Metagenome / Metatranscriptome Family F049811

Basic Information
Family ID	F049811
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	40 residues
Representative Sequence	MTRNIDHKRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRR
Number of Associated Samples	136
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.62 %
% of genes near scaffold ends (potentially truncated)	97.95 %
% of genes from short scaffolds (< 2000 bps)	95.21 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Unclassified (74.658 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.356 % of family members)
Environment Ontology (ENVO)	Unclassified (28.767 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.521 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.58% β-sheet: 0.00% Coil/Unstructured: 59.42%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF08352	oligo_HPY	91.10
PF14437	MafB19-deam	1.37
PF00005	ABC_tran	1.37
PF12911	OppC_N	0.68
PF00196	GerE	0.68
PF00496	SBP_bac_5	0.68
PF00171	Aldedh	0.68
PF06429	Flg_bbr_C	0.68
PF00528	BPD_transp_1	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.68
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.68
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	0.68
COG1558	Flagellar basal body rod protein FlgC	Cell motility [N]	0.68
COG1749	Flagellar hook protein FlgE	Cell motility [N]	0.68
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.68
COG4786	Flagellar basal body rod protein FlgG	Cell motility [N]	0.68
COG4787	Flagellar basal body rod protein FlgF	Cell motility [N]	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
All Organisms	root	All Organisms	25.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
cellular organisms	root	All Organisms → cellular organisms	25.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.37 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.42 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.05 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.37 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.37 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples	1.37 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.68 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.68 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	2.74 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	1.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.37 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.68 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.68 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	2.74 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	1.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.37 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.68 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.68 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
Nocardia tenerifensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	2.74 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	1.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.37 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	0.68 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.68 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.66 %
Nocardia tenerifensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	2.74 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	1.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.37 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	0.68 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.68 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100803897	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300003368\|JGI26340J50214_10139725	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300004092\|Ga0062389_104535307	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005164\|Ga0066815_10067682	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005355\|Ga0070671_100584060	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005434\|Ga0070709_10765278	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005539\|Ga0068853_101594676	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005559\|Ga0066700_10790936	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005591\|Ga0070761_10969433	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300005602\|Ga0070762_10908074	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005764\|Ga0066903_102321194	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300006028\|Ga0070717_10881583	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300006175\|Ga0070712_100567436	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300006577\|Ga0074050_11854080	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300006581\|Ga0074048_12539316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	510	Open in IMG/M
3300009038\|Ga0099829_10694719	Not Available	845	Open in IMG/M
3300009520\|Ga0116214_1010642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	3272	Open in IMG/M
3300009523\|Ga0116221_1177622	Not Available	925	Open in IMG/M
3300010048\|Ga0126373_11088346	Not Available	865	Open in IMG/M
3300010320\|Ga0134109_10191924	Not Available	751	Open in IMG/M
3300010360\|Ga0126372_11673412	Not Available	677	Open in IMG/M
3300010379\|Ga0136449_103024215	Not Available	656	Open in IMG/M
3300010396\|Ga0134126_11365079	Not Available	784	Open in IMG/M
3300012198\|Ga0137364_10321716	Not Available	1151	Open in IMG/M
3300012207\|Ga0137381_11764999	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012210\|Ga0137378_10804237	Not Available	852	Open in IMG/M
3300012210\|Ga0137378_11420572	Not Available	607	Open in IMG/M
3300012355\|Ga0137369_10362457	Not Available	1055	Open in IMG/M
3300012476\|Ga0157344_1010116	Not Available	674	Open in IMG/M
3300012923\|Ga0137359_10638653	Not Available	931	Open in IMG/M
3300012988\|Ga0164306_11166282	Not Available	644	Open in IMG/M
3300014493\|Ga0182016_10155427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1532	Open in IMG/M
3300015089\|Ga0167643_1061731	Not Available	557	Open in IMG/M
3300015265\|Ga0182005_1281049	Not Available	522	Open in IMG/M
3300015373\|Ga0132257_103296008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	588	Open in IMG/M
3300016294\|Ga0182041_11305895	Not Available	664	Open in IMG/M
3300016294\|Ga0182041_12093468	Not Available	528	Open in IMG/M
3300016319\|Ga0182033_11506324	Not Available	607	Open in IMG/M
3300016371\|Ga0182034_11278400	Not Available	640	Open in IMG/M
3300016404\|Ga0182037_10629300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	913	Open in IMG/M
3300017821\|Ga0187812_1057658	Not Available	1301	Open in IMG/M
3300017932\|Ga0187814_10286816	Not Available	628	Open in IMG/M
3300017942\|Ga0187808_10380404	Not Available	643	Open in IMG/M
3300017942\|Ga0187808_10454409	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300017955\|Ga0187817_10616127	Not Available	692	Open in IMG/M
3300017972\|Ga0187781_10724642	Not Available	720	Open in IMG/M
3300017973\|Ga0187780_10468131	Not Available	898	Open in IMG/M
3300017975\|Ga0187782_11195754	Not Available	595	Open in IMG/M
3300018009\|Ga0187884_10382942	Not Available	566	Open in IMG/M
3300018062\|Ga0187784_11105605	Not Available	629	Open in IMG/M
3300021178\|Ga0210408_10751827	Not Available	765	Open in IMG/M
3300021180\|Ga0210396_11581575	Not Available	536	Open in IMG/M
3300021180\|Ga0210396_11760063	Not Available	502	Open in IMG/M
3300021181\|Ga0210388_10594253	Not Available	968	Open in IMG/M
3300021181\|Ga0210388_11591013	Not Available	543	Open in IMG/M
3300021362\|Ga0213882_10390054	Not Available	588	Open in IMG/M
3300021377\|Ga0213874_10042093	Not Available	1371	Open in IMG/M
3300021388\|Ga0213875_10080224	Not Available	1522	Open in IMG/M
3300021402\|Ga0210385_10869643	Not Available	692	Open in IMG/M
3300021407\|Ga0210383_10107586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	2350	Open in IMG/M
3300021432\|Ga0210384_10626110	Not Available	966	Open in IMG/M
3300021433\|Ga0210391_10916429	Not Available	683	Open in IMG/M
3300021474\|Ga0210390_10232942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1559	Open in IMG/M
3300021559\|Ga0210409_10154047	Not Available	2104	Open in IMG/M
3300021560\|Ga0126371_12475384	Not Available	628	Open in IMG/M
3300021560\|Ga0126371_12487938	Not Available	627	Open in IMG/M
3300022512\|Ga0242676_1052311	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300022720\|Ga0242672_1135724	Not Available	517	Open in IMG/M
3300024290\|Ga0247667_1023858	Not Available	1175	Open in IMG/M
3300024325\|Ga0247678_1019016	Not Available	1041	Open in IMG/M
3300025898\|Ga0207692_10485197	Not Available	782	Open in IMG/M
3300025915\|Ga0207693_10860123	Not Available	697	Open in IMG/M
3300025927\|Ga0207687_10260644	Not Available	1382	Open in IMG/M
3300025928\|Ga0207700_10573848	Not Available	1003	Open in IMG/M
3300026490\|Ga0257153_1022826	Not Available	1285	Open in IMG/M
3300026866\|Ga0207786_116593	Not Available	594	Open in IMG/M
3300026898\|Ga0207788_1021980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300026984\|Ga0208732_1022224	Not Available	575	Open in IMG/M
3300027031\|Ga0208986_1020062	Not Available	688	Open in IMG/M
3300027072\|Ga0208238_1017096	Not Available	627	Open in IMG/M
3300027737\|Ga0209038_10063118	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300027855\|Ga0209693_10240561	Not Available	888	Open in IMG/M
3300027874\|Ga0209465_10631801	Not Available	529	Open in IMG/M
3300027884\|Ga0209275_10602646	Not Available	630	Open in IMG/M
3300028072\|Ga0247675_1024055	Not Available	880	Open in IMG/M
3300028146\|Ga0247682_1010029	Not Available	1633	Open in IMG/M
3300028742\|Ga0302220_10144529	Not Available	909	Open in IMG/M
3300028747\|Ga0302219_10423619	Not Available	522	Open in IMG/M
3300028775\|Ga0302231_10440779	Not Available	550	Open in IMG/M
3300028819\|Ga0307296_10036580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	2592	Open in IMG/M
3300028875\|Ga0307289_10492616	Not Available	504	Open in IMG/M
3300028906\|Ga0308309_10692958	Not Available	885	Open in IMG/M
3300030007\|Ga0311338_10324012	Not Available	1689	Open in IMG/M
3300030007\|Ga0311338_10572910	Not Available	1167	Open in IMG/M
3300030057\|Ga0302176_10441238	Not Available	525	Open in IMG/M
3300030629\|Ga0210268_1357799	Not Available	508	Open in IMG/M
3300030740\|Ga0265460_11437060	Not Available	682	Open in IMG/M
3300030743\|Ga0265461_10063376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	1532	Open in IMG/M
3300030760\|Ga0265762_1165943	Not Available	535	Open in IMG/M
3300031058\|Ga0308189_10448024	Not Available	545	Open in IMG/M
3300031090\|Ga0265760_10142868	Not Available	780	Open in IMG/M
3300031231\|Ga0170824_127662786	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031561\|Ga0318528_10504353	Not Available	650	Open in IMG/M
3300031564\|Ga0318573_10703926	Not Available	543	Open in IMG/M
3300031668\|Ga0318542_10575911	Not Available	587	Open in IMG/M
3300031681\|Ga0318572_10777409	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300031682\|Ga0318560_10413916	Not Available	730	Open in IMG/M
3300031715\|Ga0307476_10522636	Not Available	880	Open in IMG/M
3300031718\|Ga0307474_10741192	Not Available	776	Open in IMG/M
3300031719\|Ga0306917_10468543	Not Available	988	Open in IMG/M
3300031747\|Ga0318502_10938785	Not Available	526	Open in IMG/M
3300031748\|Ga0318492_10225506	Not Available	964	Open in IMG/M
3300031764\|Ga0318535_10328543	Not Available	684	Open in IMG/M
3300031778\|Ga0318498_10483738	Not Available	546	Open in IMG/M
3300031779\|Ga0318566_10358397	Not Available	719	Open in IMG/M
3300031782\|Ga0318552_10228221	Not Available	944	Open in IMG/M
3300031794\|Ga0318503_10113202	Not Available	866	Open in IMG/M
3300031795\|Ga0318557_10369759	Not Available	659	Open in IMG/M
3300031797\|Ga0318550_10513864	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300031798\|Ga0318523_10580219	Not Available	552	Open in IMG/M
3300031805\|Ga0318497_10221980	Not Available	1046	Open in IMG/M
3300031832\|Ga0318499_10163123	Not Available	869	Open in IMG/M
3300031845\|Ga0318511_10441649	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031880\|Ga0318544_10106213	Not Available	1061	Open in IMG/M
3300031894\|Ga0318522_10419064	Not Available	507	Open in IMG/M
3300031910\|Ga0306923_10588608	Not Available	1250	Open in IMG/M
3300031942\|Ga0310916_11366347	Not Available	581	Open in IMG/M
3300031942\|Ga0310916_11650618	Not Available	519	Open in IMG/M
3300031947\|Ga0310909_10311597	Not Available	1320	Open in IMG/M
3300031947\|Ga0310909_10580263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	937	Open in IMG/M
3300031959\|Ga0318530_10435876	Not Available	544	Open in IMG/M
3300032025\|Ga0318507_10058898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1530	Open in IMG/M
3300032043\|Ga0318556_10557638	Not Available	598	Open in IMG/M
3300032044\|Ga0318558_10206492	Not Available	959	Open in IMG/M
3300032064\|Ga0318510_10414557	Not Available	575	Open in IMG/M
3300032068\|Ga0318553_10672746	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300032089\|Ga0318525_10558572	Not Available	585	Open in IMG/M
3300032090\|Ga0318518_10181303	Not Available	1076	Open in IMG/M
3300032091\|Ga0318577_10560960	Not Available	543	Open in IMG/M
3300032174\|Ga0307470_10704684	Not Available	770	Open in IMG/M
3300032770\|Ga0335085_12100740	Not Available	570	Open in IMG/M
3300032895\|Ga0335074_10104450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia tenerifensis	3721	Open in IMG/M
3300032895\|Ga0335074_10900653	Not Available	802	Open in IMG/M
3300032954\|Ga0335083_10157777	Not Available	2133	Open in IMG/M
3300033289\|Ga0310914_10177067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1896	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.52%
Host-Associated	Host-Associated	5.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.36%
Aquatic	Environmental → Aquatic	6.16%
Plants	Host-Associated → Plants	5.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.56%
Freshwater	Environmental → Aquatic → Freshwater	6.16%
Peat	Environmental → Terrestrial → Peat	4.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.05%
Roots	Host-Associated → Plants → Roots	1.37%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.38%
Loam	Environmental → Terrestrial → Soil → Loam	13.01%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.11%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.37%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.37%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.37%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.11%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.74%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.05%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.37%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.68%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026866	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 76 (SPAdes)	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027031	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027072	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1008038971	3300002245	Forest Soil	VTRKIDQRRLGRLRQGQGEIANHIIDEFAAGRLSRRDFI
JGI26340J50214_101397252	3300003368	Bog Forest Soil	MTRNIDHNRLGHLRQGQGEIANHLIDEFAAGRLSRRDFIRR
Ga0062389_1045353071	3300004092	Bog Forest Soil	VTRNIDHRRLARLRQGQGDIANHVIDEFAAGRLSRRDFIRRG
Ga0066815_100676821	3300005164	Soil	MTRKIDHRRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRRAT
Ga0070671_1005840602	3300005355	Switchgrass Rhizosphere	VNADHRRLDRLREGQGAVGNHIIDEFAAGRLSRRDFIRRGTVVGI
Ga0070709_107652781	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LTRNIDHKRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIRRGTV
Ga0068853_1015946761	3300005539	Corn Rhizosphere	VSDDRMTQLRAGQGEIANHVIDEFTAGRLTRRDFIRRGTV
Ga0066700_107909362	3300005559	Soil	VNTDHGRLSRLRQGQGEIANHVIDEYAAGRLSRRD
Ga0070761_109694331	3300005591	Soil	MTRNIDHRRLSRLREDQSDVANHVIDEFAAGRLTRRD
Ga0070762_109080742	3300005602	Soil	VSKKINHRELGRLRQGQGEIANHVIDEFAAGRVSRR
Ga0066903_1023211941	3300005764	Tropical Forest Soil	MTRNIDHRRLGRLREGQGEIANHIIDEFAAGRLSRRDFIR
Ga0070717_108815831	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTRNIDHNRLGHLRQGQGEIANHIIDEFAAGRLSRRDFIRRGTVVG
Ga0070712_1005674361	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VDIDHGRLSRLRQGQGEIANHVIDEYTAGRLSRRDFLRRG
Ga0074050_118540801	3300006577	Soil	MTRKIDHNRLGQLRQGQGEIANHIIDEFAAGRLSRRDFIRRGTVV
Ga0074048_125393161	3300006581	Soil	MTRKIDHRRLGQLRQGQGEIADHIIDEFAAGRLSRRDFIRRG
Ga0099829_106947192	3300009038	Vadose Zone Soil	MTRNIDNHRLGQLRQGQGEIANHIIDEFAAGRLSRRDFI
Ga0116214_10106421	3300009520	Peatlands Soil	MTRNIDHNRLGHLRQGQGEIANHIIDEFAAGRLSRRD
Ga0116221_11776221	3300009523	Peatlands Soil	MTRNIDHNRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRRGTVVG
Ga0126373_110883462	3300010048	Tropical Forest Soil	VRSNIDHRRLARLRRGQGEIANHVIDEFAAGRLSRRDFI
Ga0134109_101919241	3300010320	Grasslands Soil	VDIDHGRLSRLRQGQGEIANHVIDEYAAGRLSRRDF
Ga0126372_116734121	3300010360	Tropical Forest Soil	VDVDHGRLSRLREGQGEIANHAIDEYAAGRLSRREF
Ga0136449_1030242151	3300010379	Peatlands Soil	MTRNIDHNRLGQVRQGQGEIANHIIDEFAAGRLSR
Ga0134126_113650792	3300010396	Terrestrial Soil	MTRNIDNRRLGQLREGQGEIANHIIDEFAAGRLSR
Ga0137364_103217162	3300012198	Vadose Zone Soil	MTRKIDHRRLGQLRQDQGEIANHIIDEFAAGRLSRRDFI
Ga0137381_117649992	3300012207	Vadose Zone Soil	LEAKVNADHRRLDRLREGQGAVGNHIIDEFAAGRLSRRDFIRRGT
Ga0137378_108042371	3300012210	Vadose Zone Soil	MTRKINHNRLGQLREGQGEIANHIIDEFAAGRLSRRDFIRRGT
Ga0137378_114205721	3300012210	Vadose Zone Soil	MTRPAGRIRLGRLRRGQGEIANHVIDEFAAGRLSRRDFIR
Ga0137369_103624571	3300012355	Vadose Zone Soil	VNADHGRLDHLRKGQGDIGNHVIDEFAAGRITRRDFIR
Ga0157344_10101162	3300012476	Arabidopsis Rhizosphere	MTRKIDNKRLGQLREGQGEIANHIIDEFAAGRLSRRDFVRRGT
Ga0137359_106386531	3300012923	Vadose Zone Soil	MTRNIDHHRLGRLRQDQGEIANHIIDEFAAGRLSRRDFI
Ga0164306_111662821	3300012988	Soil	MTRKIDHKRLGQLREGQGEIANHIIDEFAAGRLSRRDFIRRGTVVGI
Ga0182016_101554271	3300014493	Bog	MTRNIDHRRLGRLRQDQGDIANHIIDEFAAGRLSRRDFIRRASVV
Ga0167643_10617312	3300015089	Glacier Forefield Soil	LTRNIDHKRLGQLREDQGEIANHIIDEFAAGRLSR
Ga0182005_12810492	3300015265	Rhizosphere	MTRKIDHKRLGQLREGQGEIANHIIDEFAAGRLSRRDFIRRGT
Ga0132257_1032960083	3300015373	Arabidopsis Rhizosphere	VDIDHGRLSRLREGQGEIANHVIDEYAAGRLSRRD
Ga0182041_113058952	3300016294	Soil	MTRNIDDRRLGQLRQGQGEIANHIIDEFAAGRLSRRDFIR
Ga0182041_120934682	3300016294	Soil	VTRKIDHRRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRR
Ga0182033_115063242	3300016319	Soil	VDIDHGRLSRLRQGQGEIANHVIDEYAAGRLSRRDFLRR
Ga0182034_112784001	3300016371	Soil	MTRNIDHRRLGRLRRGQGEIANHIIDEFAAGRLSRRDFIRRATV
Ga0182037_106293002	3300016404	Soil	VDIDHGRLSRLRQGQGEIANHVIDEYAAGRLSRRDFLR
Ga0187812_10576582	3300017821	Freshwater Sediment	VTRNIDHRQLGRLRQDQGEIANHIIDEFAAGRLSRRDFIRRGTV
Ga0187814_102868162	3300017932	Freshwater Sediment	VTSNINHRRLARLRRGQGEIANHIIDEFAAGRLSRRDFIR
Ga0187808_103804042	3300017942	Freshwater Sediment	VTRKIDHRRLGRLRQDQGEIANHIIDEFAAGRLSRRDFIRRATV
Ga0187808_104544091	3300017942	Freshwater Sediment	VNTRKVRLDQLRAGQSEIGNHVIDEFVAGRLNRRDFLRRGAL
Ga0187817_106161271	3300017955	Freshwater Sediment	VTRNIDHRRLGRLRQDQGEIANHIIDEFAAGRLSRRDFIRRAAV
Ga0187781_107246422	3300017972	Tropical Peatland	VTRNIDHRRLGRLRQDQGEIANHIIDEFAAGRLSRRDFIR
Ga0187780_104681311	3300017973	Tropical Peatland	VTRKIDHRRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRRASV
Ga0187782_111957541	3300017975	Tropical Peatland	VTRKIDHRRLGHLRQGQGDIANHIIDEFAAGRLSRRDFIRRAS
Ga0187884_103829422	3300018009	Peatland	MTRNIDHRRLGRIRQDQGDIANHIIDEFAAGRLSRRDFIRRASV
Ga0187784_111056052	3300018062	Tropical Peatland	VTSNIDHRRLARLRRGQGEIANHIIDELAAGRLSRREFIRRAS
Ga0210408_107518271	3300021178	Soil	MTRKIDHRRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIRRGTVVGI
Ga0210396_115815752	3300021180	Soil	MTRNIDLKRLGRLRRGQGEIANHIIDEFAAGRLSRRDF
Ga0210396_117600631	3300021180	Soil	VRPNIDHRRLARLRQGQGDIANHVIDEFAAGRLSRRDFV
Ga0210388_105942532	3300021181	Soil	MTRNIDLKRLGRLRRGQGEIANHIIDEFAAGRLSRRDFIRRAS
Ga0210388_115910131	3300021181	Soil	MTRKIDYRRLGRLRQDQGEIANHIIDEFAAGRLTRRDF
Ga0213882_103900542	3300021362	Exposed Rock	MTRKIDHRRLGRLRRGQGEIANHIIDEFTAGRLSRRDFIRRATV
Ga0213874_100420932	3300021377	Plant Roots	MTRNIDHRRLGRLRQGQGEIANHIIDEFAAGRLSRRD
Ga0213875_100802242	3300021388	Plant Roots	MTRKVDQARLGELRQGQGEIANHIIDELAAGRLSRRDFIRRGS
Ga0210385_108696432	3300021402	Soil	VHPDNERLDRLRAGQGEIANHIIDEFAAGRLSRRD
Ga0210383_101075863	3300021407	Soil	VNADHRRLSRLREGQGDVANHVIDEFAAGRMSRRDFI
Ga0210384_106261101	3300021432	Soil	VSPHIDHRRLSRLRRGQGEIANHVIDEFAAGRLTRR
Ga0210391_109164292	3300021433	Soil	LTRNIDHRWLGRLRQDQGEIANHIIDEFAAGRLSRRDFIRRATVV
Ga0210390_102329422	3300021474	Soil	LTRNIDHRWLGRLRQDQGEIANHIIDEFAAGRLSRRDF
Ga0210409_101540471	3300021559	Soil	MTRKIDHRRLGRLRQGQGEIANHIIDEFATGRMSRRDF
Ga0126371_124753841	3300021560	Tropical Forest Soil	VNVDHSRLDELRASQGEIANHVIDEFVAGRLSRRDL
Ga0126371_124879382	3300021560	Tropical Forest Soil	VSIDHGRLSRLREGRGEIANHVIDEHTAGRLSRRDF
Ga0242676_10523111	3300022512	Soil	VDIDHGRLSRLREGQGEIANHVIDEYAAGRLSRRDFLRR
Ga0242672_11357241	3300022720	Soil	MTRKIDHRRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIR
Ga0247667_10238582	3300024290	Soil	MTRKIDHKRLGQLREGQGEIANHIIDEFAAGRLSRRDFV
Ga0247678_10190162	3300024325	Soil	VNADHRRLDRLREGQGAVGNHIIDEFAAGRLSRRDFIRRG
Ga0207692_104851972	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LTRNIDHKRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIRR
Ga0207693_108601232	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VDIDHGRLSRLRQGQGEIANHVIDEYTAGRLSRRDFLRRGA
Ga0207687_102606442	3300025927	Miscanthus Rhizosphere	VNADHRRLDRLREGQGAVGNHIIDEFAAGRLSRRDFIRRGT
Ga0207700_105738481	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTRNIDNRRLGQLREGQGEIANHIIDEFAAGRLSRRDFIRRG
Ga0257153_10228261	3300026490	Soil	MTRKIDHRRLGQLRQDQGEIANHIIDEFAAGRLSRRDF
Ga0207786_1165932	3300026866	Tropical Forest Soil	VTKKIDHRRLGRLRQDQGELANHVIDEFAAGRLSRRDF
Ga0207788_10219801	3300026898	Tropical Forest Soil	MSGDNGRSDRLRQGQGAVANHVIDEFAAGRISRRDFLRR
Ga0208732_10222241	3300026984	Forest Soil	MTRNIDHKRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRR
Ga0208986_10200622	3300027031	Forest Soil	MTRKIDKKRLGQLREGQGEIANHIIDEFAAGRLSRRDFIRRAT
Ga0208238_10170961	3300027072	Forest Soil	VNADPRRLSRLREGQGDIANHVIDEFAAGRMSRRDFI
Ga0209038_100631181	3300027737	Bog Forest Soil	LTRNIDHRRLGRLRQDQGEIANHIIDEFAAGRLSRR
Ga0209693_102405612	3300027855	Soil	MTRNIDHNRLGHLRQGQGEIANHIIDEFAAGRLSRRDFIRRGT
Ga0209465_106318012	3300027874	Tropical Forest Soil	VDVDHGRLSRIREGQGEIANHVIDEYAAGRLSRREFL
Ga0209275_106026462	3300027884	Soil	VSKKINHRELGRLRQGQGEIANHVIDEFAAGRVSRRDFIRR
Ga0247675_10240552	3300028072	Soil	VNADNRRLDRLREGQGELGNHIIDEFAAGRLSRRDFIRRGTV
Ga0247682_10100291	3300028146	Soil	MTRKIDNKRLGQLREGQGEIANHIIDEFAAGRLSRRDF
Ga0302220_101445291	3300028742	Palsa	MTRNIDHRRLGRIRQDQGDIANHIIDEFAAGRLSR
Ga0302219_104236191	3300028747	Palsa	MTRNIDHRRLGRLRQDQGDIANHIIDEFAAGRLSRRD
Ga0302231_104407792	3300028775	Palsa	VTRNIDHRRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRRAT
Ga0307296_100365803	3300028819	Soil	MTRRIDHDRLGQLRQDQGEIANHIIDEFAAGRLSRRDF
Ga0307289_104926162	3300028875	Soil	MTRKIDNKRLGQLREGQGEIANHIIDEFAAGRLSRRDFVRRGTVV
Ga0308309_106929581	3300028906	Soil	MTRNIDHNQLGHLRQGQGEIANHIIDEFAAGRLSRRDFIRR
Ga0311338_103240122	3300030007	Palsa	VTRNIDHRRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRRATVV
Ga0311338_105729102	3300030007	Palsa	VTRNIDHRRLARLRQGQGDIANHVIDEFAAGRLSRRD
Ga0302176_104412381	3300030057	Palsa	MTRNIDHRRLGRLRQDQGDIANHIIDEFAAGRLSRRDFIRRASV
Ga0210268_13577991	3300030629	Soil	VTRKIDHRRLGQLRKDQGDLANHVMEEFAAGQLSRHDFIRRA
Ga0265460_114370602	3300030740	Soil	VTRKIDHRRLGRLRQDQGDLANHVIDEFAAGRLSRRDFI
Ga0265461_100633762	3300030743	Soil	LVTRNIDHHRLGRLRQDQGEIANHIIDEFAAGRLSRRDFVRRAT
Ga0265762_11659431	3300030760	Soil	MTRNIDDRRLGRLRQDQGEIANHIIDEFAAGRLSRRDFI
Ga0308189_104480241	3300031058	Soil	MTRKIDHKRLGQLREGQGEIANTIIDEFAAGRLSRRDFIRRGTVVGIS
Ga0265760_101428681	3300031090	Soil	MTRNIDHNRLGHLRQDQGEIANHIIDEFAAGRLSRRDFIRRGTIV
Ga0170824_1276627862	3300031231	Forest Soil	MTRKIDHRRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIRRGTVVGISV
Ga0318528_105043532	3300031561	Soil	MTRNIDHRRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRRASVV
Ga0318573_107039262	3300031564	Soil	VSIDRGRLSRLREGQGEIANHIIDEYAVGRLSRREFL
Ga0318542_105759111	3300031668	Soil	VGIDHGRLSRLRQGQGEIANHVIDEYAAGRLSRRDFLRRG
Ga0318572_107774091	3300031681	Soil	MTRNIDHKRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIRRGTVVGISV
Ga0318560_104139162	3300031682	Soil	VNADHHRLDRLREGQGDIGNHVIDEYVAGRLSRRDFIR
Ga0307476_105226361	3300031715	Hardwood Forest Soil	VNIDHGRLGRLREGQGEIANHVIDEYTAGRLSRRE
Ga0307474_107411922	3300031718	Hardwood Forest Soil	MPDNSPTDNPRLSRLRRGQGEVANHIIDEFAAGRLSRRDFIR
Ga0306917_104685431	3300031719	Soil	MTRNIDHRRLGRLRRGQGEIANHIIDEFAAGRLSRRD
Ga0318502_109387851	3300031747	Soil	VRPKIDHRRLGRLRQDQGEIANHVIDELAAGRLSRRDFI
Ga0318492_102255061	3300031748	Soil	VNIDHDRLDQIREGQGEIANHIIDEYVAGRLSRRELLRR
Ga0318535_103285431	3300031764	Soil	MTRNIDHKRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIRR
Ga0318498_104837381	3300031778	Soil	VRPKIDHRRLGRLRQDQGEIANHIIDEFAAGRLSRRDFIRRA
Ga0318566_103583972	3300031779	Soil	MTRNIDHKRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIRRGTV
Ga0318552_102282211	3300031782	Soil	VNIDHRRLSRLREDQGEIANHVIDEYAAGRLSRRDFLRKGT
Ga0318503_101132022	3300031794	Soil	MTRNIDHKRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIRRGTVVGI
Ga0318557_103697591	3300031795	Soil	VDIDHGRLSRLRQGQGEIANHVIDEYAAGRLSRRD
Ga0318550_105138642	3300031797	Soil	VNIDHDRLDQIRAGQGEIANHIIDEYAAGRLSRRDLL
Ga0318523_105802191	3300031798	Soil	VSIDRGRLTRLREGRGEIANHVIDEYTAGRLSRRH
Ga0318497_102219801	3300031805	Soil	MTRNIDHKRLGQLRQDQGEIANHIIDEFAAGRLSRRDFIRRGTVVGIS
Ga0318499_101631231	3300031832	Soil	VDIDHGRLSRLREGQGEIANHVIDEYAAGRLSRRDF
Ga0318511_104416491	3300031845	Soil	VTRNIDHRRLARLRQDQGEIANHIIDEFAAGRLSRRDFIRRAAVVG
Ga0318527_101683331	3300031859	Soil	VNADHRRLDRLREGQGDIGNHVIDEFVAGRISRRDFI
Ga0318544_101062132	3300031880	Soil	MTRNIDHRRLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRRASV
Ga0318522_104190642	3300031894	Soil	MTRNIDDRRLGQLRQGQGEIANHIIDEFAAGRLSRRDFIRR
Ga0306923_105886081	3300031910	Soil	VDIDHGRLSRLRKGQGEIANHVIDEYAAGRLSRRDFLRRGAL
Ga0310916_113663471	3300031942	Soil	MTRNIDHKRLGQLRQGQGEIANHIIDEFAAGRLSRRDFIRRGTVVGI
Ga0310916_116506182	3300031942	Soil	MTRNIDHRRLGRLRRGQGEIANHIIDEFAAGRLSRRDFIRRATVV
Ga0310909_103115971	3300031947	Soil	MTRNIDHRRLGRLRQGQGEIANHIIDEFAAGRISRRD
Ga0310909_105802631	3300031947	Soil	VSIDRGRLSRLREGQGEIANHIIDEYAVGRLSRREF
Ga0318530_104358761	3300031959	Soil	VTRNIDHRRLGRLRQDQGEIANHIIDEFAAGRLSRRDFIRR
Ga0318507_100588982	3300032025	Soil	MTRKIDHRRLGRLREDQGEIANHIIDEFAAGRLSRRDFIRRATV
Ga0318556_105576381	3300032043	Soil	VDINHGRLSRLRQGQGEIANHVIDEYAAGRLSRRD
Ga0318558_102064922	3300032044	Soil	VDIDHGRLSRLRQGQGEIANHVIDEYAAGRLSRRDFLRRGV
Ga0318510_104145572	3300032064	Soil	MTRNIDHKRLGQLRQGQGEIANHIIDEFAAGRLSR
Ga0318553_106727461	3300032068	Soil	VNVDHGRLSRLREGQGEIANHVIDEYAAGHLSRRD
Ga0318525_105585721	3300032089	Soil	VKSNIDHRRLARLRRGQGEIANHVIDEFAAGRLSRRDFIR
Ga0318518_101813031	3300032090	Soil	VNIDHDRLDQIREGQGEIANHIIDEYVAGRLSRRDLL
Ga0318577_105609601	3300032091	Soil	VTRNIDHRRLGRLRQDQGEIANHIIDEFAAGRMSRRDFI
Ga0307470_107046842	3300032174	Hardwood Forest Soil	MTRKIDHRRLGRLRQGQGEIANHIIDEFAAGRMSRRDF
Ga0335085_121007401	3300032770	Soil	MTRKIDHKRLGQLRQGQGEIANHIIDEFAAGRLSRRDFIRRGTVVGI
Ga0335074_101044501	3300032895	Soil	VSRKIDHRKLGRLRQGQGEIANHIIDEFAAGRLSRRDFIRR
Ga0335074_109006532	3300032895	Soil	LNIDHNRLDRLREDQGDIANHIIDEFAAGRLSRRD
Ga0335083_101577771	3300032954	Soil	MTKKIDQHRLGQLRQGQGEIANHIIDEFAEGRLSRRDFIRRA
Ga0310914_101770673	3300033289	Soil	VSIDRGRLSRLREGRGEIANHVIDEYAVGRLSRRDFLVRGTVA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049811

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign