Metagenome / Metatranscriptome Family F049782

Basic Information
Family ID	F049782
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	56 residues
Representative Sequence	MTDPTASRLRQLASPRRPPAAGRGARPAAALLLRLGCVALLAWIGYIHLHLW
Number of Associated Samples	120
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	96.53 %
% of genes near scaffold ends (potentially truncated)	97.26 %
% of genes from short scaffolds (< 2000 bps)	91.78 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (97.260 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.822 % of family members)
Environment Ontology (ENVO)	Unclassified (26.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.260 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1cont_0723.00001580 2JGIcombinedJ51221_102078171 3Ga0062593_1030518482 4Ga0066815_100781442 5Ga0066388_1039576901 6Ga0070661_1010431091 7Ga0070703_103289561 8Ga0070714_1023732341 9Ga0070710_102508883 10Ga0070710_106338431 11Ga0070710_113725252 12Ga0070706_1002842813 13Ga0070707_1013957801 14Ga0070698_1006535602 15Ga0070732_106703361 16Ga0070693_1001243054 17Ga0070664_1011618261 18Ga0068857_1005336101 19Ga0066706_111065952 20Ga0070762_102916211 21Ga0070763_102847081 22Ga0070763_104225421 23Ga0070763_107778352 24Ga0068859_1015272382 25Ga0070764_110878322 26Ga0066903_1016766673 27Ga0070765_1006858141 28Ga0074064_116683721 29Ga0079222_113079722 30Ga0066659_110496052 31Ga0079221_104690362 32Ga0075425_1011202521 33Ga0075434_1003941723 34Ga0075426_107882182 35Ga0079219_106158711 36Ga0079219_112184131 37Ga0075435_1011475972 38Ga0099792_109649761 39Ga0099792_109805162 40Ga0105241_118982251 41Ga0126373_101916531 42Ga0134084_102331492 43Ga0126378_109873731 44Ga0126378_114253111 45Ga0105239_114732561 46Ga0126381_1000407526 47Ga0126381_1006594701 48Ga0126381_1046956862 49Ga0126347_13435542 50Ga0137391_107879131 51Ga0137364_114450422 52Ga0137376_116472352 53Ga0137416_117134801 54Ga0137407_121543991 55Ga0164302_113037341 56Ga0126369_120649451 57Ga0163163_117298692 58Ga0182024_115453312 59Ga0157379_117698122 60Ga0182036_106557832 61Ga0182032_118501491 62Ga0182034_111026911 63Ga0193730_11380292 64Ga0193755_11140691 65Ga0210403_103393933 66Ga0210404_105010422 67Ga0210400_107489762 68Ga0210400_115857001 69Ga0210405_101784241 70Ga0210408_110298961 71Ga0210396_101373123 72Ga0210396_116504011 73Ga0210385_106938102 74Ga0210389_101915123 75Ga0210389_109724661 76Ga0210389_113554451 77Ga0210387_100730136 78Ga0210387_111464152 79Ga0210383_112759552 80Ga0210402_118365331 81Ga0210409_114134681 82Ga0126371_127028711 83Ga0212123_105525481 84Ga0247669_10755582 85Ga0247677_10173011 86Ga0207685_100077946 87Ga0207684_100665405 88Ga0207693_108104992 89Ga0207693_108110331 90Ga0207649_102160801 91Ga0207700_100480905 92Ga0207678_110574681 93Ga0207674_101136394 94Ga0257147_10465371 95Ga0209621_10026721 96Ga0208603_10543601 97Ga0208729_1006311 98Ga0209178_13374731 99Ga0209701_105001232 100Ga0308309_111970332 101Ga0307482_10900061 102Ga0265760_102637351 103Ga0318528_106652822 104Ga0318555_102540742 105Ga0318555_107287581 106Ga0318574_103761461 107Ga0318560_103629791 108Ga0307476_103680263 109Ga0307476_107853302 110Ga0307474_113337772 111Ga0306917_112778632 112Ga0306917_113499242 113Ga0318493_105857651 114Ga0306918_100744265 115Ga0306918_113704792 116Ga0318502_103285222 117Ga0307477_104155353 118Ga0307477_105232961 119Ga0318557_101578892 120Ga0318565_102823262 121Ga0318567_101972491 122Ga0318567_108834901 123Ga0307478_111678292 124Ga0306925_110657791 125Ga0306925_119454732 126Ga0318520_104390132 127Ga0306921_114861181 128Ga0310912_103707063 129Ga0310912_112055701 130Ga0307479_120336392 131Ga0306922_122184361 132Ga0318563_104339041 133Ga0318569_100118665 134Ga0318532_101622071 135Ga0318570_100500241 136Ga0318504_104469701 137Ga0318524_100034296 138Ga0318524_104982621 139Ga0318553_103197621 140Ga0318553_104340581 141Ga0310890_116041532 142Ga0306924_117844322 143Ga0307471_1029744591 144Ga0306920_1013174432 145Ga0318519_105577801 146Ga0318519_108702122
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76. 1cont_0723.00001580 2JGIcombinedJ51221_102078171 3Ga0062593_1030518482 4Ga0066815_100781442 5Ga0066388_1039576901 6Ga0070661_1010431091 7Ga0070706_1002842813 8Ga0070698_1006535602 9Ga0070693_1001243054 10Ga0066706_111065952 11Ga0066903_1016766673 12Ga0074064_116683721 13Ga0066659_110496052 14Ga0075425_1011202521 15Ga0099792_109649761 16Ga0099792_109805162 17Ga0126381_1000407526 18Ga0137391_107879131 19Ga0137364_114450422 20Ga0137376_116472352 21Ga0126369_120649451 22Ga0182024_115453312 23Ga0157379_117698122 24Ga0182036_106557832 25Ga0182032_118501491 26Ga0182034_111026911 27Ga0210400_115857001 28Ga0210405_101784241 29Ga0210396_116504011 30Ga0210389_113554451 31Ga0210387_111464152 32Ga0208729_1006311 33Ga0209701_105001232 34Ga0318528_106652822 35Ga0318555_102540742 36Ga0318574_103761461 37Ga0306917_112778632 38Ga0318493_105857651 39Ga0306918_113704792 40Ga0318565_102823262 41Ga0318563_104339041 42Ga0318570_100500241 43Ga0306924_117844322
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52 1Ga0210389_109724661 2Ga0066388_1039576901 3Ga0070714_1023732341 4Ga0070706_1002842813 5Ga0070698_1006535602 6Ga0070763_102847081 7Ga0070763_107778352 8Ga0070764_110878322 9Ga0074064_116683721 10Ga0079222_113079722 11Ga0075425_1011202521 12Ga0075426_107882182 13Ga0126381_1000407526 14Ga0126381_1006594701 15Ga0126381_1046956862 16Ga0137391_107879131 17Ga0137364_114450422 18Ga0164302_113037341 19Ga0126369_120649451 20Ga0182024_115453312 21Ga0157379_117698122 22Ga0182036_106557832 23Ga0182032_118501491 24Ga0210402_118365331 25Ga0210409_114134681 26Ga0126371_127028711 27Ga0212123_105525481 28Ga0207685_100077946 29Ga0207684_100665405 30Ga0207693_108104992 31Ga0207649_102160801 32Ga0207700_100480905 33Ga0208729_1006311 34Ga0209178_13374731 35Ga0209701_105001232 36Ga0307482_10900061 37Ga0265760_102637351 38Ga0318528_106652822 39Ga0318560_103629791 40Ga0306917_112778632 41Ga0306917_113499242 42Ga0318493_105857651 43Ga0306918_100744265 44Ga0306918_113704792 45Ga0318502_103285222 46Ga0318567_108834901 47Ga0307478_111678292 48Ga0306925_119454732 49Ga0307479_120336392 50Ga0318563_104339041 51Ga0318569_100118665 52Ga0307471_1029744591 53Ga0318519_108702122
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.00% β-sheet: 0.00% Coil/Unstructured: 55.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF03640	Lipoprotein_15	2.74
PF03704	BTAD	1.37
PF00072	Response_reg	0.68
PF13340	DUF4096	0.68
PF09924	LPG_synthase_C	0.68
PF00860	Xan_ur_permease	0.68
PF00126	HTH_1	0.68
PF13424	TPR_12	0.68
PF13411	MerR_1	0.68
PF01243	Putative_PNPOx	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	2.74
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	1.37
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	1.37

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.26 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	95.21 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	95.21 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	84.93 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.68 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	68.49 %
Unclassified	root	N/A	2.74 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.68 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	67.81 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	2.05 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.68 %
Specibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Specibacter	6.85 %
Unclassified	root	N/A	2.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.68 %
Specibacter cremeus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Specibacter → Specibacter cremeus	6.85 %
Unclassified	root	N/A	2.74 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Arthrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp.	0.68 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.68 %
Specibacter cremeus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Specibacter → Specibacter cremeus	6.85 %
Unclassified	root	N/A	2.74 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig17723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Specibacter → Specibacter cremeus	1303	Open in IMG/M
3300003505\|JGIcombinedJ51221_10207817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	794	Open in IMG/M
3300004114\|Ga0062593_103051848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300005164\|Ga0066815_10078144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	592	Open in IMG/M
3300005332\|Ga0066388_103957690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755	Open in IMG/M
3300005344\|Ga0070661_101043109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300005406\|Ga0070703_10328956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300005435\|Ga0070714_102373234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300005437\|Ga0070710_10250888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300005437\|Ga0070710_10633843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M

Showing 1 to 10 of 144 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.68%
Environmental	Environmental	89.04%
Host-Associated	Host-Associated	10.27%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	0.68%
Modeled	Engineered → Modeled	0.68%
Plants	Host-Associated → Plants	10.27%
Terrestrial	Environmental → Terrestrial	88.36%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.53%
Roots	Host-Associated → Plants → Roots	0.68%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.68%
Soil	Environmental → Terrestrial → Soil	88.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.05%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Loam	Environmental → Terrestrial → Soil → Loam	18.49%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.37%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.05%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.16%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.74%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.48%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 120 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0723.00001580	2166559005	Simulated	MTASTTARLRRLTTPPASQAPVAGRRRAATLLLRLSCAALLAWIGYIHLH
JGIcombinedJ51221_102078171	3300003505	Forest Soil	MTQPTTIWLRQLTSPRYHAAGRGSRRAAALLLRLTGTALLAWIGYIHLHLWAEG
Ga0062593_1030518482	3300004114	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYIHLHLWQEGYRHIPTNGP
Ga0066815_100781442	3300005164	Soil	MTMTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYIH
Ga0066388_1039576901	3300005332	Tropical Forest Soil	MTDAIAARLRRLASPHSRGPLGSPGRRAAALLLRLGCGALLGWIGYIHLHLWLAGYRQIPTNGPLFLVD
Ga0070661_1010431091	3300005344	Corn Rhizosphere	MTEHTASGLRRLASPRRATAAGGGGRWAAALLLRLGCVALLAWIGYIHLHLWLEGYRHIA
Ga0070703_103289561	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGGVALLAWIGYIHLHLWQEGYR
Ga0070714_1023732341	3300005435	Agricultural Soil	MTETVAFRLRQLASPRRPPATGPGAVRPVAALLRLGCVALLAWIGYIHLHLWQEGYRHIPTNGPLFLLDA
Ga0070710_102508883	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTEHTASGLRRLASPRRATAAGRGGRWAAALLLRLGCVALLAWIGYIHLHLWLEGYRHIA
Ga0070710_106338431	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTEHAASRLHGLASPRRATAPGKGGRRAAGLLLRLGCTALLAWIGYIHLHLWQEGYSHIPTNGP
Ga0070710_113725252	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGSVALLAWIGYIHLHLWQEGYR
Ga0070706_1002842813	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTEFTVYWLRRLASPGRPGPGASTAQTAVAALLRPACAALLAWIGYIHLHLWLEGYRQIP
Ga0070707_1013957801	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTEHTASGLRRLASPRRATAAGRGGRWAAALLLRLGCVALLAWIGYI
Ga0070698_1006535602	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTEPTAFRPRQLASPRRPKATGRDGRMVVALLLRLGCAALLAWIGYIHLHLWQ
Ga0070732_106703361	3300005542	Surface Soil	MTEPTAFRLRQLASPRKPTAPGRGSRRVSALLLRLGCVALLAWIGYVHLHL
Ga0070693_1001243054	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTASIASRVRRLASPPALHAQGWGARRVAALLLRLSCAALLAWIGYIHLHLWQEGY
Ga0070664_1011618261	3300005564	Corn Rhizosphere	MIEHAASRLHGLASPRRAAAPGRGGRRAAALLLRLACAALLAWIGYIHLHLWLEGYR
Ga0068857_1005336101	3300005577	Corn Rhizosphere	MTASIASRVRRLASPPALHAQGWGARRVAALLLRLSCAALLAWIGYIHLHLWQE
Ga0066706_111065952	3300005598	Soil	MTEHAASRLRRLASPHRTTAASPGARAAALLLRLGCTALLAWIGYIHLHLWLE
Ga0070762_102916211	3300005602	Soil	MTQPTALRLRQLASPRRQHPAGRTGRRAAALLLRLACAALLAWIGYIHLHLWLEGYRQIP
Ga0070763_102847081	3300005610	Soil	MTESIAFWLRRLGSPPALQAQGWGVRRVTALLLRLGCVALLAWIGYIHLHLWQEGYRQIP
Ga0070763_104225421	3300005610	Soil	MTQPTALRLRQLASPRRQHPAGRTGRRAAALLLRLACAALLAWIGYIHLHLWLEGYRQIPTDG
Ga0070763_107778352	3300005610	Soil	MTQPTALRLRQLTSPRRQHPAGRTTRRAAALLLRLACAALLAWIGYIHLHLWLEGYR
Ga0068859_1015272382	3300005617	Switchgrass Rhizosphere	MTEHTASGLRRLASPRRATAAGRGGRWAAALLLRLGCVALLAWIGYIHLHLWQEGYSHIPTNGPL
Ga0070764_110878322	3300005712	Soil	MTEPTAFRLRQLVSPRKPKAPGRGGRRVVALLLRLGCVALLAWIGYVHLHLWQEGYRQIPTNGPL
Ga0066903_1016766673	3300005764	Tropical Forest Soil	MTAPTTAWLRRITSPRPSPSGQPGRRAAALLLRLGCVALLAWIGYIHLHLWLEGYRQIPT
Ga0070765_1006858141	3300006176	Soil	MTEPTAFRLRQLVSPRKPKAPGRGGRRVVALLLRLGCVALLAWIGYVHLHLWQ
Ga0074064_116683721	3300006603	Soil	MTEPASFRLRRLVSPRSPQAPSRGGRWAAAFLLRLGCVALLAWIGYIHLHLWQEGYRQIPTDGPLFLLDA
Ga0079222_113079722	3300006755	Agricultural Soil	MTHHAASRLRRLASSHRATATSPGARAAALLLRLGCTVLLAWIGYIHLHLWLEGYRH
Ga0066659_110496052	3300006797	Soil	MDENTASELRRLASPRRATAAGRDGRWTAALLLRLGCVALLAWIGYIHLHLWLEGYRHIPANGPLFLLAPVA
Ga0079221_104690362	3300006804	Agricultural Soil	MTEHTASGLRRLASPRRTTAAGRGGRWAAVLLLRLGCVALLAWIGYIHLHLWQEGYRHIP
Ga0075425_1011202521	3300006854	Populus Rhizosphere	MTDFTASWLRRLGSPRSPAAPAPPGRRAGTLLLRLGCAALLGWIGYIHLHLWQEG
Ga0075434_1003941723	3300006871	Populus Rhizosphere	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGSVALLAWIGYIHLHLWQEGYRHIP
Ga0075426_107882182	3300006903	Populus Rhizosphere	MTGPVAFRLRQLASPRRPPPGPGAVRPAAALLLRLGSVALLAWIGYIHLHLWQEGYR
Ga0079219_106158711	3300006954	Agricultural Soil	MTGPTAFRLRQLASPRRPPPGPGALRPAAALLLLRLGCVALLAWIGYIH
Ga0079219_112184131	3300006954	Agricultural Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYIHLHLWQEGYRHI
Ga0075435_1011475972	3300007076	Populus Rhizosphere	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALMLRLGCVALLAWIGYIHLHLWQEG
Ga0099792_109649761	3300009143	Vadose Zone Soil	MTEPTAFRLRQLASPRKPKATGRGGRRVVAMLLRLGCV
Ga0099792_109805162	3300009143	Vadose Zone Soil	MTETLAFRLRQLASPRRPPATGPGAVRPVAALLRLGCVALLA
Ga0105241_118982251	3300009174	Corn Rhizosphere	MTGPTAFRLRQLASPRRPPPSPGAVRPAAALLLRLGCVALLAWI
Ga0126373_101916531	3300010048	Tropical Forest Soil	MTAPTTTIWLRRLISPHPSPPGPPVRRAAALLLRLACVALLAWIGYIHLHLWLEGYRQI
Ga0134084_102331492	3300010322	Grasslands Soil	MSMTEHTASGLRRLASPRRATAAGRGGRWAAALLLRVGCAALLAWIGYIHLHLWLE
Ga0126378_109873731	3300010361	Tropical Forest Soil	MTAPTITWLRRITSPRPSPSGLSGRRAAALLLRLACVALLAWIGYIHLHLWLEGYRQIPTDGPL
Ga0126378_114253111	3300010361	Tropical Forest Soil	MTAPTTTIWLRRLISPHPSPPGPPVRRAAALLLRLACVALLAWIGYIHLHLWLEGYRQIPTDGPL
Ga0105239_114732561	3300010375	Corn Rhizosphere	MSMTEHTASGLRRLASPRRATAAGRGGRWAAALLLRLGCVALLAWIGYIHLHLWLEGYRHIATNGPLFL
Ga0126381_1000407526	3300010376	Tropical Forest Soil	MAGPCTERLWRRASPARPPPAWPPARRAIALLLRLGCAALLGWIGYIHLH
Ga0126381_1006594701	3300010376	Tropical Forest Soil	MPDTFAVRLRRLASPRSPSPLGSPGRRTAALLLRLACLALLAWIGYIHLHLWLEGYRQIPTNGPLFL
Ga0126381_1046956862	3300010376	Tropical Forest Soil	MTDTIAARLRRLASPRRPRPLGSPSRRAAALLLRLACVALLAWIGYIHLHLWLQGYRQIPTDGP
Ga0126347_13435542	3300010867	Boreal Forest Soil	MTGPTAFRLRQLASPRRPPATGPGAVRPVAALLLRLGCVALLAWIGYIHLHLWQEGYRQI
Ga0137391_107879131	3300011270	Vadose Zone Soil	MTCFTGFRLRQLASPSRPQAAGRGGHPAVALLLRLCCVALLAWIG
Ga0137364_114450422	3300012198	Vadose Zone Soil	MTELTASRLRRLTSPPSPTTAGHRAAALLLRLGCAALLAWIGYLHLHLWLEGYSH
Ga0137376_116472352	3300012208	Vadose Zone Soil	MTMTEHTAPGLRRLASPRRPTAAGRGGRWAAALLLRLGCVALLAWIGYLHL
Ga0137416_117134801	3300012927	Vadose Zone Soil	MTEPTAFRLRQLASPRKPKATGRGGRRVVAMLLRLGCVALLAWIGYIHLHL
Ga0137407_121543991	3300012930	Vadose Zone Soil	MTMTEHTAPGLRRLASPRRPTAAGRGSRWAAALLLRLGCVALLAWIGYIHLHLWLEGYRHMPANGPLFLLDA
Ga0164302_113037341	3300012961	Soil	MTALTTTWLRRITSPHPSPSGPPGRRAAALLLRLACVALLAWIGYIHLHLWLEGYR*
Ga0126369_120649451	3300012971	Tropical Forest Soil	MTDTIAARLRRLAAPRSPGPLGSPSRQAAALLLRLGCVALLGWIGYIHLHLWLA
Ga0163163_117298692	3300014325	Switchgrass Rhizosphere	MTGPTVFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYIHLHLWQEGYR
Ga0182024_115453312	3300014501	Permafrost	MTDQRDFRLRDLASARSARLAYRSRRGAIALLLRLGCVAALAWIGYIH
Ga0157379_117698122	3300014968	Switchgrass Rhizosphere	MTEPPAFQLQQLASPRKPKATGRGGRRVVAMLLRLGCVALLAWIGYVHLHLWQEGYRQIP
Ga0182036_106557832	3300016270	Soil	MTDTITGRLGRLASPHRSTAPRRGTHRAAVLLLQLACVALLGWIGYIHLHLWLEGYRQIPTDGPLF
Ga0182032_118501491	3300016357	Soil	VRDTFAMPLRRLASPRRPSPLGSSGRRIAALLLRLACVALLGWIGYIHLHLLLEGYRQIPTD
Ga0182034_111026911	3300016371	Soil	MTNTVAARLRQFGSWRIPSQQGSPTRRAAALLLRLACVALLGWIGYIHLHLWLEG
Ga0193730_11380292	3300020002	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYI
Ga0193755_11140691	3300020004	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYIHLHLWQEGYRH
Ga0210403_103393933	3300020580	Soil	MTHHAASRRRRLASPHRATAASPGARAAALLLRLGCTVLLAWIGYIHL
Ga0210404_105010422	3300021088	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYIHLHL
Ga0210400_107489762	3300021170	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYIHLHLWQEGYRHIPTN
Ga0210400_115857001	3300021170	Soil	MTESIAFWLRRLGSPPALQAQGWGVRRVTALLLRLGCVALLAWIGYIHLHLWQEGYRQIPTDGPL
Ga0210405_101784241	3300021171	Soil	MTESTAFRLRRLASPNRPHVTGRGARRVTALVLRLGCAALL
Ga0210408_110298961	3300021178	Soil	MTEHIASRLRRLASPRRATAASPGARAAALVLRLGCTALLAWIGYIHLHLWLEGYRHIPT
Ga0210396_101373123	3300021180	Soil	MSQPTPFRLRQLVSPRKPKAPGRGGMVVALLLRLSCVALLAWIGYVHLHLWQEGYRQIPT
Ga0210396_116504011	3300021180	Soil	MTQPIPFRLRQLASPRKPKAPGRGGMVVALLLRLGCVALLAWIGY
Ga0210385_106938102	3300021402	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYIHLHLWQEGYRHIP
Ga0210389_101915123	3300021404	Soil	MTEALAFRLRQLASPRRPPATGPGAVRLAAALLRLGCVALLAWIGYI
Ga0210389_109724661	3300021404	Soil	MTDPTASRLRQLASPRRPPAAGRGARPAAALLLRLGCVALLAWIGYIHLHLW
Ga0210389_113554451	3300021404	Soil	MTEHAASRLRGLASPRRAAAPGRGGRWAAALLLRMGCTALLAWIGYI
Ga0210387_100730136	3300021405	Soil	MTESTAFRLRRLASPNRPHVTGRGARRVTALVLRLGCAALLAWIGYIHLHLWQEG
Ga0210387_111464152	3300021405	Soil	MINPMALRLRRLASPRRPEAPGRGGRPALTLLRLGCVALLAWIGYIH
Ga0210383_112759552	3300021407	Soil	MTEHAASRLRGLASPRRAAAPGRGGRWAAALLLRVGCTALLAWIGYIHLHLWL
Ga0210402_118365331	3300021478	Soil	MIKPMALRLRRLASPYRPEAPGRGGRPALTLLRLGCVALLAWIGYIHLHLWQEGYRHIPT
Ga0210409_114134681	3300021559	Soil	MTQPTTIWLHQLTSPRYHAAGWGSRRAAALLLRLTCAALLAWIGYIHLHLWAEGYRQIPTDGPLF
Ga0126371_127028711	3300021560	Tropical Forest Soil	MTTPTTTIWLRRLISLHPSPPGPPARRAAALLLRLGCVALLAWIGYIHLHLWLEGY
Ga0212123_105525481	3300022557	Iron-Sulfur Acid Spring	MTQTTALRLRRLASPRRQDTAGGTGRRAAALLLRLACTALLAWIGYIHLHLWLEGYRHIP
Ga0247669_10755582	3300024182	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWI
Ga0247677_10173011	3300024245	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLA
Ga0207685_100077946	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTEHTASGLRRLASPRRATAAGRGGRWAAALLLRLGCVALLAWIGYIHLHLWLEG
Ga0207684_100665405	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTEPIAFRLRQLASPRKPQATGRGGRMVVALLRLGCVALLA
Ga0207693_108104992	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MIEHAASRLHGLASPRRAAAPGRGGRRAAALLLRLGCTALLAWIGYIHLHLWQEG
Ga0207693_108110331	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTEHAASRLHGLASPRRATAPGKGGRRAAALLLRLGCTALLAWIGYIHLHLWQEG
Ga0207649_102160801	3300025920	Corn Rhizosphere	MTASIASRVRRLASPPALHAQGWGARRVAALLLRLSCAALLAWIGYIHLHLWQEGYRQIPTD
Ga0207700_100480905	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTASTTARLRRLTTPPASQAPVTGRRRAATLLLRLSCAALLAWIGYIHLHLWLE
Ga0207678_110574681	3300026067	Corn Rhizosphere	MTEHTASGLRRLASPRRATAAGRGGRWAAALLLRLGCVALLAWIGYIHLHLWLEGYRHIATNGPL
Ga0207674_101136394	3300026116	Corn Rhizosphere	MTASIASRVRRLASPPALHAQGWGARRVAALLLRLSCAALLAWIGYIHLHLW
Ga0257147_10465371	3300026475	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGY
Ga0209621_10026721	3300026864	Forest Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGCVALLAWIGYIHLHLWQE
Ga0208603_10543601	3300027109	Forest Soil	MTASIASWVRRLASPPALYAQGWGGRRVAALLLRLGCAALLAWIGYIHLHLWQEGYRQIP
Ga0208729_1006311	3300027166	Forest Soil	MTQTTAPRLRRLASPRRQHPPGRTGRRAAALLLRLACAALLAWIGYIHLHLWLEGYRQIPTDGP
Ga0209178_13374731	3300027725	Agricultural Soil	MTEYIASRLRRLASPRRATAASPGARAAALVLRLGCTALLGWIGYIHLHLW
Ga0209701_105001232	3300027862	Vadose Zone Soil	MTEETPSRLRQLASPRSPLARSRGRQAGALPLRLGCIALLAWIGYIHL
Ga0308309_111970332	3300028906	Soil	MTEPTAFRLRQLASPRKPKATGRGGRRVVALLLRLGCVALLAWIGYVHLHLWQ
Ga0307482_10900061	3300030730	Hardwood Forest Soil	MTASITSWVRRLASPSALYAQGWGGRRVAALLLRLGCVALLAWIGYIHLHLWQEGYRQIPTDGPLFL
Ga0265760_102637351	3300031090	Soil	MTESTAFRLRRLASPSRPYTTGWGARRVTALVLRLGCAALLAWIGYIHLHLWQEGY
Ga0318528_106652822	3300031561	Soil	MTTSIAVRLRRLAAPRPQAPGHGGRRAAALLVRLICVALLAWIGAVHLHLWLEGYRQIPTDGPL
Ga0318555_102540742	3300031640	Soil	MTEPISFRLRQLASPRRPETPVRGGRRITGLLLRLGCVALLA
Ga0318555_107287581	3300031640	Soil	MTEPISSRLRQLASPRRPETPAPGGRRAAAWLLRLSCVVLLAW
Ga0318574_103761461	3300031680	Soil	MTEPATSRLRRLAAPSRPQPLGMPGRRAAAVLLRLVCVALLAWIGYI
Ga0318560_103629791	3300031682	Soil	MTEPISFRLRQLASPRRPETPVRGGRRITGLLLRLGCVALLAWIGYIHLHLWQEGY
Ga0307476_103680263	3300031715	Hardwood Forest Soil	MTESTAFRLRRLASPSRPRTTGRGARRVTALVLRLGCAALLAWIGYIHL
Ga0307476_107853302	3300031715	Hardwood Forest Soil	MTASITSWVRRLASPSALYAQGWGGRRVAALLLRLGCAALLAWIGYIHLHLWQEGYR
Ga0307474_113337772	3300031718	Hardwood Forest Soil	MTQTTAPRLRRLASPRRQHQAGRTTRRAAALLLRLACAALLAWIGYIHLHLWLEG
Ga0306917_112778632	3300031719	Soil	MTTSIAPWLRGLASPRRSPVPAPGGRRAAALLLRLGCVGLLAWIGAVHLHLWLEGYRQIP
Ga0306917_113499242	3300031719	Soil	MTNTVAARLRQFGSWRIPSQQGSPTRRAAALLLRLACVALLGWIGYIHLHLWLEGYRQIP
Ga0318493_105857651	3300031723	Soil	MTDTIAMRLRLLASPRPHTPAGSPGRRAAVLLLRLGCVALLGWIGYIHLH
Ga0306918_100744265	3300031744	Soil	MTEFIALWLRRLASPHRPATPQTGGRRAGALALRLTCVALLAWIGTVHLHLWLEGYRQIPTDGP
Ga0306918_113704792	3300031744	Soil	MITFTARWLRRAASPRRPPAPDRGARWVAALLLRLTCVALLAWIGAVHLH
Ga0318502_103285222	3300031747	Soil	MTEPATSRLRRLAAPSRPQPLGTPGRRAAAVLLRLACVALLAWIGYIHLHLWAEGYRQ
Ga0307477_104155353	3300031753	Hardwood Forest Soil	MTQTTALRLRQLASPRRQDPAGGSRRRAAALLLRLACAALLAWIGYIHLHLWLEG
Ga0307477_105232961	3300031753	Hardwood Forest Soil	MTASITSWVRRLASPSALYAQGWGGRRVAALLLRLGCAALLAWIGYIHLHLWQEGYRQIPTDGP
Ga0318557_101578892	3300031795	Soil	MTEPISFRLRQLASPRRPETPVRGGRRITGLLLRLGCVALLAWIGYIHLHLWQEGYGQIPTNGPLFL
Ga0318565_102823262	3300031799	Soil	MTEPISFRLRQLASPRRPETPVRGGRRITGLLLRLGCVALLAWIGYIHLHLWQEGYGQI
Ga0318567_101972491	3300031821	Soil	MTEPATSRLRRLAAPSRPQPLGTPGRRAAAVLLRLACVALLAWIGYIHLHLWAEGYRQIPTDG
Ga0318567_108834901	3300031821	Soil	MADTSAGRLRRLASPRSSSPLGSPGRRPAALLLRLACVALLGWIGYLHLHLWLQGYRQIPANGPLFL
Ga0307478_111678292	3300031823	Hardwood Forest Soil	MTQPTPFRLRQLASPRKPEATGRGGMVVALLLRLGCVALLAWIGYIHLHLWQEGYRQIP
Ga0306925_110657791	3300031890	Soil	MTTSIAPWLRGLASPRRSPVPAPGGRRAAALLLRLGCVGLLAWIGAVHLHLWLEGYR
Ga0306925_119454732	3300031890	Soil	MTTYITQWLRRLASPHRPQPHGSRGRRAAALLLRLTCVALLAWIGAVHLHLWLEGYRQIPTDG
Ga0318520_104390132	3300031897	Soil	MTTSIAVRLRRLAAPRPPAPGHGGRRAAALLVRLICVALLAWIGAVHLHLWLEGYRQIP
Ga0306921_114861181	3300031912	Soil	VRDTFAVPLRRLASPRRPSPLGSAGRRIAALLLRLACVALLGWIGYIHLHLWLEGYRQIP
Ga0310912_103707063	3300031941	Soil	MTEPVTSRLRRLASPRRPQPLGPPGRRVAAVLLRLACVALLAWIGYIHLHLWAEGYRQIPTDGPLF
Ga0310912_112055701	3300031941	Soil	MTTSIAPWLRELASPRRSPVPAPGGRRAAALLLRLGCVGLLAWIGAVHLHLW
Ga0307479_120336392	3300031962	Hardwood Forest Soil	MTTSIAPRLRRLASPRRSPAPGHGGRRVALLLRLTCVGLLAWIGGVHLHLWLEGYRQIPTDGPL
Ga0306922_122184361	3300032001	Soil	MTDTITGWLHRLASPHRSTAPRRGTRRAAVLLLQLACVALLGWIGYIHLHLWLEGYRQIPTDGPL
Ga0318563_104339041	3300032009	Soil	MTEPISSRLRQLASPRRPETPAPGGRRAAAWLLRLSCVVLLAWIGYIHLHLW
Ga0318569_100118665	3300032010	Soil	MTEPVTSRLRRLASPRRPQPLGPPGRRVAAVLLRLACVALLAWIGYIHLH
Ga0318532_101622071	3300032051	Soil	MTTSIAPWLRGLASPRRSPVPAPGGRRAAALLLRLGCVGLLAWIGAVHLHLW
Ga0318570_100500241	3300032054	Soil	MTTSIVPWLRGLASPRRSPVPAPGGRRAAALLLRLGCVG
Ga0318504_104469701	3300032063	Soil	MRDTFAVPLRRLASPRRPNPLGSPGRRIAALLLRLACVALLGWIGYIHLHLWLEGYRQIPTDGP
Ga0318524_100034296	3300032067	Soil	MTTSIAVRLRRLAAPRPQAPGHGGRRAAALLVRLICVALLAWIGAVHLHLWLEGYRQIPTDGP
Ga0318524_104982621	3300032067	Soil	MTTPTITWLRRITSPHPSPSGPSGRRAAALLLRLACVALLAWIGYIHLHLWLEGYRQIPTDGPL
Ga0318553_103197621	3300032068	Soil	MTEPISSRLRQLASPRRPETPAPGGRRAAAWLLRLSCVVLLAWIGYI
Ga0318553_104340581	3300032068	Soil	MTTPTITWLRRITSPHPSPSGPSGRRAAALLLRLACVALLAWIGYINLHLWLEGYRQIPTDG
Ga0310890_116041532	3300032075	Soil	MTGPTAFRLRQLASPRRPPPGPGAVRPAAALLLRLGSVALLAWIGYIHLH
Ga0306924_117844322	3300032076	Soil	MTEPATSRLRRLASPRRPQPLSPPARRAAAMLLRLACVGLLAWIGYIHLHLWAEGYRQI
Ga0307471_1029744591	3300032180	Hardwood Forest Soil	MTEHAASGLRRLAVPRRAAATGRDGRWAAALLLRVGCVALLAWIGYIHLHLWLEGYRHIPTNGPLFLLD
Ga0306920_1013174432	3300032261	Soil	MPDTFAVRLRRLTSPCSRSRLGSPGRRTAALLLRLACVALLAWIGYIHLHLWLEGYRQIPTDGPLFL
Ga0318519_105577801	3300033290	Soil	MTTSIVPWLRGLASPRRPPVPAPGGRRAAELLLRLGCVGLLAWIGAVHLHLWLEGYR
Ga0318519_108702122	3300033290	Soil	MTQPAISRLRRLASPRRPQPLGPPARRAAAVLLRLACVALLAWIGYIHLHLW

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049782

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences