Metagenome Family F049754

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049754
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	51 residues
Representative Sequence	MVAESIWPGMFQAEAGRGNTASVRSTRDAISDTVASYAISDEQGARKNALDNRQ
Number of Associated Samples	83
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.59 %
% of genes near scaffold ends (potentially truncated)	38.36 %
% of genes from short scaffolds (< 2000 bps)	84.93 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.342 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.233 % of family members)
Environment Ontology (ENVO)	Unclassified (33.562 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.781 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.68% β-sheet: 0.00% Coil/Unstructured: 57.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF04392	ABC_sub_bind	33.56
PF02265	S1-P1_nuclease	11.64
PF13365	Trypsin_2	3.42
PF00072	Response_reg	1.37
PF08241	Methyltransf_11	1.37
PF09851	SHOCT	0.68
PF01105	EMP24_GP25L	0.68
PF02416	TatA_B_E	0.68
PF00149	Metallophos	0.68
PF14294	DUF4372	0.68
PF05638	T6SS_HCP	0.68
PF13590	DUF4136	0.68
PF07087	DUF1353	0.68
PF00067	p450	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	33.56
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.68
COG2124	Cytochrome P450	Defense mechanisms [V]	0.68
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.34 %
Unclassified	root	N/A	24.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.34 %
Unclassified	root	N/A	24.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.34 %
Unclassified	root	N/A	24.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.48 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.11 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	2.05 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.66 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	14.38 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	4.79 %
Candidatus Hydrogenedentes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	4.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.42 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.05 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.66 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	14.38 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.79 %
unclassified Candidatus Hydrogenedentes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes	4.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.05 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.68 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.66 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	13.01 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	4.11 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	4.11 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.05 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.37 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.37 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.68 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	0.68 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.68 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.66 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	13.01 %
Dermocarpellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae	4.11 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	4.11 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.05 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.37 %
Desulfobacterales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis	1.37 %
Falsiroseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Methylomagnum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum	0.68 %
Lactobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.66 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	13.01 %
Stanieria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae → Stanieria	4.11 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	4.11 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.05 %
Candidatus Desulfatibia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia	1.37 %
Falsiroseomonas bella	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas bella	0.68 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.68 %
Liquorilactobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Liquorilactobacillus	0.68 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.66 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	13.01 %
unclassified Stanieria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae → Stanieria → unclassified Stanieria	4.11 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	4.11 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.05 %
Candidatus Desulfatibia vada	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia vada	1.37 %
Liquorilactobacillus vini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Liquorilactobacillus → Liquorilactobacillus vini	0.68 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.68 %
Falsiroseomonas bella	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas bella	0.68 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.66 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	13.01 %
Stanieria sp. NIES-3757	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae → Stanieria → unclassified Stanieria → Stanieria sp. NIES-3757	4.11 %
Candidatus Hydrogenedentes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	4.11 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2.05 %
Candidatus Desulfatibia vada	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia vada	1.37 %
Liquorilactobacillus vini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Liquorilactobacillus → Liquorilactobacillus vini	0.68 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.68 %
Falsiroseomonas bella	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas bella	0.68 %
Methylomagnum ishizawai	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100944559	Not Available	619	Open in IMG/M
3300000955\|JGI1027J12803_103062629	Not Available	611	Open in IMG/M
3300000956\|JGI10216J12902_101059053	Not Available	707	Open in IMG/M
3300000956\|JGI10216J12902_105056105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2141	Open in IMG/M
3300000956\|JGI10216J12902_109455294	Not Available	503	Open in IMG/M
3300000956\|JGI10216J12902_112723188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720	Open in IMG/M
3300004268\|Ga0066398_10100152	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005167\|Ga0066672_10697550	Not Available	651	Open in IMG/M
3300005206\|Ga0068995_10127932	Not Available	538	Open in IMG/M
3300005289\|Ga0065704_10007806	All Organisms → cellular organisms → Bacteria	3727	Open in IMG/M
3300005289\|Ga0065704_10085258	All Organisms → cellular organisms → Bacteria	3240	Open in IMG/M
3300005289\|Ga0065704_10443884	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005294\|Ga0065705_10724740	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005294\|Ga0065705_11208875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae → Stanieria → unclassified Stanieria → Stanieria sp. NIES-3757	500	Open in IMG/M
3300005295\|Ga0065707_10148280	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300005332\|Ga0066388_100342815	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300005332\|Ga0066388_101425342	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300005332\|Ga0066388_102268887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	981	Open in IMG/M
3300005332\|Ga0066388_103448961	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	807	Open in IMG/M
3300005332\|Ga0066388_106432057	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005332\|Ga0066388_107344613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae → Stanieria → unclassified Stanieria → Stanieria sp. NIES-3757	553	Open in IMG/M
3300005471\|Ga0070698_101964803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae → Stanieria → unclassified Stanieria → Stanieria sp. NIES-3757	538	Open in IMG/M
3300005536\|Ga0070697_100210091	All Organisms → cellular organisms → Bacteria → Proteobacteria	1657	Open in IMG/M
3300005559\|Ga0066700_10709517	Not Available	689	Open in IMG/M
3300005713\|Ga0066905_100359410	Not Available	1166	Open in IMG/M
3300005713\|Ga0066905_101931625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300005764\|Ga0066903_101642561	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1221	Open in IMG/M
3300005764\|Ga0066903_102293683	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300005764\|Ga0066903_102784172	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300006194\|Ga0075427_10034981	Not Available	834	Open in IMG/M
3300006844\|Ga0075428_100447049	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300006844\|Ga0075428_100503447	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300006845\|Ga0075421_100027034	All Organisms → cellular organisms → Bacteria → Proteobacteria	7237	Open in IMG/M
3300006845\|Ga0075421_100557944	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300006845\|Ga0075421_101136035	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300006845\|Ga0075421_101301297	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300006846\|Ga0075430_100138656	All Organisms → cellular organisms → Bacteria → Proteobacteria	2026	Open in IMG/M
3300006847\|Ga0075431_101525131	Not Available	627	Open in IMG/M
3300006852\|Ga0075433_10492714	Not Available	1079	Open in IMG/M
3300006852\|Ga0075433_10574073	Not Available	991	Open in IMG/M
3300006852\|Ga0075433_10665222	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300006852\|Ga0075433_11574577	Not Available	567	Open in IMG/M
3300006854\|Ga0075425_100065526	All Organisms → cellular organisms → Bacteria	4082	Open in IMG/M
3300006854\|Ga0075425_101157546	Not Available	880	Open in IMG/M
3300006854\|Ga0075425_101235282	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300006904\|Ga0075424_100224245	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	1997	Open in IMG/M
3300006904\|Ga0075424_101858298	Not Available	637	Open in IMG/M
3300006969\|Ga0075419_10215291	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300006969\|Ga0075419_10855378	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300007076\|Ga0075435_101492267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300009147\|Ga0114129_10269118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2280	Open in IMG/M
3300009147\|Ga0114129_11118012	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	985	Open in IMG/M
3300009147\|Ga0114129_11687198	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300009147\|Ga0114129_13118390	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	541	Open in IMG/M
3300009157\|Ga0105092_10000309	All Organisms → cellular organisms → Bacteria	24969	Open in IMG/M
3300009157\|Ga0105092_10761571	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300009157\|Ga0105092_10976513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Falsiroseomonas → Falsiroseomonas bella	503	Open in IMG/M
3300009162\|Ga0075423_10351589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1545	Open in IMG/M
3300009162\|Ga0075423_10562400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomagnum → Methylomagnum ishizawai	1201	Open in IMG/M
3300009162\|Ga0075423_11068234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	859	Open in IMG/M
3300009610\|Ga0105340_1297727	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300009792\|Ga0126374_10134784	Not Available	1469	Open in IMG/M
3300009792\|Ga0126374_10801940	Not Available	719	Open in IMG/M
3300009817\|Ga0105062_1047695	Not Available	780	Open in IMG/M
3300010043\|Ga0126380_10997426	Not Available	705	Open in IMG/M
3300010043\|Ga0126380_11832551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae → Stanieria → unclassified Stanieria → Stanieria sp. NIES-3757	550	Open in IMG/M
3300010046\|Ga0126384_10110736	Not Available	2046	Open in IMG/M
3300010046\|Ga0126384_11135667	Not Available	718	Open in IMG/M
3300010046\|Ga0126384_12346458	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010047\|Ga0126382_11025859	Not Available	725	Open in IMG/M
3300010047\|Ga0126382_11813972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300010047\|Ga0126382_12331354	Not Available	518	Open in IMG/M
3300010358\|Ga0126370_10555004	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	982	Open in IMG/M
3300010359\|Ga0126376_10134599	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300010359\|Ga0126376_12788302	Not Available	538	Open in IMG/M
3300010360\|Ga0126372_11522371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300010361\|Ga0126378_10482401	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300010361\|Ga0126378_10657542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1161	Open in IMG/M
3300010361\|Ga0126378_11899220	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300010361\|Ga0126378_12445324	Not Available	596	Open in IMG/M
3300010362\|Ga0126377_12843549	Not Available	558	Open in IMG/M
3300010366\|Ga0126379_10506887	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300010366\|Ga0126379_12956063	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300010366\|Ga0126379_13169543	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300010366\|Ga0126379_13245607	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	545	Open in IMG/M
3300010398\|Ga0126383_10995418	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300010398\|Ga0126383_11598034	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300010398\|Ga0126383_12089585	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium	653	Open in IMG/M
3300010398\|Ga0126383_13125122	Not Available	541	Open in IMG/M
3300010999\|Ga0138505_100039309	Not Available	665	Open in IMG/M
3300012200\|Ga0137382_11111944	Not Available	564	Open in IMG/M
3300012202\|Ga0137363_11142180	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300012205\|Ga0137362_10514396	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300012206\|Ga0137380_11593757	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012208\|Ga0137376_10032052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4180	Open in IMG/M
3300012359\|Ga0137385_10423441	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1133	Open in IMG/M
3300012361\|Ga0137360_10066831	All Organisms → cellular organisms → Bacteria	2647	Open in IMG/M
3300012361\|Ga0137360_10765830	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300012532\|Ga0137373_10379327	Not Available	1103	Open in IMG/M
3300012685\|Ga0137397_10325223	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300012922\|Ga0137394_10052951	All Organisms → cellular organisms → Bacteria	3355	Open in IMG/M
3300012923\|Ga0137359_10274607	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300012923\|Ga0137359_10524337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Liquorilactobacillus → Liquorilactobacillus vini	1044	Open in IMG/M
3300012923\|Ga0137359_11678117	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300012929\|Ga0137404_10198346	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1699	Open in IMG/M
3300012929\|Ga0137404_10557053	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300012944\|Ga0137410_11234479	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	645	Open in IMG/M
3300012948\|Ga0126375_11178926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300012989\|Ga0164305_11039979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300015053\|Ga0137405_1212360	Not Available	640	Open in IMG/M
3300015245\|Ga0137409_10231153	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300015264\|Ga0137403_10233627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1756	Open in IMG/M
3300015264\|Ga0137403_11483054	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300016294\|Ga0182041_10377592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia vada	1199	Open in IMG/M
3300016319\|Ga0182033_10256318	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300016422\|Ga0182039_10302350	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300018053\|Ga0184626_10000117	All Organisms → cellular organisms → Bacteria	18951	Open in IMG/M
3300018053\|Ga0184626_10001566	All Organisms → cellular organisms → Bacteria	8074	Open in IMG/M
3300018053\|Ga0184626_10056835	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1641	Open in IMG/M
3300018072\|Ga0184635_10010087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3268	Open in IMG/M
3300018072\|Ga0184635_10200518	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300018075\|Ga0184632_10013714	All Organisms → cellular organisms → Bacteria	3413	Open in IMG/M
3300018078\|Ga0184612_10008529	All Organisms → cellular organisms → Bacteria	5158	Open in IMG/M
3300018078\|Ga0184612_10429178	Not Available	661	Open in IMG/M
3300021081\|Ga0210379_10347063	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300025905\|Ga0207685_10374125	Not Available	724	Open in IMG/M
3300027577\|Ga0209874_1034448	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1372	Open in IMG/M
3300027722\|Ga0209819_10000253	All Organisms → cellular organisms → Bacteria	15205	Open in IMG/M
3300027722\|Ga0209819_10233857	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300027874\|Ga0209465_10565798	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300027880\|Ga0209481_10039484	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2163	Open in IMG/M
3300027880\|Ga0209481_10303597	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300027909\|Ga0209382_10088137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3649	Open in IMG/M
3300031720\|Ga0307469_12239765	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031820\|Ga0307473_10425980	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300031890\|Ga0306925_10362155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1557	Open in IMG/M
3300031912\|Ga0306921_10864146	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacterales incertae sedis → Candidatus Desulfatibia → Candidatus Desulfatibia vada	1029	Open in IMG/M
3300031941\|Ga0310912_11242949	Not Available	566	Open in IMG/M
3300032180\|Ga0307471_100015756	All Organisms → cellular organisms → Bacteria	5321	Open in IMG/M
3300032180\|Ga0307471_100445929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae → Stanieria → unclassified Stanieria → Stanieria sp. NIES-3757	1432	Open in IMG/M
3300032180\|Ga0307471_100732530	Not Available	1154	Open in IMG/M
3300032180\|Ga0307471_102066607	Not Available	716	Open in IMG/M
3300032180\|Ga0307471_103104860	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300032205\|Ga0307472_100278415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Dermocarpellaceae → Stanieria → unclassified Stanieria → Stanieria sp. NIES-3757	1330	Open in IMG/M
3300032261\|Ga0306920_101666375	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300034115\|Ga0364945_0098727	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.71%
Host-Associated	Host-Associated	23.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.75%
Plants	Host-Associated → Plants	23.29%
Aquatic	Environmental → Aquatic	10.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.23%
Sediment	Environmental → Aquatic → Sediment	6.16%
Freshwater	Environmental → Aquatic → Freshwater	4.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.05%
Marine	Environmental → Aquatic → Marine	0.68%
Floodplain	Environmental → Terrestrial → Floodplain	0.68%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.23%
Loam	Environmental → Terrestrial → Soil → Loam	11.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.16%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.05%
Sand	Environmental → Terrestrial → Soil → Sand	1.37%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.05%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	2.05%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.37%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.68%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1009445591	3300000559	Soil	MWPGIFQAEAGRGTASVRSTRSVSSDIAASYAISDEEGARKMVL
JGI1027J12803_1030626291	3300000955	Soil	MAAESIWPGMFQAEARSGDTASVRSTRDAISDTVASYDISAEQGARKNALDNRQ*TAV
JGI10216J12902_1010590531	3300000956	Soil	MAAESIWPGMFQAEAGSGNRVSVRSTRDATSDTVTSYAISDEQGARKNALD
JGI10216J12902_1050561051	3300000956	Soil	MIPESIWPGMFHAEAGSGNAASVRIARDAISDTAASYAIFDEQGARKKVLDTSNEPQ*
JGI10216J12902_1094552942	3300000956	Soil	MFQAEAGRGHMATVRSTRDAIKDMAASYAISDKQGARKNALDNWQRTAVNRRV*
JGI10216J12902_1127231883	3300000956	Soil	EAGSGNAASVRSTRDATSDTVASYPISDEQGARKKVLDNQQ*
Ga0066398_101001522	3300004268	Tropical Forest Soil	MFQAEAGRGKATSVRSTKNAINGTAASYAISDEQGARKKVLDNRQ*
Ga0066672_106975501	3300005167	Soil	MAAESMWPGMFQAEAGRGNTASVRNTSDAIRDTAASYAISCEQGARKKVLDNQ
Ga0068995_101279321	3300005206	Natural And Restored Wetlands	MAAESIWPGMFQAEAGRGNTACVISTTDARSDTVASYAISDQQKAGKKVLDNRQ*
Ga0065704_100078064	3300005289	Switchgrass Rhizosphere	MMMSESMWPGMFQATAGSGNTASARSTRDAIRDTVASYAISGEEGARKKVLDNRH*
Ga0065704_100852582	3300005289	Switchgrass Rhizosphere	MAAESTWPGMFQAEAGRGNTATVRSTRDAISGTVVSYAITDEQGARKKVLDNRQ*
Ga0065704_104438842	3300005289	Switchgrass Rhizosphere	MMSESIWPGMFQAEAGRGDTASVRSTRNATSDTAASYAISDQQGARENALDNWQRTAVNRRV*
Ga0065705_107247401	3300005294	Switchgrass Rhizosphere	MIPDSMWPGMFHAEAGSGDTASARSMTDAISDTAASYAISDEQGARKKVVDNRQ*
Ga0065705_112088751	3300005294	Switchgrass Rhizosphere	MFQAEAGRGNTASVRSTRDAISDTVASYAIEDEQGARKKV
Ga0065707_101482803	3300005295	Switchgrass Rhizosphere	MMSESMWPGMFQATAGSGNTASARSTRDAIRDTVASYAISGEEGARKKVLDNRH*
Ga0066388_1003428154	3300005332	Tropical Forest Soil	MIPESIWPGMFQAEAGRGITASVKSIRDAISDTAASYAISNEQGARKNALDNGQ*
Ga0066388_1014253421	3300005332	Tropical Forest Soil	MAPESIWPGMFQAEAGRGDTTSVISTRDAIRTTVASYAISGEQWARKTLWTTGNEPQ*
Ga0066388_1022688872	3300005332	Tropical Forest Soil	FQADAGSGSATSVRSTTNTIGDTAASYAISNEQEARKNALNNWQ*
Ga0066388_1034489612	3300005332	Tropical Forest Soil	MFQAEAGSGNMARVKSTRVVISDTVASYAISAEQGARKKVLDNCQ*
Ga0066388_1064320572	3300005332	Tropical Forest Soil	MAPESIWLGMFQAKTGNGNRASVRSTRDATSDTVASYAISDEHGARKKALDNRQ*
Ga0066388_1073446132	3300005332	Tropical Forest Soil	MFQAEAGSGNRAKVRSNKDAISDTVVSYAIPNEQGARKNLLDNG*
Ga0070698_1019648031	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MFQAEAGRGNTTNDRSTREAISDMVGTYAISDERGARKNAL
Ga0070697_1002100913	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MFQAKAGRGERVSVRSTRDAINDTLASYAISDEQGARKKVLDNRQ*
Ga0066700_107095172	3300005559	Soil	MAAESMWPGMFQAEAGRGSAISVKSTRVAMSDTAASYAISDEQGARKKVLDNRQ*
Ga0066905_1003594102	3300005713	Tropical Forest Soil	MAPESIWPGMFQANAGKDVAASVSNTRDAISGTVESYAISDEQGARKNTLDNRQ*
Ga0066905_1019316251	3300005713	Tropical Forest Soil	PGIFQAKAGRGKAASVRSTENAISDMAASYAISDEQGARKKVLDN*
Ga0066903_1016425612	3300005764	Tropical Forest Soil	WPGRFQAEAGRGDTASARSTRDAIKDTVASYGIFDEQGARKNALDTGNEPQ*
Ga0066903_1022936831	3300005764	Tropical Forest Soil	MAAESIWPGMFQAEAGRGNRASARSTRKVSMDTAASYAISDEPQARKNMLDNRQ*
Ga0066903_1027841723	3300005764	Tropical Forest Soil	MILDSIWPGMFHAEAATADIASARSMRDALSATVASYAISEEQGARKKVLDNRQ*
Ga0075427_100349812	3300006194	Populus Rhizosphere	MIRSIWPGMFHAEAGRGNTASVRSIRDAIRDTAASYAISNEQGARKKVLDKRQ*
Ga0075428_1004470492	3300006844	Populus Rhizosphere	VIAAESIWAGMFHAEAGRGNTASARNTRDATRDTAASSAISSEQGARKKVLDNRQ*
Ga0075428_1005034472	3300006844	Populus Rhizosphere	MFQAKAGSGNTASARSTRDAINNTVASYAISDEQGARKNTLDNWQ*
Ga0075421_1000270346	3300006845	Populus Rhizosphere	MMPDSMWPGMFQAEAGRGNAARVRRMSNAIRDTAASYAIFDQQEARKKVLDNRQ*
Ga0075421_1005579443	3300006845	Populus Rhizosphere	IWPGMFQADAGRGNTASITSTRNTISGTVASYAISNEQEARKKVLDNRQ*
Ga0075421_1011360351	3300006845	Populus Rhizosphere	GMFHAEAGRGNTASARNTRDATRDTAASSAISSEQGARKKVLDNRQ*
Ga0075421_1013012972	3300006845	Populus Rhizosphere	MIPENIWPGIFQAEAGSGNTASVRSTRDTNRDTVDSYAISDEHGARKKVLDNRQ*
Ga0075430_1001386562	3300006846	Populus Rhizosphere	MWPGMVQAEAGSGNTASARSTRDAMSDTVASYAISDEQRARKKVLDNRQ*
Ga0075431_1015251311	3300006847	Populus Rhizosphere	WPGMFQAEAGRGNTVSARSTRDAIRDTVASYAITVEQGARKKVLDKRQ*
Ga0075433_104927143	3300006852	Populus Rhizosphere	MAAEGIWPGMFQAKAGRGKTASARRDRKDISATAASYAISDEQGARK
Ga0075433_105740732	3300006852	Populus Rhizosphere	MALPVQSIWPGMFQAEAGRGNTASVRSTREAINDTAANYAIADAQGARQNVLDKCSG*
Ga0075433_106652222	3300006852	Populus Rhizosphere	MAAESMWPGMVQAEAGNDNTASVKSTRDAISDTAASYAISDEQGARKKALDNLQ*
Ga0075433_115745771	3300006852	Populus Rhizosphere	MIPESMLTGMLQAEARRGNATNGRSTRDAIRNAPASYAISDEKGARKRCWTISNEPQ*
Ga0075425_1000655264	3300006854	Populus Rhizosphere	MVPESIWPGMFHAEAGRGNTTTVRSTRDAISVTAASYAISDEQGARKNALDNRQ*
Ga0075425_1011575463	3300006854	Populus Rhizosphere	MTPESIWPGMFQADAGRGNTARVRSARDAIRDTVASYAISDEQGARKKV
Ga0075425_1012352822	3300006854	Populus Rhizosphere	MIPESIWPGMFQAEAVTGNAASVKSIRDAISDTVASYAISDEQGARKNALDNRQ*
Ga0075424_1002242455	3300006904	Populus Rhizosphere	MAAESIWPGMFQAKAGRGNTASARSTKDAISDTVASYATSDEQGARKKVLDN
Ga0075424_1018582982	3300006904	Populus Rhizosphere	ICPGMFQAFAGSGNTTSARNTRAATNDTVASYAISNEQEARKKVLDNRQ*
Ga0075419_102152911	3300006969	Populus Rhizosphere	QAFAGRGNTASVRSARDAISDTVASYAISDEQGARKKALDNRQ*
Ga0075419_108553782	3300006969	Populus Rhizosphere	MAGMFQAKAERGNAASARSTRDTTSDTVASYAISDEQGARKKVLDSSNEPQ*
Ga0075435_1014922672	3300007076	Populus Rhizosphere	MAAESIWPGMFQAEAGRGNAASVRSTRDAIRDTVVSYAISDKQGARKKVLDNRQ*
Ga0114129_102691183	3300009147	Populus Rhizosphere	MAAESIWPGMFHAEAGSGNTASTRSTRDAISVTVASYAISGEQGARKKVLDSSNEPQ*
Ga0114129_111180122	3300009147	Populus Rhizosphere	MWPGMFQAEAGIGNTASVRRMGNAISGTAASYAISDEQGARKKVLDNRQ*
Ga0114129_116871981	3300009147	Populus Rhizosphere	FQAEAGRGNTASVRSTREAINDTAANYAIADAQGARQNVLDKCSG*
Ga0114129_131183901	3300009147	Populus Rhizosphere	MFQAEAGRGNAASVRSTRDAIRDTVVSYAISDKQGARKKVLDNRQ
Ga0105092_100003099	3300009157	Freshwater Sediment	MAPESVWPGIFQAEQGRGTASARSTRDATSATVASYAISDEEGARKNGLDNRQ*
Ga0105092_107615712	3300009157	Freshwater Sediment	MIPESMWPGMFQAEAGRGKAASVRSTRDATRDTAASYAISDEQGARKKVLDNRQ*
Ga0105092_109765131	3300009157	Freshwater Sediment	MAAESIWPGMFQAEAGRGNTARVTSTREAISNTAVSYAISDEQGARKNVLD
Ga0075423_103515892	3300009162	Populus Rhizosphere	MWPGMFHAEAGRGNTASVRTTRDMISDTVASYAISDEQGARKKVLDNRQSIRLSKTA*
Ga0075423_105624002	3300009162	Populus Rhizosphere	MFQAKAGSGNTASARSTRDAINNTVASYAISDEQGARKN
Ga0075423_110682342	3300009162	Populus Rhizosphere	MFQAEAVTGNAASVKSIRDAISDTVASYAISDEQGARKNALDNRQ*
Ga0105340_12977271	3300009610	Soil	MFQAEAGRGSAASARRTREAINDTDARYAISDEHRARKRFWTTGDE*
Ga0126374_101347842	3300009792	Tropical Forest Soil	MAPESIWPGMFRAEVGRGIIASVRSTRDAIKDMVASYAIANEQGTRKKVLDNGQ*
Ga0126374_108019402	3300009792	Tropical Forest Soil	MFQAEAGRGDTTSVRTTRNIVSDTPASYAISDEPQARKKVLDNRQRTAVKRGRFNKLK*
Ga0105062_10476952	3300009817	Groundwater Sand	MAPESIWPGIFQANAGRGNTANARSTRDAISDTAASYAISDEDGARKNA
Ga0126380_109974261	3300010043	Tropical Forest Soil	MAPESIWPGMFQAEVGRGIIASVRSTRDAIKDMVASYAIANEQGTRKKVLDNGQ*
Ga0126380_118325512	3300010043	Tropical Forest Soil	MWPGMFQAQAGSDNTASVRKTRNAIRGTVVSYATYDESGARKKVLDNWQ*
Ga0126384_101107364	3300010046	Tropical Forest Soil	MWPGMFQAEAGRGITASVSSTRSVSSDMPATYAISDEQGARKKVLDNRQ*
Ga0126384_111356672	3300010046	Tropical Forest Soil	MAGGMFQAEAGRGNRAKVRSNKDAISDTVTSFAIYDAVAARKMVLDNRQ*
Ga0126384_123464581	3300010046	Tropical Forest Soil	MWPGMFQADAGRGNTASVKSTANAISDTIASYAIPNEQRARKKVLDNRQ*
Ga0126382_110258591	3300010047	Tropical Forest Soil	DSMWPGIFQAEAGRGNAASARSTKDAISDTAVSYAISDEQGARKNVLDNGQ*
Ga0126382_118139721	3300010047	Tropical Forest Soil	GSGNTAKVRSNKDAISDTVVSYAIPNEQRARRNLLDNRQ*
Ga0126382_123313542	3300010047	Tropical Forest Soil	MFQAEAGNGNTAIVRSTSDAISDTAKSYAISDKQGARKKVLDNR*
Ga0126370_105550041	3300010358	Tropical Forest Soil	AGRGNTASVKSTANAISDTIASYAIPDEQGARKNALDNRQ*
Ga0126376_101345991	3300010359	Tropical Forest Soil	MAPESIWPGMFQAKVGRGIIASVRSTRDAIKDMVASYAIANEQGTRKKVLDNGQ*
Ga0126376_127883022	3300010359	Tropical Forest Soil	NTASMRATKDATRAMVASHVTSDKQGARKNALDNRQ*
Ga0126372_115223711	3300010360	Tropical Forest Soil	MAPDSIWPGMFHAEAGRGNAASVRSIKDAISDTAVSYAISDEPQARKRFWTTDNEPQ*
Ga0126378_104824014	3300010361	Tropical Forest Soil	AGGMFQAEAGRGNRAKVRSNKDAISDTVTSFAISDAVAARKMVLDNRQ*
Ga0126378_106575422	3300010361	Tropical Forest Soil	MWPGMFQAEAGRGNTARVRSTTDAISGTVASYAISDEQGARKKVLDNRQ*
Ga0126378_118992202	3300010361	Tropical Forest Soil	MAPESIRPEMFQAEAGRGKATSVRSTKNAINGTAASYAISDEQGARKKVLDNRQ*
Ga0126378_124453241	3300010361	Tropical Forest Soil	PESIWPGMFQAEVGRGIIASVRSTRDAIKDMVASYAIANEQGTRKKVLDNGQ*
Ga0126377_128435492	3300010362	Tropical Forest Soil	MAPESIWLGMFQAKTGNGNRASVRSTRDATSDTVASYAISDEHGAR
Ga0126379_105068872	3300010366	Tropical Forest Soil	QDLIGDGHTEPWPGMFQAEAGRGDTASVRSTRDALSNTVATYDISDKQGARKNALDNRQ*
Ga0126379_129560631	3300010366	Tropical Forest Soil	ELWPEMFQAEAGRGDTASVRNTRDASSGTPATYSISDEPQARKNMLDNRQ*
Ga0126379_131695431	3300010366	Tropical Forest Soil	IWPEMFHAEAGRGNTASVRSTRKTINDMVASYATYDEDGARQNVLDNLQLTAK*
Ga0126379_132456072	3300010366	Tropical Forest Soil	MFQAKAGRGNTASARSTSNTINDTVASYAIFDEKGARKKVLDNWQEPL*
Ga0126383_109954182	3300010398	Tropical Forest Soil	MAPESIWPGMFQAEVGMGIIASVRSTRDAIKDTVASYAIANEQGTRKKVLDNGAMNGSKQAGH*
Ga0126383_115980342	3300010398	Tropical Forest Soil	MFQAEAGRGKATSVRSTKNAINGTAASYAISDEQGARKKVLDNR
Ga0126383_120895852	3300010398	Tropical Forest Soil	MATESIWPGMFQAEAERGNTAVVVTSTRNAIRDTVASYAITDEQVARKSRWTTGNEPK
Ga0126383_131251222	3300010398	Tropical Forest Soil	MMAAESIWPRMFQAEAGRGNTTSVRTTRNAISDTVAITDEQGARKNALDNEQ*
Ga0138505_1000393091	3300010999	Soil	MVAESIWPGMFQAEAERGNTASARSTRDAISDTVASYAISDEQGARKKVLDNRQ*
Ga0137382_111119441	3300012200	Vadose Zone Soil	MAAESMWPGMFQAEAGRGNTASVRNTRDAIRDTAASYAISCEQRARKKVLDNQQ*
Ga0137363_111421802	3300012202	Vadose Zone Soil	MFDAEAGKGNTTSVISTRDAIRDTVASYAISDEQGARKKVLDNRQ*
Ga0137362_105143962	3300012205	Vadose Zone Soil	MAAESIWPGMFQAEAVRGDKARVISTRDAISDTVASYAISDEQGARKNALDNRQ*
Ga0137380_115937572	3300012206	Vadose Zone Soil	MAAESIWPGMFQAQTGTGNAASVRSTRDAISDTVASYAISDEQEARKKVLDNRQ*
Ga0137376_100320527	3300012208	Vadose Zone Soil	MAAESMWPGMFQAEAGRSNTASVRNTRDAIRDTAASYAISCEQGARKKVLDNQQ*
Ga0137385_104234413	3300012359	Vadose Zone Soil	MWPGMFQAKAGSGNTASARSTKDAISDTVASYAISDEQGARKKVLDNRQ*
Ga0137360_100668314	3300012361	Vadose Zone Soil	MVAESIWSGMFHAEEGRGNTASARSTRDAISDTAASYAISEEQGARKRSWTTGNEQQ*
Ga0137360_107658303	3300012361	Vadose Zone Soil	MAAESIWPGMFQAFAGRDNTATARSTRDAISDTVASYAISDEQGARKKVLDN*
Ga0137373_103793271	3300012532	Vadose Zone Soil	VIAAESIWLGMFHAEAGRGNTASVRSTRDTITGTVASYAISVEQGARKKRS
Ga0137397_103252232	3300012685	Vadose Zone Soil	MVAESIWPGMFQAEAGRGDAASARSTRHAISDTVASYAISDEQGARKKVLDNRQ*
Ga0137394_100529512	3300012922	Vadose Zone Soil	MVGGFSKDLKAMAAESIWPGMFQAKAGRGKTASARRDRKDISATAASYAISDEQGGKEKVLDNRQ*
Ga0137359_102746073	3300012923	Vadose Zone Soil	MWPGMFQAEAGRGNTANDRSTRDAISDMAASYAISDEHGARKKVLDNRQ*
Ga0137359_105243371	3300012923	Vadose Zone Soil	MAAESIWPGMFQAFAGRDNTATARSTRDAISDTVASYAISDNVGARKKLLTFGTVEQN
Ga0137359_116781172	3300012923	Vadose Zone Soil	MPAESIWPGMFHAEAGKGNTTSVISTRDAIRDTVASYAISDEQGARKKVLDNRQ*
Ga0137404_101983464	3300012929	Vadose Zone Soil	WPGMFQAEAGRGNTASVRRTTDAIGDTAASYALSYEQRARKNALDNRR*
Ga0137404_105570531	3300012929	Vadose Zone Soil	AEAGSGNTASVRNIRDATSDTVASYAISDEQGARKNALDNRQ*
Ga0137410_112344792	3300012944	Vadose Zone Soil	MFHAKAGRGKAASAKSTSDAISDTVASYAISDEQGARKKVLDNRQ*
Ga0126375_111789262	3300012948	Tropical Forest Soil	QAEAGRGKATSVRSTKNAINGTAASYAISDEQGARKKVLDNRQ*
Ga0164305_110399791	3300012989	Soil	MFHAEAGRGNAASVRSTRDAISDTVATYAISDEQGARKR
Ga0137405_12123601	3300015053	Vadose Zone Soil	VVAAESCGLAMFQAETRRGNTTIVTSTREAISNTVASYAISDQQRARKKVLDNQQ*
Ga0137409_102311532	3300015245	Vadose Zone Soil	MAAESMWPGMFQAEAGRGNAVSVISTTDAINDTVASYAISDEQGARKKGFWTTANEPQ*
Ga0137403_102336274	3300015264	Vadose Zone Soil	ESIWPGMFHAEAGRGNTASVRRTTDAIGDTAASYALSYEQRARKNALDNRR*
Ga0137403_114830542	3300015264	Vadose Zone Soil	MWPGMFQAEAGSGNTASVRNIRDATSDTVASYAISDEQGARKNALDNRQ*
Ga0182041_103775921	3300016294	Soil	MAAESMWPGMFQAEAERRKTASDRSRRHTIRDTVASYAISDEQRARKKALDNR
Ga0182033_102563184	3300016319	Soil	MAAESIWPGMFHAEAGRGNTTSVRRNRDAISDTVASYAISDEQGARK
Ga0182039_103023502	3300016422	Soil	MAAESMWPGMFQAEAERRKTASDRSRRHTIRDSVASYAISDEQGAR
Ga0184626_1000011726	3300018053	Groundwater Sediment	MWPDMFQAKAGSGSTASVRSIRDATSDTVASYAISDEQGARKNALDNRQ
Ga0184626_100015666	3300018053	Groundwater Sediment	MIPESIWPGMFQAEAGSGNTARVRSTRDKIRDTVASYVISDERRARKKVLDNQQ
Ga0184626_100568354	3300018053	Groundwater Sediment	MLLGMFQAEAGSSNTLSVRSTRDATSDTVASYAISDEQGARKNALDNRQ
Ga0184635_100100874	3300018072	Groundwater Sediment	MIPESIWPGMFQAKAGSGNTAIVRRTRDAISDTGASYAISDEQGARKNALDNRQ
Ga0184635_102005182	3300018072	Groundwater Sediment	EEGGGNTASVRSARDAISDTVASYAISDEQGARKNALDNRQ
Ga0184632_100137146	3300018075	Groundwater Sediment	MAADSMWPDMFQAKAGSGSTASVRSIRDATSDTVASYAISDEQGARKNALDNRQ
Ga0184612_100085292	3300018078	Groundwater Sediment	MVAESIWPGMFQAEAGRGNTASVRSTRDAISDTVASYAISDEQGARKNALDNRQ
Ga0184612_104291782	3300018078	Groundwater Sediment	MFQADAGSGDTASARSTRDAINDTVASYAISDEQGQEKKVLDNRR
Ga0210379_103470631	3300021081	Groundwater Sediment	VMAADSMWPGMFQAKAGSGNTASVRSTRDALTNTVATYAISGEQGARKNALDN
Ga0207685_103741253	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAAKSIWLGMFQAEAGTGNTANVRSTREAISDTVASYAISDEQG
Ga0209874_10344483	3300027577	Groundwater Sand	MAPESIWPGIFQANAGRGNTANARSTRDAISDTAASYAISDEDGARKNALDNRQ
Ga0209819_100002533	3300027722	Freshwater Sediment	MAPESVWPGIFQAEQGRGTASARSTRDATSATVASYAISDEEGARKNGLDNRQ
Ga0209819_102338572	3300027722	Freshwater Sediment	MIPESMWPGMFQAEAGRGKAASVRSTRDATRDTAASYAISDEQGARKKVLDNRQ
Ga0209465_105657982	3300027874	Tropical Forest Soil	IAPDSMWPGMFQADAGSGSATSVRSTTNTIGDTAASYAISNEQEARKNALDNWQ
Ga0209481_100394841	3300027880	Populus Rhizosphere	MAADSMWPGMFQAKAGRGNTASVRSARDATSATVASYAISDEQGARKNTLDNRR
Ga0209481_103035972	3300027880	Populus Rhizosphere	MAADSMWPGMFQAEAGRGNAARVRRMSNAIRDTAASYAIFDQQEARKKVLDNRQ
Ga0209382_100881375	3300027909	Populus Rhizosphere	MMPDSMWPGMFQAEAGRGNAARVRRMSNAIRDTAASYAIFDQQEARKKVLDNRQ
Ga0307469_122397652	3300031720	Hardwood Forest Soil	MIPDSIWLGIFQAEAGNGNTASARITRDATSDTVASYAISDQHGARKKVLDNRQ
Ga0307473_104259802	3300031820	Hardwood Forest Soil	MAAESMWPGMFQAEAGGGNTANVRSTSDVISDTVASYAISDEQGARKKVLDNRQ
Ga0306925_103621552	3300031890	Soil	MAAESMWPGMFQAEAERRKTASDRSRRHTIRDSVASYAISDEQGARKKALDNR
Ga0306921_108641462	3300031912	Soil	MAAESMWPGMFQAEAERRKTASDRSRRYTIRDTVASYAISDEQRARKKALD
Ga0310912_112429491	3300031941	Soil	MAAESMWPGMFQAEAERRKTASDRSRRHTIRDTVASYAISDEQGARKKALDNR
Ga0307471_10001575610	3300032180	Hardwood Forest Soil	MFQAKAGSGNTASARSTRDAINNTVASYAISDEQGARKNTLDNWQ
Ga0307471_1004459294	3300032180	Hardwood Forest Soil	MFQAEAGRGNTARVKSTTDAISDTVASYAISDEQGARKNALDNRQ
Ga0307471_1007325301	3300032180	Hardwood Forest Soil	MAAESIWPGMFQAKAGRGKTASARRDRKDISATAASYAISDEEGGKEKVLDNRQ
Ga0307471_1020666073	3300032180	Hardwood Forest Soil	PDSIWPGMFQAEAGRGNTASVSTRAAIRDTVATYAISGEQEARKKVLDNRQRTARKRQ
Ga0307471_1031048601	3300032180	Hardwood Forest Soil	MAAESIWPGMFQAEAGMGNTANNRGTKDATSDTVASYAISNEQRGNENALDNRQ
Ga0307472_1002784154	3300032205	Hardwood Forest Soil	MFQAEAGRGNTARVKSTTDAISDTVASYAISDEQGARKNALDNR
Ga0306920_1016663752	3300032261	Soil	MAAESIWPGMFHAEAGRGNTTSVRRNRDAISDTVASYAISDEQGARKKVLDNRQ
Ga0364945_0098727_627_791	3300034115	Sediment	MAAETIWPGMFQAEAGRGNTASVRSTREAIRDTVASYAISDEHGVRKNALDNRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049754

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences