NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049786

Metagenome / Metatranscriptome Family F049786

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049786
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 59 residues
Representative Sequence MIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYVIPLLYFRK
Number of Associated Samples 83
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 58.22 %
% of genes near scaffold ends (potentially truncated) 14.38 %
% of genes from short scaffolds (< 2000 bps) 65.07 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(54.110 % of family members)
Environment Ontology (ENVO) Unclassified
(45.890 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.479 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 51.72%    β-sheet: 0.00%    Coil/Unstructured: 48.28%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF12838Fer4_7 47.95
PF13545HTH_Crp_2 3.42
PF09957VapB_antitoxin 2.74
PF02985HEAT 2.05
PF00037Fer4 2.05
PF02652Lactate_perm 1.37
PF13620CarboxypepD_reg 1.37
PF04234CopC 1.37
PF03901Glyco_transf_22 1.37
PF05425CopD 1.37
PF13437HlyD_3 0.68
PF00076RRM_1 0.68
PF01850PIN 0.68
PF08450SGL 0.68
PF12796Ank_2 0.68
PF00383dCMP_cyt_deam_1 0.68
PF13183Fer4_8 0.68
PF14437MafB19-deam 0.68
PF04255DUF433 0.68
PF02604PhdYeFM_antitox 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG1276Putative copper export proteinInorganic ion transport and metabolism [P] 1.37
COG1620L-lactate permeaseEnergy production and conversion [C] 1.37
COG2372Copper-binding protein CopC (methionine-rich)Inorganic ion transport and metabolism [P] 1.37
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.68
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.68
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.68
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.68
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.68

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101560648All Organisms → cellular organisms → Bacteria2298Open in IMG/M
3300000955|JGI1027J12803_106567832All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1250Open in IMG/M
3300002914|JGI25617J43924_10002650All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus5014Open in IMG/M
3300002914|JGI25617J43924_10020875All Organisms → cellular organisms → Bacteria2266Open in IMG/M
3300004100|Ga0058904_1304371All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300005445|Ga0070708_100137576All Organisms → cellular organisms → Bacteria2264Open in IMG/M
3300005446|Ga0066686_10141259All Organisms → cellular organisms → Bacteria1586Open in IMG/M
3300006176|Ga0070765_100133854All Organisms → cellular organisms → Bacteria → Acidobacteria2191Open in IMG/M
3300006797|Ga0066659_10061315All Organisms → cellular organisms → Bacteria2421Open in IMG/M
3300007255|Ga0099791_10013913All Organisms → cellular organisms → Bacteria → Acidobacteria3405Open in IMG/M
3300007255|Ga0099791_10038376All Organisms → cellular organisms → Bacteria2121Open in IMG/M
3300007255|Ga0099791_10077816All Organisms → cellular organisms → Bacteria → Acidobacteria1510Open in IMG/M
3300007255|Ga0099791_10249958All Organisms → cellular organisms → Bacteria → Acidobacteria841Open in IMG/M
3300007255|Ga0099791_10625672All Organisms → cellular organisms → Bacteria → Acidobacteria527Open in IMG/M
3300007258|Ga0099793_10143351All Organisms → cellular organisms → Bacteria → Acidobacteria1129Open in IMG/M
3300007258|Ga0099793_10275276All Organisms → cellular organisms → Bacteria → Acidobacteria815Open in IMG/M
3300007265|Ga0099794_10087333All Organisms → cellular organisms → Bacteria → Acidobacteria1545Open in IMG/M
3300007265|Ga0099794_10287586All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300007265|Ga0099794_10574190All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300007265|Ga0099794_10698571All Organisms → cellular organisms → Bacteria → Acidobacteria540Open in IMG/M
3300009038|Ga0099829_10000555All Organisms → cellular organisms → Bacteria19857Open in IMG/M
3300009038|Ga0099829_10371894All Organisms → cellular organisms → Bacteria → Acidobacteria1179Open in IMG/M
3300009088|Ga0099830_10058701All Organisms → cellular organisms → Bacteria2744Open in IMG/M
3300009088|Ga0099830_10093535All Organisms → cellular organisms → Bacteria2231Open in IMG/M
3300009088|Ga0099830_10299504All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300009088|Ga0099830_10305848All Organisms → cellular organisms → Bacteria → Acidobacteria1270Open in IMG/M
3300009089|Ga0099828_10351232All Organisms → cellular organisms → Bacteria1328Open in IMG/M
3300009089|Ga0099828_11822215All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300009143|Ga0099792_10334392All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300009143|Ga0099792_10790872All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium621Open in IMG/M
3300010379|Ga0136449_100069541All Organisms → cellular organisms → Bacteria7571Open in IMG/M
3300011120|Ga0150983_10788221All Organisms → cellular organisms → Bacteria → Acidobacteria933Open in IMG/M
3300011269|Ga0137392_10268720All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300011271|Ga0137393_10129607All Organisms → cellular organisms → Bacteria → Acidobacteria2089Open in IMG/M
3300012096|Ga0137389_10110899All Organisms → cellular organisms → Bacteria2195Open in IMG/M
3300012096|Ga0137389_10261779All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1456Open in IMG/M
3300012189|Ga0137388_10062927All Organisms → cellular organisms → Bacteria → Acidobacteria3059Open in IMG/M
3300012189|Ga0137388_10954184All Organisms → cellular organisms → Bacteria → Acidobacteria792Open in IMG/M
3300012202|Ga0137363_10043253All Organisms → cellular organisms → Bacteria → Acidobacteria3185Open in IMG/M
3300012202|Ga0137363_10262167All Organisms → cellular organisms → Bacteria → Acidobacteria1408Open in IMG/M
3300012202|Ga0137363_10808110All Organisms → cellular organisms → Bacteria → Acidobacteria795Open in IMG/M
3300012203|Ga0137399_10054174All Organisms → cellular organisms → Bacteria → Acidobacteria2930Open in IMG/M
3300012203|Ga0137399_10065891All Organisms → cellular organisms → Bacteria2698Open in IMG/M
3300012203|Ga0137399_10611174All Organisms → cellular organisms → Bacteria → Acidobacteria917Open in IMG/M
3300012203|Ga0137399_11600959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300012205|Ga0137362_10081452All Organisms → cellular organisms → Bacteria → Acidobacteria2699Open in IMG/M
3300012205|Ga0137362_11123070All Organisms → cellular organisms → Bacteria → Acidobacteria668Open in IMG/M
3300012361|Ga0137360_10017194All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia4752Open in IMG/M
3300012361|Ga0137360_11347166All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300012361|Ga0137360_11374899All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300012362|Ga0137361_10623115All Organisms → cellular organisms → Bacteria → Acidobacteria988Open in IMG/M
3300012582|Ga0137358_10562428All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300012582|Ga0137358_10815301All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300012683|Ga0137398_10002883All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus7485Open in IMG/M
3300012683|Ga0137398_10691995All Organisms → cellular organisms → Bacteria → Acidobacteria708Open in IMG/M
3300012685|Ga0137397_10178120All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300012685|Ga0137397_10193558All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1512Open in IMG/M
3300012685|Ga0137397_10307858All Organisms → cellular organisms → Bacteria → Acidobacteria1181Open in IMG/M
3300012685|Ga0137397_10343963All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1111Open in IMG/M
3300012685|Ga0137397_11300401All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300012918|Ga0137396_10034366All Organisms → cellular organisms → Bacteria → Acidobacteria3380Open in IMG/M
3300012918|Ga0137396_10969664All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300012922|Ga0137394_10248024All Organisms → cellular organisms → Bacteria1522Open in IMG/M
3300012922|Ga0137394_11194044All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300012923|Ga0137359_10623693All Organisms → cellular organisms → Bacteria → Acidobacteria944Open in IMG/M
3300012923|Ga0137359_10714515All Organisms → cellular organisms → Bacteria → Acidobacteria872Open in IMG/M
3300012925|Ga0137419_11899820All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300012927|Ga0137416_10876454All Organisms → cellular organisms → Bacteria → Acidobacteria797Open in IMG/M
3300012929|Ga0137404_12194240All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300012930|Ga0137407_11093080All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300012944|Ga0137410_10164769All Organisms → cellular organisms → Bacteria → Acidobacteria1698Open in IMG/M
3300012944|Ga0137410_11250893All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300012944|Ga0137410_11738385All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium549Open in IMG/M
3300015241|Ga0137418_10065333All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus3322Open in IMG/M
3300015241|Ga0137418_10234913All Organisms → cellular organisms → Bacteria → Acidobacteria1565Open in IMG/M
3300015241|Ga0137418_10988143All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300015245|Ga0137409_10031940All Organisms → cellular organisms → Bacteria → Acidobacteria5095Open in IMG/M
3300018468|Ga0066662_10088200All Organisms → cellular organisms → Bacteria2150Open in IMG/M
3300019789|Ga0137408_1379545All Organisms → cellular organisms → Bacteria2118Open in IMG/M
3300020004|Ga0193755_1002251All Organisms → cellular organisms → Bacteria → Acidobacteria6045Open in IMG/M
3300020170|Ga0179594_10133737All Organisms → cellular organisms → Bacteria → Acidobacteria910Open in IMG/M
3300020580|Ga0210403_10000017All Organisms → cellular organisms → Bacteria195338Open in IMG/M
3300020580|Ga0210403_10000305All Organisms → cellular organisms → Bacteria53593Open in IMG/M
3300020580|Ga0210403_10011068All Organisms → cellular organisms → Bacteria → Acidobacteria7327Open in IMG/M
3300020581|Ga0210399_10066152All Organisms → cellular organisms → Bacteria2922Open in IMG/M
3300020581|Ga0210399_10219347All Organisms → cellular organisms → Bacteria1584Open in IMG/M
3300020581|Ga0210399_10569012All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae939Open in IMG/M
3300020583|Ga0210401_10017858All Organisms → cellular organisms → Bacteria6841Open in IMG/M
3300021088|Ga0210404_10007948All Organisms → cellular organisms → Bacteria4285Open in IMG/M
3300021170|Ga0210400_10574036All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium930Open in IMG/M
3300021171|Ga0210405_10004681All Organisms → cellular organisms → Bacteria12752Open in IMG/M
3300021171|Ga0210405_10049343All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3333Open in IMG/M
3300021171|Ga0210405_10306971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1254Open in IMG/M
3300021171|Ga0210405_10313000All Organisms → cellular organisms → Bacteria → Acidobacteria1240Open in IMG/M
3300021178|Ga0210408_10188507All Organisms → cellular organisms → Bacteria1639Open in IMG/M
3300021180|Ga0210396_10377636All Organisms → cellular organisms → Bacteria → Acidobacteria1247Open in IMG/M
3300021401|Ga0210393_10004036All Organisms → cellular organisms → Bacteria → Acidobacteria11661Open in IMG/M
3300021420|Ga0210394_10858275All Organisms → cellular organisms → Bacteria → Acidobacteria791Open in IMG/M
3300021432|Ga0210384_10031991All Organisms → cellular organisms → Bacteria → Acidobacteria4908Open in IMG/M
3300021432|Ga0210384_10132676All Organisms → cellular organisms → Bacteria → Acidobacteria2235Open in IMG/M
3300021559|Ga0210409_10001102All Organisms → cellular organisms → Bacteria37403Open in IMG/M
3300021559|Ga0210409_10761219All Organisms → cellular organisms → Bacteria → Acidobacteria840Open in IMG/M
3300024330|Ga0137417_1056424All Organisms → cellular organisms → Bacteria → Acidobacteria873Open in IMG/M
3300025922|Ga0207646_11155699All Organisms → cellular organisms → Bacteria → Acidobacteria680Open in IMG/M
3300026320|Ga0209131_1399476All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300026334|Ga0209377_1171434All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales783Open in IMG/M
3300026377|Ga0257171_1032695All Organisms → cellular organisms → Bacteria → Acidobacteria890Open in IMG/M
3300026551|Ga0209648_10014738All Organisms → cellular organisms → Bacteria6822Open in IMG/M
3300026551|Ga0209648_10028254All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4898Open in IMG/M
3300026551|Ga0209648_10044935All Organisms → cellular organisms → Bacteria3808Open in IMG/M
3300026551|Ga0209648_10091819All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2508Open in IMG/M
3300026551|Ga0209648_10386334All Organisms → cellular organisms → Bacteria → Acidobacteria932Open in IMG/M
3300027643|Ga0209076_1001186All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus5214Open in IMG/M
3300027655|Ga0209388_1103540All Organisms → cellular organisms → Bacteria → Acidobacteria816Open in IMG/M
3300027655|Ga0209388_1178847All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300027667|Ga0209009_1097960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium744Open in IMG/M
3300027671|Ga0209588_1013236All Organisms → cellular organisms → Bacteria → Acidobacteria2515Open in IMG/M
3300027674|Ga0209118_1075592All Organisms → cellular organisms → Bacteria → Acidobacteria968Open in IMG/M
3300027678|Ga0209011_1174847All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300027846|Ga0209180_10019734All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3564Open in IMG/M
3300027846|Ga0209180_10021203All Organisms → cellular organisms → Bacteria → Acidobacteria3446Open in IMG/M
3300027862|Ga0209701_10009251All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus6419Open in IMG/M
3300027862|Ga0209701_10143586All Organisms → cellular organisms → Bacteria → Acidobacteria1462Open in IMG/M
3300027903|Ga0209488_10646293All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300028047|Ga0209526_10859395All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300028536|Ga0137415_10012629All Organisms → cellular organisms → Bacteria → Acidobacteria8377Open in IMG/M
3300028906|Ga0308309_10255986All Organisms → cellular organisms → Bacteria → Acidobacteria1466Open in IMG/M
3300029636|Ga0222749_10046567All Organisms → cellular organisms → Bacteria → Acidobacteria1902Open in IMG/M
3300031720|Ga0307469_10479968All Organisms → cellular organisms → Bacteria → Acidobacteria1084Open in IMG/M
3300031720|Ga0307469_10849705All Organisms → cellular organisms → Bacteria → Acidobacteria841Open in IMG/M
3300031720|Ga0307469_11978038All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300031740|Ga0307468_100576922All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium912Open in IMG/M
3300031753|Ga0307477_10000339All Organisms → cellular organisms → Bacteria55156Open in IMG/M
3300031820|Ga0307473_10159754All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300031823|Ga0307478_10132287All Organisms → cellular organisms → Bacteria1966Open in IMG/M
3300031962|Ga0307479_10258694All Organisms → cellular organisms → Bacteria → Acidobacteria1719Open in IMG/M
3300032160|Ga0311301_10255121All Organisms → cellular organisms → Bacteria2884Open in IMG/M
3300032180|Ga0307471_100644088All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1221Open in IMG/M
3300032180|Ga0307471_100808818All Organisms → cellular organisms → Bacteria → Acidobacteria1104Open in IMG/M
3300032180|Ga0307471_100918856All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300032180|Ga0307471_101853412All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales753Open in IMG/M
3300032180|Ga0307471_104011524All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300032205|Ga0307472_100410058All Organisms → cellular organisms → Bacteria1137Open in IMG/M
3300032205|Ga0307472_100597547All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales973Open in IMG/M
3300032205|Ga0307472_100801051All Organisms → cellular organisms → Bacteria → Acidobacteria861Open in IMG/M
3300032205|Ga0307472_102513801All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil54.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil11.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.16%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.42%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.37%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.37%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004100Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10156064853300000364SoilMIHFLAKIFRGFHFIFGISAPPPGQNERTFVFAWLGILACLITFGMTLFYVIPFLYFRK*
JGI1027J12803_10656783213300000955SoilHRFASPQGAMIHFLAKIFRGFHFIFGISAPPPGQNERTFVFAWLGILACLITFGMTLFYVIPFLYFRK*
JGI25617J43924_1000265033300002914Grasslands SoilMINLLAKIFRGLHFVLGISAPPPGGDERGFVFAWLGIAACIIAFCLVLFYVIPHLYFGR*
JGI25617J43924_1002087533300002914Grasslands SoilMIKFLAKIFRGFHFVFGISAPPPGRNERAFVLAWLGALACIIAFCVALFYVIPYLYFKR*
Ga0058904_130437123300004100Forest SoilMIKFLARLFRGFHLIFGISAPPEGENERTFVFAWMGIIACIIGFAVFLLYVIPAIYFRK*
Ga0070708_10013757623300005445Corn, Switchgrass And Miscanthus RhizosphereMIQFLAKIFRGFHFMFGISAPPPGQNECKFVLAWLGILASLIAFAMILFYVIPYLYFRK*
Ga0066686_1014125913300005446SoilMIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYVIPLLYFRK*
Ga0070765_10013385423300006176SoilVIPFLAKLFRGFHLIFGISSPPPGENERQFVFAWLGILAALAAFCTVLFYLIPLLYFRQ*
Ga0066659_1006131533300006797SoilMIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYIIPLLYFRK*
Ga0099791_1001391333300007255Vadose Zone SoilMIKFLAKIFRGFHFVLGISAPPPGRNERRFVFAWFGIVACIVAFSLVLFYVIPHLYFRR*
Ga0099791_1003837623300007255Vadose Zone SoilMIKFLAKIFRGFHFVLGISAPPPGQNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR*
Ga0099791_1007781633300007255Vadose Zone SoilMIQFLAIIFRGLHFIFGISAPPPGQNERKFVLAWLGIIACLIAFGMILFYVIPYLYFRQ*
Ga0099791_1024995813300007255Vadose Zone SoilMIQFLAKIFRGFHFIFGISAPPPGQNERTFVFAWLGILACLIAFCMILFCVIPYLYFRR*
Ga0099791_1062567213300007255Vadose Zone SoilMIHFLARIFRGFHFIFGISAPPPGHNERTFVFAWLGILACLIAFGMILFYVIPFLYFRK*
Ga0099793_1014335123300007258Vadose Zone SoilMIKFLANIFRGLHFVLGISTPPPGRNERGFVFAWLGIVACIIAFCLVLFYVIPHLYFRR*
Ga0099793_1027527623300007258Vadose Zone SoilMIHFLAKIFRGLHFIFGISAPPPGQNERKFVLAWLGIIACLIAFGMILFYVIPYLYLRK*
Ga0099794_1008733323300007265Vadose Zone SoilMIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYLIPFLYFRK*
Ga0099794_1028758623300007265Vadose Zone SoilMIHFLAKIFRGFSFIFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYLIPFLYFRK*
Ga0099794_1057419013300007265Vadose Zone SoilMINLLPKIFRGLHFVLGISAPPPGGDERGFVFAWLGIAACIIAFCLVLFYVIPHLYFGR*
Ga0099794_1069857113300007265Vadose Zone SoilMIHFLAKMFRGLHFIFGISAPPPGQNERKFVFAWLGILACLIAFGMTLFYVIPYLYFRK*
Ga0099829_10000555233300009038Vadose Zone SoilMIQFLAKIFRGFHFMFGISAPPPGQNERKFVLAWLGILASLIAFAMILFYAIPYLYFRK*
Ga0099829_1037189433300009038Vadose Zone SoilMIKFLAKIFRGLHFVLGISSPPPDRNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR*
Ga0099830_1005870143300009088Vadose Zone SoilMIKFLAKIFRGLHFVLGISAPPPDRNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR*
Ga0099830_1009353543300009088Vadose Zone SoilMIKFLAKIFRGFHFVFGISAPPPGRNDRTFVFAWLGILACIIAFCFVLFRVIPYLYFRR*
Ga0099830_1029950433300009088Vadose Zone SoilMIQFLAKIFRGFHFMFGISAPPPGQNERKFVLAWLGILASLIAFAMILFYAISYLYFRK*
Ga0099830_1030584833300009088Vadose Zone SoilMIKFLAKIFRGFHFVFGISAPPPGRNERAFVFAWLGALACIITFCVALFYVIPYLYFRR*
Ga0099828_1035123223300009089Vadose Zone SoilMIKFLAKIFRGFHFVFGISAPPPGRNDRTFVFAWLGILACFIAFCFVLFRVIPYLYFRR*
Ga0099828_1182221523300009089Vadose Zone SoilMIKFLAKIFRGFHFVFGISAPPPGRNDRAFVFAWLGILACFIAFCFVLFRVIPYLYFRR*
Ga0099792_1033439233300009143Vadose Zone SoilMIQFLAKIFRGFHFMFGISAPPPGQNERKFVLAWLGIIACLIAFGMILFYVIPYLYFRQ*
Ga0099792_1079087213300009143Vadose Zone SoilMIKFLAKIFRGFHFVLGISAPPPGQNERGFVFAWLGIVACIVAFSLVLFYIIPHLYFRR*
Ga0136449_10006954133300010379Peatlands SoilVIPFLAKLFRGVHLIFGVSAPPPGHNETKFVFAWLGILAALVIFCAVLFYLIPFLYFRQ*
Ga0150983_1078822123300011120Forest SoilMIKFLARILRGFHLIFGISAPPEGENERTFVFAWLGIIACVIGFTVFLLYVIPALYFRK*
Ga0137392_1026872023300011269Vadose Zone SoilMIKFLAKIFRGFHFVFGISAPPPGRNDRTFVFAWLGIVACFIAFCVVLFRVIPYLYFRR*
Ga0137393_1012960713300011271Vadose Zone SoilMIKFLAKIFRGLHFVLGISAPPPERNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR*
Ga0137389_1011089943300012096Vadose Zone SoilFVLGISAPPPDRNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR*
Ga0137389_1026177913300012096Vadose Zone SoilLAKIFRGIHFVIGISAPPPGRNERTFVFAWLGILACFIAFCVVLFRVIPYLYFRR*
Ga0137388_1006292763300012189Vadose Zone SoilRKGSRPDDVLSSCHRFAFPQGAMIHFLAKIFRGIHFIFGISAPPPGQNERTFVFAWLGIIACLIAFGMILFYAIPFLYFRK*
Ga0137388_1095418413300012189Vadose Zone SoilMIKFLAKIFRGFHFVFGISAPPPGRSDRAFVFAWLGILACIIAFCFVLFRVIPYLYFRR*
Ga0137363_1004325313300012202Vadose Zone SoilKIFRGFHFVLGISAPPPGRNERRFVFAWFGIVACIVAFSLVLFYVIPHLYFRR*
Ga0137363_1026216723300012202Vadose Zone SoilMIKFLAKIFRGFHFVLGISVPPPGRNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR*
Ga0137363_1080811023300012202Vadose Zone SoilMIQFLAKIFRGLHFIFGISAPPPGHNERTFVFAWLGIIACLMAFGMILLYAIPFLYFRK*
Ga0137399_1005417423300012203Vadose Zone SoilMIHFLARLFRGLHFIFGISAPPPGHNERAFVLAWLGIIACLIAFCMVLFYVIPFLYFRK*
Ga0137399_1006589133300012203Vadose Zone SoilMIHFLAKIFRGFHFIFGISAPPPGGDERTFVFTWLGIIACLIAFGMMLFYVIPYLYLRK*
Ga0137399_1061117413300012203Vadose Zone SoilMIQFLAKIFRGLHFVFGISAPPPGQNERKFVFAWLGILACFIAFGMILFYVIPFLYFRK*
Ga0137399_1160095913300012203Vadose Zone SoilMIHFLAKIFRGLHFIFGISAPPPGQNERTFVLAWLGILACLIAFGMILFYVIPFLYFRK*
Ga0137362_1008145233300012205Vadose Zone SoilMIKFLARIFRGFHFVLGISSPPPGRNERGFVFAWLGIVACIVAFSLVLFYVIPRLYFRR*
Ga0137362_1112307013300012205Vadose Zone SoilMIHFLAKIFRGIHFIFGISAPPPGQNERTFVFAWLGIIACLMAFGMILLYAIPFLYFRK*
Ga0137360_1001719483300012361Vadose Zone SoilMIQFLAKIFRGLHFIFGISAPPPGHNERTFVFAWLGIIACLMAFGMILLYAIPFLYSRK*
Ga0137360_1134716623300012361Vadose Zone SoilMIHFLAKIFRGIHFIFGISAPPPGQNERTFVFAWLGIIACLMAFGMILLYAIPFLYFR
Ga0137360_1137489923300012361Vadose Zone SoilMIHFLAKIFRGIHFIFGISAPPPGQNERTFVFAWLGIIACLIAFGMTLFYAIPFLYFRK*
Ga0137361_1062311513300012362Vadose Zone SoilMIQFLAKIFQGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYVIPLLYFRK*
Ga0137358_1056242823300012582Vadose Zone SoilMIKFLAKIFRGLHFVLGISAPPPGRNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR*
Ga0137358_1081530123300012582Vadose Zone SoilMIHFLARIFRGLHFIFGISAPPPGHHERAFVLAWLGIMACLIAFCMVLFYVIPFLYFRK*
Ga0137398_1000288383300012683Vadose Zone SoilMIKFLAKIFRGFHFVLGISAPPPGRNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR*
Ga0137398_1069199533300012683Vadose Zone SoilMIKFLAKIFRGFHFVLGISAPPPGRNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR
Ga0137397_1017812023300012685Vadose Zone SoilMIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMIMFYVIPLLYFRK*
Ga0137397_1019355813300012685Vadose Zone SoilMIHFLAGIFRGFHFIFGISAPPPGRNERTFVFAWLGIIACLIAFGMILFYVIPFLYFRK*
Ga0137397_1030785823300012685Vadose Zone SoilMIHFLARIFRGFHFIFGISAPPPGHNERTFVFAWLGILACLIAFGMMLFYVIPFLYFRK*
Ga0137397_1034396313300012685Vadose Zone SoilMIQFLAKIFRGIHFIFGISAPPPGQNERTFVFAWLGIIACLIAFGMILFYAIPFLYFRK*
Ga0137397_1130040113300012685Vadose Zone SoilMIHFLAKIFRGLHFIFGISAPPPGQNERTFVLAWLGILACLMAFGMILFYVIPSLYFRK*
Ga0137396_1003436623300012918Vadose Zone SoilMIHFLAKIFRGFHFIFGISGPPPGGDERTFVFTWLGIIACLIAFGMMLFYVIPYLYLRK*
Ga0137396_1096966413300012918Vadose Zone SoilMIHFLAKIFRGLHFIFGISAPPPGQNERTFVFAWLGIIACLMAFGMILFYAIPFLYFRK*
Ga0137394_1024802413300012922Vadose Zone SoilASHLRGGAMIHFLAKIFRGFSFIFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYFIPFLYFRK*
Ga0137394_1119404423300012922Vadose Zone SoilLHFIFGISAPPPGQNERTFVLAWLGILACLMAFGMILFYVIPSLYFRK*
Ga0137359_1062369313300012923Vadose Zone SoilMIHFLAKIFRGLHFIFGISAPPLGQNERTFVLAWLGILTCLIAFGMILFYFIPFLYFRK*
Ga0137359_1071451523300012923Vadose Zone SoilMIHFLAKIFRGLHFIFGISAPPPGQNERTFVFAWLGIIACLMAFGMILFYAIPFLYFKK*
Ga0137419_1189982013300012925Vadose Zone SoilMIHFLAGIFRGFHFLFGISAPPPGQNERTFVFAWLGIIACLIAFGMILFYVIP
Ga0137416_1087645423300012927Vadose Zone SoilFHFIFGISAPPPGRSERTFVFAWFGILACLIAFCMILFYVIPYLYFRP*
Ga0137404_1219424023300012929Vadose Zone SoilMIQFLAKIFRGFHFIFGISAPPPGPNERTFVLAWLGILACLVAFGMILFYLIPFLYFRK*
Ga0137407_1109308023300012930Vadose Zone SoilMIHFLARIFRGFHFIFGVSAPPPGQNERTFVFAWLGILACLIAFGMILFYVIPFLYFRK*
Ga0137410_1016476923300012944Vadose Zone SoilMIHFLARIFRGFHFIFGISAPPPGHNERTFVSAWLGILACLIAFGMILFYVIPFLYFRK*
Ga0137410_1125089333300012944Vadose Zone SoilLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYLIPFLYFRK*
Ga0137410_1173838523300012944Vadose Zone SoilLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYVIPLLYFRK*
Ga0137418_1006533333300015241Vadose Zone SoilVIHFLARIFRGFHFIFGISAPPPGRSERTFVFAWFGILACLIAFCMILFYVIPYLYFGP*
Ga0137418_1023491323300015241Vadose Zone SoilMIHFLAGIFRGFHFLFGISAPPPGQNERTFVFAWLGIIACLIAFGMILFYVIPYLYFRK*
Ga0137418_1098814323300015241Vadose Zone SoilMIHFLARIFRGFHFVFGISAPPPGHNERTFVFAWLGILACLIAFGMILFYVIPFLYFRK*
Ga0137409_1003194083300015245Vadose Zone SoilMIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYGIPLLYFRK*
Ga0066662_1008820033300018468Grasslands SoilMIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYVIPLLYFRK
Ga0137408_137954513300019789Vadose Zone SoilMIHFLAKIFRGFSFIFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYLIPFLYFRK
Ga0193755_100225193300020004SoilMIHFLAKIFRGFHFIFGISAPPPGQNERTFVFAWLGILACLITFGMTLFYVIPFLYFRK
Ga0179594_1013373723300020170Vadose Zone SoilMIKFLAKIFRGLHFVLGISAPPPGRSERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR
Ga0210403_100000171023300020580SoilVIPFLAKLFRGFHLIFGISSPPPGENERQFVFAWLGILAALAAFCAVLFYLIPLLYFRQ
Ga0210403_10000305403300020580SoilMIKFLAKIFRGVHLIFGVSAPPPGLNERKFVLAWLGIIACLVAFCMVLFYVIPALYFRQ
Ga0210403_1001106873300020580SoilVIPFLAKLFRGFHLIFGVSAPPPGQNERQFVFAWLGILAALAAFCAVLFYLIPLLYFRQ
Ga0210399_1006615253300020581SoilMIKFLAKIFRGVHLIFGVSAPPPGLNERKFVLAWLGIIACLVAFCMILFYVIPALYFRQ
Ga0210399_1021934723300020581SoilMIKFLARIFRGFHLIFGISAPPEGENERTFVFAWLGIIACVIGFTVFLLYVIPALYFRK
Ga0210399_1056901223300020581SoilMIKFLAKIFRGVHLIFGVSAPPPGLNERKFVLAWLGVIACLIAFCMILFYAIPALYFRP
Ga0210401_1001785883300020583SoilMIKFLAKIFRGVHLIFGVSAPPPGLNERKFVLAWLGIIACLIAFCMILFYAIPALYFRP
Ga0210404_1000794823300021088SoilVISFLAKFFRGVHLIFGVSAPPPGENERRFVFAWLGILAALAAFCAVLFYLIPFLYFRQ
Ga0210400_1057403613300021170SoilDAMIKFLAKIFRGVHLIFGVSAPPPGLNERKFVLAWLGVIACLIAFCMILFYAIPALYFR
Ga0210405_1000468173300021171SoilMIKFLAKIFRGVHFVLGISAPPGGNERAFVFAWLGILACVVAFCAVLFYVIPHLYFRR
Ga0210405_1004934353300021171SoilVIPFLAKLFRGFHLIFGVSAPPPGENERQFVFAWLGILAALVIFCTVLFYFIPFLYFRQ
Ga0210405_1030697113300021171SoilKLFRGFHLIFGVSAPPPGQNERQFVFAWLGILAALAAFCAVLFYLIPLLYFRQ
Ga0210405_1031300023300021171SoilVIPFLAKLFRGFHLIFGVSAPPPGQNERQFVFSWLGILAALVIFCTVLFYLIPSLYFRQ
Ga0210408_1018850723300021178SoilMIKFLAKIFRGVHLIFGVSAPPPGLNERKFVLAWLGIIACLIAFCMVLFYAIPALYFRQ
Ga0210396_1037763623300021180SoilVIPFLAKLFRGFHLIFGISSPPPGENERQFVFAWLGILAALAAFCAVLFYLIPLLYFPQ
Ga0210393_10004036163300021401SoilLAKLFRGFHLIFGVSAPPPGQNERQFVFAWLGILAALAAFCAVLFYLIPLLYFRQ
Ga0210394_1085827523300021420SoilMIKFLARILRGFHLIFGISAPPEGENERTFVFAWLGIIACVIGFTVFLLYVIPALYFRK
Ga0210384_1003199133300021432SoilVIPFLAKLFRGFHLIFGISSPPPGENERQFVLAWLGILAALAAFCAVLFYLIPLLYFRQ
Ga0210384_1013267633300021432SoilMIKFLARLFRGFHLIFGISAPPEGENERTFVFAWLGIIACIIGFAVFLLYVIPAIYFRK
Ga0210409_10001102463300021559SoilCIYPPREGVVIPFLAKLFRGFHLIFGISSPPPGENERQFVFAWLGILAALAAFCAVLFYLIPLLYFHQ
Ga0210409_1076121923300021559SoilMIKFLAKIFRGVHFVLGISAPPGGNERAFVFVWLGILACVVAFCAVLFYVIPHLYFRR
Ga0137417_105642423300024330Vadose Zone SoilMIQFLAIIFRGLHFIFGISAPPPGQNERKFVLAWLGIIACLIAFGMILFYVIPYLYFRQ
Ga0207646_1115569923300025922Corn, Switchgrass And Miscanthus RhizosphereMIQFLAKIFRGFHFMFGISAPPPGQNECKFVLAWLGILASLIAFAMILFYVIPYLYFRK
Ga0209131_139947613300026320Grasslands SoilFVLGISAPPPGQNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR
Ga0209377_117143413300026334SoilMIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYVIPLLY
Ga0257171_103269513300026377SoilMIQFLAKIFRGFHFMFGISAPPPGQNERKFVLAWLGILASLIAFAMILFYAIPYLYFRK
Ga0209648_1001473883300026551Grasslands SoilMINLLAKIFRGLHFVLGISAPPPGGDERGFVFAWLGIAACIIAFCLVLFYVIPHLYFGR
Ga0209648_1002825453300026551Grasslands SoilMIKFLAKIFRGFHFALGISAPPPGQNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR
Ga0209648_1004493533300026551Grasslands SoilMIKFLAKIFRGFHFVFGISAPPPGRNERAFVLAWLGALACIIAFCVALFYVIPYLYFKR
Ga0209648_1009181923300026551Grasslands SoilMIKFLAKIFRGFHFVFGISAPPPGRNERAFVFAWLGILACIIAFCLVLFYVIPYLYFRR
Ga0209648_1038633423300026551Grasslands SoilMIKFLAKIFRGFHFVLGISAPPPERNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR
Ga0209076_100118623300027643Vadose Zone SoilMIKFLAKIFRGFHFVLGISAPPPGQNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR
Ga0209388_110354013300027655Vadose Zone SoilMIQFLAKIFRGFHFIFGISAPPPGQNERTFVFAWLGILACLIAFCMILFCVIPYLYFRR
Ga0209388_117884713300027655Vadose Zone SoilMIHFLAKIFRGIHFIFGISAPPPGQNERTFVFAWLGIIACLIAFGMTLFYAIPFLYFRK
Ga0209009_109796023300027667Forest SoilMIQFLAKIFRGLHFIFGISAPPPGHNERTFVFAWLGILASLIAFGMILFYAIPFLYFRK
Ga0209588_101323613300027671Vadose Zone SoilMIKFLAKIFRGFHFVLGISAPPPGRNERRFVFAWFGIVACIVAFSLVLFYVIPHLYFRR
Ga0209118_107559223300027674Forest SoilMIHFLARIFRGFHFIFGISAPPPGDNERTFVLAWLGIVACLIAFCMILFYAIPFLYFRK
Ga0209011_117484713300027678Forest SoilMIHFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLSILACFIAFGLTLLYLIPFLYFRK
Ga0209180_1001973443300027846Vadose Zone SoilMIKFLAKIFRGFHFVFGISAPPPGRNDRTFVFAWLGILACIIAFCFVLFRVIPYLYFRR
Ga0209180_1002120323300027846Vadose Zone SoilMIQFLAKIFRGFHFMFGISAPPPGQNERKFVLAWLGILASLIAFAMILFYAISYLYFRK
Ga0209701_1000925163300027862Vadose Zone SoilMIHFLAKMFRGLHFIFGISAPPPGQNERKFVFAWLGILACLIAFGMTLFYVIPYLYFRK
Ga0209701_1014358633300027862Vadose Zone SoilMIKFLAKIFRGLHFVLGISAPPPDRNERGFVFAWLGIVACIVAFSLVLFYVIPHLYFRR
Ga0209488_1064629313300027903Vadose Zone SoilMIKFLAKIFRGFHFVLGISAPPPGQNERGFVFAWLGIVACIVAFSLVLFYIIPHLYFRR
Ga0209526_1085939513300028047Forest SoilLNLQHRFAFPQGAMIHFLAKIFRGFHFIFGISAPPPGQNERTFVFAWLGILACLTAFGLTLLYLIPFLYFRK
Ga0137415_1001262913300028536Vadose Zone SoilMIKFLANIFRGLHFVLGISTPPPGRNERGFVFAWLGIVACIIAFCLVLFYVIPHLYFRR
Ga0308309_1025598613300028906SoilVIPFLAKLFRGFHLIFGISSPPPGENERQFVFAWLGILAALAAFCTVLFYLIPLLYFRQ
Ga0222749_1004656733300029636SoilMIKFLARLFRGFHLIFGISAPPEGENERTFVFAWMGIIACIIGFAVFLLYVIPAIYFRK
Ga0307469_1047996833300031720Hardwood Forest SoilMIQFLAKIFRGIHFVFGISAPPPGENERAFVFAWLGILASVIAFCTILFYVIPYLYFRR
Ga0307469_1084970523300031720Hardwood Forest SoilMIQFLAKIFRGFHFIFGISAPPPGQNERTFVFAWLGILACLVAFGMILFYLIPFLYFRK
Ga0307469_1197803823300031720Hardwood Forest SoilMIQFLAKVFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYFIPFLYFRK
Ga0307468_10057692223300031740Hardwood Forest SoilMIHFLAKIFRGFHFMLGISAPPPGQNERTFVFAWLGILACLTAFGLTLLYLIPFLYFRK
Ga0307477_10000339423300031753Hardwood Forest SoilVIQFLAKLFRGFHLIFGISSPPPGENERQFVLAWLGILAALVAFCAVLFYLIPFLYFHQ
Ga0307473_1015975423300031820Hardwood Forest SoilMIQFLAKIFRGFHFIFGISAPPPGQNERAFVFAWLGILASVIAFCTILFYVIPYLYFRR
Ga0307478_1013228733300031823Hardwood Forest SoilVIPFLAKFFRGVHLVFGVSAPPPGQDETKFVLAWLGILAALAAFCAVLFYLIPLLYFRQ
Ga0307479_1025869433300031962Hardwood Forest SoilMIKFLANIFRGLHFVLGISTPPPGRDERGFVFAWLGIVACMVAFCLVLFYVIPHLYFRR
Ga0311301_1025512113300032160Peatlands SoilVIPFLAKLFRGVHLIFGVSAPPPGHNETKFVFAWLGILAALVIFCAVLFYLIPFLYFRQ
Ga0307471_10064408833300032180Hardwood Forest SoilMIHFLAKIFRGFSFIFGISAPPPGHNERTFVFAWLGIIACLIAFCMILFYAIPFLYFRK
Ga0307471_10080881823300032180Hardwood Forest SoilMIQILAKIFRGFHFIFGISAPPPGQNERAFVFGWLGILASVIAFCTILFYVIPYLYFRR
Ga0307471_10091885623300032180Hardwood Forest SoilMIQFLAKIFRGFSFIFGISAPPPGQNERTFVLVWLGILACLVAFGMILFYLIPFLYFKK
Ga0307471_10185341213300032180Hardwood Forest SoilMIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLIAFGMILFYFIPFLYFRK
Ga0307471_10401152413300032180Hardwood Forest SoilMIEFLAKIFRGFHLIFGVSAPPPGHDERKFVLAWLGIIACVIAFCMVLFYVIPASYFRK
Ga0307472_10041005823300032205Hardwood Forest SoilMIQFLAKIFRGFHFMFGISAPPPGQNERTFVFAWLGILACLLAFGMILFYVIPYLYFRK
Ga0307472_10059754733300032205Hardwood Forest SoilMIHFLAKIFRGFSFIFGISAPPPGQNERTFVFAWLGIIACLIAFGMILFYLIPFLYFRK
Ga0307472_10080105123300032205Hardwood Forest SoilMIHFLAKIFRGFSFIFGISAPPPGQNERTFVLTWLGILACLVAFGMVLFYLIPFLYFRK
Ga0307472_10251380123300032205Hardwood Forest SoilMIQFLAKVFRGFHFIFGISAPPPGQNERAFVFAWLGILASVIAFCTILFYVIPYLYFRR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.