681 143Ga0335074_114651202 144Ga0335072_107978781 145Ga0335083_103691401 146Ga0318519_108937601
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118 1JGI12270J11330_101801902 2JGI12659J15293_100694213 3C688J18823_108744681 4Ga0062385_100762472 5Ga0062387_1007876881 6Ga0062388_1005603401 7Ga0066679_103963252 8Ga0066388_1009490711 9Ga0070734_103980801 10Ga0070731_110870731 11Ga0070732_110032961 12Ga0070763_102790883 13Ga0070764_106023863 14Ga0066903_1000159261 15Ga0075019_100537411 16Ga0075014_1000480432 17Ga0070712_1016219612 18Ga0070765_1008658412 19Ga0074055_113204481 20Ga0075425_1007050021 21Ga0099827_102791281 22Ga0116219_100823092 23Ga0116223_108626061 24Ga0126384_118773832 25Ga0074044_109555002 26Ga0126376_105787512 27Ga0126381_1021121521 28Ga0126383_132510582 29Ga0137388_110116702 30Ga0137379_103122881 31Ga0137396_107142471 32Ga0137404_106025761 33Ga0163163_109567672 34Ga0187817_108821682 35Ga0187805_105552721 36Ga0187769_114250522 37Ga0187771_118300622 38Ga0187770_107392192 39Ga0210392_114870931 40Ga0210409_109078061 41Ga0209171_1000944510 42Ga0209215_10593231 43Ga0208696_11382391 44Ga0209415_107633871 45Ga0302218_102159861 46Ga0311370_119260632 47Ga0170824_1039499842
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1Ga0170824_1026521362 2C688J18823_108744681 3Ga0062385_100762472 4Ga0062389_1008772732 5Ga0062388_1005603401 6Ga0066672_103252841 7Ga0066679_103963252 8Ga0070734_103980801 9Ga0070762_101604471 10Ga0070762_109981721 11Ga0070764_106023863 12Ga0066903_1000159261 13Ga0070717_103437181 14Ga0070717_116910051 15Ga0075019_100537411 16Ga0075014_1000480432 17Ga0070765_1008658412 18Ga0075425_1007050021 19Ga0099830_108390171 20Ga0116223_108626061 21Ga0126376_105787512 22Ga0126383_132510582 23Ga0137383_111940852 24Ga0137399_104654872 25Ga0137380_101767581 26Ga0137379_103122881 27Ga0137396_107142471 28Ga0137404_106025761 29Ga0126369_106869692 30Ga0181531_100419541 31Ga0163163_109567672 32Ga0187821_101029942 33Ga0187817_108821682 34Ga0187779_104791422 35Ga0187778_106718891 36Ga0181520_107208241 37Ga0187805_105552721 38Ga0187873_11983191 39Ga0187875_104471192 40Ga0187871_108025672 41Ga0187784_109632112 42Ga0187769_114250522 43Ga0187770_107392192 44Ga0210395_102030291 45Ga0210405_111930421 46Ga0210393_112158582 47Ga0210389_103558061 48Ga0210392_114870931 49Ga0210409_109078061 50Ga0224547_10584121 51Ga0209171_1000944510 52Ga0208417_1070212 53Ga0207943_1106532 54Ga0209004_10336141 55Ga0208696_11382391 56Ga0209581_11519141 57Ga0209656_105307621 58Ga0209274_103344361 59Ga0209517_102089192 60Ga0209167_100319923 61Ga0209579_100906561 62Ga0209415_107633871 63Ga0209698_108749751 64Ga0209168_101490562 65Ga0302218_102159861 66Ga0308309_111395661 67Ga0302176_102734232 68Ga0311370_119260632 69Ga0170834_1099534411 70Ga0170824_1039499842 71Ga0170824_1250969691 72Ga0307476_110110652 73Ga0307474_101405021 74Ga0307475_100293104 75Ga0307479_110533311 76Ga0306920_1003008681 77Ga0335074_114651202 78Ga0335072_107978781 79Ga0335083_103691401
