Metagenome / Metatranscriptome Family F049609

Basic Information
Family ID	F049609
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	47 residues
Representative Sequence	GRTEIVINAHPTSLSFYLANGYREGEWRDARPVPANLIRVGKRLS
Number of Associated Samples	127
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.74 %
% of genes near scaffold ends (potentially truncated)	97.26 %
% of genes from short scaffolds (< 2000 bps)	89.73 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Most Common Taxonomy
Group	Bacteria (96.575 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.192 % of family members)
Environment Ontology (ENVO)	Unclassified (34.932 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.466 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.33% β-sheet: 21.92% Coil/Unstructured: 65.75%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF01522	Polysacc_deac_1	32.88
PF13515	FUSC_2	6.16
PF04632	FUSC	4.79
PF06081	ArAE_1	1.37
PF03401	TctC	0.68
PF03328	HpcH_HpaI	0.68
PF14833	NAD_binding_11	0.68
PF00583	Acetyltransf_1	0.68
PF03404	Mo-co_dimer	0.68
PF00872	Transposase_mut	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	32.88
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	4.79
COG4129	Uncharacterized membrane protein YgaE, UPF0421/DUF939 family	Function unknown [S]	1.37
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.68
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.68
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.68
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.68
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.58 %
Unclassified	root	N/A	3.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.58 %
Unclassified	root	N/A	3.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.58 %
Unclassified	root	N/A	3.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	92.47 %
Unclassified	root	N/A	3.42 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.73 %
Unclassified	root	N/A	3.42 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	38.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	30.82 %
Unclassified	root	N/A	3.42 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.68 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	38.36 %
Unclassified	root	N/A	3.42 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.37 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	38.36 %
Unclassified	root	N/A	3.42 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.37 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.68 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	38.36 %
Unclassified	root	N/A	3.42 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.37 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.68 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	38.36 %
Unclassified	root	N/A	3.42 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.37 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.68 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01A3CVL	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
2199352025\|deepsgr__Contig_111601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	939	Open in IMG/M
3300000559\|F14TC_102811152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1059241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10092371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300000955\|JGI1027J12803_103170679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300004479\|Ga0062595_101861547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	575	Open in IMG/M
3300005104\|Ga0066818_1021732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	539	Open in IMG/M
3300005171\|Ga0066677_10611830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	617	Open in IMG/M
3300005171\|Ga0066677_10685357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300005179\|Ga0066684_10212839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1255	Open in IMG/M
