Metagenome / Metatranscriptome Family F049785

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049785
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	50 residues
Representative Sequence	VAYDTVASAIAPYADAAASQVAQRLDTEVLALLRHATGIPATATP
Number of Associated Samples	129
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.85 %
% of genes near scaffold ends (potentially truncated)	92.47 %
% of genes from short scaffolds (< 2000 bps)	93.15 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.712 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.877 % of family members)
Environment Ontology (ENVO)	Unclassified (30.137 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.849 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.73% β-sheet: 0.00% Coil/Unstructured: 60.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00230	MIP	17.81
PF01361	Tautomerase	9.59
PF13191	AAA_16	5.48
PF12697	Abhydrolase_6	4.79
PF14417	MEDS	2.74
PF02467	Whib	2.74
PF03352	Adenine_glyco	2.05
PF02332	Phenol_Hydrox	2.05
PF07366	SnoaL	1.37
PF00561	Abhydrolase_1	1.37
PF00753	Lactamase_B	1.37
PF00196	GerE	1.37
PF13419	HAD_2	0.68
PF08734	GYD	0.68
PF07690	MFS_1	0.68
PF07730	HisKA_3	0.68
PF13520	AA_permease_2	0.68
PF04672	Methyltransf_19	0.68
PF13673	Acetyltransf_10	0.68
PF00296	Bac_luciferase	0.68
PF12804	NTP_transf_3	0.68
PF00160	Pro_isomerase	0.68
PF00378	ECH_1	0.68
PF08327	AHSA1	0.68
PF04286	DUF445	0.68
PF00440	TetR_N	0.68
PF03551	PadR	0.68
PF13561	adh_short_C2	0.68
PF00106	adh_short	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	17.81
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	9.59
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	2.05
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.68
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.68
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.68
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.68
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	0.68
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.68
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.68
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.68
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	0.68
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.68
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.68

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.40 %
Unclassified	root	N/A	22.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.71 %
Unclassified	root	N/A	22.60 %
Viruses	superkingdom	All Organisms → Viruses	0.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.71 %
Unclassified	root	N/A	22.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	58.90 %
Unclassified	root	N/A	22.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.26 %
Unclassified	root	N/A	22.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.19 %
Unclassified	root	N/A	22.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.11 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.37 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.37 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.37 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.68 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.68 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.11 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.37 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.68 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	0.68 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.68 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.05 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.37 %
Actinacidiphila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila	0.68 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.68 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.68 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.37 %
Mycolicibacterium iranicum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium iranicum	0.68 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.68 %
unclassified Nocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia	0.68 %
Pseudonocardia acidicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acidicola	0.68 %
Actinacidiphila acididurans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila acididurans	0.68 %
Catenulispora rubra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora rubra	0.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.60 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.37 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.37 %
Streptomyces sp. uw30	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. uw30	0.68 %
Nocardia sp. DSM 111727	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. DSM 111727	0.68 %
Mycolicibacterium iranicum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium iranicum	0.68 %
Pseudonocardia acidicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acidicola	0.68 %
Actinacidiphila acididurans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila acididurans	0.68 %
Catenulispora rubra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora rubra	0.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10468759	Not Available	508	Open in IMG/M
3300004635\|Ga0062388_100968435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824	Open in IMG/M
3300005336\|Ga0070680_100854520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	785	Open in IMG/M
3300005435\|Ga0070714_101211463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300005436\|Ga0070713_101035013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	792	Open in IMG/M
3300005439\|Ga0070711_100390015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1128	Open in IMG/M
3300005467\|Ga0070706_100214378	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300005536\|Ga0070697_100528107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1034	Open in IMG/M
3300005538\|Ga0070731_10264605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1141	Open in IMG/M
3300005541\|Ga0070733_10733041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300005591\|Ga0070761_10832574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300005602\|Ga0070762_10889264	Not Available	607	Open in IMG/M
3300005602\|Ga0070762_11244393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300005712\|Ga0070764_10235194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1039	Open in IMG/M
3300005712\|Ga0070764_10490037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300005712\|Ga0070764_10821945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300005764\|Ga0066903_103937355	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005921\|Ga0070766_10238960	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300005921\|Ga0070766_11045436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	563	Open in IMG/M
3300006028\|Ga0070717_10819339	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300006162\|Ga0075030_100176845	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300006176\|Ga0070765_100161964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2005	Open in IMG/M
3300006176\|Ga0070765_101453366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300006176\|Ga0070765_101765467	Not Available	581	Open in IMG/M
3300006176\|Ga0070765_101776637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300006854\|Ga0075425_100551015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1327	Open in IMG/M
3300006914\|Ga0075436_100005813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8468	Open in IMG/M
3300009038\|Ga0099829_11687813	All Organisms → cellular organisms → Bacteria → Terrabacteria group	521	Open in IMG/M
3300009147\|Ga0114129_11740578	Not Available	760	Open in IMG/M
3300009162\|Ga0075423_10374983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1492	Open in IMG/M
3300010047\|Ga0126382_12049634	Not Available	546	Open in IMG/M
3300010341\|Ga0074045_10402026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acidicola	888	Open in IMG/M
3300010359\|Ga0126376_12334309	Not Available	581	Open in IMG/M
3300010362\|Ga0126377_10441960	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300010376\|Ga0126381_101014097	Not Available	1198	Open in IMG/M
3300010399\|Ga0134127_10404196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1351	Open in IMG/M
3300010401\|Ga0134121_10821215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300011120\|Ga0150983_15984498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1278	Open in IMG/M
3300012361\|Ga0137360_10974191	All Organisms → cellular organisms → Bacteria → Terrabacteria group	732	Open in IMG/M
3300012971\|Ga0126369_11310975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300012988\|Ga0164306_10454625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila acididurans	975	Open in IMG/M
3300014169\|Ga0181531_10595146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	685	Open in IMG/M
3300014745\|Ga0157377_10036184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2714	Open in IMG/M
3300014969\|Ga0157376_11020612	Not Available	850	Open in IMG/M
3300016270\|Ga0182036_11190085	Not Available	633	Open in IMG/M
3300016294\|Ga0182041_11171973	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300016341\|Ga0182035_10334179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1254	Open in IMG/M
3300016371\|Ga0182034_10246717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1406	Open in IMG/M
3300016422\|Ga0182039_12071082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300016445\|Ga0182038_10551341	Not Available	990	Open in IMG/M
3300017924\|Ga0187820_1061783	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300017926\|Ga0187807_1077662	All Organisms → Viruses → Predicted Viral	1036	Open in IMG/M
3300017926\|Ga0187807_1150765	All Organisms → cellular organisms → Bacteria → Terrabacteria group	743	Open in IMG/M
3300017928\|Ga0187806_1019276	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300017947\|Ga0187785_10103132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300017959\|Ga0187779_10270320	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300017961\|Ga0187778_10437963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300017974\|Ga0187777_10134602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1642	Open in IMG/M
3300018007\|Ga0187805_10645282	Not Available	502	Open in IMG/M
3300018009\|Ga0187884_10422107	Not Available	536	Open in IMG/M
3300018033\|Ga0187867_10516629	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300018035\|Ga0187875_10691036	Not Available	536	Open in IMG/M
3300018046\|Ga0187851_10186819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300018046\|Ga0187851_10641822	Not Available	599	Open in IMG/M
3300018057\|Ga0187858_10569935	All Organisms → cellular organisms → Bacteria → Terrabacteria group	685	Open in IMG/M
3300020579\|Ga0210407_10226964	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1453	Open in IMG/M
3300020581\|Ga0210399_10092523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2465	Open in IMG/M
3300020582\|Ga0210395_10096876	Not Available	2180	Open in IMG/M
3300021178\|Ga0210408_11309665	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300021180\|Ga0210396_10177925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1905	Open in IMG/M
3300021180\|Ga0210396_11673098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300021401\|Ga0210393_10493036	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1000	Open in IMG/M
3300021402\|Ga0210385_11031637	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300021404\|Ga0210389_10496052	Not Available	961	Open in IMG/M
3300021405\|Ga0210387_10223092	Not Available	1642	Open in IMG/M
3300021405\|Ga0210387_11198361	All Organisms → cellular organisms → Bacteria → Terrabacteria group	659	Open in IMG/M
3300021406\|Ga0210386_10264740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium iranicum	1468	Open in IMG/M
3300021407\|Ga0210383_10570473	Not Available	976	Open in IMG/M
3300021407\|Ga0210383_10600779	Not Available	948	Open in IMG/M
3300021432\|Ga0210384_11186631	Not Available	667	Open in IMG/M
3300021474\|Ga0210390_11290431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300021475\|Ga0210392_10516706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	881	Open in IMG/M
3300021477\|Ga0210398_11231966	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300021478\|Ga0210402_10356017	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300021478\|Ga0210402_10700113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	936	Open in IMG/M
3300021478\|Ga0210402_10898350	All Organisms → cellular organisms → Bacteria → Terrabacteria group	812	Open in IMG/M
3300021479\|Ga0210410_10138000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2169	Open in IMG/M
3300021559\|Ga0210409_10084381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2939	Open in IMG/M
3300022523\|Ga0242663_1139032	All Organisms → cellular organisms → Bacteria → Terrabacteria group	514	Open in IMG/M
3300022718\|Ga0242675_1043263	All Organisms → cellular organisms → Bacteria → Terrabacteria group	731	Open in IMG/M
3300022724\|Ga0242665_10207967	All Organisms → cellular organisms → Bacteria → Terrabacteria group	648	Open in IMG/M
3300025898\|Ga0207692_10351108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300025898\|Ga0207692_10664244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. uw30	674	Open in IMG/M
3300025915\|Ga0207693_10781696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora rubra	736	Open in IMG/M
3300025916\|Ga0207663_10316245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300025928\|Ga0207700_11784080	Not Available	541	Open in IMG/M
3300026374\|Ga0257146_1043120	Not Available	731	Open in IMG/M
3300027110\|Ga0208488_1009624	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300027165\|Ga0208608_108594	All Organisms → cellular organisms → Bacteria → Terrabacteria group	660	Open in IMG/M
3300027168\|Ga0208239_1024934	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300027729\|Ga0209248_10022259	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300027737\|Ga0209038_10029404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1629	Open in IMG/M
3300027829\|Ga0209773_10106199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300027846\|Ga0209180_10394532	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300027879\|Ga0209169_10370927	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300027894\|Ga0209068_10101418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1519	Open in IMG/M
3300027895\|Ga0209624_10210641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1291	Open in IMG/M
3300028379\|Ga0268266_11212788	All Organisms → cellular organisms → Bacteria → Terrabacteria group	730	Open in IMG/M
3300028381\|Ga0268264_11145445	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300028747\|Ga0302219_10315557	All Organisms → cellular organisms → Bacteria → Terrabacteria group	609	Open in IMG/M
3300028906\|Ga0308309_11152115	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300030511\|Ga0268241_10037984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1001	Open in IMG/M
3300031544\|Ga0318534_10014889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4003	Open in IMG/M
3300031545\|Ga0318541_10168028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1208	Open in IMG/M
3300031549\|Ga0318571_10098018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300031572\|Ga0318515_10272968	Not Available	907	Open in IMG/M
3300031680\|Ga0318574_10286465	Not Available	956	Open in IMG/M
3300031708\|Ga0310686_106493219	Not Available	549	Open in IMG/M
3300031708\|Ga0310686_110089650	All Organisms → cellular organisms → Bacteria → Terrabacteria group	531	Open in IMG/M
3300031708\|Ga0310686_114978239	Not Available	516	Open in IMG/M
3300031715\|Ga0307476_10197210	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1461	Open in IMG/M
3300031720\|Ga0307469_11076699	All Organisms → cellular organisms → Bacteria → Terrabacteria group	754	Open in IMG/M
3300031744\|Ga0306918_10477125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	976	Open in IMG/M
3300031747\|Ga0318502_10446838	Not Available	772	Open in IMG/M
3300031770\|Ga0318521_10739159	Not Available	598	Open in IMG/M
3300031771\|Ga0318546_11215480	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300031782\|Ga0318552_10065658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1745	Open in IMG/M
3300031792\|Ga0318529_10087313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1395	Open in IMG/M
3300031793\|Ga0318548_10398169	Not Available	675	Open in IMG/M
3300031819\|Ga0318568_10156636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1394	Open in IMG/M
3300031821\|Ga0318567_10899355	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031860\|Ga0318495_10160747	Not Available	1013	Open in IMG/M
3300031896\|Ga0318551_10761589	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031910\|Ga0306923_11642393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300031912\|Ga0306921_10791282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1084	Open in IMG/M
3300031942\|Ga0310916_11553451	Not Available	538	Open in IMG/M
3300031946\|Ga0310910_10060410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2703	Open in IMG/M
3300031954\|Ga0306926_10332225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1880	Open in IMG/M
3300032008\|Ga0318562_10009316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4837	Open in IMG/M
3300032051\|Ga0318532_10075126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1179	Open in IMG/M
3300032055\|Ga0318575_10474759	Not Available	635	Open in IMG/M
3300032065\|Ga0318513_10166017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1057	Open in IMG/M
3300032076\|Ga0306924_10303223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1833	Open in IMG/M
3300032515\|Ga0348332_14281082	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300032895\|Ga0335074_10477773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → unclassified Nocardia → Nocardia sp. DSM 111727	1306	Open in IMG/M
3300032954\|Ga0335083_11243804	Not Available	575	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.52%
Host-Associated	Host-Associated	5.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.19%
Aquatic	Environmental → Aquatic	12.33%
Plants	Host-Associated → Plants	5.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.82%
Freshwater	Environmental → Aquatic → Freshwater	10.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.79%
Sediment	Environmental → Aquatic → Sediment	1.37%
Peat	Environmental → Terrestrial → Peat	0.68%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.42%
Loam	Environmental → Terrestrial → Soil → Loam	22.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.05%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.37%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.37%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.68%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_104687591	3300003505	Forest Soil	RTQVAYDTVASAIAPYADAAASQVAQHLDTDVLALLRHATGITATAPP*
Ga0062388_1009684352	3300004635	Bog Forest Soil	AELPDGRIQVAYDTVASAIAPYADTAASQVAQRLDTEVLSLLHHATGIPATAAAARRSRGTP*
Ga0070680_1008545201	3300005336	Corn Rhizosphere	TVASAIAPYHDAAASEVARQLDTEVLDLLRQVTGVPSSVTPDPPGSSP*
Ga0070714_1012114631	3300005435	Agricultural Soil	VASAIAPYHDAAASEVAQQLDTEVLDLLRQVTGVPASATPDPPPSSP*
Ga0070713_1010350131	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PDGGTRVAYDTVASAIAPYHDAAASEVAQQLDTEVLDLLRQVTRVPASATP*
Ga0070711_1003900153	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RTGGHLRRQLPDGGTRVAYDTVASTIAPYHDAAATEVAERLDTEVLDLLRRTTGGPASATA*
Ga0070706_1002143782	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VAYDTVASAIAPYGDAAASLVAQRLDTEVLSLLRHATGIPATATAARRSRRTP*
Ga0070697_1005281071	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	QVAYDTVASAIAPYGDAAASQVAQRLDTEVLSLLRHATGIPAATAAHRSRATP*
Ga0070731_102646052	3300005538	Surface Soil	IQELPGGGTQVAYDTVASAIAPYADTAASQVAGRLDTDVLSLLRHATGIPATATALRRSRRTPWRRRRRP*
Ga0070733_107330412	3300005541	Surface Soil	PGGGTQVAYDTVASAIAPYADAAASQVARRLDTDVLALLHHATGIPATATAARRPRKTP*
Ga0070761_108325741	3300005591	Soil	TQVAYDTVASAIAPYGNAAASHVAQRLDTEVLALLQHATGIPAT*
Ga0070762_108892641	3300005602	Soil	SAIAPYGDAAASQVAQRLDTEVLALLHHATGSLAPATP*
Ga0070762_112443932	3300005602	Soil	VASAIAPYGDAAASQVAERLDTEVLSLLRHATGLPATATGTPASAR*
Ga0070764_102351942	3300005712	Soil	TQVAYDTVASAIAPYQNAAASQVAQRLDTEVLALLRHATGIPATA*
Ga0070764_104900371	3300005712	Soil	TQVAYDTVASAIAPYADAAASQVAQQLDTDVLILLRHATGTPPTAPP*
Ga0070764_108219452	3300005712	Soil	TRVAYDTVASAIAPYRDAAASQVAQRLDAEVLQLLHQATGTA*
Ga0066903_1039373552	3300005764	Tropical Forest Soil	SYAPVTILIQELPDGGTHVAYDSVVSEIAAYHDADAAAVAEDLDGEVLGLLRQATGAHG*
Ga0070766_102389601	3300005921	Soil	PDGGTRVAYDTVASEIAPYHDAAAAQVAERLDTEVLGLLRQVTGVPGSATA*
Ga0070766_110454361	3300005921	Soil	VAYDTVASAIAPYADAAASQVAQRLDTEVLALLRHATGIPATATP*
Ga0070717_108193392	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LPDGGTRVAYDSVTSEIAPYRDAAAAQVAEMLDAEVLGLLRQVTGVPAPGTP*
Ga0075030_1001768451	3300006162	Watersheds	AYDSVASTLAPYRDAAASQVARRLDAEVLGLLRQVTGVPASASP*
Ga0070765_1001619644	3300006176	Soil	RVAYDSVASTLAPYRDAAASQVARRLDAEVLGLLRQVTGVPASASP*
Ga0070765_1014533662	3300006176	Soil	AYDTVASAIAPYADAAASQVAQRLDTEVLALLRHATGIPATATP*
Ga0070765_1017654672	3300006176	Soil	VASAIAPYADAAASQVAQRLDTEVLRLLRHATGTPATAPS*
Ga0070765_1017766371	3300006176	Soil	VAYDTVASAIAPYADAAASQVAQRLDTEVLRLLRHATGILATATAAHRSRRAP*
Ga0075425_1005510151	3300006854	Populus Rhizosphere	TRVAYDTVASAIAPYHDAAASKVAQRLDTEVLDLLRQVTGVPASATA*
Ga0075436_1000058131	3300006914	Populus Rhizosphere	GGTRVAYDTVASAIAPYHDAAASKVAQRLDTEVLDLLRQVTGVPASATA*
Ga0099829_116878132	3300009038	Vadose Zone Soil	PGGTRVACDSVASALGPYHDAAASQVARRLDTEVLGLLRQVTGVPASASA*
Ga0114129_117405782	3300009147	Populus Rhizosphere	VAYDTVASAIALYGDAAASQVAQRLDTEVLSLLHQATGIPATATP*
Ga0075423_103749833	3300009162	Populus Rhizosphere	VAYDTVASAIAPYHDAAASKVAQRLDTEVLDLLRQVTGVPASATA*
Ga0126382_120496342	3300010047	Tropical Forest Soil	RVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR*
Ga0074045_104020262	3300010341	Bog Forest Soil	VAYDSVASAIAPYHDAAASEVAQRLDTEVLTLLREATGVPASGST*
Ga0126376_123343092	3300010359	Tropical Forest Soil	VTILIQEMPDGRTRVAYDAVASEIAPYHDAAASQVAQRLDTEVLALLREVTGAPASGAT*
Ga0126377_104419602	3300010362	Tropical Forest Soil	TILIEETPDGGTRVAYDSVVSALAPYDDAAASTVAERLDTEVLGLLRQATGVPAR*
Ga0126381_1010140971	3300010376	Tropical Forest Soil	GTQVAYDSVVSALAPYDNAAASTVAEQLDAEVLGLLREATGVPAR*
Ga0134127_104041961	3300010399	Terrestrial Soil	GTRVAYDTVASELSPYHDAAALEVAQRLDTEVLGLLRQVTGVPPSGPA*
Ga0134121_108212153	3300010401	Terrestrial Soil	MRPVTILIEELPGGGTRVAYDTVTSEIAPYGDAAASQVAERLDTEVLVLLRQATGIPAPTAS*
Ga0150983_159844981	3300011120	Forest Soil	GTRVAYDTVASAIAPYRDAAASQVAQRLDAEVLKLLHQATGTA*
Ga0137360_109741913	3300012361	Vadose Zone Soil	AYDTVASAIAPYHDAAASEVAQRLDTEVLDLLRQATGVSASATA*
Ga0126369_113109752	3300012971	Tropical Forest Soil	ILIQEMPDGRTRVAYDAVASEIAPYHDAAASQVAERLDTEVLDLLRQVTGAPASAAP*
Ga0164306_104546251	3300012988	Soil	YAPVTILIQELPDGGTRVAYDSVTSEIAPYRDAAASEVAERLDGEVLGLLRQVTGASASASP*
Ga0181531_105951461	3300014169	Bog	LIEETREGGTRVAYDSVASAIAPYHDATASEVAQRLDTEVLRLLRQLTGTTGPGPA*
Ga0157377_100361845	3300014745	Miscanthus Rhizosphere	AYDTVASAIAPYHDAAASEVARQLDTEVLDLLRQVTGVPSSVTPDPPGSSP*
Ga0157376_110206123	3300014969	Miscanthus Rhizosphere	LPGGGTRVAYDTVASELSPYHDAAALEVAQRLDTEVLGLLRQVTGVPPSGPA*
Ga0182036_111900852	3300016270	Soil	ILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAKRLDAEVLGLLREATGVPAR
Ga0182041_111719732	3300016294	Soil	VTILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGIPGPVKAGTPARGISRRRRPRPA
Ga0182035_103341792	3300016341	Soil	YAPVTILIEETPDGGTRVAYDSVVSALASYDNAAASTVAERLDAEVLGLVREATGVPAR
Ga0182034_102467171	3300016371	Soil	GGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGIPAR
Ga0182039_120710821	3300016422	Soil	IEETPDGGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR
Ga0182038_105513413	3300016445	Soil	ETPDGGTRVAYDSVVSALAPYDNAAASTVAEQLDAEVLGLLREATGVPGPVKAGTPARG
Ga0187820_10617832	3300017924	Freshwater Sediment	ELPGGRTQVAYDTVASAIAPYADAAASHVAQRLDTEVLALLRHATGIPATATP
Ga0187807_10776623	3300017926	Freshwater Sediment	PGGGTRVAYDTVTSELAPYGDAAATQVAERLDAEVLGLLHQATGLPTSHR
Ga0187807_11507651	3300017926	Freshwater Sediment	TRVAYDSVASTLAPYRDAAASQVARRLDAEVLGLLRQVTGVPASASR
Ga0187806_10192765	3300017928	Freshwater Sediment	AYDSVASTLAPYRDAAASQVARRLDAEVLGLLRQVTGVPASASR
Ga0187785_101031321	3300017947	Tropical Peatland	PDGGTRVAYDTVASEIAPYQNAAASEVAERLDTEVLGLLRQVTAMPASRSPA
Ga0187779_102703201	3300017959	Tropical Peatland	VPVTILIEQTPDGGTRVAYDSVPSQIAPYHDSAASEVAERLDTEVLGLLRQVTGAPASAT
Ga0187778_104379632	3300017961	Tropical Peatland	VAYDSVVSALAPYDNAAASTVAKQLDAEVLGLLREATGVPAR
Ga0187777_101346024	3300017974	Tropical Peatland	VAYDSVVSALAPYDNAAASTVAEQLDAEVLGLLREATGVPAR
Ga0187805_106452821	3300018007	Freshwater Sediment	GGRTQVAYDTVASAIAPYADAAASQVAQRLDTEVLSLLCHATGIPATAPPELPH
Ga0187884_104221072	3300018009	Peatland	GGGTQVAYDTVASAIAPYADAAASQVAQRLDTEVLRLLRHATDIPATAPP
Ga0187867_105166292	3300018033	Peatland	AYDTVASAIAPYENAAASQVAQRLDTEVLTLLHYATGIPATATTAWRSRATP
Ga0187875_106910362	3300018035	Peatland	YDTVASAIAPYENAAASQVAQRLDTEVLTLLHHATGIPATATTARRSRATP
Ga0187851_101868191	3300018046	Peatland	DTVASAIAPYENAAASQVAQRLDTEVLTLLHHATGIPATATTARRSRATP
Ga0187851_106418221	3300018046	Peatland	PGGTRVAYDSVASALARYHDAAASQVARRLDAEVLGLLRQVTGMPAVT
Ga0187858_105699352	3300018057	Peatland	GGTRVAYDSVASTLAPYRDAAASQVARRLDTEVLGLLRQVTGVPASASP
Ga0210407_102269643	3300020579	Soil	MAYDTVASAIAPYHDAAASEVAQQLDTEVLDLLRQVTGVPASATP
Ga0210399_100925231	3300020581	Soil	KGAPHGIRASTRMAYDTVASAIAPYHDAAASEVAQQLDTEVLDLLRQVTGVPASATP
Ga0210395_100968761	3300020582	Soil	VAYDTVASAIAPYADAAASQVAQQLYTDVLILLRHATGTPPTAPP
Ga0210408_113096652	3300021178	Soil	LAGGRTQVAYDTVASAIAPYADAAASQVAQQLDTEVLRLLRHATGIPATASGDQ
Ga0210396_101779251	3300021180	Soil	VASEIAPYRSPAASEVARRLDTEVLRLLREATGVQAPAAP
Ga0210396_116730981	3300021180	Soil	TVGGSRVAYDTVASAIAPYLDAAASQVAQRLDAEVLELLHQATGTA
Ga0210393_104930362	3300021401	Soil	GGTRVAYDSVASAIAPYRNPAASEVARRLDTEVIGLLREATGGQEPAAP
Ga0210385_110316372	3300021402	Soil	TVASAIAPYADAAASQVAKELDTEVLALLHQATGMPATATAARRPRRTP
Ga0210389_104960521	3300021404	Soil	VTTAIAPYQNAPASQVAQRLDTEVLRLLRHATGTPPTALPRSPTTS
Ga0210387_102230922	3300021405	Soil	DTVASAIAPYADAAASQVAQQLDTDVLILLRHATGTPPTAPP
Ga0210387_111983611	3300021405	Soil	ILIEEKPDSGTWVSYDSVASALAPYDDPAASKVAGRLDTEVLTLLRAVT
Ga0210386_102647403	3300021406	Soil	GGGTRVAYDTVASAIARYHDAAASQVAQRLDAEVLELLHQATGTG
Ga0210383_105704731	3300021407	Soil	DTVASAIAPYGDPPASQVAQRLDTEVLSLLHHATGMPVTATSHRSRRTC
Ga0210383_106007792	3300021407	Soil	TAASAIAPYADAAASQVAQRLDTDVLRLLRHATGIPATAPP
Ga0210384_111866312	3300021432	Soil	IQELAGGRTQVAYDTVASAIAPYADAAASQVAQQLDTEVLRLLRHATGIPATASGDQ
Ga0210390_112904311	3300021474	Soil	TVASAIAPYRDAAASQVAQRLDAEVLQLLHQATGTA
Ga0210392_105167062	3300021475	Soil	YDTVVSAIAPYGDAAASQVAQRLDTEVLSLLQHATGIPATATP
Ga0210398_112319662	3300021477	Soil	GTQVAYDTVTSAIAPYQNAAASQVAQRLDTEVLTLLRHAIGIPAKATAAHRARGTP
Ga0210402_103560172	3300021478	Soil	AYDSVASQIAPYHDAAASEVAQRLDTEVLTLLREAAGAPASGAT
Ga0210402_107001133	3300021478	Soil	MVWVFGARGDDSVASQIAPYHDAAASQVAQHLDTEVLTLLREVTGAPASGAA
Ga0210402_108983501	3300021478	Soil	GGTRVAYDTVTSEIAPYGDAAASQVAERLDTEVLGLLHQATGIPVSTAS
Ga0210410_101380001	3300021479	Soil	AIAPYADAAASQVAQHLDTDVLALLRHATGITATAPP
Ga0210409_100843817	3300021559	Soil	LEQTPGGTRVAYDSVASTLAPYRDAAASQVARRLDAEVLGLLRQVTGVPASASP
Ga0242663_11390322	3300022523	Soil	LVQETPGGTRVAYDSAASAVAPYRDTAASQVARRLDSEVLELLRQVTGMPSSARQ
Ga0242675_10432632	3300022718	Soil	VAYDTVASAIAPYRDAAASQVAERLDTEVLGLLRQVTGAPGPGPASARIFPAH
Ga0242665_102079672	3300022724	Soil	GTRVAYDSAASAVAPYRNTAASQVARRLDSEVLELLRQVTGMPSSARQ
Ga0207692_103511081	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	DGGTRVAFDTVASAIAPYHDAAASEVARQLDTEVLDLLRQVTGVPSSVTPDPPGSSP
Ga0207692_106642441	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPDGGTRVAYDTVASAIALYHDAAASEVAQQLDTEVLALLRQVAGL
Ga0207693_107816962	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TRVAYDTVASAIAPYHDAAASEVAQRLDVEVLELLRQVTGVPATATA
Ga0207663_103162453	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	HLRRQLPDGGTRVAYDTVASTIAPYHDAAATEVAERLDTEVLDLLRRTTGGPASATA
Ga0207700_117840801	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GTRVAYDTVASELSPHHDAAALEVAQRLDTEVLGLLRQVTGVPPSGPA
Ga0257146_10431202	3300026374	Soil	PGGRTQVAYDTVASAIAPYADAAASQVAQRLDTEVLSLLHHATGIPATATAARRSRRTP
Ga0208488_10096241	3300027110	Forest Soil	VVSAIAPYGDAAASQVAQRLDTEVLALLHHATGSLAPATP
Ga0208608_1085942	3300027165	Forest Soil	LIQELPHGGTRIAYDTVTSALAPYHDAAATQVAQRLDTEVLTLLRQVTGTPGPGPA
Ga0208239_10249341	3300027168	Forest Soil	DTVASAIAPYADAAASQVAQQLDTEVLRLLRHATGIPATASGDQ
Ga0209248_100222591	3300027729	Bog Forest Soil	LIQELPGGGTQVAYDTAASAIAPNGDAAASQVAQRLDTDVLSLLRHATGIPATATAAHRSRRTP
Ga0209038_100294043	3300027737	Bog Forest Soil	GGGTQVAYDTAASAIAPNGDAAASQVAQRLDTDVLSLLRHATGIPATATAAHRSRRTP
Ga0209773_101061993	3300027829	Bog Forest Soil	GRTRVAYDTVASAIAPYADAAASQVAQHLDTEVLALLRHATGIPATAPP
Ga0209180_103945321	3300027846	Vadose Zone Soil	APYGDAAASQVAQRLDTEVLSLLRHATDIPATAPP
Ga0209169_103709272	3300027879	Soil	AYDTVASAIAPYADAAASQVAQQLDTDVLTLLRHATGTPPTAPP
Ga0209068_101014183	3300027894	Watersheds	PGGTRVAYDSVASTLAPYRDAAASQVARRLDAEVLGLLRQVTGVPASASR
Ga0209624_102106411	3300027895	Forest Soil	DTAVSAIAPYGDAAASQVAQRLDTDVLSLLRHATGIPATAPP
Ga0268266_112127881	3300028379	Switchgrass Rhizosphere	DTVTSEIAPYGDAAASQVAKRLDTEVLGLLRQATGIPAPTAS
Ga0268264_111454451	3300028381	Switchgrass Rhizosphere	SYAPVTILIEELPGGGTRVAYDTVTSEIAPYGDAAASQVAKRLDTEVLVLLRQATGIPAPTAS
Ga0302219_103155572	3300028747	Palsa	YDSVASTLAPYRDAAASQVARRLDAEVLGLLRQVTGVPASATR
Ga0308309_111521152	3300028906	Soil	SAIAPYGDAAASQVAQRLDTEVLSLLHHATGIPATATP
Ga0268241_100379842	3300030511	Soil	HHPHQELPDGGTRVAYDSVASQIAPHHDAAASQVAQRLDTEVLTLLA
Ga0318534_100148895	3300031544	Soil	YAPVTILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR
Ga0318541_101680282	3300031545	Soil	IEETPDGGTRVAYDSVVSALAPYDNAAASTVAKRLDAEVLGLLREATGVPAR
Ga0318571_100980181	3300031549	Soil	GTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLRQATGVPAR
Ga0318515_102729681	3300031572	Soil	YAPVTILIQETPDGGTRVAYDSVVSALAPYDNAAASTVAGQLDAEVLGLLREATGVPGPVKTATPARG
Ga0318574_102864651	3300031680	Soil	EETPDGGTRVAYDSVVSALAPYDNAAASTVAEQLDAEVLGLLREATGIPGPVKAGTPARG
Ga0310686_1064932191	3300031708	Soil	TVASAIAPYADAAASQVAQELDTEVLALLRHATGRPATAPP
Ga0310686_1100896501	3300031708	Soil	TILIQELPGGGTRIAYDSVVSAIEGYGDPAALEVAEQLDDEVLALLRGIG
Ga0310686_1149782391	3300031708	Soil	MQEMPDGGTRVAYGTATSAIAPTHDVAASKAAQRLDTEVPGLL
Ga0307476_101972101	3300031715	Hardwood Forest Soil	QEMPDDGTRVAYDTVASAIASYHNAAASEVAERLDAEVLGLLRQVTGVPASAPA
Ga0307469_110766991	3300031720	Hardwood Forest Soil	EELPGGGTRVAYDTVTSEIAPYGDAAASQVAERLDTEVLVLPRQATGVPASTAS
Ga0306918_104771252	3300031744	Soil	GTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR
Ga0318502_104468381	3300031747	Soil	IQELPDGRTRVAYDSVCSAIAPYHDAAASQVARRLDAEVLTLLRQVSAVPASGTS
Ga0318521_107391591	3300031770	Soil	IQETPDGGTRVAYDSVVSALAPYDNAAASTVAGQLDAEVLGLLREATGVPGPVKTATPAR
Ga0318546_112154803	3300031771	Soil	APVTILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGIPAR
Ga0318552_100656582	3300031782	Soil	TILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAGRLDAEVLGLLREATGVPAR
Ga0318529_100873133	3300031792	Soil	ILIEETPDDGTRVAYDSVVSALAPYDNAAASTVAKRLDAEVLGLLREATGVPAR
Ga0318548_103981691	3300031793	Soil	IEETPDGGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGIPGPVKAGTPAR
Ga0318568_101566361	3300031819	Soil	AYDSVVSALAPYDNAAASTVAGRLDAEVLGLLREATGVPAR
Ga0318567_108993552	3300031821	Soil	TRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR
Ga0318495_101607473	3300031860	Soil	YAPVTILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAGRLDAEVLGLLREATGVPDR
Ga0318551_107615891	3300031896	Soil	DSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR
Ga0306923_116423931	3300031910	Soil	ILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREAAGVPAR
Ga0306921_107912823	3300031912	Soil	PDGGTRVAYDSVVSALARYGNAAASAVADRLDTEVLTLLREATGVMSR
Ga0310916_115534511	3300031942	Soil	TILIEETPDDGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR
Ga0310910_100604101	3300031946	Soil	EETPDDGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR
Ga0306926_103322252	3300031954	Soil	VAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR
Ga0318562_100093163	3300032008	Soil	PDGGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGVPAR
Ga0318532_100751264	3300032051	Soil	TRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGIPAR
Ga0318575_104747591	3300032055	Soil	TILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAERLDAEVLGLLREATGIPGPVKAGTPARG
Ga0318513_101660172	3300032065	Soil	ILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAGRLDAEVLGLLREATGVPAR
Ga0306924_103032231	3300032076	Soil	YAPVTILIEETPDGGTRVAYDSVVSALAPYDNAAASTVAGRLDAEVLGLLREATGVPAR
Ga0348332_142810821	3300032515	Plant Litter	VAYDTVASATVPNGDAAAAQVARRLDIEVLGLLYHATGQAPN
Ga0335074_104777732	3300032895	Soil	MGGTRVAYDSIASQIAPYRDAAASQVAQRLDTEVLTLLREVTGAPASGAA
Ga0335083_112438043	3300032954	Soil	PDGGTRVAYDSVVSALAPYDNAAASTVAEQLDAEVLGLLREATGVPAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049785

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences