NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049836

Metagenome / Metatranscriptome Family F049836

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049836
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 46 residues
Representative Sequence EATLLAKTYVTAAISNGHPLGRGTGPVHHLYRMNQQRRAAGSGSES
Number of Associated Samples 125
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.32 %
% of genes from short scaffolds (< 2000 bps) 92.47 %
Associated GOLD sequencing projects 120
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(18.493 % of family members)
Environment Ontology (ENVO) Unclassified
(28.767 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.849 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.
1A2_c1_00158320
2JGI12270J11330_100370381
3JGI1027J12803_1076551563
4JGI12659J15293_100143381
5Ga0062387_1011948832
6Ga0062389_1010346002
7Ga0058896_14247962
8Ga0058888_14067382
9Ga0058882_18196821
10Ga0058905_15929832
11Ga0062386_1013810272
12Ga0062595_1003061752
13Ga0058863_113818241
14Ga0066690_108479632
15Ga0066678_105361451
16Ga0068869_1014315421
17Ga0070733_112172871
18Ga0070732_104680522
19Ga0070761_100120031
20Ga0070764_102506831
21Ga0070764_103846881
22Ga0070764_105512411
23Ga0075290_10013474
24Ga0070717_117578281
25Ga0075019_102192641
26Ga0075015_1006924972
27Ga0075014_1003014482
28Ga0070765_1006579442
29Ga0070765_1016075621
30Ga0075021_103794662
31Ga0116129_11599391
32Ga0116113_11886591
33Ga0116215_14846192
34Ga0116224_102767441
35Ga0126373_106506692
36Ga0074044_104038863
37Ga0126370_108755431
38Ga0126378_102205211
39Ga0126378_115176751
40Ga0126381_1002142331
41Ga0136449_1004646003
42Ga0136449_1008511151
43Ga0150983_121039433
44Ga0150983_122910881
45Ga0150983_125118021
46Ga0150983_167162752
47Ga0150983_167277091
48Ga0150985_1022873321
49Ga0137395_102390441
50Ga0137419_110730052
51Ga0157374_102125823
52Ga0181531_100091967
53Ga0181525_102892941
54Ga0182005_10955742
55Ga0182036_104838291
56Ga0187820_10803221
57Ga0187801_101699291
58Ga0187803_102655851
59Ga0187853_101595901
60Ga0187817_101164481
61Ga0187817_104263102
62Ga0187817_104725542
63Ga0187778_102640711
64Ga0187778_112973311
65Ga0187804_101085142
66Ga0187805_102317361
67Ga0187874_101648941
68Ga0187871_102502211
69Ga0187871_107621741
70Ga0187887_103267771
71Ga0187770_107026682
72Ga0066662_103131672
73Ga0181510_10945862
74Ga0187798_19086182
75Ga0187800_12354692
76Ga0193726_11288282
77Ga0210408_113362041
78Ga0210393_112252401
79Ga0210397_112237302
80Ga0210384_101286611
81Ga0210384_116919091
82Ga0210402_100812194
83Ga0126371_108179412
84Ga0242652_10177151
85Ga0242659_10885822
86Ga0242663_10676941
87Ga0242656_10554961
88Ga0242656_10949323
89Ga0242664_10637882
90Ga0242660_10569052
91Ga0242660_10836812
92Ga0242655_101020981
93Ga0242655_101368702
94Ga0242662_101289491
95Ga0242661_10644322
96Ga0242666_11229392
97Ga0242657_10682712
98Ga0242665_101525511
99Ga0224570_1029911
100Ga0224558_11924582
101Ga0208936_10638601
102Ga0208039_10537832
103Ga0207663_116692113
104Ga0207700_106440051
105Ga0208776_10207181
106Ga0257154_10061871
107Ga0257158_11079161
108Ga0209215_10292501
109Ga0208324_11261391
110Ga0208696_11362162
111Ga0209167_106505091
112Ga0209006_107968972
113Ga0209526_108985261
114Ga0302234_104965602
115Ga0308309_114157711
116Ga0302188_102240382
117Ga0311372_114458791
118Ga0311356_104945063
119Ga0265392_10704952
120Ga0302317_103615332
121Ga0310039_101839901
122Ga0310039_103162982
123Ga0265460_127022311
124Ga0265461_109975422
125Ga0302312_102112562
126Ga0265762_10301902
127Ga0265720_10060383
128Ga0075372_113683262
129Ga0170834_1083095202
130Ga0302307_103618241
131Ga0302325_105671723
132Ga0302325_108517211
133Ga0302326_109291212
134Ga0310686_1011671471
135Ga0307476_100341641
136Ga0307474_103876401
137Ga0307469_100992061
138Ga0307475_110863391
139Ga0307478_101414731
140Ga0306923_115235201
141Ga0307479_104275083
142Ga0307479_114717941
143Ga0307479_120383592
144Ga0335081_104406973
145Ga0335072_112937501
146Ga0335076_115478351
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 40.54%    β-sheet: 0.00%    Coil/Unstructured: 59.46%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

51015202530354045EATLLAKTYVTAAISNGHPLGRGTGPVHHLYRMNQQRRAAGSGSESSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Bog
Peatland
Freshwater Sediment
Watersheds
Soil
Vadose Zone Soil
Tropical Forest Soil
Surface Soil
Peatlands Soil
Soil
Soil
Soil
Grasslands Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Rice Paddy Soil
Peatland
Tropical Peatland
Bog Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Palsa
Bog
Host-Associated
Avena Fatua Rhizosphere
Miscanthus Rhizosphere
Rhizosphere
Rhizosphere
Miscanthus Rhizosphere
4.1%5.5%4.1%6.2%18.5%5.5%8.9%4.8%6.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2_c1_001583202124908043SoilAEAALLAKTYVTAAISNGHPLGRGTGPVHHLYRMSQQRRAAGSGSAES
JGI12270J11330_1003703813300000567Peatlands SoilLAEAALLAKTYVTAAISNGHPLGRGTGPVHHLYRMTQQRRAAGSGNES*
JGI1027J12803_10765515633300000955SoilAEATLLAKTYVSAAISNGQSLGKGIGPVHHLYRMTQQRRAASTGSEST*
JGI12659J15293_1001433813300001546Forest SoilLDRGLAEAALLAKTYVTAAISNGQTVGKGTGPVNHLYRMNQQRRAAGSGSESS*
Ga0062387_10119488323300004091Bog Forest SoilDRGLAEAALLAKTYVTAAISNGHPLGRGTGPVHHLYRMSQQRRAAGSGSET*
Ga0062389_10103460023300004092Bog Forest SoilEAALLAKTYVTAAIANGHPLGRGTGPVHHLYRMGQQRRAAGSGSSES*
Ga0058896_142479623300004101Forest SoilKTYVTAAISNGQPLGKGIGPVHHLYRMSLQRRAAGSGGEST*
Ga0058888_140673823300004102Forest SoilLLAKTYVTAAISNGQPLGKGIGPVHHLYRMSLQRRAAGSGGEST*
Ga0058882_181968213300004121Forest SoilAEAALLAKTFVTAAIAAGHPLGRGTGPVHHLYRMNQQRRATGTGSES*
Ga0058905_159298323300004138Forest SoilLAKTYVTAAISNGQPLGKGIGPVHHLYRMSLQRRAAGSGGEST*
Ga0062386_10138102723300004152Bog Forest SoilTYVGAAISYGQPLGRGTGPVHHLYRMGQQRRAAGSGSES*
Ga0062595_10030617523300004479SoilATSMACHLGLDRGLAEATLLAKTYVGAAIANAQMLGKGTGPVHHLYRMTQQRRASSTSGE
Ga0058863_1138182413300004799Host-AssociatedLSKTYVGAAIANAQILGKGTGPVHHLYRMTQQRRATSTSGE*
Ga0066690_1084796323300005177SoilAEATLLAKTYVTAAISNGHPVGRGTDPVHHLYRMGQQRRAAGSGEA*
Ga0066678_1053614513300005181SoilEATLLAKTYVTSAIANAYPLGKGTGPVHHLYRMYQQRRAAGSRE*
Ga0068869_10143154213300005334Miscanthus RhizosphereGVAEATLLAKTYVSAAIMNAQTLGKGTGPVHHLYRMHQQRRATTSGGEPN*
Ga0070733_1121728713300005541Surface SoilLALDRGIAEAALLAKTYVTAAIAAGHHLGRGTSPVHHLYRMHEQRRGAGSGSTS*
Ga0070732_1046805223300005542Surface SoilRGLAEATLLAKTYVTAAISNGQPLGKGIGPVHHLYRMSLQRRAAGSGGEST*
Ga0070761_1001200313300005591SoilALGRGLAEAALLAKTYVTAAISYGHDLGRGTGPVHHLYRLGQQRRAASSGDES*
Ga0070764_1025068313300005712SoilLAKTYVTAAISYGHALGQGTGPVHHLYRMSQQRRAAGSGSDH*
Ga0070764_1038468813300005712SoilHLALDRGLAEAALLAKTYVTAAISNGHPLGKGNGPVHHLYRMGQQRRAAGSGSES*
Ga0070764_1055124113300005712SoilGLAEAALLAKTYVTAAIANGHPLGRGTDPIHHLYRMGQQRRAAGSGSSES*
Ga0075290_100134743300005889Rice Paddy SoilTLLAKTYVSAAIMNAQTLGKGTGPVHHLYRMHQQRRATTSGGEPN*
Ga0070717_1175782813300006028Corn, Switchgrass And Miscanthus RhizosphereLAEAALLAKTYVTAAISNAHPLGKGTGPVNHLYRMGQQRRALGSGGEP*
Ga0075019_1021926413300006086WatershedsAEATLLAKTYVTAAIANGHPLGKGTGPVHHLYRMGQQRRAAGTGNEPN*
Ga0075015_10069249723300006102WatershedsHLAMDRGLAEATLLAKTYVTAAISNGQSLGKGTGPVHHLYRMNQQRRAAGTGSES*
Ga0075014_10030144823300006174WatershedsHLAMDRGLAEATLLAKTYVTAAISNGQSLGKGTGPVHHLYRMSQQRRAAGTGSES*
Ga0070765_10065794423300006176SoilEAALLAKTYVTAAITNGHPLGRGTGPVHHLYRMNQQRRAAGSGSES*
Ga0070765_10160756213300006176SoilKTYVTAAISYGHDLGRGTGPVHHLYRLGQQRRAASSGDES*
Ga0075021_1037946623300006354WatershedsLLAKTYVTAAITNGHPLGKGIGPVNHLYRMSQQRRAAGSGGQES*
Ga0116129_115993913300009633PeatlandEATLLAKTYVTAAIAAGRPVGRGNGPVNHLYRMNQQRRAVAVGSKDQDWTLRD*
Ga0116113_118865913300009638PeatlandALLAKTYVTAAITNAHPLGRGTGPVHHLYRMSQQRRAAGSGSEQS*
Ga0116215_148461923300009672Peatlands SoilAEAALLAKTYVTAAIANGHPLGRGTDPVHHLYRMGQQRRAAGSGGSES*
Ga0116224_1027674413300009683Peatlands SoilDRGLAEAALLAKTYVSAAISNGHPLGRGTGPVHHLYRMSQQRRAAGSGNES*
Ga0126373_1065066923300010048Tropical Forest SoilAEATLLAKTYVAAAISYGHPLGKGKGVGPVHHLYRMSQQRRAAGTGGEESN*
Ga0074044_1040388633300010343Bog Forest SoilYVTAAIANGHPLGRGTDPIHHLYRMGQQRRAAGSGGESQ*
Ga0126370_1087554313300010358Tropical Forest SoilKTYVTAAIANGQTLGKGTGPVHHLYRMSQQRRAASTGGESA*
Ga0126378_1022052113300010361Tropical Forest SoilAISNGHSLGKGTDPVHHLYRMNQQRRAARTGGEVS*
Ga0126378_1151767513300010361Tropical Forest SoilKTYVTAAITYAHPLGRGVGPVHHLYRMNQQRRAAGTGGSES*
Ga0126381_10021423313300010376Tropical Forest SoilVTAAIMNGQPLGKGTGPVNHLYRMNQQRRAASSGSEAS*
Ga0136449_10046460033300010379Peatlands SoilLDRGLAEAALLAKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRGASSGSES*
Ga0136449_10085111513300010379Peatlands SoilALDRGIAEAALLAKTYVAAAISYGHPLGRGTGPVHHLYRMSQQRRAAGTGGES*
Ga0150983_1210394333300011120Forest SoilGGLAEATLLAKTYVTAAISNGQPLGKGIGPVHHLYRMSQQRRAAGSGSEST*
Ga0150983_1229108813300011120Forest SoilLAKTYVTAAISYGHPLGRGTGPVHHLYRMSQQRRAAGSGEEP*
Ga0150983_1251180213300011120Forest SoilLAKTYVTAAISYGHDLGRGTGPVHHLYRLGQQRRTASSGDES*
Ga0150983_1671627523300011120Forest SoilLAEAALLAKTYVTAAIANGHPLGHGTGPVHHFYRMGQHRRAMGSGSEN*
Ga0150983_1672770913300011120Forest SoilYVTAAISNGQTVGKGTGPVNHLYRMNQQRRAAGSGSESS*
Ga0150985_10228733213300012212Avena Fatua RhizosphereHLALERGVAEATLLAKTYVSAAIMNAQSLGKGTGPVHHLYRMHQQRRATTSGGEPN*
Ga0137395_1023904413300012917Vadose Zone SoilGIAEATQKAKTYVNAAIAAGHSLGRGTNPIHHFYRMNEQRREAGSGSSE*
Ga0137419_1107300523300012925Vadose Zone SoilALDRGLAEAALLAKTYVTAAIAAGHPLGRGNGPVHHLYRMNQQRRAAGSGNES*
Ga0157374_1021258233300013296Miscanthus RhizosphereVGAAIANAQMLGKGTGPVHHLYRMTQQRRATSTSGE*
Ga0181531_1000919673300014169BogAEATLLAKTYVSAAIAAGHPLGRGTDPVYHLYRMKQQKRAVSEK*
Ga0181525_1028929413300014654BogEATLLAKTYVTAAITNAHPLGRGTGPVHHLYRMSQQRRAAGSGSEE*
Ga0182005_109557423300015265RhizosphereDRGLAEATLLAKTYVGAAIANAQILGKGTGPVHHLYRMTQQRRATSTSGE*
Ga0182036_1048382913300016270SoilIAEATLLAKIYVTAAISNGHALGKGVGPVHHLYRMNQQRRAAGSGSESS
Ga0187820_108032213300017924Freshwater SedimentATLLAKTYVTAAITNGQPLGKGIGPVHHLYRMTQQRRAAGTGSESN
Ga0187801_1016992913300017933Freshwater SedimentLLAKTYVSAAISNGQSLGKGTGPVHHLYRMNQQRRAAGSGSESS
Ga0187803_1026558513300017934Freshwater SedimentAKTYVTAAITNGHPLGRGTGPVHHLYRMSQQRRAAGSGSGEP
Ga0187853_1015959013300017940PeatlandEAALLAKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRAAGSGSES
Ga0187817_1011644813300017955Freshwater SedimentLDRGLAEATLLAKTYVTAAIANGQPLGKGTGPVNHLYRMNQQRRAAGTGGSGESS
Ga0187817_1042631023300017955Freshwater SedimentAKTYVTAAISAGHPLGRGNGPVHHLYRMNQQRRGASSGSES
Ga0187817_1047255423300017955Freshwater SedimentEATLLAKTYVTAAISNGHPLGRGTGPVHHLYRMNQQRRAAGSGSES
Ga0187778_1026407113300017961Tropical PeatlandTLLAKTYVTAAITYGHPLGHGIGPVHHLYRMNQQRRAAGTGSES
Ga0187778_1129733113300017961Tropical PeatlandKTYVSAAISNGQPLGHGTGPVHHLYRMNQQRRAAGTPGES
Ga0187804_1010851423300018006Freshwater SedimentCHLALDRGLAEAALLSKTYVSAAISNGHPLGRGTGPVNHLYRMTQQRRAAGSGSES
Ga0187805_1023173613300018007Freshwater SedimentTLLAKTYVSAAIANGQPLGKGTGPVNHLYRMNQQRRAAGTGGSGESS
Ga0187874_1016489413300018019PeatlandAEAALLAKTYVTAAIANGHPLGRGTDPIHHLYRMGQQRRAAGSGGESQ
Ga0187871_1025022113300018042PeatlandKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRAAGSGGES
Ga0187871_1076217413300018042PeatlandAALLAKTYVTAAIAAGHPLGRGTAPVHHLYRMHEQRRSAGSGNKS
Ga0187887_1032677713300018043PeatlandGLAEAALLAKTYVSAAIANGHPLGRGTGPVHHLYRMSQQRRAAGSGAEE
Ga0187770_1070266823300018090Tropical PeatlandLLAKAYVASAISHAHPLGHGTGPVHHLYRMFQQKRGVGSSG
Ga0066662_1031316723300018468Grasslands SoilALDRGLAEATLLAKTYVTAAITNGQSLGHGTGPVHHLYRMNQQRRAAGTGGDA
Ga0181510_109458623300019240PeatlandYVAAAITAGHPLGRGTGPVHHLYRMNQQRRAVGNGGE
Ga0187798_190861823300019275PeatlandLLAKTYVTAAITYGHPLGHGTGPVHHLYRMNQQRRAAAPGNES
Ga0187800_123546923300019278PeatlandAEATLLAKTYVSAAIANGHPLGKGTGPVHHLYRMSQQRRAAGSGSEG
Ga0193726_112882823300020021SoilAKTYVTAAISSGHDLGRGAGPVNHLYRMGQQRRTAVSGSEG
Ga0210408_1133620413300021178SoilEAALLAKTYVTAAISYGHPLGRGASPVHHLYRMGQQRRGAGSGGET
Ga0210393_1122524013300021401SoilAEAALLAKTYVTAAIAAGHPVGRGTDPVHHLYRMHQQRRAAGTGSES
Ga0210397_1122373023300021403SoilYVTAAISNGQTVGKGTGPVNHLYRMSQQRRAAGSGSESS
Ga0210384_1012866113300021432SoilLAKTYVTSAIANAYPLGKGTGPVHHLYRMYQQRRAAGSRE
Ga0210384_1169190913300021432SoilEAALLAKTYVTAAITNGHPLGRGTGPVHHLYRMNQQRRAAGSGSES
Ga0210402_1008121943300021478SoilRGIAEAALLAKIYVAAAISYGHPLGKGIGPVHHLYRMSQQRRAVGSGGES
Ga0126371_1081794123300021560Tropical Forest SoilALDRGLAEAALLAKTYVTAAISYGHPLGKGVGPVHHLYRMSQQRRAAGTGGGESS
Ga0242652_101771513300022510SoilLAKTYVTAAISYGHDLGRGTGPVHHLYRLGQQRRAASSGDEG
Ga0242659_108858223300022522SoilAAISNGQTVGKGTGPVNHLYRMNQQRRAAGSGSESS
Ga0242663_106769413300022523SoilKTYVTAAISNGQPLGKGIGPVHHLYRMSLQRRAAGSGGELT
Ga0242656_105549613300022525SoilVTAAISAGHTLGHGNGPVHHLYRMHEQRRAAGSGSES
Ga0242656_109493233300022525SoilLAKTYVTAAITNAHPLGRGTGPVHHLYRMSQQRRAAGSGSSESSGHEGGV
Ga0242664_106378823300022527SoilAFDRGLAEATLLAKTYVTAAISNGQPLGKGIGPVHHLYRMSLQRRAAGSGGEST
Ga0242660_105690523300022531SoilVTAAIANGHPLGKGIGPVHHLYRMSQQRRAAGSGGNES
Ga0242660_108368123300022531SoilAKTYVTSAIANAYPLGKGTGPVHHLYRMYQQRRGAGSRE
Ga0242655_1010209813300022532SoilVAKTYVTAAISNGQNVGRGTGPVHHLYRMNQQRRAAVSGSEE
Ga0242655_1013687023300022532SoilEAALLAKTYVTAAISYGHPLGRGTGPVHHLYRMSQQRRAAGSGEEP
Ga0242662_1012894913300022533SoilLALERGLAEAALLAKTYVTAAISAGHTLGHGNGPVHHLYRMHEQRRAAGSGSES
Ga0242661_106443223300022717SoilALLAKTYVTAAISAGHTLGHGNGPVHHLYRMHEQRRAAGSGSES
Ga0242666_112293923300022721SoilGLAEAARLAKTYVTAAISFGHQVGRGVGPIHHLYRMSQQRRAAGTGSET
Ga0242657_106827123300022722SoilLAEAALLAKTYVTAAISFGQQLGRGVGPIHHLYRMSQQRRAAGTGSET
Ga0242665_1015255113300022724SoilHLALDRGLAEAALLAKTYVTAAISFGHPLGRGVGPIHHLYRMGQQRRAVGTGSET
Ga0224570_10299113300022730RhizosphereGLAEAALLAKTYVTAAISYGHDLGRGTGPVHHLYRLGQQRRAASSGDES
Ga0224558_119245823300023090SoilAEAALLAKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRAASSGSES
Ga0208936_106386013300025404PeatlandALLAKTYVTAAITNAHPLGRGTGPVHHLYRMSQQRRAAGSGSEQS
Ga0208039_105378323300025454PeatlandYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRAPTSGSES
Ga0207663_1166921133300025916Corn, Switchgrass And Miscanthus RhizosphereLAEATLLAKTYVGAAIANAQMLGKGTGPVHHLYRMTQQRRATSTSGE
Ga0207700_1064400513300025928Corn, Switchgrass And Miscanthus RhizosphereAKTYVTAAIANGHPLGRGTGPVHHLYRMSQQRRAAGSGSSEA
Ga0208776_102071813300026014Rice Paddy SoilAEATLLAKTYVSAAIMNAQTLGKGTGPVHHLYRMHQQRRATTSGGEPN
Ga0257154_100618713300026467SoilLPEAALLAKTYVTAAIANGHPLGRGTDPVHHLYRMSQQRRAAGSGNET
Ga0257158_110791613300026515SoilLLAKTYVTSAIANAHPLGKGTGPVHHLYRMYQQRRAAGSGNEQ
Ga0209215_102925013300027266Forest SoilDRGLAEATLLAKTYVTAAIANGQPLGKGTGPVNHLYRMNQQRRAAGTSR
Ga0208324_112613913300027604Peatlands SoilPAAKTYVTAAISNGHPLGRGTGPVHHLYRMNQQRRAAGSGTES
Ga0208696_113621623300027696Peatlands SoilDRGLAEAALLAKTYVSAAISNGHPLGRGTGPVHHLYRMSQQRRAAGSGNES
Ga0209167_1065050913300027867Surface SoilGLAEATLLAKTYVTAAIANGQSLGKGTGPVNHLYRMNQQRRAAGTGGSGEHS
Ga0209006_1079689723300027908Forest SoilAKTYVSAAITYGQSLGKGTGPVHHLYRMSQQRRAAGSGGTES
Ga0209526_1089852613300028047Forest SoilEAALLAKTYVTAAIAAGHPVGRGTDPVHHLYRMHQQRRAAGTGSES
Ga0302234_1049656023300028773PalsaIYVTAAITNGHPLGRGTGPVHHLYRMSQQRRAAGSGSSECPGHEGGV
Ga0308309_1141577113300028906SoilLDRGLAEAALLAKTYVAAAISYGQPIGRGTGPVHHLYRMGQQRRAASGSGSGSES
Ga0302188_1022403823300029986BogAALLAKTYVAAAIAAGHPLGRGTGPVHHLYRMNQQRRAAGNGGE
Ga0311372_1144587913300030520PalsaERGLAEAALLAKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRAAGSGRES
Ga0311356_1049450633300030617PalsaDRGLAEAALLAKTYVTAAIAAGHDLGRGTGPVNHLYRMNQQRRASGSGNES
Ga0265392_107049523300030623SoilAEAALLAKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRAAGWGSES
Ga0302317_1036153323300030677PalsaLLAKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRAAGSGKES
Ga0310039_1018399013300030706Peatlands SoilEATLLAKTYISAAIAAGHPLGRGTGPVHHLYRMNQQRRGASPGSES
Ga0310039_1031629823300030706Peatlands SoilLDRGLAEAALLAKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRGASSGSES
Ga0265460_1270223113300030740SoilLAEATLLAKIYVMAAITAGHPLGRGPSPIHHLYRMNEQRRAAASGIES
Ga0265461_1099754223300030743SoilLAKTYVTAAIAAGHPLGRGAGPVHHLYRMNQQRRAAGTGSES
Ga0302312_1021125623300030746PalsaAALLAKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRAAGSGKES
Ga0265762_103019023300030760SoilAAISYGHELGRGIGPVHHLYRLGQQRRAASSGDES
Ga0265720_100603833300030764SoilALNRGLAEATLLAKTYVTAAITNAHPLGRGTGPVHHLYRMSQQRRAAGSGNES
Ga0075372_1136832623300030853SoilTFFHFHLALDRGLAEAALLAKTYVTAAITNGHPLGRGTGPVHHLYRMSQQRRATGSGSSE
Ga0170834_10830952023300031057Forest SoilALDRGLAEAALLAKTYVTAAIANGHPLGRGTDPVNHLYRMGQQRRAAGSGNES
Ga0302307_1036182413300031233PalsaCHLALDRGLAEATLLAKTYVSAAIAAGHPLGRGTDPVYHLYRMKQQKRAVSEK
Ga0302325_1056717233300031234PalsaLAEAALLAKSYVTAAIAAGHPLGHGTGPVNHLYRMSQQRRASGSVSGNES
Ga0302325_1085172113300031234PalsaLDRGLAEATLLAKTYVTAAIAAGHPLGRGNGPVNHLYRMNQQRRAVASGSEL
Ga0302326_1092912123300031525PalsaAEATLLAKTYVSAAIASAQPLGRGVGPVHHLYRREQRRRAAGSGDET
Ga0310686_10116714713300031708SoilHLALDRGLAEAALLAKTYVTAAISYGHALGRGTGPVHHLYRMGQQRRAAGSGSEA
Ga0307476_1003416413300031715Hardwood Forest SoilRGLAEAALLAKTYVTAAIAAGHPVGRGTDPVHHLYRMHQQRRAAGTGNES
Ga0307474_1038764013300031718Hardwood Forest SoilWAEAALLAKTYVTAAISYGHPLGRGTGPVHHLYRMGQQRRAVASGQAES
Ga0307469_1009920613300031720Hardwood Forest SoilALLAKTFVTAAIAAGHPLGRGTGPVHHLYRMHEQRRAAGTGNKG
Ga0307475_1108633913300031754Hardwood Forest SoilRGLAEAALLAKTYVTAAIAAGHPLGRGTDPVHHLYRMHQQRRAAGTGSES
Ga0307478_1014147313300031823Hardwood Forest SoilALLAKTYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRGASSGSES
Ga0306923_1152352013300031910SoilRGLAEATLLAKTYVSAAISNGQVLGKGTGPVHHLYRMNQQRRAAGSGNETS
Ga0307479_1042750833300031962Hardwood Forest SoilYVTAAIAAGHPLGRGTGPVHHLYRMNQQRRGAGSGG
Ga0307479_1147179413300031962Hardwood Forest SoilEATLLAKTYVSAAIAAGHPLGRGTGPVNHLYRMHQQRRAAGSGDQS
Ga0307479_1203835923300031962Hardwood Forest SoilTLLAKTYVTAAISAGHPLGRGKGPVHHLYRMNQQRRAAGSGSKS
Ga0335081_1044069733300032892SoilYVTAAISNGQTLGHGTGPVHHLYRMNQQRRAAGSGSAES
Ga0335072_1129375013300032898SoilLALDRGLAEATLLAKTYVSAAISYGQPLGKGTGPVHHLYRMSQQRRAAGSGGGESH
Ga0335076_1154783513300032955SoilALLAKTYVSAAISNAHPLGRGTGPVHHLYRMAQQRRAASTANES


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.