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.43% β-sheet: 0.00% Coil/Unstructured: 69.57%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF01487	DHquinase_I	38.36
PF08501	Shikimate_dh_N	15.75
PF06386	GvpL_GvpF	2.05
PF00248	Aldo_ket_red	0.68
PF13103	TonB_2	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0710	3-dehydroquinate dehydratase	Amino acid transport and metabolism [E]	38.36
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	15.75

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	94.52 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.79 %
Unclassified	root	N/A	2.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.79 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.79 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.42 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.11 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.42 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.74 %
Unclassified	root	N/A	2.74 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10180190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300001546\|JGI12659J15293_10069421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300001686\|C688J18823_10874468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300002245\|JGIcombinedJ26739_100078417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3061	Open in IMG/M
3300004080\|Ga0062385_10076247	All Organisms → cellular organisms → Bacteria → Acidobacteria	1549	Open in IMG/M
3300004091\|Ga0062387_100787688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300004092\|Ga0062389_100877273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1079	Open in IMG/M
3300004635\|Ga0062388_100560340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300005167\|Ga0066672_10325284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300005176\|Ga0066679_10396325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.95%
Host-Associated	Host-Associated	2.05%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	15.07%
Plants	Host-Associated → Plants	2.05%
Terrestrial	Environmental → Terrestrial	82.88%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	10.96%
Peat	Environmental → Terrestrial → Peat	6.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.37%
Roots	Host-Associated → Plants → Roots	0.68%
Sediment	Environmental → Aquatic → Sediment	3.42%
Soil	Environmental → Terrestrial → Soil	76.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Loam	Environmental → Terrestrial → Soil → Loam	16.44%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.59%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.01%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.37%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.11%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.79%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.68%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.16%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.05%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.68%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.37%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.42%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M

Showing 1 to 10 of 136 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101801902	3300000567	Peatlands Soil	MKKTGLFVLMLATAAWAQSGSADGNSADAPQGTSPTSASFPTMRVQTPTYADLYCAGFI
JGI12659J15293_100694213	3300001546	Forest Soil	MKKTLVLMLLIATSAWAQSGSDSSATDAPQGTAPTSASFPIERVPTPTYADVYCAGFISKRTL
C688J18823_108744681	3300001686	Soil	MKKTGLFVLLLATAAWAQTTTDPSTFQVPEGTAPTSNSFPVERIPTPTYAD
JGIcombinedJ26739_1000784171	3300002245	Forest Soil	MKKTGLFVLLLATAAWAQNGSDANSFEAPQGTSPTSFSFPTQRVQTPTYADLYCA
Ga0062385_100762472	3300004080	Bog Forest Soil	MAVLSGGNMKKTVMLVLFAAIFATAVWGQSGDSNATDSAPAGTAPTSASFPTERVQTPTYADLYCAGFISKQTLPD
Ga0062387_1007876881	3300004091	Bog Forest Soil	MKKTLLLVLLFATAAGAQSGSDSSATDAPQGTVPTSTSFPIERVPTPTYADVY
Ga0062389_1008772732	3300004092	Bog Forest Soil	MKKTLLLVLLIATAAWAQSGTEGSAADVPQGSVPTSKSFPVERVPTPTYADLY
Ga0062388_1005603401	3300004635	Bog Forest Soil	MKKTGLLMLLLATAAWAQSGSDSAPADAPQGTAPTSATFPTERVQTPTYADLYCAGFISKQTLPDANFVA
Ga0066672_103252841	3300005167	Soil	MKKTGLLVLLLATAAWSQSGTEGMADAPQDTTPTKNTFPTERVQTPTYADLYCAGFINKQILPDANY
Ga0066679_103963252	3300005176	Soil	MKKTGLLVLLLATAAWAQTETLGGSVEAPQGTATTTNSFPGERIQTPTYSDLYCAGF
Ga0066388_1009490711	3300005332	Tropical Forest Soil	MKKTGLLVLLLATAAGAQKAEPTPFEAPQGSSPTYVSFPVERVQTPTYSDLYCAGFISQHTLPDAHYVAGGLQ
Ga0070734_103980801	3300005533	Surface Soil	MKKTGLFVLLLATAAWTQNASELAPLEAPQGTAPTSASIPIERIPTPTYADLYC
Ga0070731_110870731	3300005538	Surface Soil	MKKTGLLVLLLATAAWAQNGVENAALEVPQGTTPTTNSFPGQRIQTPTYSDLYCAGFISKHMLPD
Ga0070733_101177541	3300005541	Surface Soil	MKKTGLLVLLLATAAWAQNGVENAALEVPQGTTPTTNSFPGQRIQTPTYSDLYCAGF
Ga0070732_110032961	3300005542	Surface Soil	MKKTGLFVLLLATAAWAQSSSDSAAPAAEAPQGTAPTTNSFPVERVQTPTYAD
Ga0070762_101604471	3300005602	Soil	MKKTGLFVLLLTTAAWAQNGSDANSANVPQGTAPTSASFPTLRVQTPTYSDLYCAGFISKQTLPDANYVAGGVQ
Ga0070762_109981721	3300005602	Soil	MKKTGLFVLLLATAAWSQSGSDATPTEIPQGTAPSTASFPTERVQTPTYADLYCAGFISKQILPD
Ga0070740_102382472	3300005607	Surface Soil	MKKTGLLVLLLATAAWAQSGDSAAPEAPQGTVPTTESFPTERVQTPTYSDLYCSGFISKH
Ga0070740_102799502	3300005607	Surface Soil	MKKTGLLMLLLATAAWAQSGDAAAPEVPQGTSPTTESFPTERVQTPTYSDLYCSGFISKQILPDANFVAG
Ga0070763_102790883	3300005610	Soil	MKKTGLFVFVLSLATAAWAQGGADASAGEAPQGTAPTTASFPTMRVQTPTYADLYCA
Ga0070764_106023863	3300005712	Soil	MKKTGLFVLLLATAAWGQSGADGDAGAAPQGTAPTTASFPTMRVQMPTYADLYCAGFISKNTLPD
Ga0066903_1000159261	3300005764	Tropical Forest Soil	MKKTGLLILLLAVAASAQDAGQAADANAPQGTAPTSVSFPTERVQTPTYADMYCAGFISKTVMPDANYVA
Ga0075299_10433951	3300005883	Rice Paddy Soil	MKKTGLLVLLLATAAWGQYAAETPAGLEAPQGTSPTTNSFPGLRVQTPTYSDLYCAGF
Ga0070766_108193911	3300005921	Soil	MKKTGLFVLLLATAAWGQGGADTDAGAAPQGTSPTTSSFPTMRVQTPTYADLYCAGFISK
Ga0070717_103437181	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTGLFLLLLATAAWAQSAADAAPSDAPQGTAPTSASFPTERVQTPTYADLYCAGFISKQILPD
Ga0070717_116910051	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTGLLVLVLATAGWAQTTTLGGTVEAPQGTSPTSNSFPGERVQAPTYSDLYCAGFISK
Ga0075029_1011915801	3300006052	Watersheds	MKKTGLFVLLLATAAWAQSSSDASAPAAEAPQGTAPTTNSFPVERVQTPTYADIYCA
Ga0075019_100537411	3300006086	Watersheds	MKKTGLLVLLLATAAWAQSTTDSSAPAAEAPQGTAPTTNSFPVERVQTPTYADVYCAGFINKQTLPD
Ga0075014_1000480432	3300006174	Watersheds	MKKTGLLVLLLATAAWAQSGSEAGSSDAPQGTSPVTASFPTERVQTPTYADLY
Ga0070712_1016219612	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTGLFVLLLATAAWAQSGTEASADPQGTSPTSNSFPTLRVQKPTYADLYCAGFISKQI
Ga0070765_1001683361	3300006176	Soil	MKKTGLFVLLLTTAAWAQNGSDANSANVPQGTAPTSASFPTLRVQTPTYSDLYCAGFISKQTLPDA
Ga0070765_1008658412	3300006176	Soil	MKKTGLFVLLLATAGWAQGVPDLSTVEAPQGTVPTSASFPVERIPTPTYADLYCAGFISKHVLPDANYIAGGLE
Ga0074055_113204481	3300006573	Soil	MRKQRSFQGGLGGKMKKTGLLILLLAVAASAQDASPAADANAPQGTAPTSVSFPIERVQTPTYADMYCAGFI
Ga0075425_1007050021	3300006854	Populus Rhizosphere	MKKTGLFLLLLATAAWGQTVDPSAFQAPEGTSPTSNSFPIERIPTPTYADLYCAGFISRQILPDANYIVGG
Ga0099830_108390171	3300009088	Vadose Zone Soil	MKKTGLFVLLLATAAWAQSGADASADPQGTSPTKASFPNERVQTPTYAD
Ga0099827_102791281	3300009090	Vadose Zone Soil	MKKTGLLVLLLAAGAWAQDAANATPEVSEGLAPTTASFPTERVQTPTYADLYCAGFISKQILPDANFVA
Ga0116133_11727622	3300009623	Peatland	MKKTGLFVLFLATTLATAAWAQDGADGNAAAEAPQGTAPTTASFPTQRVQTPTYAD
Ga0116216_108497841	3300009698	Peatlands Soil	MKKTGLFVLLLATAAWAQSGAADTPADPQGTAPTTNSFPTLRVQTPTYADLYCAGFI
Ga0116219_100823092	3300009824	Peatlands Soil	MKKTGLFVLLLATAAWAQSGADGNSADVPQGTSPTTTSFPTVRVQTPTY
Ga0116223_108626061	3300009839	Peatlands Soil	MKKTLLLVLLIATAAGAQTGNNSPAPDAPQGTWPTSKSFPTERVPTPPYADLYCAGFISKQTLPDANFITGGGESP
Ga0126384_118773832	3300010046	Tropical Forest Soil	MKKTGLLVLLLATAAGAQKAEPTPFEAPQGTSPTYVSFPVERVQTP
Ga0074044_109555002	3300010343	Bog Forest Soil	MKKTGLLLLLLATAGWAQSGADATADVPQGTVPNSASFPTERVQTPTYADLYCAGFISKQIL
Ga0126376_105787512	3300010359	Tropical Forest Soil	MKKTGLFLLLLATAAWAQDATMASAGDANAPQNTSPTSVSFPIERVQTPTYADLYCAGFINKQVLP
Ga0126381_1021121521	3300010376	Tropical Forest Soil	MKKTGLFLLFMATAVAWGQTVDPSAFQTPEGTSPTSNSFPIERIPTPTYADLYCAG
Ga0126383_132510582	3300010398	Tropical Forest Soil	MKKTGLLVLVLATAAWGQSSSDSNASADAQGTAPTTNSFPTQRVQMPTYADLYC
Ga0137388_110116702	3300012189	Vadose Zone Soil	MKKTGLFVLLLATAAWAQSGADATADPQGTAPTTTSFPTLRVQTPTYADLYCAGFISKQILPDANFVAGGLQT
Ga0137383_111940852	3300012199	Vadose Zone Soil	MKKTGLFVLLLATAAWAQNAPEGNSTQAPEGTSPVTASFPTERVQTPTYADLY
Ga0137399_104654872	3300012203	Vadose Zone Soil	MKKTGLLVLLLATGAWAQDAANATAEVSEGLAPTTASFPTERVQTPTYADLYCAGFISKQILPDANFVAGGL
Ga0137380_101767581	3300012206	Vadose Zone Soil	MKKTGLFVLLLATAAWAQSGTEAAPDPQGTAPTSNSFPNLRVQTPTYADLYCAGFLSKQTLPDANYVAGGLQTPS
Ga0137379_103122881	3300012209	Vadose Zone Soil	MKKTGLFVLLLATAAWTQTATEAAADPQGTAPTTNSFPTLRVQTPTYSD
Ga0137384_101467461	3300012357	Vadose Zone Soil	MKKTGLFVLLLATAAWAQSGTEAAPDPQGTAPTSNSFPNLRVQTPTYADLYC
Ga0137396_107142471	3300012918	Vadose Zone Soil	MKKTGLLLVLLAAAAWAQSTENNTSDASTVPTSTSFPTERVATPTYADIYCAGFINKQTL
Ga0137359_108947721	3300012923	Vadose Zone Soil	MKKTGLFLLLLATAAWAQSAADAAPSDVAQGTAPTSASFPTERVQTPTYADLYC
Ga0137404_106025761	3300012929	Vadose Zone Soil	MKKTGLLVLFVAILATAVWAQSNDSAAPDAAPQGTAPTSASFPTQRVQTPTYADLYCAGFISKQTLPDANYIAGGLQ
Ga0126369_106869692	3300012971	Tropical Forest Soil	MKKTGLFVLLLATAAWGQAPPDLSTVQAPEGTAPTSNSFPVERIPQPTYADLYCAGFISKHVLPDANYIAGGL
Ga0164309_110205131	3300012984	Soil	MKKTGLLMLLLATAAWAQTTDPSTFQAPEGTTPTTNSFPVERIPTPTYADLYC
Ga0181531_100419541	3300014169	Bog	MKKTLVLMLLIATSAWAQSGSDSSATDAPQGTVPTSASFPIERVPTPTYADVYCAGFISKRTLPDANFISGGLETPT
Ga0163163_109567672	3300014325	Switchgrass Rhizosphere	MKKTGLFLVLLAAAAVAQDAAPADANAPQNTVPTSRSFPTQRVQTPTYADLYCAGFIN
Ga0187802_100531042	3300017822	Freshwater Sediment	MKKTGLFVLLLVTAAWAQSGADGNSFEVPQGTSPTTNSFPTQRVQTPTYADLYCAGFISKQILPDA
Ga0187821_101029942	3300017936	Freshwater Sediment	MKKTGLLLLLLTAAAWSQTTDPSTFQAPEGTSPTTNSFPIERIPTPTYADLYCAGFISKHILPDANY
Ga0187817_108821682	3300017955	Freshwater Sediment	MKKTGLLVLLFAATAWAQSEIAPMPEAPQGTVPTNATFPAERVQTPTFADLYCAGFINK
Ga0187779_104791422	3300017959	Tropical Peatland	MKKTGLLVLLLATAAWAQKAETTPFEAPQGTSPTFVSFPVERVQTPTYSDLYCAGFISKHTLPDAHYVAGGLQTP
Ga0187778_106718891	3300017961	Tropical Peatland	MKKTGLLVLVLATAAWAQNAADAGAPEVPQGTVPTTATFPGERVQTPTYADLYCAGFISK
Ga0187780_103493003	3300017973	Tropical Peatland	MKKTGLFVLLLATASWAQSGADASSAEAPQGTSPTSASFPTERVQTPTYADLYCAGFINKQVLPDAN
Ga0187782_102932732	3300017975	Tropical Peatland	MKKTGLFVLLLATACWAQSASDATSTDVPQGTSPTSNSFPVERVQTPTYADLYCAGFINK
Ga0181520_107208241	3300017988	Bog	MKKTGLFVFVLWLATAAWAQGGADASAGEAPQGTSPTTGSFPTMRVQTPTY
Ga0187805_105552721	3300018007	Freshwater Sediment	MGRSARGVLSGGNMKKTGLLGLFVLVLASAVWAQSDDTASPGAAPAGTAPTTASFPVERVQTPTYADLYC
Ga0187873_11983191	3300018013	Peatland	MKKTGLFVLLLATAAWAQGGPDGNSADTPQGTSPTSVSFPTMRVQTPTYADLYCAGFISKQTLPDANF
Ga0187875_104471192	3300018035	Peatland	MKKTGLFVLFLATTLATAAWAQDGADGNAAAEAPQGTAPTTASFPTQRVQTPTYADLYCAGFISKQTLP
Ga0187871_108025672	3300018042	Peatland	MKKTLLLVLLIATAAGAQSGSESSATDAPQGTVPTSTSFPIERVPTPTYADVYCAGFISRQKLPDANFIS
Ga0187784_109632112	3300018062	Tropical Peatland	MKKTGLFVLLLATASWAQSGTDATSTDVPQGTSPTSNSFPVERVQTPTYADLYCAGFINKQTLPDAN
Ga0187769_114250522	3300018086	Tropical Peatland	MKKIGLLVLLVATAAWAQSGGDSTEAPQGTSPTAVSFPVMRVQTPTYADLYCAGFIN
Ga0187771_118300622	3300018088	Tropical Peatland	VILSGGNMKKTGLFVLLLATASWAQSGADANSAEAPQGTSPNSASFPTMRVQTPTYA
Ga0187770_107392192	3300018090	Tropical Peatland	MKKTGLLVMLLATAAWAQTAVDGSSSDAGSSDTPTGTVQTTASFPIERVPTPTYADLYCAGFISRQILPDSKYVSGGLQTPGTTK
Ga0066669_118080492	3300018482	Grasslands Soil	MKKTGLLVLLLATAAWAQTTDPATFQAPEGTSPTTNSFPIERIPTPTYA
Ga0210395_102030291	3300020582	Soil	MKKTGLFVLLLTTAAWAQSGADGNPFEAPQGTSPTTNSFPTQRVQTPTYADLYCAGFISKQTLPDANFVAGG
Ga0210405_111930421	3300021171	Soil	MKKTGLFVLLLATAAWAQTGTEATADPQGTSATSTSFPTLRVQTPTYADLYCAGFISKQILPDANYVAG
Ga0210396_102277561	3300021180	Soil	MKKTGLLVLFVAIFAMAVWAQSGDSAAPDAAPQGTAPTSASFPTQRVQTPTYADLYCAGFIRKQ
Ga0210393_112158582	3300021401	Soil	MKKTGLFVLLLATAAWAQGGADAPADPQGTSPTSNSFPTQRVQTPTYADLYCAGFISKQILPDANFI
Ga0210389_103558061	3300021404	Soil	MKKTGLFVLLFATAVWAQGGSDATAAETPEGTTPTTRSFPTLRVQTPTYADLYCAGFISKQTLPDANYVAGGLETP
Ga0210387_118435211	3300021405	Soil	MKKTGLFVLLLATAAWAQGGADAPADPQGTSPTSNSFPTQRVQTPTYADLYCAGFIS
Ga0210391_114081402	3300021433	Soil	MKKTGLFVLLLATAAWAQSGAADAPADPQGTAPTTNSFPTLRVQTPTYADLYCAGFISK
Ga0210390_109340152	3300021474	Soil	MKKTGLLVLLLATAAWAQTTDPATFQAPEGTTPTTNSFPIERIPTPTYADLYCAGFISKHILPD
Ga0210392_114870931	3300021475	Soil	MKKTGLLMVVLATAAWAQTSADTTSADTPAGTVLSTASFPTQRVQTPTYADVYCAGFINKQIL
Ga0210402_116094741	3300021478	Soil	MKKTGLFVLLLATTAWAQSGADGNPFEAPQGTSPTTNSFPTQRVQTPTYADLYCAGFISK
Ga0210409_109078061	3300021559	Soil	MKKTGLFVLLLVTAAWAQSGADGNSAVAPAGTSPTTASFPTLRVQTPTYADLYCA
Ga0126371_107044062	3300021560	Tropical Forest Soil	MKKTGLFVLLLATAAWAQSSSDTSAPAAEVPQGTAPTSNSFPVERVQTP
Ga0224547_10584121	3300023255	Soil	MKKTGLFLLLLATAAWAQSDSEATPFEAPQGTAPTAASFPTERVQTPTYSDLYCAGFISRKTLPDANYVAG
Ga0209171_1000944510	3300025320	Iron-Sulfur Acid Spring	MKKTGLLVLLLATAAWAQSAADGSSAPASPAGTLSTTAGFPIQGVQTPTYADVY
Ga0207693_110538061	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTGLFVLLLATAAWAQSGTEASADPQGTSPTSNSFPTLRVQKPTYADLYCAGFISKQILPDSSYVAGGLQTPS
Ga0208417_1070212	3300025999	Rice Paddy Soil	MKKTGLLVLLLATAAWGQYAAETPAGLEAPQGTSPTTNSFPGLRVQTPTYSDLYCAGFISKQTLPD
Ga0209377_11682552	3300026334	Soil	MKKTGLLVLLLATAAWAQTTDPATFQAPEGTSPTTNSFPIERIPTPTYADLYCAGFISKHILPD
Ga0209648_107611841	3300026551	Grasslands Soil	MKKTGLFLFLLATAAWAQSAADGTPSDAPQGTAPTSATFPTERVQTPTYADLYCAGFINK
Ga0207943_1106532	3300027089	Forest Soil	MKKTGLLVLLLATAAWAQSGADGAANDAPQGTLPTSASFPSERVQTPTYADMYCAGFISRQMLPDAN
Ga0209215_10593231	3300027266	Forest Soil	MKKTGLLVLLLATAAWAQTTDPATFQAPEGTTPTTNSFPIERIPTPTYADLYCAGFISR
Ga0209004_10336141	3300027376	Forest Soil	MKKTGLLVLLLATAAWAQTTDPATFQAPEGTTPTTNSFPIERIPTPTYADLYCAGFISRHILPDSNYIIGGIH
Ga0209333_10723372	3300027676	Forest Soil	MKKTGLFVLLLATAAWAQNGSDANSFEAPQGTSPTSFSFPTQRVQTPTYADLY
Ga0208696_11382391	3300027696	Peatlands Soil	MKKTGLLLLVLATAGWAQSAADGASADQNSPQGTAPTTAGFPTERVQTASYADVYCAGFINKQTLP
Ga0209581_11519141	3300027706	Surface Soil	MKKTGLLVLLLATAAWAQSGDSAAPEAPQGTVPTTESFPTERVQTPTYSDLYCSGFISKHILP
Ga0209772_101646573	3300027768	Bog Forest Soil	MKKTLLLVLLFATAAGAQSGSDSSATDAPQGTVPTSTSFPIERVPTPTYADVYCAGFISR
Ga0209656_105307621	3300027812	Bog Forest Soil	MKKTGLFVLLLATASWAQSGADANSAEAPQGTSPNSASFPTMRVQTPTYADVYCAGFINKQTLPDAN
Ga0209274_103344361	3300027853	Soil	MKKTGLLVLLFATAAWAQSGSASNAPEAPQGTVPTSASFPTERVQTPTYADMYCAGFISKQMLPDANWVLGGLQTPS
Ga0209517_102089192	3300027854	Peatlands Soil	MKKTGLFVLLLATAAWAQSGADGNSADVPQGTSPTTTSFPTVRVQTPTYSDLYCAGFISKQILPDANFVAGGLQTP
Ga0209701_106111001	3300027862	Vadose Zone Soil	MKKTGLFLLLLATAAWAQSAADAASSDVPQGTAPTSASFPTERVQTPTYADLY
Ga0209167_100319923	3300027867	Surface Soil	MKKTLLLVLVIATAAWAQSGGDSSATDAPQGTVPTSKSVPIERVPTPTYADVYCAGFI
Ga0209579_100906561	3300027869	Surface Soil	MKKTGLLVLLLATAAWAQNGVENAALEAPQGTAPTTNSFPGQRIQTPTYSDLYCAGFISKHVLPDANFVA
Ga0209380_102312062	3300027889	Soil	MKKTGLFVLLLATAAWGQGGADTDAGAAPQGTSPTTSSFPTMRVQTPTYADLYCAGFI
Ga0209067_107733622	3300027898	Watersheds	MKKTGLLVLLLATAAWAQSTTDSSAPAAEAPQGTAPTTNSFPVERVQTPTYADVYCAGFINKQTLPDANYV
Ga0209415_107633871	3300027905	Peatlands Soil	MKKTGLLVLLLATAAWAQTDASGNAVEAPQGTSPTKDSFPTERVQTPTYAD
Ga0209698_108749751	3300027911	Watersheds	MKKTGLFVLLLATATWAQSGPDANSAEVPQGTSPTTASFPTERVQTPTYADLYCAGFISKQLLPDANYIAGGLQ
Ga0209168_101490562	3300027986	Surface Soil	MKKTGLLVLLLATAAWAQSGADGSAAEAPQGTSPTSNSFPTQRVQTPTYADLYCAGFISKQILPDANYVAGAA
Ga0265353_10292572	3300028015	Soil	MKKTLLLVLLIATAAGAQSGSDSSATDAPQGTVPTSNSFPIERVPTPTYADVYCAGFINKQKLPDAN
Ga0137415_108547632	3300028536	Vadose Zone Soil	MKKTGLFLLLIATAAWAQSAADGTPSDAPQGTAPTSATFPTERVQTPTYADLYCAGFIN
Ga0302219_100220243	3300028747	Palsa	MKKTGLFVLVLVSLLATAAWAQGGADAISGEAPQGTAPTSASFPTMRVQTPTYADLYC
Ga0302227_102747352	3300028795	Palsa	MKKTLLLVLLIATAAWAQSGSDSSATDAPQGTIPTATSFPIERVPTPTYADLYCAGFIS
Ga0302218_102159861	3300028863	Palsa	MKKIGLLVILLATAAWAQNAVEGTSTEGGMPDSPQGTAPTTASFPTERIPTPTYADLYCAGFISKQILPDANYVSGGWESPSTTKY
Ga0308309_102023331	3300028906	Soil	MKKTGLLMLLLATAAWAQGGSGADGSSADTPQGTSPTSASFPTMRVQTPTYADLYCAGFISKQTLPDANFVAGGMQT
Ga0308309_111395661	3300028906	Soil	MKKTGLLVVLLATACWAQSGDSGDGAVAAEVPQGTAPSTASFPTERVQTPTYADLYCAGFINKQTLPD
Ga0311369_115129092	3300029910	Palsa	MKKTLLLVLLIATAAGAQSGSDSSATDAPQGTIPTSTSFPIERVPTPTYADVYCAGFISKRTLPDANFISGGLETPT
Ga0302306_104333261	3300030043	Palsa	MKKIGLLVILLATAAWAQNAVEGTSTEGGMPDSPQGTAPTTASFPTERIPTPTYADLYCAGFISKQIL
Ga0302176_102734232	3300030057	Palsa	MKKTGLFVLVLVSLLATAAWAQGGADAISGEAPQGTAPTSASFPTMRVQTPTYADLYCAGFISKQMLPDAN
Ga0311370_119260632	3300030503	Palsa	MKKTGLFVMLLATSFATLPATGAWAQSGADGNTADAPQGTTPTSASFPILRVMTPTYADLYCAGFISKQSL
Ga0302310_107604841	3300030737	Palsa	MKKIGLLVILLATAAWAQNAVEGTSTEGGMPDSPQGTAPTTASFPTERIPTPTYADLYCAGFISKQILPDANYVSGGW
Ga0265765_10359992	3300030879	Soil	MKKTLLLVLLIATAAGAQSGSDSSATDAPQGTVPTSNSFPIERVPTPTYADVYCAGFINKQKLPDANFISGGLET
Ga0170834_1099534411	3300031057	Forest Soil	MKKTGLFVLLLATAGWAQSGTDAAAEPQGTAPTTSSFPTMRVQTPTYADLYCAGFISKQILPDANFVAGGLQ
Ga0265760_100564302	3300031090	Soil	MKKTGLFVLLLATAAWAQGGADAPADPQGTSPTSNSFPTQRVQTPTYADLYCAGFISK
Ga0170824_1026521362	3300031231	Forest Soil	MKKTGLFVLLLATAAWAQTSADGNAADAPQGTSPTSTSFPTERVQTPTYADLYCAGFISKQTLP
Ga0170824_1039499842	3300031231	Forest Soil	MKKTGLFVLLLATAAWAQSGTEASADPQGTAPSTVSFPTLRIQTPNYA
Ga0170824_1175526112	3300031231	Forest Soil	MKKTGLFVLLLATAAWAQSGADASADPQGTSPTKASFPTERVQTPTYADLYCAGFISK
Ga0170824_1250969691	3300031231	Forest Soil	MKKTGLFVLLLATAAWAQGGSDANTFEAPQGTSPTTVSFPTLRVQTPTYADLYCAG
Ga0302324_1014546381	3300031236	Palsa	MKKTLLLVLLIATAAGAQSGSDSSATDAPQGTIPTSTSFPIERVPTPTYADVYC
Ga0265332_104827132	3300031238	Rhizosphere	MKKTGLFVLLLATAAWAQGGADATADPQGTSATTNSFPTQRVQTPTYADLYCAGFISKQILPDANFIAG
Ga0170820_111324212	3300031446	Forest Soil	MKKTGLFVLLLATAAWAQSGADASADPQGTSPTKASFPTERVQTPTYADLYCAGFIS
Ga0307476_110110652	3300031715	Hardwood Forest Soil	MKKTGLFVLLMATAAWAQSGPDVNAFEAPQGTSATTMSFPTMRFQSPSYADLYCAGFISKQNLPDANYVAGGLET
Ga0307474_101405021	3300031718	Hardwood Forest Soil	MKKTGLLVLLLATAAWAQSGTEGVTDAPQGTEPTKPTFPSVRVQTPTYADLYCAGFINK
Ga0307474_107562852	3300031718	Hardwood Forest Soil	MKKTGLFVLLLTTAVWAQSGPDANSADAPQGTSPTTVSFPTMRVQTPTYADLYCAGFISKQTLPDANY
Ga0307475_100293104	3300031754	Hardwood Forest Soil	MKKTGLLLLLLATAGWAQSGQDATADVPQGTAPSSASFPTERVQTPTYADLYCAGFISKQILPDANY
Ga0307475_107137312	3300031754	Hardwood Forest Soil	MKKTGLFVLLLVTAAWAQSGSDANSADTPQGTSPTTASFPTERVQTPTYADLYCAGFISKQILPDANFVAGGL
Ga0310912_107695481	3300031941	Soil	MKKTGLFLLLLATAAWGQTVEPSAFQAPEGTSPTSNSFPIERIPTPTYADLYCAGFISRQILPDANYII
Ga0307479_110533311	3300031962	Hardwood Forest Soil	MKKTGLFALLLLTTAAWAQSGPDANSIEAPQGTAPSTVSFPTMRVQTPTYADLYCAGFI
Ga0307470_106282311	3300032174	Hardwood Forest Soil	MGKQRSFQGGLGGKMKKTGLLILLWAVAASAQDASPAADANAPQGTAPTSVSFPIERVQTPTYADMYC
Ga0306920_1003008681	3300032261	Soil	MKKTGLLVLLLATTAAWGQTTDPANFQAPDKTAPTTASFPIERIPTPTYAD
Ga0335074_114651202	3300032895	Soil	MKKTGMFVLLLLATAAWGQSAQTSEEAPQGTLPTSVSFPTQRVQTPTYADLYCAGFISKQTLPDANYVAGGL
Ga0335072_107978781	3300032898	Soil	MKKTGLFVLLLATAAWAQAGQSSDEAPQGTAPTSVSFSVERVQTPTYADLYCAGFISKQTLPDANYVAG
Ga0335083_103691401	3300032954	Soil	MKKIGLLVLLLATAAWAQGGSDNATPEAPQGTVPTTESFPTERVQTPTYSDLYCAGFISKQTLPDANFVA
Ga0318519_108937601	3300033290	Soil	MKKTGLFLLLLATAAWGQTVEPSAFQAPEGTSPTSNSFPIERIPTPTYADLY

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049844

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences