Metagenome / Metatranscriptome Family F049712

Basic Information
Family ID	F049712
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	39 residues
Representative Sequence	MKAAVRQQLDPTIRSNDTRDFHTSLRAKIVGQEEGVQ
Number of Associated Samples	127
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.63 %
% of genes near scaffold ends (potentially truncated)	96.58 %
% of genes from short scaffolds (< 2000 bps)	89.04 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Bacteria (90.411 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.657 % of family members)
Environment Ontology (ENVO)	Unclassified (28.767 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.315 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.08% β-sheet: 0.00% Coil/Unstructured: 76.92%
Feature Viewer

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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF10431	ClpB_D2-small	36.99
PF02954	HTH_8	4.11
PF07724	AAA_2	1.37
PF01035	DNA_binding_1	1.37
PF13493	DUF4118	1.37
PF13545	HTH_Crp_2	0.68
PF01063	Aminotran_4	0.68
PF00873	ACR_tran	0.68
PF13231	PMT_2	0.68
PF00437	T2SSE	0.68
PF13732	DUF4162	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.37
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	1.37
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	1.37

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.41 %
Unclassified	root	N/A	9.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.41 %
Unclassified	root	N/A	9.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.41 %
Unclassified	root	N/A	9.59 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.33 %
Unclassified	root	N/A	9.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.64 %
Unclassified	root	N/A	9.59 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.74 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.38 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	11.64 %
Unclassified	root	N/A	9.59 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.74 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	1.37 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.38 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	11.64 %
Unclassified	root	N/A	9.59 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.74 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	1.37 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.38 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	11.64 %
Unclassified	root	N/A	9.59 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.37 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	1.37 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.38 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	11.64 %
Unclassified	root	N/A	9.59 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.37 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	1.37 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.38 %
Pseudomonas sp. FW306-2-11AA	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	11.64 %
Unclassified	root	N/A	9.59 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.37 %
Acidobacteria bacterium 13_1_20CM_4_57_11	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	1.37 %
Kribbella pittospori	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_101974565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300004080\|Ga0062385_10597154	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300004633\|Ga0066395_10383255	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	788	Open in IMG/M
3300004635\|Ga0062388_101789432	Not Available	630	Open in IMG/M
3300005167\|Ga0066672_10042762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2558	Open in IMG/M
3300005440\|Ga0070705_101863791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300005538\|Ga0070731_10023220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4264	Open in IMG/M
3300005556\|Ga0066707_10130512	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300005559\|Ga0066700_10754739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	660	Open in IMG/M
3300005561\|Ga0066699_10814403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300005566\|Ga0066693_10023878	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300005566\|Ga0066693_10209558	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300005598\|Ga0066706_10021908	All Organisms → cellular organisms → Bacteria	3901	Open in IMG/M
3300005607\|Ga0070740_10221831	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005841\|Ga0068863_101269146	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300006237\|Ga0097621_102292469	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300006800\|Ga0066660_10901911	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300006804\|Ga0079221_10192306	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300006806\|Ga0079220_11870200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	531	Open in IMG/M
3300006893\|Ga0073928_10165103	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300006893\|Ga0073928_10959210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300007076\|Ga0075435_100762077	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300007265\|Ga0099794_10775828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300009038\|Ga0099829_10112452	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300009553\|Ga0105249_11217940	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300009624\|Ga0116105_1085401	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300009641\|Ga0116120_1016636	All Organisms → cellular organisms → Bacteria	2751	Open in IMG/M
3300010048\|Ga0126373_10196448	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300010048\|Ga0126373_11974709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella pittospori	646	Open in IMG/M
3300010343\|Ga0074044_10716905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300010361\|Ga0126378_11204970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	855	Open in IMG/M
3300010361\|Ga0126378_12788480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300010398\|Ga0126383_12042436	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300010400\|Ga0134122_11830165	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300011269\|Ga0137392_11217180	Not Available	611	Open in IMG/M
3300011270\|Ga0137391_11319275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	568	Open in IMG/M
3300011271\|Ga0137393_11244860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012096\|Ga0137389_11331864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300012202\|Ga0137363_10248758	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300012203\|Ga0137399_10723516	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300012361\|Ga0137360_10195264	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300012362\|Ga0137361_11940875	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300012683\|Ga0137398_10584321	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300012685\|Ga0137397_10608527	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012685\|Ga0137397_10690847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	758	Open in IMG/M
3300012685\|Ga0137397_11293043	Not Available	519	Open in IMG/M
3300012685\|Ga0137397_11359432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	501	Open in IMG/M
3300012918\|Ga0137396_10982489	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300012923\|Ga0137359_10166953	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300012923\|Ga0137359_10397354	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300012925\|Ga0137419_10273497	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300012927\|Ga0137416_10280485	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300012929\|Ga0137404_10234860	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300012944\|Ga0137410_10136778	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300012944\|Ga0137410_11189425	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300012944\|Ga0137410_11736299	Not Available	550	Open in IMG/M
3300013503\|Ga0120127_10043487	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300013503\|Ga0120127_10113117	Not Available	619	Open in IMG/M
3300014153\|Ga0181527_1257608	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300015193\|Ga0167668_1051646	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300015241\|Ga0137418_11211799	Not Available	530	Open in IMG/M
3300015245\|Ga0137409_11499826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	522	Open in IMG/M
3300016270\|Ga0182036_11157382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300016294\|Ga0182041_11879351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300016387\|Ga0182040_10565892	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300016445\|Ga0182038_11809129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300017934\|Ga0187803_10107057	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300017966\|Ga0187776_10106876	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300017970\|Ga0187783_11321141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300017973\|Ga0187780_11395329	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300017994\|Ga0187822_10314543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	556	Open in IMG/M
3300018001\|Ga0187815_10130570	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300018019\|Ga0187874_10259044	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300018060\|Ga0187765_10158460	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300018431\|Ga0066655_10742100	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300018433\|Ga0066667_11446379	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300019268\|Ga0181514_1031522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	534	Open in IMG/M
3300019888\|Ga0193751_1008415	All Organisms → cellular organisms → Bacteria → Acidobacteria	5550	Open in IMG/M
3300019890\|Ga0193728_1023608	All Organisms → cellular organisms → Bacteria	3072	Open in IMG/M
3300020579\|Ga0210407_10002473	All Organisms → cellular organisms → Bacteria	15822	Open in IMG/M
3300020579\|Ga0210407_10036659	All Organisms → cellular organisms → Bacteria → Acidobacteria	3648	Open in IMG/M
3300020579\|Ga0210407_11195076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300020580\|Ga0210403_10248398	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300020582\|Ga0210395_11396458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	511	Open in IMG/M
3300020583\|Ga0210401_10178713	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300021046\|Ga0215015_10006271	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300021086\|Ga0179596_10450353	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300021168\|Ga0210406_10854923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	688	Open in IMG/M
3300021170\|Ga0210400_10087617	All Organisms → cellular organisms → Bacteria	2453	Open in IMG/M
3300021405\|Ga0210387_11233069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	648	Open in IMG/M
3300021432\|Ga0210384_11086330	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300021479\|Ga0210410_10330070	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300021559\|Ga0210409_10159995	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300021560\|Ga0126371_10836695	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300021560\|Ga0126371_12188470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300024222\|Ga0247691_1041487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	698	Open in IMG/M
3300024288\|Ga0179589_10104749	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300024330\|Ga0137417_1033739	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300024330\|Ga0137417_1430755	All Organisms → cellular organisms → Bacteria	8797	Open in IMG/M
3300025898\|Ga0207692_10380093	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300025929\|Ga0207664_11587473	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300025939\|Ga0207665_10413123	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300026222\|Ga0209862_1056700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	693	Open in IMG/M
3300026285\|Ga0209438_1027598	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300026297\|Ga0209237_1224501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300026301\|Ga0209238_1210327	Not Available	571	Open in IMG/M
3300026301\|Ga0209238_1211856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300026317\|Ga0209154_1119045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_57_11	1117	Open in IMG/M
3300026475\|Ga0257147_1075827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300026551\|Ga0209648_10699102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	554	Open in IMG/M
3300027035\|Ga0207776_1025648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300027313\|Ga0207780_1064518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	620	Open in IMG/M
3300027376\|Ga0209004_1094713	Not Available	506	Open in IMG/M
3300027643\|Ga0209076_1125715	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300027643\|Ga0209076_1181123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300027671\|Ga0209588_1085169	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300027674\|Ga0209118_1099291	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300027678\|Ga0209011_1002120	All Organisms → cellular organisms → Bacteria → Acidobacteria	7040	Open in IMG/M
3300027701\|Ga0209447_10180128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	579	Open in IMG/M
3300027737\|Ga0209038_10058043	Not Available	1159	Open in IMG/M
3300027738\|Ga0208989_10278671	Not Available	539	Open in IMG/M
3300027857\|Ga0209166_10425289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	687	Open in IMG/M
3300027875\|Ga0209283_10415962	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300027875\|Ga0209283_10651541	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300027898\|Ga0209067_10557380	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	655	Open in IMG/M
3300028536\|Ga0137415_10448460	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300031543\|Ga0318516_10180260	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300031573\|Ga0310915_10404599	Not Available	969	Open in IMG/M
3300031715\|Ga0307476_11314580	Not Available	527	Open in IMG/M
3300031736\|Ga0318501_10158695	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1168	Open in IMG/M
3300031754\|Ga0307475_10675779	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300031879\|Ga0306919_10366376	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300031912\|Ga0306921_10385551	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300031942\|Ga0310916_10374534	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300031954\|Ga0306926_12613191	Not Available	551	Open in IMG/M
3300031962\|Ga0307479_10023261	All Organisms → cellular organisms → Bacteria → Acidobacteria	5866	Open in IMG/M
3300031962\|Ga0307479_10060604	All Organisms → cellular organisms → Bacteria → Acidobacteria	3647	Open in IMG/M
3300032076\|Ga0306924_10301382	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300032174\|Ga0307470_10573627	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300032205\|Ga0307472_101000424	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300032893\|Ga0335069_10358612	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300032954\|Ga0335083_11432909	Not Available	527	Open in IMG/M
3300033402\|Ga0326728_11087744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. FW306-2-11AA	543	Open in IMG/M
3300033405\|Ga0326727_10600044	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300033805\|Ga0314864_0181678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300033808\|Ga0314867_006258	All Organisms → cellular organisms → Bacteria	2780	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.26%
Host-Associated	Host-Associated	2.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.99%
Aquatic	Environmental → Aquatic	10.27%
Plants	Host-Associated → Plants	2.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.62%
Freshwater	Environmental → Aquatic → Freshwater	8.22%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.37%
Peat	Environmental → Terrestrial → Peat	1.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.37%
Sediment	Environmental → Aquatic → Sediment	0.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%
Roots	Host-Associated → Plants → Roots	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.23%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.22%
Loam	Environmental → Terrestrial → Soil → Loam	7.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.05%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.37%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.37%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.37%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.37%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.11%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.05%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.37%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.37%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.37%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.37%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.37%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.37%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.68%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026222	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049712

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1019745652	3300000955	Soil	MRPAVRQQLNPSIRSNDTRDFEGALRSKIVGQEEGVQAL
Ga0062385_105971541	3300004080	Bog Forest Soil	MKAGARQQLDPTIRSTDTRDFEGALRSKIVGQAEGVQALV
Ga0066395_103832553	3300004633	Tropical Forest Soil	MRAAARHQLDPSIRSTDTRDFESSLRAKIVGQAEGIQALVDMYQVFCAGLNS
Ga0062388_1017894321	3300004635	Bog Forest Soil	MKAAVRQQLDPTIRSIDTRDFESSLRAKVVGQAEGVQALVDMYQVF
Ga0066672_100427622	3300005167	Soil	MTAAVRHQLDPSIRSNDTRDFHASLRAKIVGQEEGIQSLVAMY*
Ga0070705_1018637912	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRPAVRQQLNPSIRSNDTRDFEGSLRSKIVGQEEGVQALVDL
Ga0070731_100232201	3300005538	Surface Soil	MRPAVRQQLNPSIRSNDTRDFEGALRSKIVGQEEGVQALVD
Ga0066707_101305122	3300005556	Soil	MKAAVRHQLDPTIRSNDTCDFESSLRAKIVGQEEGVQSL
Ga0066700_107547391	3300005559	Soil	MKAAVRHQLDPTIRSNDTCDFHASLRAKIVGQEEGVQS
Ga0066699_108144032	3300005561	Soil	MRAAVRHQLDPSIRSNDTRDFHASLRAKIVGQEEGIQSLV
Ga0066693_100238781	3300005566	Soil	MRTAARHQLDPTIRSSDTRDFHGSLRAKIVGQEEGVQALV
Ga0066693_102095581	3300005566	Soil	MRPAVRQQLNPSIRSNETRDFEGSLRSKIVGQQEGVQALVDLY
Ga0066706_100219086	3300005598	Soil	MKPAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGVQSL
Ga0070740_102218312	3300005607	Surface Soil	MRSAARQQLDPTIRSTGTRDFETSLRSKIVGQEEGVQALV
Ga0068863_1012691462	3300005841	Switchgrass Rhizosphere	MRAAVRQQLDPTIRSNDTRDFHGSLRAKIVGQEEG
Ga0097621_1022924691	3300006237	Miscanthus Rhizosphere	MRPAVRQQLDPSIRSDDTRAFDQALRVKIVGQEEGVQALV
Ga0066660_109019112	3300006800	Soil	MKAAVRHQLDPTIRSTDTRDFQGSLRAKIVGQEEGVQALV
Ga0079221_101923062	3300006804	Agricultural Soil	MKSAARQQQLDPRIRSTDTRDFEGALRAKIVGQGEGVQALVDL
Ga0079220_118702001	3300006806	Agricultural Soil	MKAGARQQLDPTILSNDTRDFHQSLRARIVGQEEGV
Ga0073928_101651033	3300006893	Iron-Sulfur Acid Spring	MKPAVRQQLDPTIRSIDTREFESSLRAKVVGQTEGVQ
Ga0073928_109592102	3300006893	Iron-Sulfur Acid Spring	MKAAVRQQLDPTIRSTTTRDFEASLRAKIVGQAEGVQSLVDMYQVFC
Ga0075435_1007620772	3300007076	Populus Rhizosphere	MKPAVRQQLNPSIRSNDTRDFEGALGSKIVGQEEG
Ga0099794_107758281	3300007265	Vadose Zone Soil	MKAAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGV
Ga0099829_101124523	3300009038	Vadose Zone Soil	MKAAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGVQSLVDMF
Ga0105249_112179402	3300009553	Switchgrass Rhizosphere	MRPAVRQQLDPSIRSDDTRAFDQALRVKIVGQEEGVQA
Ga0116105_10854011	3300009624	Peatland	MKPAVRQQLDPTIRSIDTRKFESSLRSKVVGQTEGVQA
Ga0116120_10166361	3300009641	Peatland	MKAAVRQQLDPGRRSAETLEFDGALRSKIVGQAEG
Ga0126373_101964481	3300010048	Tropical Forest Soil	MRPAVRQQLNPSIRSNDTRDFEGAIRSKIVGQEEGVEAL
Ga0126373_119747091	3300010048	Tropical Forest Soil	MRTAVRQQLDPNIRSDDTLAFDQALRAKIVGQEEGVQ
Ga0074044_107169052	3300010343	Bog Forest Soil	MRAAVRQQLDPTIRSTDTHDFESSLRAKIVGQAEGVQALVDMYQVFCA
Ga0126378_112049702	3300010361	Tropical Forest Soil	MRAAVRQQLDPSIRSNDTREFHQALRAKIVGQEEGVQALV
Ga0126378_127884802	3300010361	Tropical Forest Soil	MRAAVRHQLDPSIRSNDTRGFHASLRAKIVGQEEGVQSLVD
Ga0126383_120424361	3300010398	Tropical Forest Soil	MRPAVRQQLNPSIRSNDTRDFEGAIRSKIVGQEEG
Ga0134122_118301652	3300010400	Terrestrial Soil	MRPAVRQQLDPSIRSDDTRAFDQALRVKIVGQEEGVQ
Ga0137392_112171801	3300011269	Vadose Zone Soil	MNAMKAAARQQLDPTIRSNDTRDFHSSLRAKIVGQ
Ga0137391_113192751	3300011270	Vadose Zone Soil	MNAMKAAARQQLDPTIRSNDTRDFHSSLRAKIVGQEE
Ga0137393_112448601	3300011271	Vadose Zone Soil	MKAAVRHQLDPTIRSSDTRDFQGALRAKIVGQEEGVQA
Ga0137389_113318642	3300012096	Vadose Zone Soil	MKAAVRHQLDPTIRSNDTRDFQGALRAKIVGQEEGVQALVDL
Ga0137363_102487582	3300012202	Vadose Zone Soil	MRPAVRQQLNPSIRSNDTRDFEGSLRAKIVGQEEGV
Ga0137399_107235161	3300012203	Vadose Zone Soil	MRAAARQQLDPTIRSKVARDFHGSMRAKIVGQVEG
Ga0137360_101952642	3300012361	Vadose Zone Soil	MKAAVRHQLDPTIRSTDTRDFQGSLRAKIVGQEEGVQALVDL
Ga0137361_119408751	3300012362	Vadose Zone Soil	MRAAARQQLDLTIRSKVTRDFHGSMRAKIIGQEEGVQALVDLHQVF
Ga0137398_105843211	3300012683	Vadose Zone Soil	MRPAVRQQLNPSIRSNDTRDFEGSLRAKIVGQEEGVQ
Ga0137397_106085272	3300012685	Vadose Zone Soil	MKSAVRQQLDPSIRSNDTRDFHSSLRAKIVGQEEGVQSLVD
Ga0137397_106908472	3300012685	Vadose Zone Soil	MKAAARQQLDPTIRSNDTHDFHQSLRARIVGQEEGVQALV
Ga0137397_112930431	3300012685	Vadose Zone Soil	MRPAVRQQLNPSIRSNETRDFEGSLRSKIVGQEEGVQSLVD
Ga0137397_113594321	3300012685	Vadose Zone Soil	MRSAVRQQLDPSIRSNDTRDFHSSLRAKIVGQEEGVQ
Ga0137396_109824891	3300012918	Vadose Zone Soil	MRAAARQQLDPTIRSKVARDFHGSMRAKIVGQEEG
Ga0137359_101669533	3300012923	Vadose Zone Soil	MKAAVRHQLDPTIRSNDTRDFQGSLKTKIVGQEEGV
Ga0137359_103973541	3300012923	Vadose Zone Soil	MRAAVRQQLDPSVRSTDSRDFETSLRAKIVGQEEGVQ
Ga0137419_102734971	3300012925	Vadose Zone Soil	MRSAVRQQLDPSIRSNDTRDFHSSLRAKIVGQEEGVQSL
Ga0137416_102804851	3300012927	Vadose Zone Soil	MKAAVRHQLDPTIRSTSTCDFEDALRSKIVGQVEGVQALVDMYQVF
Ga0137404_102348602	3300012929	Vadose Zone Soil	MKAAVRHQLDPTIRSTDTRDFQGSLRAKIVGQEEGVQALVD
Ga0137410_101367781	3300012944	Vadose Zone Soil	MRAAARQQLDPTIPSKVTRDFHGSMQAKIVGQEEAVQALV
Ga0137410_111894251	3300012944	Vadose Zone Soil	MRAAARQQLDLTIRSKATRDFHGSMRAKIVGQEEGVQALVDLH*
Ga0137410_117362991	3300012944	Vadose Zone Soil	MRPAVRQQLNPSIRSNETRDFEGSLRSKIVGQEEGVQSLVDL
Ga0120127_100434872	3300013503	Permafrost	MKAAVRQQLDPSIRSTDTRDFETTLRSKIVGQVEGVQSL
Ga0120127_101131172	3300013503	Permafrost	MKAAVRQQLDPSIRSSNTRDFESSLRSKIVGQTEGVQSL
Ga0181527_12576082	3300014153	Bog	MRAAVRQQLDPSIRSNDTRDFHQSLRAKIVGQEEG
Ga0167668_10516462	3300015193	Glacier Forefield Soil	MKAAVRQQLDPSIRSTDTRDFESSLRSKIVGQVEGVQSLVDMYQVFCAGL
Ga0137418_112117991	3300015241	Vadose Zone Soil	MKAAVRHQLDPTIRSTDTRDFQGSLRAKIVGQEEG
Ga0137409_114998261	3300015245	Vadose Zone Soil	MRSAVRQQLDPSIRSNDTRDFHSSLRAKIVGQEEGVQS
Ga0182036_111573821	3300016270	Soil	MRAAVRHQLDPTIRSNVTHDFHQALRSKIVGQEEGVQALVD
Ga0182041_118793511	3300016294	Soil	MRPATRQQLNPAIRSNDTRDFEGSLRSKIVGQEEGVQALVDL
Ga0182040_105658921	3300016387	Soil	MKAAARQQLDPSIRSNDTREFHQALRAKIVGQEEGVQAL
Ga0182038_118091292	3300016445	Soil	MRAAVRQQLDPSIRSNDTREFQQALRAKIVGQEEGVQALV
Ga0187803_101070571	3300017934	Freshwater Sediment	MKAAVRQQLDPGRRSAETLEFDGALRAKIVGQAEG
Ga0187776_101068761	3300017966	Tropical Peatland	MKAAVRQQLDPTIRSNDTRDFHASLRAKIVDQEKNVQSLMDMF
Ga0187783_113211411	3300017970	Tropical Peatland	MKAATRHQLDPRIRSTDTRDFEGALRAKIVGQVEGVQALVD
Ga0187780_113953292	3300017973	Tropical Peatland	MRPAVRQQLDPSLRSDDTLAFDQALRAKIVGQEEAVEALVD
Ga0187822_103145431	3300017994	Freshwater Sediment	MKAAVRQQLDPTIRSNDTRDFHTSLRAKIVGQEEGVQ
Ga0187815_101305702	3300018001	Freshwater Sediment	MKAAVRQQLDPTIRSNDTRDFHQALRAKIVGQEEGG
Ga0187874_102590442	3300018019	Peatland	MKAAVRQQLDPGRRSAETLEFDGALRSKIVGQAEGVQALVDL
Ga0187765_101584602	3300018060	Tropical Peatland	MKPAVRHQLDPSIRSTDTRDFESSLRAKIVGQAEGVQALVD
Ga0066655_107421001	3300018431	Grasslands Soil	MKPAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGVQSLVDMFQV
Ga0066667_114463792	3300018433	Grasslands Soil	MKAAARQQLDPTIRSNDTREFQNYLRAKIVGQEEGVQALVDV
Ga0181514_10315221	3300019268	Peatland	MRAAVRQQLDPTIRSNDTRDFHGSLRSKIVGQEEGVQALVDM
Ga0193751_10084151	3300019888	Soil	MKAAVRHQLDPSIRSTDTRDFESSLRAKIVGQAEGVQSL
Ga0193728_10236086	3300019890	Soil	MKAAVRHQLDPSIRSTDTRDFESSLRAKIVGQAEGVQSLVDMYQVF
Ga0210407_100024731	3300020579	Soil	MKAAARQQLDPTIRSNDTRDFQSSLRAKIVGQEEGVQSL
Ga0210407_100366595	3300020579	Soil	MRAAARQQLDPSIRSTDSRDFQSSLTAKIVGQEEGVQ
Ga0210407_111950763	3300020579	Soil	MKAAVRHQLDPTIRSSDTCDFHSSLRAKIVGQEEGVQS
Ga0210403_102483982	3300020580	Soil	MKPAVRQQLDPSIRSTDTRDFEGSLRAKIVGQAEGLQALVDMYQ
Ga0210395_113964581	3300020582	Soil	MKAAARQQLDPTIRSNDTRDFHQSLRARIVGQEEG
Ga0210401_101787131	3300020583	Soil	MKAATRQQLDPTIRSNDTRDFHQSLRARIVGQEEGV
Ga0215015_100062713	3300021046	Soil	MRPAVRQQLNPSIRSNDTRDFEGSLRAKIVGQEEGVQSLVD
Ga0179596_104503532	3300021086	Vadose Zone Soil	MKAAVRHQLDPTIRSTDTCDFQSSLCAKIVGQEEGV
Ga0210406_108549231	3300021168	Soil	MKAATRQQLDPTIRSNDTRDFHQSLRARIVGQEEGVQAL
Ga0210400_100876171	3300021170	Soil	MKAAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGVQSL
Ga0210387_112330691	3300021405	Soil	MKAAARQQLDPTIRSNDTRDFHQSLRARIVGQEEGV
Ga0210384_110863301	3300021432	Soil	MKSAVRQQLDPSIRSTDTRDFESSLRAKIVGQAEGVQALVDMYQVFCAGL
Ga0210410_103300702	3300021479	Soil	MRAAARQQLDPTIRSNDTRDFQSSLRAKIVGQEEGV
Ga0210409_101599951	3300021559	Soil	MKAAAKQQLDPSIRSTDTRGFHSALRSKIVGQEEGVQS
Ga0126371_108366951	3300021560	Tropical Forest Soil	MKAAARQQLDPSIRSNDTREFHNALRSKIVGQEEGVLA
Ga0126371_121884702	3300021560	Tropical Forest Soil	MRPAVRQQLDPSIRSTDTRDFEASLRAKIVGQAEGVQSLVDMYQVFCA
Ga0247691_10414871	3300024222	Soil	MKAAARQQLDPTIRSNDTRDFHQSLRARIVGQEEGVQALVDL
Ga0179589_101047492	3300024288	Vadose Zone Soil	MKSAVRQQLDPTIRSIDTRDFEASLRAKVVGQAEGVQSLV
Ga0137417_10337391	3300024330	Vadose Zone Soil	MKAAVRHQLDPTIRSSDTRDFQGALRAKIVGQEEGVQALGSTCTRSS
Ga0137417_143075512	3300024330	Vadose Zone Soil	MKAAVRHQWDPTILSNDTRDFQGPALENCRAREGVQALVDLYQVFCRG
Ga0207692_103800931	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKAAARQQLDPSIRSNDTREFHNALRSKIVGQEEGVQALV
Ga0207664_115874731	3300025929	Agricultural Soil	MRPAVRQQLDPSIRSEDTRAFDQALRMKIVGQEEGVQALVD
Ga0207665_104131231	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKAATRQQLDPTIRSNDTREFQNYLRAKIVGQEEGVQALVD
Ga0209862_10567001	3300026222	Permafrost Soil	MKAAVRQQLDPSIRSTDTRDFETTLRSKIVGQVEGVQSLVMKLDRYKLR
Ga0209438_10275981	3300026285	Grasslands Soil	MKAAVRHQLDPTIRSSDTCDFHSSLRAKIVGQEEGVQSLVDMFQ
Ga0209237_12245012	3300026297	Grasslands Soil	MKAAVRHQLDPTIRSNDTCDFHASLRAKIVGQEEGVQSLVDM
Ga0209238_12103272	3300026301	Grasslands Soil	MKAAARQQLDPTIRSNDTREFQNYLRAKIVGQEEGVQA
Ga0209238_12118561	3300026301	Grasslands Soil	MRSAARHQLDPTIRSSDTRDFHGALRAKIVGQEEGVQALVD
Ga0209154_11190452	3300026317	Soil	MKAAVRHQLDPTIRSNDTCDFHASLRAKIVGQEEGVQSL
Ga0257147_10758271	3300026475	Soil	MRPAVRQQLNPSIRSNDTRDFEGSLRAKIVGQEEGVQSLVDL
Ga0209648_106991022	3300026551	Grasslands Soil	MKAAVRQQLDPTIRSNDTRDFHSSLRAKIVGQEEG
Ga0207776_10256481	3300027035	Tropical Forest Soil	MRAAVRQQLDPSIRSTDTREFQQSLRAKIVGQEEGVQALV
Ga0207780_10645181	3300027313	Tropical Forest Soil	MRAAVRQQLDPTIRSNDTRDFHQSLRAKIVGQEEG
Ga0209004_10947131	3300027376	Forest Soil	MRAAAAVQLDPTIPGNDTRDFHTAMRAKIVGQEEGVQ
Ga0209076_11257151	3300027643	Vadose Zone Soil	MKAAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGVQSLVD
Ga0209076_11811232	3300027643	Vadose Zone Soil	MKAAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGVQSLV
Ga0209588_10851691	3300027671	Vadose Zone Soil	MKAAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGVKS
Ga0209118_10992912	3300027674	Forest Soil	MKAAARQQLDPSIRSNDTRDFHQSLRARIVGQEEGVQALVD
Ga0209011_100212010	3300027678	Forest Soil	MKAAVRQQLDPTIRSTDTCDFHSSLRAKIVGQEEGVQSL
Ga0209447_101801282	3300027701	Bog Forest Soil	MKAAVRSQLDPNIRSNDTRDFHESLRAKIVGQEEGVQALVDL
Ga0209038_100580431	3300027737	Bog Forest Soil	MKAAVRQQLDPTIRSIDTREFESSLRAKVVGQVEGVQSLVDMYQV
Ga0208989_102786711	3300027738	Forest Soil	MKAAVRHQLDPTIRSTDTRDFQGSLRAKIVGQEEGVQA
Ga0209166_104252892	3300027857	Surface Soil	MKAATRQQLDPTIRSNDTRDFHQSLRARIVGQEEGVQA
Ga0209283_104159622	3300027875	Vadose Zone Soil	MKAAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGVQSLVDM
Ga0209283_106515411	3300027875	Vadose Zone Soil	MKAAARQQLDPTIRSNDTRDFHSSLRAKIVGQEEGV
Ga0209067_105573803	3300027898	Watersheds	MRAAVRQQLDPSVRSTDSRDFETSLRAKIVGQEEGV
Ga0137415_104484602	3300028536	Vadose Zone Soil	MKAAVRHQLDPTIRSNDTCDFHSSLRAKIVGQEEGVQS
Ga0318516_101802601	3300031543	Soil	MRAAVRQQLDPSIRSNDTREFHQALRAKIVGQEEG
Ga0310915_104045992	3300031573	Soil	MKAAVRQQLDPSIRSNDTREFQQSLRAKIVGQEEGVQAL
Ga0307476_113145802	3300031715	Hardwood Forest Soil	MPMKAAARQQLDPSIRSTDSRDFEGALRSKIVGQAEG
Ga0318501_101586953	3300031736	Soil	MTTAAGQQLDPSSRSADARAFDSAMRSKIVGQEEA
Ga0307475_106757792	3300031754	Hardwood Forest Soil	MKAAVRHQLDPTIRSTDTRDFQGALRAKIVGQEEGVQALV
Ga0306919_103663761	3300031879	Soil	MKAAVRQQLDPSIRSNDTREFQQSLRAKIVGQEEGVQALVD
Ga0306921_103855511	3300031912	Soil	MKAAARQQLDPTIRSNDTRDFHQSLRAKIVGQEEG
Ga0310916_103745342	3300031942	Soil	MKAAVRQQLDPSIRSNDTREFQQSLRAKIVGQEEG
Ga0306926_126131911	3300031954	Soil	MRAAVRHQLDPTIRSNVTHDFHQALRSKIVGQEEGV
Ga0307479_100232617	3300031962	Hardwood Forest Soil	MKAAVRHQLDPTIRSNDTRDFQGALRAKIVGQEEG
Ga0307479_100606045	3300031962	Hardwood Forest Soil	MRAARKQLDPTIRSNDTRDFHSLMRGKIVGQEEGVQALVD
Ga0306924_103013823	3300032076	Soil	MRPAVRQQLNPTIRSNDTRDFECALRAKIVGQEEGV
Ga0307470_105736272	3300032174	Hardwood Forest Soil	MRPAVRQQLNPSIRSNDTRDFEGALRSKIVGQEEGVQ
Ga0307472_1010004242	3300032205	Hardwood Forest Soil	MRSAVRQQLDPSIRSNDTRDFHSSLRAKIVGQEEG
Ga0335069_103586121	3300032893	Soil	MRAAVRQQLDPTIRSNGTRDFHQSLRSKIVGQEEGVQALVD
Ga0335083_114329091	3300032954	Soil	MKSAARQQLDPTIRSNETLDFETSLKSKIVGQTEG
Ga0326728_110877441	3300033402	Peat Soil	MKAAVRHQLDPTIRSNDTRDFHQALRAKIVGQEEG
Ga0326727_106000441	3300033405	Peat Soil	MRAAVRQQLDPSIRSNDTRDFHQSLRAKIVGQEEGV
Ga0314864_0181678_2_124	3300033805	Peatland	MKAAARHQLDPSIRSTDTRDFESSLRAKIVGQAEGIQALVD
Ga0314867_006258_1_129	3300033808	Peatland	MKSAARQQLDPTVRSGETREFEAGLRSKIVGQAEGVQALVDLY

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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