3300005332\|Ga0066388_100753067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1574	Open in IMG/M
3300005332\|Ga0066388_102518501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	935	Open in IMG/M
3300005337\|Ga0070682_101164726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300005436\|Ga0070713_100382848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1311	Open in IMG/M
3300005444\|Ga0070694_101653296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300005455\|Ga0070663_101857327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300005544\|Ga0070686_100158189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1593	Open in IMG/M
3300005713\|Ga0066905_101262785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300005764\|Ga0066903_101812113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300005843\|Ga0068860_101052869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	832	Open in IMG/M
3300006050\|Ga0075028_100335201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300006572\|Ga0074051_11793531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1121	Open in IMG/M
3300006578\|Ga0074059_11544569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	702	Open in IMG/M
3300006580\|Ga0074049_13090005	Not Available	550	Open in IMG/M
3300006603\|Ga0074064_11677075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	704	Open in IMG/M
3300006796\|Ga0066665_10231269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1452	Open in IMG/M
3300006797\|Ga0066659_10929056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300006800\|Ga0066660_10099224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2057	Open in IMG/M
3300006852\|Ga0075433_10840099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300006854\|Ga0075425_102922129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300006880\|Ga0075429_100407405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1191	Open in IMG/M
3300006903\|Ga0075426_10956236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300009036\|Ga0105244_10085409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1557	Open in IMG/M
3300009088\|Ga0099830_11349174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300009088\|Ga0099830_11831125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300009792\|Ga0126374_11287957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300010043\|Ga0126380_12287429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300010046\|Ga0126384_11125036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300010047\|Ga0126382_10544016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	943	Open in IMG/M
3300010047\|Ga0126382_10557096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300010360\|Ga0126372_11015986	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300010361\|Ga0126378_12236900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	624	Open in IMG/M
3300010362\|Ga0126377_10590708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1154	Open in IMG/M
3300010366\|Ga0126379_11373554	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300010366\|Ga0126379_11493442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300010366\|Ga0126379_12784761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300010398\|Ga0126383_10509707	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1263	Open in IMG/M
3300010863\|Ga0124850_1031779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1690	Open in IMG/M
3300012202\|Ga0137363_10285818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1350	Open in IMG/M
3300012205\|Ga0137362_10479693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1076	Open in IMG/M
3300012210\|Ga0137378_10040030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4189	Open in IMG/M
3300012349\|Ga0137387_10121502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1841	Open in IMG/M
3300012356\|Ga0137371_11060831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300012358\|Ga0137368_10596449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300012360\|Ga0137375_10335450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1349	Open in IMG/M
3300012362\|Ga0137361_10145714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2112	Open in IMG/M
3300012363\|Ga0137390_11929824	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012532\|Ga0137373_10175162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1787	Open in IMG/M
3300012582\|Ga0137358_10143505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1625	Open in IMG/M
3300012923\|Ga0137359_10231948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1648	Open in IMG/M
3300012930\|Ga0137407_11781799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300012948\|Ga0126375_11019819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300012961\|Ga0164302_10098948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1606	Open in IMG/M
3300012971\|Ga0126369_10168887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2077	Open in IMG/M
3300012989\|Ga0164305_11126870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300013306\|Ga0163162_10378527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1549	Open in IMG/M
3300014317\|Ga0075343_1032330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	976	Open in IMG/M
3300015201\|Ga0173478_10635577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300016294\|Ga0182041_10085717	All Organisms → cellular organisms → Bacteria → Proteobacteria	2267	Open in IMG/M
3300016294\|Ga0182041_10912453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300016294\|Ga0182041_11735108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	578	Open in IMG/M
3300018056\|Ga0184623_10295195	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300018466\|Ga0190268_11550379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	580	Open in IMG/M
3300020579\|Ga0210407_10484160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	967	Open in IMG/M
3300021086\|Ga0179596_10451117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300021168\|Ga0210406_10410087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1084	Open in IMG/M
3300021439\|Ga0213879_10077754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300022883\|Ga0247786_1115995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	587	Open in IMG/M
3300025735\|Ga0207713_1126033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	853	Open in IMG/M
3300026326\|Ga0209801_1290955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300026343\|Ga0209159_1205786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300026497\|Ga0257164_1003640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1617	Open in IMG/M
3300026524\|Ga0209690_1058041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1699	Open in IMG/M
3300026532\|Ga0209160_1092507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1556	Open in IMG/M
3300026552\|Ga0209577_10387539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1012	Open in IMG/M
3300026557\|Ga0179587_10518381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	783	Open in IMG/M
3300026557\|Ga0179587_10652992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300027288\|Ga0208525_1052096	Not Available	518	Open in IMG/M
3300027646\|Ga0209466_1045202	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300027874\|Ga0209465_10107823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1369	Open in IMG/M
3300028047\|Ga0209526_10498532	Not Available	794	Open in IMG/M
3300028717\|Ga0307298_10025560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1551	Open in IMG/M
3300028809\|Ga0247824_10180784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1146	Open in IMG/M
3300031544\|Ga0318534_10194112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1172	Open in IMG/M
3300031545\|Ga0318541_10456535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300031546\|Ga0318538_10514209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	649	Open in IMG/M
3300031561\|Ga0318528_10738277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300031573\|Ga0310915_10075622	All Organisms → cellular organisms → Bacteria → Proteobacteria	2228	Open in IMG/M
3300031668\|Ga0318542_10126925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1252	Open in IMG/M
3300031668\|Ga0318542_10176872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1069	Open in IMG/M
3300031679\|Ga0318561_10575266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300031680\|Ga0318574_10105275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1568	Open in IMG/M
3300031736\|Ga0318501_10017209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2962	Open in IMG/M
3300031744\|Ga0306918_10029439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3451	Open in IMG/M
3300031744\|Ga0306918_10460403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	994	Open in IMG/M
3300031747\|Ga0318502_10425733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300031747\|Ga0318502_10892368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300031763\|Ga0318537_10116359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	992	Open in IMG/M
3300031763\|Ga0318537_10397160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300031770\|Ga0318521_10193654	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300031782\|Ga0318552_10319306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300031782\|Ga0318552_10523037	Not Available	605	Open in IMG/M
3300031796\|Ga0318576_10021258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2582	Open in IMG/M
3300031796\|Ga0318576_10037341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2051	Open in IMG/M
3300031796\|Ga0318576_10246631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	842	Open in IMG/M
3300031797\|Ga0318550_10222129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	915	Open in IMG/M
3300031799\|Ga0318565_10606044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300031821\|Ga0318567_10670528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300031846\|Ga0318512_10028512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2375	Open in IMG/M
3300031860\|Ga0318495_10162663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1007	Open in IMG/M
3300031860\|Ga0318495_10220684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300031893\|Ga0318536_10151762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1177	Open in IMG/M
3300031894\|Ga0318522_10155266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	863	Open in IMG/M
3300031896\|Ga0318551_10143989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300031896\|Ga0318551_10926985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300031897\|Ga0318520_10204162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1166	Open in IMG/M
3300031910\|Ga0306923_10162273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2552	Open in IMG/M
3300031942\|Ga0310916_11185760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M
3300031944\|Ga0310884_10318808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	872	Open in IMG/M
3300031945\|Ga0310913_10721825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	704	Open in IMG/M
3300031946\|Ga0310910_10077437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2414	Open in IMG/M
3300031959\|Ga0318530_10443724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300031981\|Ga0318531_10404766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300032010\|Ga0318569_10068418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1567	Open in IMG/M
3300032012\|Ga0310902_10133507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1381	Open in IMG/M
3300032042\|Ga0318545_10102040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1005	Open in IMG/M
3300032043\|Ga0318556_10410299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	709	Open in IMG/M
3300032060\|Ga0318505_10017811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2715	Open in IMG/M
3300032066\|Ga0318514_10749014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300032068\|Ga0318553_10309584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300032068\|Ga0318553_10586528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300032076\|Ga0306924_11658338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	672	Open in IMG/M
3300032144\|Ga0315910_11625585	Not Available	504	Open in IMG/M
3300033290\|Ga0318519_10968884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300033550\|Ga0247829_10066158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.84%
Host-Associated	Host-Associated	6.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.47%
Plants	Host-Associated → Plants	6.16%
Aquatic	Environmental → Aquatic	1.37%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.79%
Sediment	Environmental → Aquatic → Sediment	1.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.51%
Loam	Environmental → Terrestrial → Soil → Loam	10.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.37%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.37%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.37%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005104	Soil and rhizosphere microbial communities from Laval, Canada - mgHAC	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049609

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_04058450	2170459005	Grass Soil	MRPLGRTEIIINAHPTSLAFHLVNKYRQGEWGEAGPLPATLIRVGKRLP
deepsgr_01752410	2199352025	Soil	AFGRTMVVINAHPTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA
F14TC_1028111521	3300000559	Soil	TEIVINAHPTSLTFYLANGYREGEWRDAALVPATLIRVGKRLP*
AP72_2010_repI_A10DRAFT_10592411	3300000651	Forest Soil	AEQAARAFGRTEIVINAHPTSLTFYLANGYREGEWRDAAPVPATLIRVGKRLP*
AF_2010_repII_A001DRAFT_100923712	3300000793	Forest Soil	PTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS*
JGI1027J12803_1031706792	3300000955	Soil	NAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS*
Ga0062595_1018615471	3300004479	Soil	AARTFGRTIVVINAHPTSLTFYLANGYRRGDWKDAGPVPATLVRVGKRLS*
Ga0066818_10217321	3300005104	Soil	TMVVINAHSTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA*
Ga0066677_106118302	3300005171	Soil	LAEEAARALGRTEIVINAHPTSLEFYLAHGYREGEWGDRSPVPSGLVRVGKRLP*
Ga0066677_106853572	3300005171	Soil	EIVINAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS*
Ga0066684_102128391	3300005179	Soil	RPEIIINAHPTSLAFYLANGYRQGEWRNAGPLPASLIRVGKRLP*
Ga0066388_1007530671	3300005332	Tropical Forest Soil	ALGRTEVVINAHPTSLTFYLANGYVEGDWRDAGPVPAGLIRVGKRLPRL*
Ga0066388_1025185011	3300005332	Tropical Forest Soil	QAARAFGRTEIVINAHPTSLTFYLANGYREGEWRDAAPVPATLIRVGKRLP*
Ga0070682_1011647261	3300005337	Corn Rhizosphere	AHAFGRTMVIINAHPTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA*
Ga0070713_1003828481	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVVINAHSTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA*
Ga0070694_1016532961	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	HAARGLGRTEIVINAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS*
Ga0070663_1018573272	3300005455	Corn Rhizosphere	AFGRTMVVINAHPTSLTFYLANGYRTGDWHDAGPVPVGLIRVGKRLA*
Ga0070686_1001581893	3300005544	Switchgrass Rhizosphere	AENAARTFGKTIVVINAHPTSLTFYLANGYRRGDWKNAGPVPATLVRVGKRLS*
Ga0066905_1012627852	3300005713	Tropical Forest Soil	VINAHPPSLSFYLANGYREGDWRDHGPVAAGLIRVGKRLR*
Ga0066903_1018121132	3300005764	Tropical Forest Soil	IVINAHPTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS*
Ga0068860_1010528692	3300005843	Switchgrass Rhizosphere	RLAESAARTFGRTIVVINAHPTSLTFYLANGYRRGDWKDAGPVPATLVRVGKRLS*
Ga0075028_1003352012	3300006050	Watersheds	HPTSLDFYLANGYREGEWADRGPVPSGLIRVGKRLP*
Ga0074051_117935312	3300006572	Soil	VVINAHPTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA*
Ga0074059_115445692	3300006578	Soil	KAAHAFGRTIVVINAHPTSLTFYLANGYRLGDWQDAGPVPATLIRVGKRLR*
Ga0074049_130900051	3300006580	Soil	AAHAFGRTMVVINAHSTSLTFYLGNGYRTGNWHDAGPVPAGLTRVGKRLA*
Ga0074064_116770752	3300006603	Soil	AEKAAHAFGRTTVVINAHPTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKQLA*
Ga0066665_102312691	3300006796	Soil	GHGRILLKRAEEAARALCRTEIIINAHPTSLEFYLAHGYRESEWGDRGPVLSGLVRVGKRLP*
Ga0066659_109290562	3300006797	Soil	RALGKTEIVINAHPSSLAFYLANGYREGEWDDAGPPRPGLIRVGIYLP*
Ga0066660_100992243	3300006800	Soil	TEIVINAHPTSLEFYLAHGYREGEWGDRGPVPSGLVRVGKRLP*
Ga0075433_108400991	3300006852	Populus Rhizosphere	AARGLGRNEIVINAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS*
Ga0075425_1029221292	3300006854	Populus Rhizosphere	AARALGKTEIVINAHPSSLDFYLANGYRGGEWADRGPIPSGLVRVGKRLL*
Ga0075429_1004074052	3300006880	Populus Rhizosphere	FGKTEIVINAHPSSLAFYVANGYREGEWDDPGPPRPGLIRVGKRLP*
Ga0075426_109562361	3300006903	Populus Rhizosphere	SGKAMELKLAEEAARALGKTEIVINAHPSSLDFYLANGYRGGEWADRGPIPSGLVRVGKRLL*
Ga0105244_100854091	3300009036	Miscanthus Rhizosphere	HAFGRTMVVINAHSTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA*
Ga0099830_113491741	3300009088	Vadose Zone Soil	TSLDFYLANGYREGEWADRGPVPWGLIRVGKRLL*
Ga0099830_118311252	3300009088	Vadose Zone Soil	VIINAHPTSLAFYLANGYREGAWRDKGPVPAGLIRVGKRLP*
Ga0126374_112879572	3300009792	Tropical Forest Soil	GRTEIVINAHPTSLSFYLANGYREGEWRDARPVPANLIRVGKRLS*
Ga0126380_122874292	3300010043	Tropical Forest Soil	INAHPTSLTFYLANGYREGEWRDAAPVPTTLIRVGKRLP*
Ga0126384_111250361	3300010046	Tropical Forest Soil	HGAVLLRLAEAAAHALGRSEIVINAHPASLAFYRAHGYAEGPWRDKGPVPPPLIRVGKRLSPG*
Ga0126382_105440162	3300010047	Tropical Forest Soil	LAEQAARAFGRTEIVINAHPTSLTFYLVNGYREGEWRDAAPVPATLIRVGKRLP*
Ga0126382_105570961	3300010047	Tropical Forest Soil	DAARGLGRTEIVINAHPTSLSFYRANGYREGEWRDARPLPTNLIRVGKRLS*
Ga0126372_110159861	3300010360	Tropical Forest Soil	GAVLLRLAEAAAHALGRSEIVINAHPASLAFYRAHGYAEGPWRDKGPVPPPLIRVGKRLSPG*
Ga0126378_122369002	3300010361	Tropical Forest Soil	LAEQAARAFGRTEIIINAHPTSLTFYLANGYREGEWRDAAPVPATLIRVGKRLP*
Ga0126377_105907081	3300010362	Tropical Forest Soil	IVINAHPTSLTFYLANGYREGEWRDAAPVPATLIRVGKRLP*
Ga0126379_113735541	3300010366	Tropical Forest Soil	TEIVINAHPTSLTFYLANGYVEGDWRDAGPVPAGLIRVGKRLPRL*
Ga0126379_114934421	3300010366	Tropical Forest Soil	RQGHGSVLLRLAEDAARGLGRTEIVINAHPTSLSFYRANGYREGEWRDARPLPTNLIRVGKRLS*
Ga0126379_127847611	3300010366	Tropical Forest Soil	TEIVINAHPTSLGFYLTNGYREGEWSDVRPPPATLIRVGKRLP*
Ga0126383_105097071	3300010398	Tropical Forest Soil	LGRTEVVINAHPTSLAFYLAHGYREGEWRDKGPVPATLIRVGKRL*
Ga0124850_10317791	3300010863	Tropical Forest Soil	AEQTARAFSRTEIVINAHPTSLPFYLANGYREGEWGDAAPVPATLIRVGKRLP*
Ga0137363_102858181	3300012202	Vadose Zone Soil	RTEIVINAHPTSLDFYLANGYREGEWADRGPVPSGLIRVGKRLP*
Ga0137362_104796931	3300012205	Vadose Zone Soil	EQAAHAFGSTEIVINAHPTSLTFYLANGYREGEWRDAAPAPATLIRVGKRLP*
Ga0137378_100400301	3300012210	Vadose Zone Soil	AFGSTEIVINAHPTSLTFYLANGYREGEWRDAAPAPATLIRIGKRLP*
Ga0137387_101215023	3300012349	Vadose Zone Soil	FGSTEIVINAHPTSLTFYLANGYREGEWRDAAPAPATLIRIGKRLP*
Ga0137371_110608312	3300012356	Vadose Zone Soil	LRLAEQTARALGKTEIVINAHPSSLAFYLANGYREGEWDEAGPPRPGLIRVGKRLP*
Ga0137368_105964491	3300012358	Vadose Zone Soil	PSSLAFYLANGYREGEWDDAGPPRPTLIRVGKRLP*
Ga0137375_103354501	3300012360	Vadose Zone Soil	ALQRLGHGRVLLRSAVHAAHASGRTELIIIAHTTWLSFYIAIGYREGEWRDAAPAPATLIRVGKRLP*
Ga0137361_101457141	3300012362	Vadose Zone Soil	EAARALGRTEIVINAHPTSLDFYLANGYREGEWADRGPVPSGLIRVGKRLP*
Ga0137390_119298242	3300012363	Vadose Zone Soil	PASLTFYLANGYCEGAWRDKGPAPATLVRVGKRLP*
Ga0137373_101751624	3300012532	Vadose Zone Soil	VINAHPTSLTFYLANGYREGEWRDAAPAPATLIRVGKRLP*
Ga0137358_101435052	3300012582	Vadose Zone Soil	MRPLGRTEIIINAHPTSLAFYLVNEYRQDEWGEAGPLPATLIRVGKRSP*
Ga0137359_102319482	3300012923	Vadose Zone Soil	GRNEIVINAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS*
Ga0137407_117817991	3300012930	Vadose Zone Soil	HPTSLTFYLANGYREGGWRDASPVPAALIRVGKRLG*
Ga0126375_110198192	3300012948	Tropical Forest Soil	RLAEQAARAFGRTEIVINAHPTSLTFYLANGYREGEWRDAAPVPATLIRVGKRLP*
Ga0164302_100989481	3300012961	Soil	AFGRTMVVINAHPTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA*
Ga0126369_101688874	3300012971	Tropical Forest Soil	ESAARALGRTEIVINAHPTSLTFYLANGYVEGDWRDAGPVPAGLIRVGKHLAPL*
Ga0164305_111268701	3300012989	Soil	TSLSFYLANGYREGEWRDAKPVPANLIRVGKRLP*
Ga0163162_103785271	3300013306	Switchgrass Rhizosphere	INAHPTSLTFYLANGYRTGNWHDAGPVPAGLTRVGKRLA*
Ga0075343_10323302	3300014317	Natural And Restored Wetlands	AHPTSVSFYLANGYAPGEWRDAGPPHPDLIRVGKVLADSAD*
Ga0173478_106355771	3300015201	Soil	VVINAHPTSLTFYLANGYRRGDWKDAGPVPATLVRVGKRLS*
Ga0182041_100857173	3300016294	Soil	PTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS
Ga0182041_109124531	3300016294	Soil	RGLGRTEIVINAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0182041_117351082	3300016294	Soil	LQLAEQAARAFSRTEIVINAHPTSLPFYLANGYREGEWGDAAPVPATLIRVGKRLP
Ga0184623_102951952	3300018056	Groundwater Sediment	VVINAHPTSLTFYLANGYCEGEWRDKGPVPATLIRVGKRLG
Ga0190268_115503792	3300018466	Soil	HAFGRAMVIINAHPTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA
Ga0210407_104841601	3300020579	Soil	MRPLGRTEIIINAHPTSLACNEYRQGEWGKAGPPAILIRVGKRLP
Ga0179596_104511172	3300021086	Vadose Zone Soil	EIVINAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0210406_104100871	3300021168	Soil	PLGRTEIIINAHPTSLACNEYRQGEWGKAGPPAILIRVGKRLP
Ga0213879_100777541	3300021439	Bulk Soil	ARNLGRTEIVINAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0247786_11159951	3300022883	Soil	ENAARTFGKTIVVINAHPTSLTFYLANGYRRGDWKDAGPVPATLVRVGKRLS
Ga0207713_11260332	3300025735	Switchgrass Rhizosphere	INAHSTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA
Ga0209801_12909552	3300026326	Soil	AHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0209159_12057861	3300026343	Soil	AARGLGRTEIVINAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0257164_10036402	3300026497	Soil	LAEEAARALGRTEIVINAHPTSLDFYLANGYREGEWADRGPVPWGLIRVGKRLP
Ga0209690_10580411	3300026524	Soil	GRNEIVINAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0209160_10925072	3300026532	Soil	NAHPTSLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0209577_103875392	3300026552	Soil	RTLLKLAEEAARALGRTEIVINAHPTSLEFYLAHGYREGEWGDRGPVPSGLVRVGKRLP
Ga0179587_105183812	3300026557	Vadose Zone Soil	AEKAAHAFGRTIVVINAHPTSLTFYLANGYRIGDWQDAGPVPATLIRVGKRLR
Ga0179587_106529922	3300026557	Vadose Zone Soil	MRPLGRTEIIINAHPTSLAFYLVNEYRQGEWGEAGPLPAILIRVGKRLP
Ga0208525_10520961	3300027288	Soil	LQRQGHGAVLLRLAERAAQELGRTEVVINAHPTSLTFYLVNGYAEGEWRDAGPVLAGLVRVGKRLAS
Ga0209466_10452021	3300027646	Tropical Forest Soil	AEKAVRALGRTEVVINAHPTSLAFYLAHGYREGEWRDKGPVPATLIRVGKRLD
Ga0209465_101078232	3300027874	Tropical Forest Soil	IVINAHPTSLSFYLANGYREGEWRDAAPVPANLIRVGKRLS
Ga0209526_104985322	3300028047	Forest Soil	HPTSLSFYLANGYREGDWRDAKPVPANLIRVGKRLS
Ga0307298_100255603	3300028717	Soil	VINAHPTSLTFYLANGYRIGDWQDAGPVPATLIRVGKRLR
Ga0247824_101807841	3300028809	Soil	MVIINAHPTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA
Ga0318534_101941121	3300031544	Soil	AHPTSLSFYLANGYREGEWHDARPVPANLIRVGKRLS
Ga0318541_104565351	3300031545	Soil	EHAARGLGRTEIVINAHPTSLSFYLANGYREGEWRDARPLPANLIRVAKRLS
Ga0318538_105142091	3300031546	Soil	AEHAARGLGRTEIVINAHPTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS
Ga0318528_107382771	3300031561	Soil	EIVINAHPTSLSFYLVNGYREGEWRDTKPVPANLIRVGKRLS
Ga0310915_100756221	3300031573	Soil	IVINAHPTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS
Ga0318542_101269251	3300031668	Soil	EIVINAHPTSLSFYLANGYREGEWHDARPVPANLIRVGKRLS
Ga0318542_101768722	3300031668	Soil	SRNHAARGLGRTEIVINAHPTSVSFYLANGYREGEWRDARPLPANLIRVGKRLS
Ga0318561_105752662	3300031679	Soil	GRTEIVINAHPTSLSFYLVNGYREGEWRDTKPVPANLIRVGKRLS
Ga0318574_101052753	3300031680	Soil	LRLAEHAARGLGRTEIVINAHPTSLSFYLASGYREGEWRDAGPVPANLIRVGKRLS
Ga0318501_100172091	3300031736	Soil	ALAFGRTEIVINAHPTSLTFYLANGYREGEWRDAAPVPATLIRVGKRLP
Ga0306918_100294394	3300031744	Soil	VINAHPTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS
Ga0306918_104604032	3300031744	Soil	AHPTSLSFYLAHGYREGEWRDAAPVPANLIRVGKRLS
Ga0318502_104257332	3300031747	Soil	NAHPTSLAFYLANGYREGEWRDAKPVPPNLIRVGKRLS
Ga0318502_108923681	3300031747	Soil	NAHPTSLSFYLANGYREGEWRDAAPVPANLIQVGKRLS
Ga0318537_101163591	3300031763	Soil	PTSLSFYLAHGYREGEWRDAAPVPANLIRVGKRLS
Ga0318537_103971601	3300031763	Soil	LRLAEHAARGLGRTEIVINAHPTSLSFYLANGYREGEWRDARPLPANLIRVAKRLS
Ga0318521_101936541	3300031770	Soil	INAHPTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS
Ga0318552_103193061	3300031782	Soil	HPTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS
Ga0318552_105230372	3300031782	Soil	EIVINAHPTSVSFYLANGYREGEWRDARPLPANLIRVGKRLS
Ga0318576_100212584	3300031796	Soil	AEQAALAFGRTEIVINAHPTSLTFYLANGYREGEWRDAAPVPATLIRVGKRLP
Ga0318576_100373411	3300031796	Soil	GRTEIVINAHPTSLSFYLANGYREGEWRDAAPLPANLIRVGKRLS
Ga0318576_102466311	3300031796	Soil	PASLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0318550_102221291	3300031797	Soil	FGRTEIVINAHPASLTFYLANGYREGEWRDAAPVPATLIRVGKRLP
Ga0318565_106060441	3300031799	Soil	RGLGRTEIVINAHPTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS
Ga0318567_106705282	3300031821	Soil	GHGSVLLRLAEHAARGLGRTEIVINAHPTSLSFYLASGYREGEWRDAGPVPANLIRVGKRLS
Ga0318512_100285123	3300031846	Soil	GRTEIVINAHPASLTFYLANGYREGEWRDAAPVPATLIRVGKRLP
Ga0318495_101626632	3300031860	Soil	GAASLTFYLANGYREGEWRDAAPVPATLIRVGKRLP
Ga0318495_102206841	3300031860	Soil	RGLGRTEIVINAHPTSLSFYLANGYREGEWRDAAPLPANLIRVGKRLS
Ga0318536_101517622	3300031893	Soil	TEIVINAHPTSLSFYLAHGYREGEWRDAAPVPANLIRVGKRLS
Ga0318522_101552662	3300031894	Soil	ARGLGRTEIVINAHPASLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0318551_101439891	3300031896	Soil	VINAHPTSLSFYLANGYREGEWHDARPVPANLIRVGKRLS
Ga0318551_109269851	3300031896	Soil	EHAARGLGRTEIVINAHPASLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0318520_102041622	3300031897	Soil	TARGLGRTEIVINAHPTSLSFYLAHGYREGEWRDAAPVPANLIRVGKRLS
Ga0306923_101622731	3300031910	Soil	IVINAHPTSLSFYLAHGYREGEWRDAAPVPANLIRVGKRLS
Ga0310916_111857602	3300031942	Soil	GRTEIVINAHPTSLGFYLTNGYREGEWSDVRPLPATLIRVGKRLP
Ga0310884_103188082	3300031944	Soil	RTMVIINAHPTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA
Ga0310913_107218251	3300031945	Soil	AEHAARGLGRTEIVINAHPTSLSFYLVNGYREGEWRDTKPVPANLIRVGKRLS
Ga0310910_100774371	3300031946	Soil	TEIVINAHPTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS
Ga0318530_104437242	3300031959	Soil	TEIVINAHPTSLSFYLASGYREGEWRDAGPVPANLIRVGKRLS
Ga0318531_104047661	3300031981	Soil	ARGLGRTEIVINAHPTSLSFYLANGYREGEWRDARPLPANLIRVAKRLS
Ga0318569_100684181	3300032010	Soil	VLLRLAEHAARGLGRTEIVINAHPTSLSFYLASGYREGEWRDAGPVPANLIRVGKRLS
Ga0310902_101335072	3300032012	Soil	EKAAHAFGRAMVIINAHPTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA
Ga0318545_101020402	3300032042	Soil	GRTEIVINAHPTSLSFYLAHGYREGEWRDAAPVPANLIRVGKRLS
Ga0318556_104102991	3300032043	Soil	AARGLGRTEIVINAHPTSLSFYLANGYREGEWRDTKPVPANLIRVGKRLS
Ga0318505_100178111	3300032060	Soil	IVINAHPTSLTFYLANGYREGEWRDAAPVPATLIRVGKRLP
Ga0318514_107490141	3300032066	Soil	INAHPTSLSFYLASGYREGEWRDAGPVPANLIRVGKRLS
Ga0318553_103095841	3300032068	Soil	VLLRLAEQAARDLGRTEIVINAHPTSLSFYLAHGYREGEWRDAAPVPANLIRVGKRLS
Ga0318553_105865281	3300032068	Soil	LLRLAEHAARGLGRTEIVINAHPTSLSFYLVNGYREGEWRDTKPVPANLIRVGKRLS
Ga0306924_116583382	3300032076	Soil	LKLGADAHPTSLTFYLANGYREGDWRDQGLVLTTLIRVGKRWR
Ga0315910_116255851	3300032144	Soil	ARACGRSDVVINAHPTSLTFYLANGYVRGDWADKGPVHPDLIRVGKRLR
Ga0318519_109688841	3300033290	Soil	GRTEIVINAHPASLSFYLANGYREGEWRDAKPVPANLIRVGKRLS
Ga0247829_100661584	3300033550	Soil	TEKAAHAFGRTMVVINAHSTSLTFYLANGYRTGDWHDAGPVPAGLIRVGKRLA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign