Metagenome / Metatranscriptome Family F049815

Basic Information
Family ID	F049815
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	48 residues
Representative Sequence	MPRVRRPRRQAPALELLEATLPELRRGLTESAARTVAYELFEKLGYG
Number of Associated Samples	127
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	33.33 %
% of genes near scaffold ends (potentially truncated)	2.05 %
% of genes from short scaffolds (< 2000 bps)	2.05 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Unclassified (97.945 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.753 % of family members)
Environment Ontology (ENVO)	Unclassified (31.507 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.945 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00293	NUDIX	43.84
PF13419	HAD_2	16.44
PF01906	YbjQ_1	13.70
PF00583	Acetyltransf_1	10.96
PF00282	Pyridoxal_deC	5.48
PF00702	Hydrolase	1.37
PF00535	Glycos_transf_2	0.68
PF07295	DUF1451	0.68
PF02811	PHP	0.68
PF13673	Acetyltransf_10	0.68
PF00990	GGDEF	0.68
PF00085	Thioredoxin	0.68
PF14791	DNA_pol_B_thumb	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	13.70
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	5.48

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.95 %
All Organisms	root	All Organisms	2.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.95 %
cellular organisms	root	All Organisms → cellular organisms	2.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.95 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.95 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.68 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005171\|Ga0066677_10800351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300005718\|Ga0068866_10289051	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300032829\|Ga0335070_10514460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1133	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.08%
Host-Associated	Host-Associated	21.23%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.66%
Plants	Host-Associated → Plants	21.23%
Aquatic	Environmental → Aquatic	3.42%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.16%
Freshwater	Environmental → Aquatic → Freshwater	2.05%
Sediment	Environmental → Aquatic → Sediment	1.37%
Roots	Host-Associated → Plants → Roots	0.68%
Grass	Engineered → Solid Waste → Grass	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.59%
Loam	Environmental → Terrestrial → Soil → Loam	11.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.37%
Ice	Environmental → Aquatic → Freshwater → Ice	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.68%
Composting	Engineered → Solid Waste → Grass → Composting	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.53%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.68%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.11%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.05%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.37%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.37%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.37%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.68%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.68%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011997	Permafrost microbial communities from Nunavut, Canada - A15_80cm_18M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028006	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-4-E_N	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4MG_03307070	2170459019	Switchgrass, Maize And Mischanthus Litter	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEV
ICCgaii200_09392511	2228664021	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVAVTDTSRVLAF
F24TB_111835051	3300000550	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSEPAARVVAYEVFEKLG
JGI10214J12806_120591911	3300000891	Soil	MPRVRRLRREAPTLELLAATLPELRAGLSDSGARTLAYEVFE
A2065W1_100776983	3300001537	Permafrost	MARVRRPRRQAPVLELLEATLPELRRGLTEGAARTVAYE
C688J35102_1187247882	3300002568	Soil	MPRVRRLRREAPTLELLAATLPKLRLGLSEAAAKTLAYEVF
C688J35102_1199666872	3300002568	Soil	MPRVRRPRRQAPALELLEATLPELRRGLTEPAARTVAYELFEKLGFGAVAVTGTHEVLAF
Ga0063454_1005779491	3300004081	Soil	MPRVRRLRRTAPALELLAATLPELRLGLTESAARTVAYQVFEK
Ga0063356_1063375081	3300004463	Arabidopsis Thaliana Rhizosphere	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVA
Ga0062595_1004869251	3300004479	Soil	MARPRRLRREAPVLELLAATLPELRRGLSERAARVLAYEVFEKLGFGAVAVTD
Ga0062595_1005834552	3300004479	Soil	MPRVRRPRRQAPALELLEATLPELRRGLTESAARTVAYELFEKLGYG
Ga0062591_1014028931	3300004643	Soil	MPRVRRLRREAPTLELLAATLPELRAGLSDSGARTLAYEVFEKLG
Ga0062594_1030107702	3300005093	Soil	MPRARRPRREAAVLELLTATLPELRRGLSEGAARTVAYELFEKLGFGAVA
Ga0066677_108003511	3300005171	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSAAGARTVAYQVF
Ga0066683_106986931	3300005172	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVAVTDT
Ga0066671_107870753	3300005184	Soil	VRPRRRPAPALELLDATLPELSHGLTEAAARTAAYELFEKLGF
Ga0066676_104634822	3300005186	Soil	VPRVRRLRREAPALELLAATLPELRLGLSEPAARTVAYQV
Ga0070683_1014073952	3300005329	Corn Rhizosphere	VRRRRRQTPALELLDATLPELRHGLTEGAARSIAYQLFEKLGYGAVA
Ga0068868_1006192882	3300005338	Miscanthus Rhizosphere	MPRVRRPRRQAPVLELLQATLPELRRGLTESAARTVAYELFEKLGYGAVA
Ga0070660_10000192018	3300005339	Corn Rhizosphere	MPRIRRPRRRAPVLELLDATLPELRRGLGEAAARTVAYEL
Ga0070687_1014925572	3300005343	Switchgrass Rhizosphere	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVAVTDTSRVL
Ga0070661_1001075191	3300005344	Corn Rhizosphere	MRRRRVPALELLDATLPELRHGLTEGAARSIAYELFEKLGYGAIAVTDLHEVLAFV
Ga0070661_1002523701	3300005344	Corn Rhizosphere	MPRVRRPRRQAPALELLEATLPELRRGLTESAARTVAYEL
Ga0070673_1006013444	3300005364	Switchgrass Rhizosphere	VRRRRREAPALELLDATLPELRRGLTASAARTVAYELFEK
Ga0070703_104154091	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MARARRQRREAPVLELLAATLPELRRGLDAGAARTLAYELFEKLGFGA
Ga0070709_115842371	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VRRRRVPALELLDATLPELRHGLTEGAARSIAYELFEKLGFGAVAVTDLH
Ga0070711_1013835771	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRRRVPALELLDATLPELRHGLTESAARSVAYELFEKLGY
Ga0070706_1013581922	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGA
Ga0070741_110795503	3300005529	Surface Soil	VARARRPRREAPALELLARTLPELRRGLTESAARTVAYEL
Ga0070734_104828533	3300005533	Surface Soil	MPRVRRHRRSEPALELLDATLDELRHGLTPQAARTVAYELFEKLG
Ga0070684_1021724281	3300005535	Corn Rhizosphere	MPRVRRLRREAPTLELLAATLPELRAGLSDSGARTLAYEVFEKLGY
Ga0066698_103745673	3300005558	Soil	VPRVRRPRREAPVLELLAETLPELRRGLSERAARTV
Ga0066699_106515381	3300005561	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVAVTDTS
Ga0068854_1021651272	3300005578	Corn Rhizosphere	VRRRRVPALELLDATLPELRHGLTEGAARSIAYELFEKLGYGAVAVTDLHEVL
Ga0070702_1015665571	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVRRQRRRAPALELLDATLPELRRGLTESAARTVAYELFEKLG
Ga0068852_1020908222	3300005616	Corn Rhizosphere	VRRRRVPALELLDATLPELRHGLTEGAARSIAYEL
Ga0068866_102890511	3300005718	Miscanthus Rhizosphere	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGY
Ga0066652_1001060365	3300006046	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDAAARTVAYEVFEKLGFGAVAVT
Ga0066652_1011312703	3300006046	Soil	VVRARRPRREAPALELLTRTLPDLRRGLTEGAARTVAYELFEKLGFGAVAVTDRDRVLAF
Ga0066652_1020263122	3300006046	Soil	MPRVRRPRRQEPVLELLEATLPELRRGLTESAARTVAYELFEKLGYGAVSVTDTQRVL
Ga0070712_1003301051	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVRRLRREAPTLELLAATLPELRAGLSDSGARTLAYEVFEKLGYGAVAVTDTSQVLAF
Ga0075522_103911632	3300006638	Arctic Peat Soil	VPRVRRPRRQAPALELLEATLPELRRGLTESAARTVAYELFEKLGYGAVAVTDTHEV
Ga0066653_105240131	3300006791	Soil	VPRARRRPRREAPVLELLAATLPELRRGLSESAARTL
Ga0066660_102609633	3300006800	Soil	MPRVRRPRRRAAALELLDATLPELRRGLTGSAARTVAYELFEKLGYGAVAV
Ga0075424_1012473802	3300006904	Populus Rhizosphere	MPRVRRLRREAPTLELLAATLPQLRLGLSDSGARTLAYE
Ga0075424_1027794801	3300006904	Populus Rhizosphere	MPRTRRPRRRAPALELLAATLPELRRGLSESAARTVAYELFEKLGYGAVAVTD
Ga0105244_105218541	3300009036	Miscanthus Rhizosphere	VPRVRRLRREAPALELLAATLPELRLGLSEPAARTVA
Ga0111539_124921942	3300009094	Populus Rhizosphere	MPRVRRLRREAPTLELLAATLPELRAGLSDSGARTLAY
Ga0105245_123224501	3300009098	Miscanthus Rhizosphere	MRRRRRVPALDLLDATLPELRHGLTESAARSVAYQV
Ga0066709_1034447302	3300009137	Grasslands Soil	VHNPIVPRVRRLLREAPVLELLAATLPELRRGLSEGAARTLAY
Ga0105241_121749461	3300009174	Corn Rhizosphere	MPRVRRPRRQAPVLELLQATLPELRRGLTESAARTVAYEL
Ga0105237_1001003612	3300009545	Corn Rhizosphere	VRRRRVPALELLDATLPELRHGLTEGAARSIAYELFE
Ga0126313_106479141	3300009840	Serpentine Soil	VPRVRRLRREAPALELLAATLPELRLGLSEAAARAVAYEVFEKLG
Ga0126305_100636851	3300010036	Serpentine Soil	MPRHRRARRETATLELLAATLPELRRGLSESAARTVAYELFEKLGVG
Ga0126312_105172941	3300010041	Serpentine Soil	MPRYRRVRREAPTLELLAATLPELRRGLSEGAARVVAYELLEKL
Ga0126310_110900402	3300010044	Serpentine Soil	VHDPIMPRHRRARRVAPTLEVLAATLPELKRGLSESAARTVAYQLFEKL
Ga0126384_107979381	3300010046	Tropical Forest Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDAAARTVAYEVFEKLGFGAVAVTDASRMLAFVG
Ga0126306_118342731	3300010166	Serpentine Soil	MPRHRRVKRAAPALELLAATLPELRRGLSDGAARTVAYELFEKLGLGAVAVTDRRHVLAF
Ga0134086_101215271	3300010323	Grasslands Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDVAARTVAYEVFEKLGFGAVAVTDTSRVL
Ga0134064_101501211	3300010325	Grasslands Soil	LRREAPTLELLAATLPELRLGLSVAGARPVAYQVFEKLGYGAVAVTDTARVLAF
Ga0134065_100550391	3300010326	Grasslands Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDAGARTVAYEVF
Ga0134122_113010701	3300010400	Terrestrial Soil	MRRRRRVPALDLLDATLPELRHGLTESAARSVAYQVFEKLGYGAVAVTALHQVLAF
Ga0120162_10219451	3300011997	Permafrost	VPRVRRPRRQAPALELLEATLPELRRGLTESAARTVAYELF
Ga0120152_11014103	3300012011	Permafrost	VHNPIMPRVRRPRRQAPVLELLQATLPELRRGLTESAARTVAYELFEKLGYGAV
Ga0136618_105515641	3300012188	Polar Desert Sand	MARVRRLRREAPALELLAATLPELRLGLSEAAARTTAYQVFEKLGFGAVSVTDTGRVLA
Ga0137364_112136402	3300012198	Vadose Zone Soil	VRRRRPVPALELLDATLPELRRGLTSAAARTVAYQLFEKLGYGAVAVTDTH
Ga0137382_113263021	3300012200	Vadose Zone Soil	MPRVRRLRREAPTLELLVATLPELRLGLSDAGARTVAYEVFEKLGYGAVAVTDTSRVL
Ga0137365_105857582	3300012201	Vadose Zone Soil	MPRVRRLRREAPTLELLAATLPQLRLGLSDGAARTLAYE
Ga0137374_106948271	3300012204	Vadose Zone Soil	VHDPIMPRHRRVRRETPTLELLAATLPELRRGLSEGAARVVAYELFEKLGLGAVAVTDRREVLAFV
Ga0137376_100329071	3300012208	Vadose Zone Soil	MPRVRRLRREAPTLELLAATLPQLRLGLSDGAARTL
Ga0137379_110738212	3300012209	Vadose Zone Soil	MAPVRRLRREAPALELLAATLPELRLGLSESAARRVAYEVF
Ga0137379_112846632	3300012209	Vadose Zone Soil	MRRRRRVPALELLDATLPELRHGLTERAARSVAYELFEKLGY
Ga0137379_115562041	3300012209	Vadose Zone Soil	MPPTRRPRVREAPVLELLEATLPELRRGLTEAAARVLAYQLFEK
Ga0137377_110154372	3300012211	Vadose Zone Soil	MPRVRRLRREAPTLELLAATLPQLRLGLSDGAARTLAYEVFEKLGFGAVAVTDTTRVL
Ga0137369_106556292	3300012355	Vadose Zone Soil	VHDPIMPRHRRVRRETPTLELLAATLPELRRGLSEGAARVVAYELFEKLGLGAVAVTDRREVLAFVGAG
Ga0157332_10106941	3300012511	Soil	VARVRRLRREAPALELLAATLPELRLGLSEPAARVVAYE
Ga0137373_104400601	3300012532	Vadose Zone Soil	MPRVRRLRREAPTLELLAATLPELRLGLSGAGSRTIAYEVFEK
Ga0137404_109712982	3300012929	Vadose Zone Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYE
Ga0153916_131125642	3300012964	Freshwater Wetlands	MPRVRRPRRQAPALELLEATLPELRRGLTESAARTLAYELFEK
Ga0134087_100306805	3300012977	Grasslands Soil	LRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVAVTDT
Ga0164309_101232811	3300012984	Soil	MPRVRRPRRRAPALELLDATLPELRRGLTASAARTVAYELFEKLGYGAVAVADT
Ga0164309_102060813	3300012984	Soil	MPRVRRPRRQAPALELLEATLPELRRGLTESAARTL
Ga0164308_108564051	3300012985	Soil	MPRVRRLRREAPTLELLAATLPQLRLGLSDGAARTLAYEVFEKL
Ga0164304_102353981	3300012986	Soil	MPRVRRLRREAPTLELLAATLPQLRLGLSDGAARTLAYEVFEKLGYGAVAVTDTSRVLA
Ga0164304_108269621	3300012986	Soil	MPRVRRPRRRAPALELLDATLPELRRGLTASAARTVAYELFEKLGYGAVAVTDRNEVLA
Ga0164304_112129802	3300012986	Soil	LRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGY
Ga0164304_113258771	3300012986	Soil	MPRVRRPRRQAPALELLEATLPDLRRGLTESAARTVAYELFEKLGYGAVAVTDTHE
Ga0164307_100074071	3300012987	Soil	MPRVRRPRRRAPALELLDATLPELRRGLTASAARTVAYELFEKL
Ga0164307_110226732	3300012987	Soil	VHNPIMPRVRRPRRQAPVLQLLQATLPELRRGLTESAARTVAYELFEKLGYGAVAVTDTH
Ga0157369_104659191	3300013105	Corn Rhizosphere	MPRIRRPRRRAPVLELLDATLPELRRGLGEAAARTVAYELFEKLG
Ga0157369_122717662	3300013105	Corn Rhizosphere	LRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVAVTD
Ga0157374_120498511	3300013296	Miscanthus Rhizosphere	MPRVRRLRREAPTLELLAATLPALRAGLSDSGARTLA
Ga0157375_136119201	3300013308	Miscanthus Rhizosphere	MARARRQRREAPVLELLAATLPELRRGLTEGAARTVAYEL
Ga0120155_10636103	3300013768	Permafrost	VPRVRRLRREAPALELLAATLPELRLGLSEPAARTVAYEVFEKLGFGAVAVTDTTRVLAFTGAG
Ga0120155_11855641	3300013768	Permafrost	VHNPIMPRVRRPRRQAPVLELLQATLPELRRGLTESAARTVAYELFEKLGYGAVAVTDTHEV
Ga0132258_128097821	3300015371	Arabidopsis Rhizosphere	MARARRQRREAPVLELLAATLPELRRGLTEGAARTVAYE
Ga0132255_1045280742	3300015374	Arabidopsis Rhizosphere	MARARRPRREAPVLELLAATLPQLRRGLSESAARTVAYELFE
Ga0187824_102050693	3300017927	Freshwater Sediment	VRGRRRPRRESPALELLEATLPELRHGLTESAARVVAYELFEKLGYGAVAVT
Ga0184621_102301781	3300018054	Groundwater Sediment	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAY
Ga0184619_104937211	3300018061	Groundwater Sediment	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVAVTDTSGVLAFDGASA
Ga0187773_111687321	3300018064	Tropical Peatland	MPRLRRRRPPPVLELLDATLPELRRGLTEAGARTVAYELFEKLGYGAVCVTDTLTVLA
Ga0193705_10860782	3300019869	Soil	MPRVRRLRREAPTLELLAATLPKLRLGLSEAAAKTLAYEVFEKLGYGAVAVTD
Ga0197907_114455592	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VRRRRRGTPALELLDATLPELRRGLTEAAAQTVAYELFEKLGYGAVAVTD
Ga0206353_101415031	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MARVRRPRRPAPVLELLEATLPELRRGLTESAARTVAYQLFEKLGF
Ga0213877_100313511	3300021372	Bulk Soil	VPRARRPRREVPALEVLSRTLPELRRGLTEGAARTLAYELFEK
Ga0213875_104291261	3300021388	Plant Roots	MRRRRRATPALELLDATLPELSHGLTADAARTVAYEL
Ga0247794_101111241	3300024055	Soil	MPRVRRPRRQAPVLELLQATLPELRRGLTESAARTVAYELFEKLGYGAVAVADTHEVL
Ga0247666_10428963	3300024323	Soil	MPRVRRPRRQAPALELLETTLPELRRGLTESAARTVAYELFEKLGYG
Ga0207933_11833801	3300025679	Arctic Peat Soil	MPRVRRPRRQAPVLELLGATLPELRHGLTESAARTVAYELFEKLGYGAVAVTDTHEVLA
Ga0207692_107940051	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVRRPRRQAPVLELLQATLPELRRGLTESAARTVAYELFEKLGY
Ga0207663_105710313	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VRRPRRQAPALELLAVTLPELRRGLTESAARTVAYELFEKLGYGAVAVTDT
Ga0207657_113852201	3300025919	Corn Rhizosphere	VRRRRRGTPALELLDATLPELRRGLTEAAAQTVAYELFEKLGYG
Ga0207657_114596231	3300025919	Corn Rhizosphere	VRRRRRVPALELLDATLPELRHGLTESAARSVAYELFEKLGYGAVA
Ga0207649_109635272	3300025920	Corn Rhizosphere	MPRVRRPRRQAPALELLEATLPELRRGLTESAARTVAYEQLERG
Ga0207694_110949521	3300025924	Corn Rhizosphere	VRRRRVPALELLDATLPELRHGLTEGAARSIAYELFEKLGFGAVAVTDLHQV
Ga0207667_101355621	3300025949	Corn Rhizosphere	MPRVRRPRRQAPALELLEATLPELRRGLTESAARTVAYELFEKLGYGAVAVTDTHEVLE
Ga0207667_120091561	3300025949	Corn Rhizosphere	VRRRRVPALELLDATLPELRHGLTEGAARSIAYELF
Ga0209848_10972452	3300026221	Permafrost Soil	MARVRRPRRRTPVLELLEATLPELRRGLTESAARTV
Ga0209328_101946701	3300027727	Forest Soil	MPRVRRLRREAPTLELLSATLPQLRLGLSESGARILAYEVFEKLGYGAVAVTN
Ga0209060_103276281	3300027826	Surface Soil	MPRVRRHRRSEPALELLDATLDELRHGLTPQAARTVAYELF
Ga0207428_104218091	3300027907	Populus Rhizosphere	MPRVRRLRREAPTLELLAATLPELRAGLSDSGARTLA
Ga0209382_112245881	3300027909	Populus Rhizosphere	VARVRRLRREAPALELLAATLPELRLGLSEPAARVVAYEVFEKLGFGAVAVT
Ga0247717_10525182	3300028006	Soil	MASMPRVRRIRREAPVLDLLAATQRELRRGLSEQAARTVAYELFE
Ga0307311_100716141	3300028716	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLG
Ga0307301_102193641	3300028719	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLA
Ga0307317_102964952	3300028720	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVAVTDTSRVLA
Ga0307282_101366903	3300028784	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDAGARTLAYEVFEKLGYGAVAVTDTTRVLA
Ga0307290_102160861	3300028791	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDAGARTLAYEVFEKL
Ga0307292_101591432	3300028811	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDAGARTLAYEVFEKLGYG
Ga0307312_110129112	3300028828	Soil	MPRVRRLRREAPTLELLAATLPKLRLGLSEAAAKTLAYEVFEKLGYGAV
Ga0307314_100228823	3300028872	Soil	VPRVRRLRREAPALELLAATLPELRLGLSEPAARTVAYEVFEKLGYGAVAVT
Ga0307314_101062182	3300028872	Soil	VPRVRRLRREAPALELLAATLPELRLGLSEPAARTVAYEVFE
Ga0307286_101204243	3300028876	Soil	VPRVRRLRREAPALELLAATLPELRLGLSEPAARTVAYEVFEKLGYGAVAVTDTT
Ga0268241_101015983	3300030511	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSEAGARTLAYEVFEK
Ga0318567_101773554	3300031821	Soil	VTCTIPIMPRVRRPRRRAPVLELLAATLPELRRGLTESAARTVAYELFEKLGYGAVAVT
Ga0318522_100685581	3300031894	Soil	VTCTIPIMPRVRRPRRRAPVLELLAATLPELRRGLTESAARTVAYELF
Ga0308175_1009647751	3300031938	Soil	VRKRRRVPALELLDATLPELRHGLTEGAARSIAYELFEKLGY
Ga0308175_1011682691	3300031938	Soil	MPRVRRPRRQAPVLELLHATLPELRRGLTESAARTVAYEL
Ga0310910_102113831	3300031946	Soil	VTCTIPIMPRVRRPRRRAPVLELLAATLPELRRGLTESAARTVAYELFEKLGYGAVAVTD
Ga0318549_102227333	3300032041	Soil	VTCTIPIMPRVRRPRRRAPVLELLAATLPELRRGLTESAARTVAYELFEKLGY
Ga0307471_1025185482	3300032180	Hardwood Forest Soil	MPRVRRLRREAPTLELLAATLPELRAGLSDSGARTLAYEVFEKLGYGAVAVT
Ga0310896_107128181	3300032211	Soil	MPRVRRLRREAPTLELLAATLPELRAGLSDSGARTLAYEVFEKLGYGAVAVTDTSRVL
Ga0335080_120185021	3300032828	Soil	MPRVRRQRSSELALELLDATLDELRHGLTAHAAQTIAYELFEKLGFGAVAVTDTGSVL
Ga0335070_105144604	3300032829	Soil	VRRRRRPVPALELLDATLPELRRGLTESAARTVAYELFEKLGYGAVAVTDTHEVLAFV
Ga0335071_100598791	3300032897	Soil	MPRVRRPRRPAPVLELLDATLAELRHGLTTQAARTVAYELFEKLGYGAVCVTDTETVL
Ga0310811_106030371	3300033475	Soil	MPRVRRLRREAPTLELLAATLPELRLGLSDSGARTLAYEVFEKLGYGAVAVTDTSR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049815

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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