Metagenome / Metatranscriptome Family F049825

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049825
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	76 residues
Representative Sequence	MKKSLTLLAALFLSATVAAAGPKPQSGNILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQP
Number of Associated Samples	112
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.55 %
% of genes near scaffold ends (potentially truncated)	95.89 %
% of genes from short scaffolds (< 2000 bps)	89.73 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.260 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.027 % of family members)
Environment Ontology (ENVO)	Unclassified (34.247 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 18.75% β-sheet: 35.42% Coil/Unstructured: 45.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF04366	Ysc84	2.74
PF02371	Transposase_20	2.05
PF07885	Ion_trans_2	1.37
PF00924	MS_channel	1.37
PF13590	DUF4136	1.37
PF13505	OMP_b-brl	1.37
PF13936	HTH_38	1.37
PF00691	OmpA	1.37
PF04203	Sortase	1.37
PF12680	SnoaL_2	1.37
PF01548	DEDD_Tnp_IS110	0.68
PF01914	MarC	0.68
PF00999	Na_H_Exchanger	0.68
PF01904	DUF72	0.68
PF05974	DUF892	0.68
PF04264	YceI	0.68
PF01909	NTP_transf_2	0.68
PF01494	FAD_binding_3	0.68
PF13565	HTH_32	0.68
PF06742	DUF1214	0.68
PF11937	DUF3455	0.68
PF07228	SpoIIE	0.68
PF07635	PSCyt1	0.68
PF00196	GerE	0.68
PF13191	AAA_16	0.68
PF00072	Response_reg	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.74
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	2.74
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.37
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	1.37
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.37
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.37
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.68
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.68
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.68
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.68
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.68
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.68
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.68
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.68
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.68
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.68
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.68
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.68
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.68
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	88.36 %
Unclassified	root	N/A	2.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.37 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.42 %
Unclassified	root	N/A	2.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.27 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.74 %
Unclassified	root	N/A	2.74 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.68 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.68 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.74 %
Unclassified	root	N/A	2.74 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.68 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.68 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.27 %
Unclassified	root	N/A	2.74 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.68 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.27 %
Unclassified	root	N/A	2.74 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.68 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.68 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.27 %
Unclassified	root	N/A	2.74 %
Pseudomonas sp. GP01-A4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GP01-A4	0.68 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.68 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502001\|FACENC_GAMC6GA01B0H55	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
2189573001\|GZR05M101CIM4Q	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
2189573004\|GZGWRS401CLRCM	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100649975	All Organisms → cellular organisms → Bacteria → Acidobacteria	974	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105177701	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300000789\|JGI1027J11758_12151672	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300000789\|JGI1027J11758_12323906	All Organisms → cellular organisms → Bacteria → Acidobacteria	850	Open in IMG/M
3300000955\|JGI1027J12803_100098620	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300000955\|JGI1027J12803_103141976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	842	Open in IMG/M
3300000955\|JGI1027J12803_103229941	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300002899\|JGIcombinedJ43975_10078011	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300002911\|JGI25390J43892_10121949	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300004635\|Ga0062388_102617431	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300005353\|Ga0070669_100715375	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300005356\|Ga0070674_101618490	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300005367\|Ga0070667_101425585	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300005437\|Ga0070710_11284987	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300005459\|Ga0068867_100878035	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300005542\|Ga0070732_10813152	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300005591\|Ga0070761_10215965	All Organisms → cellular organisms → Bacteria → Acidobacteria	1140	Open in IMG/M
3300006028\|Ga0070717_10894740	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300006050\|Ga0075028_100962097	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300006174\|Ga0075014_100952525	Not Available	517	Open in IMG/M
3300006176\|Ga0070765_101022515	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300006176\|Ga0070765_101366776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300006237\|Ga0097621_101872193	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300006755\|Ga0079222_10968177	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300006804\|Ga0079221_11039814	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300006852\|Ga0075433_11603593	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300006854\|Ga0075425_100229898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2134	Open in IMG/M
3300006881\|Ga0068865_100948803	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300006904\|Ga0075424_100941936	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300009176\|Ga0105242_10637185	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300010362\|Ga0126377_12223252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GP01-A4	625	Open in IMG/M
3300010375\|Ga0105239_10594937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1261	Open in IMG/M
3300010375\|Ga0105239_12063204	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300010398\|Ga0126383_12745599	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300010399\|Ga0134127_12177825	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300010868\|Ga0124844_1034473	All Organisms → cellular organisms → Bacteria → Acidobacteria	1652	Open in IMG/M
3300011106\|Ga0151489_1744093	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300011120\|Ga0150983_15254508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300012202\|Ga0137363_11409450	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300012924\|Ga0137413_10942768	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300012960\|Ga0164301_11704539	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300012961\|Ga0164302_10315477	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300012971\|Ga0126369_11551429	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300012986\|Ga0164304_11715018	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300013307\|Ga0157372_10543576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1354	Open in IMG/M
3300014150\|Ga0134081_10165083	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300015373\|Ga0132257_101436337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300015374\|Ga0132255_103720151	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300016341\|Ga0182035_10794175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300016341\|Ga0182035_11859630	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300016371\|Ga0182034_11922217	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300016422\|Ga0182039_10177187	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300017928\|Ga0187806_1143522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300017932\|Ga0187814_10294350	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300017943\|Ga0187819_10634854	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300017955\|Ga0187817_10537620	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300017995\|Ga0187816_10017931	All Organisms → cellular organisms → Bacteria → Acidobacteria	2741	Open in IMG/M
3300020579\|Ga0210407_11077102	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300020580\|Ga0210403_10095590	Not Available	2406	Open in IMG/M
3300020580\|Ga0210403_10951927	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300020580\|Ga0210403_11117240	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300020580\|Ga0210403_11494223	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300020582\|Ga0210395_10779181	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	714	Open in IMG/M
3300020583\|Ga0210401_10172511	All Organisms → cellular organisms → Bacteria → Acidobacteria	2017	Open in IMG/M
3300021168\|Ga0210406_10721343	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300021168\|Ga0210406_10956367	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300021171\|Ga0210405_10006661	All Organisms → cellular organisms → Bacteria → Acidobacteria	10267	Open in IMG/M
3300021178\|Ga0210408_10891391	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300021180\|Ga0210396_10136687	All Organisms → cellular organisms → Bacteria → Acidobacteria	2207	Open in IMG/M
3300021180\|Ga0210396_11161263	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300021181\|Ga0210388_11777626	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300021401\|Ga0210393_10818794	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300021404\|Ga0210389_10078593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2533	Open in IMG/M
3300021404\|Ga0210389_10801466	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300021407\|Ga0210383_10712291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	862	Open in IMG/M
3300021420\|Ga0210394_11081565	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300021475\|Ga0210392_10023215	All Organisms → cellular organisms → Bacteria	3547	Open in IMG/M
3300021475\|Ga0210392_10159903	All Organisms → cellular organisms → Bacteria → Acidobacteria	1546	Open in IMG/M
3300021479\|Ga0210410_10899009	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300021479\|Ga0210410_11705013	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300022533\|Ga0242662_10161065	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300022726\|Ga0242654_10222396	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300024186\|Ga0247688_1071848	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300025903\|Ga0207680_10674486	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300025906\|Ga0207699_10152672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1530	Open in IMG/M
3300025906\|Ga0207699_10807381	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300025915\|Ga0207693_11045729	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300025916\|Ga0207663_10181797	All Organisms → cellular organisms → Bacteria → Acidobacteria	1502	Open in IMG/M
3300025916\|Ga0207663_10739095	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300025939\|Ga0207665_10202724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1446	Open in IMG/M
3300026374\|Ga0257146_1033423	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300026999\|Ga0207949_1024646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300027047\|Ga0208730_1009676	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300027109\|Ga0208603_1037534	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300027371\|Ga0209418_1002438	All Organisms → cellular organisms → Bacteria → Acidobacteria	2316	Open in IMG/M
3300027527\|Ga0209684_1014432	Not Available	1239	Open in IMG/M
3300027548\|Ga0209523_1048099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300027576\|Ga0209003_1104649	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300027867\|Ga0209167_10325217	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300028023\|Ga0265357_1015333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300028146\|Ga0247682_1023264	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300030855\|Ga0075374_11069009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300031057\|Ga0170834_101957973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300031057\|Ga0170834_103038907	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300031057\|Ga0170834_103041904	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300031057\|Ga0170834_106710147	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300031057\|Ga0170834_111822883	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300031122\|Ga0170822_16513206	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300031231\|Ga0170824_100531844	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300031231\|Ga0170824_108876030	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264	Open in IMG/M
3300031231\|Ga0170824_110375539	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300031231\|Ga0170824_114472203	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300031231\|Ga0170824_125233237	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300031446\|Ga0170820_10627965	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	791	Open in IMG/M
3300031474\|Ga0170818_102638665	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300031474\|Ga0170818_108620367	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300031474\|Ga0170818_110427170	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300031545\|Ga0318541_10623294	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300031546\|Ga0318538_10308848	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300031590\|Ga0307483_1023036	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300031682\|Ga0318560_10566039	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300031708\|Ga0310686_111219756	All Organisms → cellular organisms → Bacteria → Acidobacteria	2052	Open in IMG/M
3300031718\|Ga0307474_11443115	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300031720\|Ga0307469_10018897	All Organisms → cellular organisms → Bacteria	3683	Open in IMG/M
3300031720\|Ga0307469_11174670	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300031754\|Ga0307475_10002051	All Organisms → cellular organisms → Bacteria	12084	Open in IMG/M
3300031754\|Ga0307475_11090858	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300031771\|Ga0318546_10588102	All Organisms → cellular organisms → Bacteria → Acidobacteria	783	Open in IMG/M
3300031941\|Ga0310912_10155434	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300031945\|Ga0310913_11315824	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300032035\|Ga0310911_10898738	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300032059\|Ga0318533_10203969	All Organisms → cellular organisms → Bacteria → Proteobacteria	1417	Open in IMG/M
3300032174\|Ga0307470_10091365	All Organisms → cellular organisms → Bacteria → Acidobacteria	1714	Open in IMG/M
3300032174\|Ga0307470_10355092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300032180\|Ga0307471_100024659	All Organisms → cellular organisms → Bacteria	4500	Open in IMG/M
3300032180\|Ga0307471_101156496	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300032205\|Ga0307472_100068625	All Organisms → cellular organisms → Bacteria → Acidobacteria	2301	Open in IMG/M
3300032205\|Ga0307472_100169297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1622	Open in IMG/M
3300032205\|Ga0307472_100553994	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300032205\|Ga0307472_101819631	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300033158\|Ga0335077_10544440	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300033290\|Ga0318519_10401030	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.36%
Host-Associated	Host-Associated	11.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.88%
Plants	Host-Associated → Plants	11.64%
Aquatic	Environmental → Aquatic	5.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.22%
Freshwater	Environmental → Aquatic → Freshwater	4.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.74%
Sediment	Environmental → Aquatic → Sediment	1.37%
Roots	Host-Associated → Plants → Roots	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.49%
Loam	Environmental → Terrestrial → Soil → Loam	13.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.37%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.37%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	10.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.05%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.37%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.37%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.37%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCE_2820540	2040502001	Soil	MKKSLTLFAALFLSTGVTSAGPQAQPGTILSHTSVTCGSKKSKKTDIDVLCQQYVLRA
FD2_01617340	2189573001	Grass Soil	MKKSLTLLGTLFLSATVAAAGPKPQSGKILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSDQTLFSI
FG2_00463980	2189573004	Grass Soil	MKRFLTLFAALFLSAAVASGGPKPQPGNILSHTSVACGTKKSKKQDINLLCQEYVVRSGTTDYTIRQPKPSDETIIPLNTAIQFTLDKNK
INPhiseqgaiiFebDRAFT_1006499752	3300000364	Soil	MKKSLALLATVLLSTAIASAGPKPQPGTILSQTSVACGAKKSKKQDIHLLCQQYVVRSGTTDYT
INPhiseqgaiiFebDRAFT_1051777013	3300000364	Soil	MKKSLVLLALILLSATVASPGPKPQPGTILSHTSVACGAKKSKKQDIDLLCQQYVLRSGTTDYTIRQPKPSDQAFIPLNTAVQFTLDKTKMKFKV
JGI1027J11758_121516721	3300000789	Soil	MRATVSLIGVDMKKSLALLATVLLSTAIASAGPKPQPGTILSQTSVACGAKKSKKQDIHLLCQQYVVRSGTTDYTI
JGI1027J11758_123239062	3300000789	Soil	MKKSLVLLALILLSATVASPGPKPQPGTILSHTSVACGAKKSKKQDIDLLCQQYVLRSGTTDYTI
JGI1027J12803_1000986201	3300000955	Soil	MKKFLTLFATLFLSAAIASAGPKPQPGTILSHTSVPCGTKKSKKQDIDLLCQQYVVRAGSTDYTIRQPKPDEQDLIPLNTAIQFTLDKNKMKFK
JGI1027J12803_1031419763	3300000955	Soil	MKRLLAFFAALALAVGSTSAGPKPQAGVILSHTSVACGTKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPDEQ
JGI1027J12803_1032299411	3300000955	Soil	MKKSLVLLALILLSATVASPGPKPQPGTILSHTSVACGAKKSKKQDIDLLCQQYVLRSGT
JGIcombinedJ43975_100780111	3300002899	Soil	MRKLLTLFAVLFLDATLASGGPKPQPGNILSHTSVACGTKKSKKQELDLLCQQYVVR
JGI25390J43892_101219491	3300002911	Grasslands Soil	MKKSLTFFAALLLSTAAVFAGPKPQPGTIVSHTSVQCGTKKSKKQDIDLLCQQYVVRSGSTDYTIRQPKPSDQTLIP
Ga0062388_1026174311	3300004635	Bog Forest Soil	MNRSLTLFAAVVLSATVTCAGPKPQPGTILSQTSVDCAEKKSKKENVNLLCQQYVVRSGSTDY
Ga0070669_1007153751	3300005353	Switchgrass Rhizosphere	MKKPPIFLAVLLLCTTVVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSEQTLIPLNTLIQFTLDKNKMKFKA
Ga0070674_1016184902	3300005356	Miscanthus Rhizosphere	MKRFLTLLVALFLSAAIASSGPKPQPGNILSHTSVACGTKKSKKQELDLLCQQYVVRSGSTDYTIRQPK
Ga0070667_1014255851	3300005367	Switchgrass Rhizosphere	MKKPPIFLAVLLLCTTVVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSDQTLIPLNTLIQFTLDKNKM
Ga0070710_112849871	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSLTLLGTLFLSATVAAAGPKPQSGKILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTI
Ga0068867_1008780352	3300005459	Miscanthus Rhizosphere	MKKPPIFLAVLLLCTTVVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSDQTLIPLNT
Ga0070732_108131522	3300005542	Surface Soil	MKKSLTLFAALFLSTAVTSAGPQAQPGTILSQTSVACGAKKSKKTDIDVLCQQYVLRAGRTDYTIRQPKPSDQT
Ga0070761_102159651	3300005591	Soil	MRKSLTLLGALFLSAIVAAGPKPQSGNILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSDQSIIPINTAIEFKVDKNKMKFK
Ga0070717_108947401	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKQSLTLLAALLISTAVVFAGSEPQLGTIVSQTSVACGAKKSKNQDIDLLCQQYVVRSGATDY
Ga0075028_1009620972	3300006050	Watersheds	MKKSLTLFATLFLNATVIFAGPPPQSGTILSQTSVTCGAKKSKKKDIDILCHQYLLRSGATDYSI
Ga0075014_1009525251	3300006174	Watersheds	MKKILVLCAILAAAATVSFAAPKQSGTVLSQTSVACGEKKSKKQSMNLMCQQYVVRSG
Ga0070765_1010225151	3300006176	Soil	MKKSLSFFAALILSAAVVFAGPKPQPGTVVSHTSVACGAKKSKKQDIDLLCQQYVVRSGTIDYTIRQPKPSDKTL
Ga0070765_1013667761	3300006176	Soil	MKNFLSLLAALFLSAAVTSAGPQPQPGTILSQTSVACGAKKSKKKDIDVLCQQYVLRSG
Ga0097621_1018721931	3300006237	Miscanthus Rhizosphere	MKKPPIFLAVLLLCTTLVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSEQAIIPLNTAIEFKLDNNKMKFKV
Ga0079222_109681772	3300006755	Agricultural Soil	MKKSLTFFAGLLISTAVVFAGSEPQHGTIVSQTSVACGAKKSKTQDIDLLCLQYVVRSGTTDYTIRQPKPSDQTLIPL
Ga0079221_110398141	3300006804	Agricultural Soil	MKKSLTFFAGLLISTAVVFAGSEPQHGTIVSQTSVACGAKKSKNQDIDLLCQQYVVRSGTTDYTIRQPKPSDQSLIPLNTSIQ
Ga0075433_116035931	3300006852	Populus Rhizosphere	MRKFLTLFAVLFLSTTLASGGPKPQPGNILSHTSVACGTKKSKKQELDLLCQQYVVRSGTTDYTIRQPKPSEQTIIPLNTAIQFT
Ga0075425_1002298981	3300006854	Populus Rhizosphere	MKKSLALLATVLLSTATASAGPKPQPGTILSQTSVACGAKKSKKQDIHLLCQQYVVRSGTTDYTI
Ga0068865_1009488031	3300006881	Miscanthus Rhizosphere	MKKPPIFLAVLLLCTTVVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSDQTLIPLNTSIQ
Ga0075424_1009419362	3300006904	Populus Rhizosphere	MRKPLTLFAALFLSAAVASAGPRPQAGAILSQTSVACGAQKSKKKDIDLMCQQYVLRSGTTDY
Ga0105242_106371852	3300009176	Miscanthus Rhizosphere	MRKFLTLFAVLFLDATLASGGPKPQPGNILSHTSVSCGSKKSKKQELDLLCQQYVVR
Ga0126372_112621671	3300010360	Tropical Forest Soil	MKKFLTLFTTLSLTVHFTFAGPKPQSGTVVSHTSIACGSKKSKKKDIDLLCHQYLVRSGATDYTIRQQK
Ga0126377_122232521	3300010362	Tropical Forest Soil	MKKFRWAFLSLLLLAESPLAVAGPKPQRGTILSQTSVPCGTKKSKKQDIELLCQQYVV
Ga0105239_105949371	3300010375	Corn Rhizosphere	MKKPPIFLAVLLLCTTVVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSDQTLIPLNTLIQFTLDKNKMKFKA
Ga0105239_120632041	3300010375	Corn Rhizosphere	MRKFLTLFAVLFLSTTLASGGPKPQPGNILSHTSVACGTKKSKKQELDLLCQQYVVRSGTTDYTIRQPKPSEQTIIPLNTAIQFTLDKNKM
Ga0126383_127455991	3300010398	Tropical Forest Soil	VKKSLTVFAILYLAAAVAFTAPKPQPGTILSHTSVACGTKKSKKQDIHLLCQQYVVRSGSTDYTVRQPKPAEQDLIRLNTAIEFKLDKNKMKFKVN
Ga0134127_121778251	3300010399	Terrestrial Soil	MKKPPIFLAVLLLCTTLVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSDQTLIPLNTSIQFTLDKNKMKFKAD
Ga0124844_10344732	3300010868	Tropical Forest Soil	MKKFLTVFFVLFLAAAIASAGPKPQPGTILAHTSVPCGTKKSKKQDFDLLCQQYVVRAATTD
Ga0151489_17440931	3300011106	Soil	MKKYLTLLAALFLCVTVAAAGPKPQSGNILSHTSVACGTKKSKKQDIDLLCQQYVVRSGTTDYTIRQP
Ga0150983_152545081	3300011120	Forest Soil	MKKSLTFFAAVFLSAVVTYAGSQPQPGTILSQTSVACGAKKSKKNDIDVLCQQYVLRSGTTDYTIRQPKPSDQ
Ga0137363_114094501	3300012202	Vadose Zone Soil	MKKSLTLFAALLVSATVASAGPNPHPGTILSQTSVACGAKKSKKNDIDVLCQQYVLRSGTTDYTIRQPKPSDQTLIPINTAIQFTLDKN
Ga0137413_109427682	3300012924	Vadose Zone Soil	MLRGVPVKKSLSLVATLLLTTMAVSAGPKPQPGTVLSQNSVPCGAKKSKKQDIDLLCQQYVILRLYGLHGSPTEA*
Ga0164301_117045391	3300012960	Soil	MKKPPIFLAVLLLCTTVVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSDQTLIPLNTAIQFTLDKN
Ga0164302_103154772	3300012961	Soil	MKKSLTFFAALLLSSAAVSAGPKPQPGTILSQTSVPCGAKKSKKQDIDLLCQEYVVRSATTDYTVRQPKPADQTLIPLNTAVQFTLDKNKIKFKVD*
Ga0126369_115514292	3300012971	Tropical Forest Soil	MKKLLTVFAAQFLAAQVASAGPKPQPGTIMSQTSVDCGTKKSKKQDINLTCQQYVVRSGTTDYTIRQPKPDEQHLIPLNTAIQFVLDKNKM
Ga0164304_117150181	3300012986	Soil	MKKPPIFLAVLLLCTTVVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSD
Ga0157372_105435761	3300013307	Corn Rhizosphere	MKKPPIFLAVLLLCTTVVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSDQTLIPLNTSIQFTLDKNKM
Ga0134081_101650832	3300014150	Grasslands Soil	MKKSLTFFAALLLSTAAVFAGPKPQPGTIVSHTSVQCGTKKSKKQDIDLLCQQYVVRSGSTDYT
Ga0132257_1014363372	3300015373	Arabidopsis Rhizosphere	MKKFPTVFFVLFLAAAIASAGPKPQPGTILSNTSVPCGTKKSKKQDIDLLCQQYVVRAATTDYTIRQPKPAEQHLIPLNTAIQF
Ga0132255_1037201511	3300015374	Arabidopsis Rhizosphere	MKKFPTVFFVLFLAAAIASAGPKPQPGTILSNTSVPCGTKKSKKQDIDLLCQQYVVRAATTDYTIRQPK
Ga0182035_107941752	3300016341	Soil	MKKFLAVFAVLLLAAAIATAGPKPQSGTILSQTSVACGTKKSKKQDIDLLCHQYVVRSGTTDYTIRQPKPDEQHI
Ga0182035_118596302	3300016341	Soil	MKRFLALSAALLLAVGSTSAGPKEQAGVVVSQTSISCGTKKSKKQDIDLLCHQYVVRSGTTDYTVRQPKPDEQHIIPLNTPVQ
Ga0182034_119222171	3300016371	Soil	MTSPIKIRNDGVQMKKCLAIFVALLLAAAVADSGPKPQTGTILSHTSVACGTKKSKKQDIDLLCQQYVVRAGHTDYTIRQPKPDEQHLIPLNTSIQFTLDKNMMR
Ga0182039_101771871	3300016422	Soil	MKKFLAVFAVLLLAAAIATAGPKPQSGTILSQTSVACGTKKSKKQDIDLLCHQYVV
Ga0187806_11435221	3300017928	Freshwater Sediment	MKQSLTLFAALFLCLTVAAGPKPQSGNILSQTSVACATKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSE
Ga0187814_102943502	3300017932	Freshwater Sediment	MKKSLTLIAALFLSASVASAGPKPQSGNILSHTSVACGTKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKTSEETIIPLNTAIEFKLDKNKM
Ga0187819_106348541	3300017943	Freshwater Sediment	VKNLLPLLVALFLSAAVAAAGPKPQSGNILSHTSVACGAKKSKKQDIDLLCQQYVVRSGTTDYTIR
Ga0187817_105376202	3300017955	Freshwater Sediment	MKKSLVLFAAVLFSATVASPGPKPQPGTILSHTSVACGAKKSKKQDIDLLCQQYVLRSGTTDYTIRQPKPSDQAFIPLNTAVQFTL
Ga0187816_100179311	3300017995	Freshwater Sediment	VKNLLPLLVALFLSAAVAAAGPKPQSGNILSHTSVACGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSEQAI
Ga0210407_110771021	3300020579	Soil	MKKSLTLLAALFLCVTVAAAGPKPQSGNILSHTSVACGTKKSKKQDIDLLCQQYVVRSGTTDYTVRQPKPSEQAIIPLNTKIEFKLDNNKMKFKV
Ga0210403_100955904	3300020580	Soil	MKRSLTLLAALFLSATVAAAGPKPQSGNVLSHTSVACGTKKSKKQDIDLLCQQYVVRSGTIDYTIRQP
Ga0210403_109519273	3300020580	Soil	MKKSLGLFAALLLSASFAPAGPQPQAGTIISQNSIACGAKKSKKKDIDLLCQQYVVRS
Ga0210403_111172401	3300020580	Soil	MKKFLAAFVVLLLGAANATAGPKPQSGTILSQTSVACGTKKSKKQDIDLLCHQYVVRSGTTDYAIRQPKPDEQHIIPLNTPIQFTLDKNMM
Ga0210403_114942231	3300020580	Soil	VKKSLGLFAALLLGASISPAGPQPQAGTIISQNSVACGAKKSKKEDIDILCQQYVVRSGSTDYTVRQPKPSNQTLIPINTPVE
Ga0210395_107791812	3300020582	Soil	MRATVSLLGVDMKKSIALFAAVLLSATVASPGPKPQPGTILSHTSVACGAKKSKKQDIDLLCQ
Ga0210401_101725115	3300020583	Soil	MKKSFLLFAALLLSASAASAGPQQQAGTIISQTSVACGAKKSKKQDIDLLCHEYVVRSG
Ga0210406_107213431	3300021168	Soil	MKKSFLLFAALLLSASAASAGPQQQAGTIISQTSVACGAKKSKKQDIDLLCHEYVVRSGATDYSVRQPKPSEQNIIPINTDVQFTLDKNKMKFK
Ga0210406_109563671	3300021168	Soil	MKRSLTLLAALFLSATVAAAGTKPKSGNILSHTSVECGTKKSKKQDIDLLCQQYVVRSGTIDYTIRQPKPSEQTIIPLNTAIEFKIDKNKMKFK
Ga0210405_1000666111	3300021171	Soil	LKKSQTLFITLFLSAAVASAGPKPQSGNILSHTSVTCGAKKSTKQDIHLLCHQYVV
Ga0210408_108913911	3300021178	Soil	KKSLTLLAALFLSATVAAAGPKPQSGNILSHTSVTCGAKKSTKQDIHLLCHQYVVRFGNTDYTIRQPKPSEQAIIPIHSNRVQARQE
Ga0210396_101366872	3300021180	Soil	VKKALLFFAALLLSGSVASAGPKPQAGTIISQNSVGCGAKKSKKQDIDILCQQYVVRAG
Ga0210396_111612632	3300021180	Soil	MKKSFLLFAALLLSASAASAGPQQQAGTIISQTSVACGAKKSKKQDIDLLCHEYVVRSGATDYSVRQPKPSEQ
Ga0210388_117776262	3300021181	Soil	MNKSLTVLVSLFLGATLAFAGPSPRPGTVLSQTSVACGAKKSKKQDIDLLCQQYVIRSGTTEYTIRQP
Ga0210393_108187941	3300021401	Soil	MKKSLTLLGTLFLSATVAAAGPKPQSGKILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSDQTLFSINTAIEFKLDK
Ga0210389_100785933	3300021404	Soil	MKKSLTLLAALFLSATAAAAGPKPQSGNILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSEQAIIPINTAIEFKLDKHKMK
Ga0210389_108014662	3300021404	Soil	MKKSLALLATVLLSTAIASAGPKPQPGTILSQTSVACGAKKSKKQDIHLLCQQYVVRSGTTDYTIRQPKPSDQALIPLNTAV
Ga0210383_107122911	3300021407	Soil	MKRSLTLLAALFLSATVAAAGTKPKSGNILSHTSVECGTKKSKKQDIDLLCQQYVVRSGTIDYTIRQPKPSEQTIIPLNTAIEFKIDKNKTK
Ga0210394_110815651	3300021420	Soil	MKKSLALLATVLLSTAIASAGPKPQPGTILSQTSVACGAKKSKKQDIHLLCQQYVVRSGTTDYTIRQPKPS
Ga0210392_100232156	3300021475	Soil	MKKSLTLFAALFLTTAVTPAGPQAQPGTILSHTSVTCGSKKSKKADIDVLCQ
Ga0210392_101599034	3300021475	Soil	MKRSLTLLAALFLSATVAAAGTKPKSGNILSHTSVECGTKKSKKQDIDLLCQQYVVRSGTIDYTIRQPKPSEQTIIPLNTAI
Ga0210410_108990091	3300021479	Soil	MKKSLTLLAALFLSVTAAASGPKPQSGNVLSHTSVACGTKKSKKQDIDLLCQQYVVHSGTTDYTI
Ga0210410_117050131	3300021479	Soil	MKRSLTLLAALFLSATVAAAGTKPKSGNILSHTSVECGTKKSKKQDIDLLCQQYVVRSGTIDYTIRQPKPSEQTIIPLNTAIEFKIDKNKMKFKVD
Ga0242662_101610651	3300022533	Soil	MKKYLTLLAALFLSATVAAAGPKPRSGNILSHTSVECGTKKSKKQDIDLLCQQYVVRSGTIDYTIRQPKPSEQAIIPLNTAIEFKLDKNKMKFKVD
Ga0242654_102223961	3300022726	Soil	MKRSAISLTAALLSTAVVFAGSKPQQGTIVSQTSVACGAKKSKKQEIDLLCQQYVVRSGTTEYTIRQPKPSDQTLIPLNTSIQFTLDKNKMKF
Ga0247688_10718481	3300024186	Soil	MKKSLTLLAALFLCVTVAAAGPKPQSGNILSHTSVGCGTKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSEQAIIPLNTAIEFKLDNNKMKFK
Ga0207680_106744861	3300025903	Switchgrass Rhizosphere	MKKPPIFLAVLLLCTTLVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGSTDYTIRQPKPSDQTVIPLNTAIQFTLDKNKMK
Ga0207699_101526722	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKKFLAVFATLILAAVLASAVPKPQSGTILSQTSVACGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSDQTLIPLNTLIQFTLDKNK
Ga0207699_108073811	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKKFLTVFFVLFLAAAIASAGPKPQPGTILSHTSVPCGTKKSKKQDIDLLCQQYVVRAATTDYTVRQPKPAEQDLIPLNTAIQFTLNKNKMKFK
Ga0207693_110457291	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKKPPIFLAVLLLCTTVVFGGSKPQQGTIVSQTSVTCGAKKSKKQDLDVLCQQYVVRSGTTDYTIRQPKPSDQTLIPLNTSIQF
Ga0207663_101817971	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKKFLAVFATLILAAVLASAVPKPQSGTILSQTSVACGTKKSKKQDIELLCHQYVVRSGITDYTIRQQKPEEQHIIP
Ga0207663_107390951	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKKSLTLLAALFLSATVAAAGPKPQSGNILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQP
Ga0207665_102027241	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKKFLTVFLVLFLTAAIASAGPKPQPGKILSHTSVPCGTKKSKKQDIDLLCQQYVVRAATTDYTIRQ
Ga0257146_10334232	3300026374	Soil	MKKFLTLFATLFLSAAVAYAGPKPQPGNILSHTSVACGTKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSEKTLIPLNTAIQFTLDKNKMKF
Ga0207949_10246461	3300026999	Forest Soil	MKKSLTFFAAVFLSAVVTYAGSQPQPGTILSQTSVACGAKKSKKNDIDVLCQQYVLRSGTTDYTIRQPKPSDQTLIPINTAI
Ga0208730_10096761	3300027047	Forest Soil	ASISPAGPQPQAGTIISQNSVACGAKKSKKEDIDILCQQYVVRSGATDFTIRQPKPSNETLIPINTPVEFSLDKNKMKFS
Ga0208603_10375343	3300027109	Forest Soil	VKKSLGLFAALLLGASISPAGPQPQAGTIISQNSVACGAKKSKKKDIDILCQQYVVRSGATDFTIRQPKPSNETLIPINTPVEFSLDKNKMKF
Ga0209418_10024381	3300027371	Forest Soil	MKKFLAVFAVLLLAAAIATAGPKPQSGTILSQTSVACGTKKSKKQDIDLLCHQYVVRS
Ga0209684_10144321	3300027527	Tropical Forest Soil	MKKFLAVFATLILAIVAASASPKPQSGTILSQTSVACGTKKSKKQDIDLLCHQY
Ga0209523_10480992	3300027548	Forest Soil	MKKFLAVFAVLLLAAAIATAGPKPQSGTILSQTSVACGTKKSKKQDIDLLCHQYVVRSGTTDYTIRQPKPDE
Ga0209003_11046491	3300027576	Forest Soil	MKKLLVVFAVLLLAAAIATAGPKPQSGTILSQTSVACGTKKSKKQDIDLLCHQYVVRAGTTDYTIRQPKPDEQHIIPLNTPIQF
Ga0209167_103252171	3300027867	Surface Soil	MNKSLTVLVALFLGTTVAFAGPNARSGNVLSQTSVACGAKKSKKQDIDLLCQQYVVRSGATDYTIRQPKPSD
Ga0265357_10153331	3300028023	Rhizosphere	MKKSLTLLAALFLYVTIAAPDSKPQSGNILSHTSVACGTKKSKKQDVDLLCQQYVVRSGTTDYTIRQPK
Ga0247682_10232642	3300028146	Soil	MKRSLPLLATLFLSATVAAAGPKPQSGNVLSHTSVECGTKKSKKQNIDLLCQQYVVRSGTTDYTIRQPKPSEQAIIPLNTAIEFKLDNN
Ga0075374_110690091	3300030855	Soil	MKVSLTLLAALFLCVTVAAGPKPQSGNILSHTSVACGTKKSKKQDIDLLCQQYVVRSGATDYTIRQPKPSEQA
Ga0170834_1019579732	3300031057	Forest Soil	MKVSLTLLAALFLSATFATAGPKLQSGNVLSHTSVACGTKKSKKQDIDLLCQQYVIRSSTTDYTIRQPKPSEQTIIPLNTAIE
Ga0170834_1030389072	3300031057	Forest Soil	MKKFLTLLAALFLCVTVAAAGPKPQSGNILSHTSVACGTKKSKKQDIDLLCQQYVVR
Ga0170834_1030419042	3300031057	Forest Soil	MKKSLTFLAALFLCVTVAAAGPKAQSGNILSHTSVACGTKKSKKQDIDLLCQQYVVR
Ga0170834_1067101472	3300031057	Forest Soil	MKKSLTLLGALFLSAAVAAGPKPQSGNILSHTSVTCGAKKSKKQDVDLLCQLYVVRSGTTDYTIRQPKPSDKSIIPIN
Ga0170834_1118228831	3300031057	Forest Soil	MKKSLTLLGTLFLSATVAAAGPKPQSGKILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQ
Ga0170822_165132061	3300031122	Forest Soil	LKKSQTLFITLFLSAAVASAGPKPQSGNILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYIIRQPKPSEQAIIPINTAIEFKLD
Ga0170824_1005318442	3300031231	Forest Soil	MKKSLTLLAALFVCVTVAAAGPEPQSGNILSHTSVACGTKKSKKQDIDLLCQQYIVRSGTTDYTIRQPKPSEQAIIPLN
Ga0170824_1088760303	3300031231	Forest Soil	MKKSLTLLGALFLSAAVAAGPKPQSGNILSHTSVTCGAKKSKKQDVDLLCQLYVVRSGTTDYTIRQPKPSDKSIIPINTAIDFKLDKN
Ga0170824_1103755392	3300031231	Forest Soil	MKKSLTLFAALLVSATVVSAGPKPQPGTILSQTSVACGAKKSKKQDIDLMCQQYVVRSGATDYTIRQPKPSDQNLI
Ga0170824_1144722031	3300031231	Forest Soil	MKKSLTFLAALFLCVTVAAAGPKAQSGNILSHTSVACGTKKSKKQDIDLLCQQYVVRSGTTDYT
Ga0170824_1252332371	3300031231	Forest Soil	MKKSLTLLGALFLSATVAAAGPKPQSGNIFSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKP
Ga0170820_106279651	3300031446	Forest Soil	MRKSLTFVAVLLMSTVAAGGPKPQPGSIVSQTSVACGAKKSKKQDIDLLCQQYVVRSGTTEYTIRQPTPSDQTLI
Ga0170818_1026386651	3300031474	Forest Soil	MKKSLTLLGALFLSAAVAAGPKPQSGNILSHTSVTCGAKKSKKQDVDLLCQLYVVRSGTTDYTI
Ga0170818_1086203671	3300031474	Forest Soil	MKRSLTLLTTLFLSATVAAAGPKPQSGNILSHTSVACGTKKSKKQDIDLLCQQYVVRSGATDYTIRQPK
Ga0170818_1104271701	3300031474	Forest Soil	MKKSLTLLAALFLSATVAAAGPKPQSGNILSHTSVTCGAKKSEKQDIDLLCQQYVVRSGTTDYTIRQPKPSEQAIIPINTAIEFK
Ga0318541_106232941	3300031545	Soil	MKKLLTVFAAQFLAVQVASAGPKPQPGTIMSQTSVECGTKKSKKQDIDLMCQQYVVRSGTTDYTIRQPKPDEQHLIPLNTAIQFVLDKNKMK
Ga0318538_103088482	3300031546	Soil	MKKLLTVFAAQFLAVQVASAGPKPQPGTIMSQTSVECGTKKSKKQDIDLMCQQYVVRSG
Ga0307483_10230361	3300031590	Hardwood Forest Soil	MKKFLAVFAVLLLAAAIVTAGPKPQSGTILSQTSVACGTKKSKKQDIDLLCHQYVVRSGTTDYAIRQPKPDEQHIIPLNTPIQF
Ga0318560_105660391	3300031682	Soil	MRKSLTVFAALLLGASVAAASPKPQAGTILSQTSVACGAKKSKKEEINLLCQQYVVRSGS
Ga0310686_1112197561	3300031708	Soil	MKKSLTLLGALFLSAAVAAGPKPQSGNILSHTSVTCGAKKSKKQDIDLLCQEYVVRSGTTDYTIRQPKPSDRSI
Ga0307474_114431151	3300031718	Hardwood Forest Soil	MKKSLTLFAALFLSTAVTSAGPQAQPGTILSQTSVACGAKKSKKTDIDVLCQQYVLRAGTTDYTIR
Ga0307469_100188975	3300031720	Hardwood Forest Soil	MRKSLTLFAFLFLSAAITSAGPQPQPGTILSQTSVACGAKKSKKNDIDVLCQQYV
Ga0307469_111746701	3300031720	Hardwood Forest Soil	MKKSLTLFAALFLSTAVASAGPKPQAGTLLSQTSVACGAQKSKKKDIDLMCQQYVLRSGTTDYTIRQPKPSDQTLIPI
Ga0307475_1000205113	3300031754	Hardwood Forest Soil	MKKSLTLLAALFLSATVAAAGPKPQSGNILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSEQAIIPINTAIEFKLDKHKMKFVDRFARPRLLKCCSC
Ga0307475_110908581	3300031754	Hardwood Forest Soil	MKKSLTLFAALFLSAAVASAGPKPQAGTILSQTSIACGAQKSKKKDIDLMCQQYVLRSGTTDYTIRQPKPSDQTLIPIN
Ga0318546_105881022	3300031771	Soil	MKKLLTVFAAQFLAAQVASAGPKPQPGTIMSQTSVECGTKKSKKQDIDLMCQQYVV
Ga0310912_101554342	3300031941	Soil	MNKSLAAFAALVLAVSVASAGPKPQSGTVLSQTSVACGTKKSKKQDIDLLCHQYVVRSGATDYTIRQPKP
Ga0310913_113158241	3300031945	Soil	MNKSLAAFAALVLAVSVASAGPKPQSGTVLSQTSVACGTKKSKKQDIDLLCHQYVVRSGLTDYT
Ga0310911_108987381	3300032035	Soil	MRKSLILFTTLSLAANFTFADSKPQSGIILSHTSVACGSKKSKKKDIDLLCHQYVVRSGATDYTIRQQKPAD
Ga0318533_102039693	3300032059	Soil	MKKLLTVFAAQFLAVQVASAGPKPQPGTIMSQTSVECGTKKSKKQDIDLMCQQYVV
Ga0307470_100913651	3300032174	Hardwood Forest Soil	VKKSLGLFAALLLSASISPAGPQQQAGTIISQTSVACGAKKSKKQDIDLLCHEYVVRSGATDYSVRQP
Ga0307470_103550921	3300032174	Hardwood Forest Soil	MKKVLTVFFVLFLAAAIASAGPKPQPGTILSQTSVPCGAKKSKKQDIDLLCQQYVVRAATTDYTIRQPKPAEQHLIPLNTAIQFTLD
Ga0307471_1000246597	3300032180	Hardwood Forest Soil	MKRFLAFFAALVLAVGFTSAGPKPQADVVLSHTSVACGTKKSKKQDIDLLCQRYVVRSGTTD
Ga0307471_1011564961	3300032180	Hardwood Forest Soil	MKKPLTLLAALFLSATVAAAGPKPQSGNILSHTSVACGTKKSKKQDIDLLCQQYVVRSGTTDYT
Ga0307472_1000686252	3300032205	Hardwood Forest Soil	MKKSLTLFAALLVSATVVSAGPKPQPGTILSQTSVACGAKKSKKQDIDLMCQQYVVRSGATDYTIRQ
Ga0307472_1001692972	3300032205	Hardwood Forest Soil	MKRLLAFFAALALAVGSTSAGPKPQAGVILSHTSVACGTKKSKKQDIDLLCQQYVVRSGTTD
Ga0307472_1005539942	3300032205	Hardwood Forest Soil	MRPAEKQGWVEPPATIFLQGVYMKKSLTLLGTLFLSATVAAAGPKPQSGKILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPSDQTLFAINTAIEFKLDK
Ga0307472_1018196311	3300032205	Hardwood Forest Soil	MKTSRTLFLSLFLCAALADAGPKPQPGTILSQTSVACGAKKSKKQDVDLLCQQYVVRSGTTDYTVRQPKPSDQALIPLNTAIQFTLDKN
Ga0335077_105444401	3300033158	Soil	MKKPLTLLAVLFLSATVAAAGSKPQRGNILSHTSVTCGAKKSKKQDIDLLCQQYVVRSGTTDYTIRQPKPGDQDLISINTAI
Ga0318519_104010301	3300033290	Soil	MKKLLTVFAAQFLAVQVASAGPKPQPGTIMSQTSVECGTKKSKKQDIDLMCQQYVVRSGTTDY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049825

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences