Metagenome / Metatranscriptome Family F049541

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F049541
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	60 residues
Representative Sequence	MAARRDPLFLIIAGAITALFLPFAIAFPPTSLEKLAAVAALVLVAAGISALILKLRRKSG
Number of Associated Samples	114
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.66 %
% of genes near scaffold ends (potentially truncated)	19.18 %
% of genes from short scaffolds (< 2000 bps)	80.82 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (85.616 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (29.452 % of family members)
Environment Ontology (ENVO)	Unclassified (46.575 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.219 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.68% β-sheet: 0.00% Coil/Unstructured: 44.32%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00378	ECH_1	9.59
PF00583	Acetyltransf_1	4.79
PF04909	Amidohydro_2	4.79
PF03033	Glyco_transf_28	4.79
PF04392	ABC_sub_bind	4.11
PF00149	Metallophos	4.11
PF03069	FmdA_AmdA	2.74
PF00520	Ion_trans	2.74
PF04101	Glyco_tran_28_C	2.05
PF12681	Glyoxalase_2	1.37
PF00326	Peptidase_S9	1.37
PF01544	CorA	1.37
PF01880	Desulfoferrodox	1.37
PF01551	Peptidase_M23	1.37
PF13620	CarboxypepD_reg	1.37
PF07799	DUF1643	1.37
PF08281	Sigma70_r4_2	1.37
PF12729	4HB_MCP_1	1.37
PF00211	Guanylate_cyc	1.37
PF00116	COX2	0.68
PF08123	DOT1	0.68
PF12840	HTH_20	0.68
PF09723	Zn-ribbon_8	0.68
PF17158	MASE4	0.68
PF13428	TPR_14	0.68
PF00528	BPD_transp_1	0.68
PF04542	Sigma70_r2	0.68
PF07859	Abhydrolase_3	0.68
PF03401	TctC	0.68
PF00072	Response_reg	0.68
PF12847	Methyltransf_18	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.11
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	2.74
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	1.37
COG2033	Desulfoferrodoxin, superoxide reductase-like (SORL) domain	Energy production and conversion [C]	1.37
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.37
COG4333	Uncharacterized conserved protein, DUF1643 domain	Function unknown [S]	1.37
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.68
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.68
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.68
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.68
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.68
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.68
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	0.68
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.62 %
Unclassified	root	N/A	14.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.62 %
Unclassified	root	N/A	14.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.62 %
Unclassified	root	N/A	14.38 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.85 %
Unclassified	root	N/A	14.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.48 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	18.49 %
Unclassified	root	N/A	14.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.38 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.85 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	6.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.11 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.11 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.74 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.37 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.11 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.11 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2.74 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.37 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.11 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.11 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	2.05 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	1.37 %
unclassified Methylibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.38 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	6.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.11 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.11 %
Variovorax sp. URHB0020	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	1.37 %
Mycolicibacterium moriokaense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	1.37 %
Variovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	0.68 %
Methylibium sp. YR605	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. YR605	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908008\|FWIREl_GJ4R3DH01D0LAP	Not Available	500	Open in IMG/M
3300000156\|NODE_c0744951	All Organisms → cellular organisms → Bacteria	21208	Open in IMG/M
3300001305\|C688J14111_10002423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5009	Open in IMG/M
3300001305\|C688J14111_10172333	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300001305\|C688J14111_10253040	Not Available	553	Open in IMG/M
3300001686\|C688J18823_10915327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	556	Open in IMG/M
3300002568\|C688J35102_120456192	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300002568\|C688J35102_120782269	All Organisms → cellular organisms → Bacteria → Proteobacteria	1565	Open in IMG/M
3300002568\|C688J35102_120890129	All Organisms → cellular organisms → Bacteria → Proteobacteria	2054	Open in IMG/M
3300002906\|JGI25614J43888_10048082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299	Open in IMG/M
3300002907\|JGI25613J43889_10001100	All Organisms → cellular organisms → Bacteria → Proteobacteria	6797	Open in IMG/M
3300003267\|soilL1_10002770	All Organisms → cellular organisms → Bacteria → Proteobacteria	2893	Open in IMG/M
3300003319\|soilL2_10018868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8452	Open in IMG/M
3300004081\|Ga0063454_100022721	All Organisms → cellular organisms → Bacteria → Proteobacteria	2031	Open in IMG/M
3300004114\|Ga0062593_100036227	All Organisms → cellular organisms → Bacteria	2891	Open in IMG/M
3300004114\|Ga0062593_100973707	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300004153\|Ga0063455_100479761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	766	Open in IMG/M
3300005171\|Ga0066677_10066630	All Organisms → cellular organisms → Bacteria → Proteobacteria	1839	Open in IMG/M
3300005171\|Ga0066677_10830076	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005172\|Ga0066683_10231180	All Organisms → cellular organisms → Bacteria → Proteobacteria	1145	Open in IMG/M
3300005175\|Ga0066673_10771883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	551	Open in IMG/M
3300005176\|Ga0066679_10202726	All Organisms → cellular organisms → Bacteria → Proteobacteria	1265	Open in IMG/M
3300005176\|Ga0066679_10368538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	940	Open in IMG/M
3300005176\|Ga0066679_11044984	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005177\|Ga0066690_10052987	All Organisms → cellular organisms → Bacteria → Proteobacteria	2481	Open in IMG/M
3300005177\|Ga0066690_10527987	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300005179\|Ga0066684_10179395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1360	Open in IMG/M
3300005181\|Ga0066678_10213458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1236	Open in IMG/M
3300005181\|Ga0066678_10384514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	929	Open in IMG/M
3300005184\|Ga0066671_10146927	All Organisms → cellular organisms → Bacteria → Proteobacteria	1369	Open in IMG/M
3300005187\|Ga0066675_10670741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	779	Open in IMG/M
3300005187\|Ga0066675_10976910	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300005340\|Ga0070689_100345371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1247	Open in IMG/M
3300005406\|Ga0070703_10467414	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005434\|Ga0070709_10771987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300005436\|Ga0070713_100123492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2274	Open in IMG/M
3300005438\|Ga0070701_10055678	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300005440\|Ga0070705_100008284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	5147	Open in IMG/M
3300005440\|Ga0070705_101138129	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300005441\|Ga0070700_100649094	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300005444\|Ga0070694_100295822	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300005444\|Ga0070694_101045854	Not Available	679	Open in IMG/M
3300005447\|Ga0066689_10652797	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300005450\|Ga0066682_10162473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1425	Open in IMG/M
3300005454\|Ga0066687_10112819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	1389	Open in IMG/M
3300005454\|Ga0066687_10272117	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300005454\|Ga0066687_10327092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	874	Open in IMG/M
3300005468\|Ga0070707_100534088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1135	Open in IMG/M
3300005518\|Ga0070699_100017375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6175	Open in IMG/M
3300005526\|Ga0073909_10129215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium moriokaense	1032	Open in IMG/M
3300005529\|Ga0070741_10290450	All Organisms → cellular organisms → Bacteria → Proteobacteria	1538	Open in IMG/M
3300005536\|Ga0070697_101834371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300005540\|Ga0066697_10132484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1467	Open in IMG/M
3300005544\|Ga0070686_101946159	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005546\|Ga0070696_100009505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. URHB0020	6509	Open in IMG/M
3300005546\|Ga0070696_100042558	All Organisms → cellular organisms → Bacteria → Proteobacteria	3140	Open in IMG/M
3300005546\|Ga0070696_101950381	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005552\|Ga0066701_10118072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1568	Open in IMG/M
3300005555\|Ga0066692_10405157	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300005556\|Ga0066707_10333399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	992	Open in IMG/M
3300005557\|Ga0066704_10593410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	714	Open in IMG/M
3300005559\|Ga0066700_10071888	All Organisms → cellular organisms → Bacteria	2196	Open in IMG/M
3300005559\|Ga0066700_10483730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	866	Open in IMG/M
3300005559\|Ga0066700_10567279	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300005559\|Ga0066700_11115926	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005561\|Ga0066699_10828373	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300005561\|Ga0066699_11043965	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005569\|Ga0066705_10767604	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300005574\|Ga0066694_10328259	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300005575\|Ga0066702_10030545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. YR605	2752	Open in IMG/M
3300005985\|Ga0081539_10160758	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300006032\|Ga0066696_10744297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	628	Open in IMG/M
3300006046\|Ga0066652_100008043	All Organisms → cellular organisms → Bacteria → Proteobacteria	6513	Open in IMG/M
3300006046\|Ga0066652_100117803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2173	Open in IMG/M
3300006046\|Ga0066652_102003384	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006755\|Ga0079222_11696329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300006796\|Ga0066665_10179100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1630	Open in IMG/M
3300006797\|Ga0066659_11093046	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300006800\|Ga0066660_10944408	Not Available	698	Open in IMG/M
3300006806\|Ga0079220_10693551	Not Available	746	Open in IMG/M
3300006903\|Ga0075426_10547081	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300006914\|Ga0075436_100232226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1311	Open in IMG/M
3300006914\|Ga0075436_100627777	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300007076\|Ga0075435_100931999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	758	Open in IMG/M
3300009012\|Ga0066710_100098578	All Organisms → cellular organisms → Bacteria → Proteobacteria	3898	Open in IMG/M
3300009137\|Ga0066709_100562838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1617	Open in IMG/M
3300009137\|Ga0066709_103152027	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300009143\|Ga0099792_10451587	Not Available	796	Open in IMG/M
3300010329\|Ga0134111_10540516	Not Available	516	Open in IMG/M
3300010401\|Ga0134121_11939243	Not Available	619	Open in IMG/M
3300011106\|Ga0151489_1577223	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300012096\|Ga0137389_11103016	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300012189\|Ga0137388_10737289	Not Available	914	Open in IMG/M
3300012202\|Ga0137363_10561841	Not Available	961	Open in IMG/M
3300012203\|Ga0137399_10310253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1305	Open in IMG/M
3300012212\|Ga0150985_111600422	Not Available	917	Open in IMG/M
3300012285\|Ga0137370_10226649	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300012362\|Ga0137361_10130875	All Organisms → cellular organisms → Bacteria → Proteobacteria	2222	Open in IMG/M
3300012685\|Ga0137397_10933795	Not Available	642	Open in IMG/M
3300012685\|Ga0137397_11144618	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300012918\|Ga0137396_10027375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3736	Open in IMG/M
3300012918\|Ga0137396_10738906	Not Available	725	Open in IMG/M
3300012922\|Ga0137394_10086345	All Organisms → cellular organisms → Bacteria → Proteobacteria	2630	Open in IMG/M
3300012922\|Ga0137394_10253530	All Organisms → cellular organisms → Bacteria → Proteobacteria	1504	Open in IMG/M
3300012925\|Ga0137419_10085251	All Organisms → cellular organisms → Bacteria → Proteobacteria	2148	Open in IMG/M
3300012927\|Ga0137416_10495612	All Organisms → cellular organisms → Bacteria → Proteobacteria	1051	Open in IMG/M
3300012929\|Ga0137404_10000268	All Organisms → cellular organisms → Bacteria → Proteobacteria	33749	Open in IMG/M
3300012930\|Ga0137407_10866745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	854	Open in IMG/M
3300012944\|Ga0137410_10222814	Not Available	1468	Open in IMG/M
3300012944\|Ga0137410_10477961	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300012944\|Ga0137410_11663305	Not Available	561	Open in IMG/M
3300014166\|Ga0134079_10036805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1668	Open in IMG/M
3300015241\|Ga0137418_11151091	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300015371\|Ga0132258_10207794	All Organisms → cellular organisms → Bacteria → Proteobacteria	4753	Open in IMG/M
3300015371\|Ga0132258_13086804	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300015372\|Ga0132256_101012224	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300018060\|Ga0187765_10915634	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300018431\|Ga0066655_11233378	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300018433\|Ga0066667_10669534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	869	Open in IMG/M
3300018468\|Ga0066662_10667728	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300018482\|Ga0066669_10218540	All Organisms → cellular organisms → Bacteria → Proteobacteria	1477	Open in IMG/M
3300018482\|Ga0066669_11511066	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300019789\|Ga0137408_1155204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1021	Open in IMG/M
3300025917\|Ga0207660_10512667	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300025928\|Ga0207700_10938469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300025931\|Ga0207644_10682702	Not Available	856	Open in IMG/M
3300025939\|Ga0207665_10328477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1149	Open in IMG/M
3300026075\|Ga0207708_10769901	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300026118\|Ga0207675_101600268	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300026300\|Ga0209027_1221836	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300026304\|Ga0209240_1081739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1189	Open in IMG/M
3300026315\|Ga0209686_1076885	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300026318\|Ga0209471_1184514	All Organisms → cellular organisms → Bacteria → Proteobacteria	816	Open in IMG/M
3300026319\|Ga0209647_1254714	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300026320\|Ga0209131_1017071	All Organisms → cellular organisms → Bacteria → Proteobacteria	4415	Open in IMG/M
3300026326\|Ga0209801_1286704	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300026335\|Ga0209804_1112940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1239	Open in IMG/M
3300026542\|Ga0209805_1346396	Not Available	565	Open in IMG/M
3300026550\|Ga0209474_10312774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	913	Open in IMG/M
3300028592\|Ga0247822_11617271	Not Available	550	Open in IMG/M
3300030496\|Ga0268240_10169594	Not Available	546	Open in IMG/M
3300031538\|Ga0310888_10267571	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300031740\|Ga0307468_100141319	Not Available	1526	Open in IMG/M
3300031854\|Ga0310904_10882339	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300032180\|Ga0307471_100345496	All Organisms → cellular organisms → Bacteria → Proteobacteria	1596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.78%
Host-Associated	Host-Associated	7.53%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.10%
Plants	Host-Associated → Plants	7.53%
Aquatic	Environmental → Aquatic	0.68%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.42%
Freshwater	Environmental → Aquatic → Freshwater	0.68%
Grass	Engineered → Solid Waste → Grass	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.12%
Loam	Environmental → Terrestrial → Soil → Loam	23.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.37%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.37%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Composting	Engineered → Solid Waste → Grass → Composting	0.68%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	39.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	8.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	8.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.37%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.37%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.37%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.37%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIREl_01588790	2124908008	Soil	MKERDQTFLIIAGAITALFLPFTIAFPPTLLLKVAATGALILVACGASALILRLRKKR
NODE_074495126	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MAERRDPLFLIIAGAITALFLPFAIAFPPGFIAKLAAVALLIVIAAAIAALILRLRRRK*
C688J14111_100024236	3300001305	Soil	MFLIVAGAITALFLPFAIAFPPTLFAKAGAVALLVVIAAAISALVRRLRK*
C688J14111_101723331	3300001305	Soil	MFLIVAGAITALFLPFAIAFPPTLVAKASAVALLVVIASAISALV
C688J14111_102530402	3300001305	Soil	MAGPKPRNATFLVLAGAITALFLPFALAFPPTLLQKLIATAALVAGACGVAALVMRSRRK
C688J18823_109153271	3300001686	Soil	GRNYPDLRQCRMAERRDPLFLIIAGAITALFLPFAIAFPPTFIAKLAAVAALLLVAAGISALILKLRKKSGSGTN*
C688J35102_1204561922	3300002568	Soil	MFLIVAGAITALFLPFAIAFPPTLVAKASAVALLVVIASAISALVRRLRK*
C688J35102_1207822692	3300002568	Soil	VLYRAHMAGPKPRNATFLVLAGAITALFLPFALAFPPTLLQKLIATAALVAGACGVAALVMRSRRK*
C688J35102_1208901292	3300002568	Soil	MARDKTFLMIAGAVTAFFLPFALAFPPSLLEKLIATAALVAVACGIAALVIHLRRK*
JGI25614J43888_100480823	3300002906	Grasslands Soil	MTNAPKRDPMFLIIAGAITALFLPFALAFPPTLLGKLGAMVALVLVAAGVSALILKLRRKP*
JGI25613J43889_100011005	3300002907	Grasslands Soil	MTNATKRDPMFLIIAGAITALFLPFALAFPPTLLGKLGAMVALVLVAAGVSALILKLRRKP*
soilL1_100027702	3300003267	Sugarcane Root And Bulk Soil	MTSSPPRDRTFLIVAGAVTALFLPFALAFPPSLLAKLTATAALVALACGVAAIVVRLRRK
soilL2_100188683	3300003319	Sugarcane Root And Bulk Soil	MFLIVAGAITALFLPFAIAFPPSPLAKAGAVAVLVLVAAGISALVRRLRK*
Ga0063454_1000227212	3300004081	Soil	MGEERPSDRQMFLIVAGAITALFLPFAIAFPPTLFAKAGAVALLVVIAAAISALVRRLRK
Ga0062593_1000362273	3300004114	Soil	VKRDPMFLIVAGAITALFLPFALAFPPGLALKAAAVVALMLAAAGISALVQRLRGRK*
Ga0062593_1009737072	3300004114	Soil	MPRPQPRDRTFLIVAGAVTALFLPFALAFPPSLLAKLMTTAVLVALACGVAAIVVRRRK*
Ga0063455_1004797611	3300004153	Soil	MNQTLLIITGAITALFLPFAIAFPRTLLEKLLAVAALVAVAAGIAALVIKLRRK*
Ga0066677_100666303	3300005171	Soil	MAARSDPLFLIIAGAITALFLPFAIAFPPTFMEKVAAVVLLLLIAAGVSALILRLRRK*
Ga0066677_108300762	3300005171	Soil	MALKHPQGDRMFLIVAGAIVALFLPFALAFPPGLPAKLAAVVALVLAAAGISALAVKLRRRK*
Ga0066683_102311802	3300005172	Soil	MTDAPKPRDPMFLIIAGTITALFLPFAIAFPPSLLEKAGAVVALMLVAAGISALVVKLRRQK*
Ga0066673_107718832	3300005175	Soil	MTGAPKPRDPLFLIIAGAITALFLPFALAFPPSLLEKLVAVVALVLAAASVSALVMRLRRRK*
Ga0066679_102027262	3300005176	Soil	MTDAPKPRDPMFLIIAGAITAIFMPFALAFPPTLLEKLAAVAALVLAAAGVSALVMKLRKKSG*
Ga0066679_103685382	3300005176	Soil	VERKRADPMFLIIAGAITALFLPFAIAYPPTLIAKAGAVALLVIVAAAISALVRRLRK*
Ga0066679_110449841	3300005176	Soil	MAARSDPLFLIIAGAITALFLPFAIAFPPTFMEKVAAVVLLLLIAAGVAALILRLRRK*
Ga0066690_100529872	3300005177	Soil	MPISDWRQFSMAARRDPLFLIIAGAITALFLPFAIAFPPTFMEKVAAVVLLLLIAAGVSALILRLRRK*
Ga0066690_105279872	3300005177	Soil	FLIIAGAITALFLPFAIAYPPTLIAKAGAVALLVIVAAAISALVLQLRK*
Ga0066684_101793952	3300005179	Soil	MFLIIAGAITALFLPFALAFPPSLLEKAAAVGALVLISVGISALAVKLRRK*
Ga0066678_102134583	3300005181	Soil	MTDTPKPRDPMFLIIAGAITALFLPFALAFPPSLLEKAGAVVALMLVAAGISALVVKLRRQK*
Ga0066678_103845142	3300005181	Soil	MSSIPRDPLFLIIAGAITALFLPFALAFPPSLLEKAAAVGALVLVAVGVSALAVKLRRK*
Ga0066671_101469272	3300005184	Soil	MTGAPKPRDPLFLIIAGAITAIFLPFALAFPPSLLEKLVAVVALLLAAAGASALVMRLRRRK*
Ga0066675_106707412	3300005187	Soil	MAGQKQPRDPLFLIIAGAITALLLPFAIAFPPTFLAKMAAVALLVLVAAGISALILRLRRRR*
Ga0066675_109769101	3300005187	Soil	MSSIPRDPLFLIIAGAITALLLPFALAFPPSLLEKAAAVGALVLVAMGISALAVKLRRK*
Ga0070689_1003453712	3300005340	Switchgrass Rhizosphere	VTKDRTFPIIAGAVTALFLPFALAFPPTLLEKLLATAALIAVACGIAALVMRFRRK*
Ga0070703_104674141	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MAARRDPLFLIIAGAITALFLPFAIAFPPTSLEKLAAVAALVLVAAGISALILKLRRKSG
Ga0070709_107719872	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPRDPMFLIIAGAITAIFLPFALAFPRTLAEKAGAVALLVALAAGISALILRVRRKK*
Ga0070713_1001234922	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPRDPMFLIIAGAITAIFLPFALAFPRTLAEKAGAVALLVALAAGISALILRLRRKK*
Ga0070701_100556782	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VKRDPMFLIVAGAITALFLPFALAFPPGLALKAAAVAALMLVAAGIGALVQRLRRGKR*
Ga0070705_1000082843	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAARRDPLFLIIAGAITALFLPFAIAFPPTSLEKLAAVAALVLVAAGISALILKLRRKSGTGT*
Ga0070705_1011381292	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	IIAGAITAIFLPFAIAFPPTLLQKLAAIAALVLAAAGAAALILRLRRKSGSGTD*
Ga0070700_1006490942	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VKRDPMFLIVAGAITALFLPFAIAFPPSLALKAAAVVALMLVAAGISALVQKLRRRK*
Ga0070694_1002958222	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MGTDPFKRDPMFLIIAGAITAIFLPFAIAFPPTLLQKLAAIAALVLAAAGAAALILRLRRKSGSGTD*
Ga0070694_1010458541	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MFLIVAGAITALFLPFALAFPRTLIEKLAAVVLLILIAAGMSALVLRLRRRK*
Ga0066689_106527972	3300005447	Soil	MTDTPKPRDPMFLIIAGAITAIFLPFAIAFPPSLLEKAGAVVALMLVAAGISALVMKLRRQK*
Ga0066682_101624732	3300005450	Soil	MTGAPKPRDPMFLIIAGAITAIFLPFAIAFPPSLLEKAGAVVALMLVAAGISALVVKLRRQK*
Ga0066687_101128191	3300005454	Soil	LGTERPSEKQTFLIIAGAITALFLPFALAFPPTLIAKAGAVALLVIVAAAISALV
Ga0066687_102721172	3300005454	Soil	MSGERKRADPMFLIIAGAITALFLPFAIAFPPTLIAKAGAVALLVIVAAAISALIRRLRK
Ga0066687_103270922	3300005454	Soil	MGEERPSDRQMFLIVAGAITALFLPFAIAFPPTLLAKAGAVALLVAIAAAISALVRRLRK
Ga0070707_1005340882	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPIFMAARRDPLFLIIAGAITALFLPFAIAFPPTSLEKLAAVAALVLVAAGISALILKLRRKSGTGT*
Ga0070699_1000173757	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MADARPPRDPMFLIIAGAITALFLPFAVAFPPTLVLKAVAIAALVLAAAGASAVVLRLRRRK*
Ga0073909_101292152	3300005526	Surface Soil	MFLIVAGAITALFLPFAIAFPPTLLAKAGAVAALVLVAAAISALVRRLRK*
Ga0070741_102904502	3300005529	Surface Soil	MAARRDPLFLIIAGAITALFLPFAIAFPPTSLEKLAAVAALVLVAAGISALILKLRGKSGTGT*
Ga0070697_1018343712	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPRDPMFLIIAGAITAIFLPFALAFPRTLAEKAGAVALLVALACGISALILRLRRKK*
Ga0066697_101324841	3300005540	Soil	MAARRDPLFLIIAGAITALFLPFAIAFPPAFIEKVAAVVLLLLIAAGVSALILRLRRK*
Ga0070686_1019461591	3300005544	Switchgrass Rhizosphere	VSAPEVAGPKRDRMFLIVAGAITALFLPFAIAFPPTLLDKVLAIIALMAGASAISALVLRLRKSK*
Ga0070696_1000095059	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	IFMAARRDPLFLIIAGAITALFLPFAIAFPPTSLEKLAAVAALVLVAAGISALILKLRRKSGTGT*
Ga0070696_1000425581	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MFLIVAGAITALFLPFALAFPPGLALKAAAVAALMLVAAGIGALVQRLRRGKR*
Ga0070696_1019503811	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGEERPSERQMFLIVAGAITALFLPFAIAFPPTLLAKAGAVAALVLVAAA
Ga0066701_101180722	3300005552	Soil	MTGAPKPRDPLFLIIAGAITALFLPFALAFPPSLLEKAAAVGALVLIAVGISALAVKLRRK*
Ga0066692_104051571	3300005555	Soil	MTGAPKPRDPLFLIIAGAITAIFLPFAVAFPPSLLEKAAAVVLLILVAAGISA
Ga0066707_103333993	3300005556	Soil	MTDTPKPRDPMFLIIAGAITAIFLPFAVAFPPSLLEKAAAVVLLILVAAGISALVMRLRRRK*
Ga0066704_105934101	3300005557	Soil	SMAARSDPLFLIIAGAITALFLPFAIAFPPTFMEKVAAVVLLLLIAAGVSALILRLRRK*
Ga0066700_100718884	3300005559	Soil	MFLIIAGAITALFLPFALAFPPSLLEKAGAVVALMLVAAGISALVVKLR
Ga0066700_104837302	3300005559	Soil	MAARSDPLFLIIAGAITALFLPFAIAFPPTFMEKVAAVVLLLLIAAGVSALI
Ga0066700_105672792	3300005559	Soil	MTGAPKPRDPMFLIIAGAITAIFLPFAIAFPPSLLEKAGAVVALMLVAAGISALVMKLRRQK*
Ga0066700_111159262	3300005559	Soil	IIAGAITALFLPFALAFPPSLLEKAAAVGALVLIAVGISALAVKLRRK*
Ga0066699_108283732	3300005561	Soil	MFLIIAGAITAIFLPFAIAFPPSLLEKAGAVVALMLVAAGISALVMKLRRQK*
Ga0066699_110439652	3300005561	Soil	MSGERKRADPMFLIIAGAITALFLPFAIAYPPTLIAKAGAVALLVIVAAAISALVRRLRK
Ga0066705_107676041	3300005569	Soil	MSSIPRDPLFLIIAGAITALFLPFALAFPPSLLEKLVAVVALLLAAAGASALVMRLRRRK
Ga0066694_103282592	3300005574	Soil	MTGTPKPRDPMFLIIAGAITALFLPFALAFPPSLLEKAGAVVALMLVAAGISALVVKLRRQK*
Ga0066702_100305452	3300005575	Soil	MPISDWQQFSMAARRDPLFLIIAGAITALFLPFAIAFPPTFMEKVAAVVLLLLIAAGVSALILRLRRK*
Ga0081539_101607583	3300005985	Tabebuia Heterophylla Rhizosphere	VAPRRDQTFLIIAGAVTALFLPFSLAFPPTLVDKLVATAALVALACGVAALVVRLRRK*
Ga0066696_107442972	3300006032	Soil	MAARRDPLFLIIAGAITALFLPFAIAFPPTFIEKVAAVVLLLLIAAGVSALILRLRK*
Ga0066652_1000080438	3300006046	Soil	MNQTFLIITGAITALFLPFAIAFPRTLLEKLLAVAALVAVAAGIAALVIKLRRK*
Ga0066652_1001178034	3300006046	Soil	VEREVKQTFLIIAGAITALFLPFTLAFPPTLLLKVAATAALMLVASGAAALILKFRKKDR
Ga0066652_1020033842	3300006046	Soil	VKRDPMFLIIAGAITALFLPFAIAFPQGLALKAAAVVVLMLVAAGISALVVRLRKRK*
Ga0079222_116963292	3300006755	Agricultural Soil	MADPRQRRDPMFLIIAGAITAIFLPFALAFPRTLAEKVGAVALLVAVASGISALALRLRRKK*
Ga0066665_101791001	3300006796	Soil	MFLIIAGAITAIFLPFAVAFPPSLLEKAAAVVLLILVAAGISALVMRLPRRK
Ga0066659_110930462	3300006797	Soil	VEREVKQTFLIIAGAITALFLPFTLAFPSTLLLKLAATAALVLVACGASALIIKLRKKS*
Ga0066660_109444082	3300006800	Soil	VEREVQQTFLIIAGAITALFLPFTLAFPPTLLLKLAATAALVLVACGASALILRFRKKS*
Ga0079220_106935513	3300006806	Agricultural Soil	MADPRQRRDPMFLIIAGAITAIFLPFALAFPRTLAEKAGAVALLVALAAGISALVLRLRRKK*
Ga0075426_105470812	3300006903	Populus Rhizosphere	MAGPRDPMFLIIAGAITALFLPFAIALPPTLALKLGAVVALLIVASGISALALKLRRRK*
Ga0075436_1002322264	3300006914	Populus Rhizosphere	LAERRDPLFLIIAGAITALFLPFALAFPRTLIEKLAAVVLLILIAAGMSALVLRLRRRK*
Ga0075436_1006277772	3300006914	Populus Rhizosphere	AECGMAGPRDPMFLIIAGAITALFLPFAIALPPTLALKLGAVVALLIVASGISALALKLRRRK*
Ga0075435_1009319992	3300007076	Populus Rhizosphere	DVPIFMAARRDPLFLIIAGAITALFLPFAIAFPPTSLEKLAAVAALVLVAAGISALILKLRRKSGTGT*
Ga0066710_1000985786	3300009012	Grasslands Soil	MTDTPKPRDPMFLIIAGAITALFLPFALAFPPSLLEKAGAVVALMLVAAGISALVVKLRRQK
Ga0066709_1005628383	3300009137	Grasslands Soil	MFLIIAGAITALFLPFALAFPPSLLEKAGAVVALMLVAAGISALVVKLRRQK*
Ga0066709_1031520271	3300009137	Grasslands Soil	MTDAPKPRDPLFLIIAGAITAIFLPFAIAFPPSLLEKAGAVVALMLVGAGISARVMKPRRAQ*
Ga0099792_104515873	3300009143	Vadose Zone Soil	MTNATKRDPMFLIIAGAITALFLLFALAFPPTLLGKLGAMVALVLVAAGVSALILKLRRKP*
Ga0134111_105405162	3300010329	Grasslands Soil	MTGQPKPRDPMFLIIAGAITAIFLPFAIAFPPSLLEKAGAVVALMLVAGGISALVMKLRRQK*
Ga0134121_119392432	3300010401	Terrestrial Soil	MFLIIAGAITAIFLPFAIAFPPTLLQKLAAIAALVLAAAGAAALILRLRRKSGSGTD*
Ga0151489_15772232	3300011106	Soil	MFLIIAGAITALFLPFALAFPPTLVGKLAAMAALVLVAAGIAALVVRLRKKSG*
Ga0137389_111030161	3300012096	Vadose Zone Soil	MTGEPKPRDPMFLIIAGAITAIFLPFALAFPPSLVEKLAAVVLLILVAAGISALVMRLRRRK*
Ga0137388_107372892	3300012189	Vadose Zone Soil	MFLIIAGAITAIFLPFALAFPPSLVEKLAAVVLLILVAAGISALVMRLRRRK*
Ga0137363_105618413	3300012202	Vadose Zone Soil	MTGAPKQRDPMFLIVAGTITAVFLPFALAFPPTLLEKLAAVAALILVAAGVSALVVKLRTKSG*
Ga0137399_103102533	3300012203	Vadose Zone Soil	MTDAPKRRDPRFLIIAGAITAVFLPFAVAFPPTLLEKMAAIAALVLVAAGISAVAVRLRRKSGPGTE*
Ga0150985_1116004222	3300012212	Avena Fatua Rhizosphere	RAVSVEEMAEERSSDRQMFLIVAGAITALFLPFAIAFPPTLFAKAGAVALLVVIAAAISALVRRLRK*
Ga0137370_102266492	3300012285	Vadose Zone Soil	MTGTPKPRDPMFLIIAGAITALFLPFAVAFPPSLLEKAGAVVALMLVAAGISALVVKLRRQK*
Ga0137361_101308756	3300012362	Vadose Zone Soil	MTGAPKQRDPMFLIVAGTITAVFLPFALAFPPTLLEKLAAVAALILVAAGVSALVVKLRKKSG*
Ga0137397_109337951	3300012685	Vadose Zone Soil	MSSIPQESRFLIIAGAITAFFLPFALAFPPTLIDKLVALIALMLVAAGIAALIIKLRRKDPEEPGPGS*
Ga0137397_111446182	3300012685	Vadose Zone Soil	MEREVKQTFLIIAGAITALFLPFTLAFPPTLLLKVAATAALMLVASGAAALILKFRKKS*
Ga0137396_100273754	3300012918	Vadose Zone Soil	MTDAPKRRDPRFLMIAGAITAVFLPFAVAFPPTLLEKMAAIAVLVLVAAGISAVAVRLRRKSGPGTE*
Ga0137396_107389062	3300012918	Vadose Zone Soil	MFLIIAGAITAIFMPFALAFPPTLLEKLAAVAALVLVAAGVSALVMKLRKKSG*
Ga0137394_100863455	3300012922	Vadose Zone Soil	MTDAPKPRDPMFLIIAGALTAIFMPFALAFPPTLLEKLAAVAALVLVAAGVSALVMKLRKKSG*
Ga0137394_102535302	3300012922	Vadose Zone Soil	MFLIIAGAITALFLPFALAFPPSLVEKLAAVVLLILVAAGISAVAIKLRKKSRSSTDIRR
Ga0137419_100852512	3300012925	Vadose Zone Soil	MTDAPKRRDPRFLMIAGAITAVFLPFAVAFPPTLLEKMAAIAALVLVAAGISAVAVRLRRKSGSGTE*
Ga0137416_104956122	3300012927	Vadose Zone Soil	MTDAPKRRDPRFLMIAGAITAVFLPFAVAFPPTLLEKMAAIAALVLVAAGISAVAIRLRRKSGSGTE*
Ga0137404_1000026811	3300012929	Vadose Zone Soil	MEREVKQTFLIIAGAITALFLPFTLAFPPTLLLKVAATAALMLVASGAAALILKFRKKDR
Ga0137407_108667451	3300012930	Vadose Zone Soil	MQEKTTKLLIVAGAITAAGLPFAIAFPRSLLEKMLAVAALVLAALGVAFLVRKK*
Ga0137410_102228143	3300012944	Vadose Zone Soil	MTDAPKPRDPMFLIIAGAITAIFMPFALAFPPTLLEKLAAVAALVLVAAGVSALVMKLRKKSG*
Ga0137410_104779611	3300012944	Vadose Zone Soil	MTDAPKRRDPRFLIIAGAITAVFLPFAVAFPPTLLEKMAAIAVLVLVAAGISAVAVRLRRKSGPGTE*
Ga0137410_116633052	3300012944	Vadose Zone Soil	FLIIAGAITAVFLPFAVAFPPTLLEKMAAIAALVLVAAGISAVAVRLRRKSGSGTE*
Ga0134079_100368054	3300014166	Grasslands Soil	MGEERPSDRQMFLIVAGAITALFMPFAIAFPPTLLAKAGAVALLVAIAAAISALVR
Ga0137418_111510912	3300015241	Vadose Zone Soil	MTDAPKPRDPMFLIIAGAITAIFMPFALAFPPTLLEKLAAVAALVLAAAGVSALVM
Ga0132258_102077943	3300015371	Arabidopsis Rhizosphere	MPPSQPRRARFLIIAGAVTALFLPFALAFPPSLPEKLLAAAALVGVACGIAAIAVRLKK*
Ga0132258_130868042	3300015371	Arabidopsis Rhizosphere	MFLIIAGAITAIFLPFAIAFPPTLLQKLVAIAALVLAAAGAAALILRLRRKSGSGTD*
Ga0132256_1010122242	3300015372	Arabidopsis Rhizosphere	MPPSQPRRARFLIIAGAVTALFLPFALAFPPSLPENLLAAAALVGVACGIAAIAVRLKK*
Ga0187765_109156342	3300018060	Tropical Peatland	RALDGFLPVRVSTGEPPRKTDPMFFIVAGALTALFLPFALAFPQGYPAKLAAVAALVLCAAGISALLMRLRRRKP
Ga0066655_112333782	3300018431	Grasslands Soil	MKERQQTFLIIAGAITALFLPFAIAFPPTYIAKLAAVALLILGAAGVAALILRLRGRK
Ga0066667_106695342	3300018433	Grasslands Soil	MAGQKQPRDPLFLIIAGAITALLLPFAIAFPPTFLAKMAAVALLVLVAAGISALILRLRRRR
Ga0066662_106677281	3300018468	Grasslands Soil	RRAVSVGATALAKERPSDKQTFLIIAGAITALFLPFALAFPPTLIAKAGALALLVIVAAAISALVRRLRK
Ga0066669_102185401	3300018482	Grasslands Soil	MSGERKRADPMFLIIAGAITALFLPFAIAFPPTLIAKAGAVALLVIVAAAISALVRRLRK
Ga0066669_115110661	3300018482	Grasslands Soil	MAEPKPRDATFLIIAGALTALFLPFALAFPPSLLEKLIATAALVAVACGIAALVVRLRRK
Ga0137408_11552044	3300019789	Vadose Zone Soil	MQEKTTKLLIVAGAITAAGLPFAIAFPRSLLEKMLAVAALVLAALGVAFLVRKK
Ga0210377_100401343	3300021090	Groundwater Sediment	MQEKTQKFLIVAGAITAAGLPFALAFPETLLEKLLAVTALVLAAAGISAALGGLRKKQ
Ga0207660_105126671	3300025917	Corn Rhizosphere	AITALFLPFALAFPPGLALKAAAVVALMLAAAGISALVQRLRRGKR
Ga0207700_109384691	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPRDPMFLIIAGAITAIFLPFALAFPRTLAEKAGAVALLVALAAGISALILRLRRKK
Ga0207644_106827021	3300025931	Switchgrass Rhizosphere	MPRPQPRDRTFLIVAGAVTALFLPFALAFPPSLLAKLMTTAVLVALACGVAAIVVRRRK
Ga0207665_103284771	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPQPRDPMFLIIAGAITAIFLPFALAFPRTLAEKAGAVALLVALACGISALILRLRRKK
Ga0207708_107699012	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VKRDPMFLIVAGAITALFLPFAIAFPPSLALKAAAVVALMLVAAGISALVQKLRRRK
Ga0207675_1016002682	3300026118	Switchgrass Rhizosphere	MPARKPRDATFLIVAGAITALFLPFALAFPPSLLEKLIATAALVGVACAVAALVVRARRK
Ga0209027_12218362	3300026300	Grasslands Soil	VERKRADPMFLIIAGAITALFLPFAIAYPPTLIAKAGAVALLVIVAAAISALVLQLRK
Ga0209240_10817391	3300026304	Grasslands Soil	MTNAPKRDPMFLIIAGAITALFLPFALAFPPTLLGKLGAMVALVLVAAGVSALILKLRRK
Ga0209686_10768852	3300026315	Soil	MAARSDPLFLIIAGAITALFLPFAIAFPPTFMEKVAAVVLLLLIAAGVSALILRLRRK
Ga0209471_11845142	3300026318	Soil	MTDAPKPRDPMFLIIAGALTAIFMPFALAFPPTLLEKLAAVAALVLAAAGVSALVMKLRKKSG
Ga0209647_12547142	3300026319	Grasslands Soil	MEREVKQTFLIIAGAITALFLPFTLAFPPTLLLKVGATGALILVASGAAALILKFRKKS
Ga0209131_10170716	3300026320	Grasslands Soil	MTNATKRDPMFLIIAGAITALFLPFALAFPPTLLGKLGAMVALVLVAAGVSALILKLRRK
Ga0209801_12867042	3300026326	Soil	MSSIPRDPLFLIIAGAITALFLPFALAFPPSLLEKAAAVGALVLVAVGVSALAVKLRRK
Ga0209804_11129403	3300026335	Soil	SDWQQFSMAARRDPLFLIIAGAITALFLPFAIAFPPTFMEKVAAVVLLLLIAAGVSALILRLRRK
Ga0209805_13463962	3300026542	Soil	MFLIIAGAITAIFLPFAIAFPPSLLEKAGAVVALMLVAAGISALVMKLRRQK
Ga0209474_103127742	3300026550	Soil	MTGAPKPRDPLFLIIAGAITAIFLPFALAFPPSLLEKLVAVVALLLAAAGASALVMRLRRRK
Ga0247822_116172711	3300028592	Soil	MPARKPRDATFLIVAGAITALFLPFALAFPRSLLEKLIATAALVGVACAVAALVVRARRK
Ga0268240_101695942	3300030496	Soil	MARPRDASFLIIAGAVTALFLPFAIAFPPTLLEKAIAVAILVAVACGIAALVLRLKRK
Ga0310888_102675712	3300031538	Soil	MPPSQPRRARFLIIAGAVTALFLPFALAFPPSLPEKLLAAAALVGVACGIAAIAVRLKK
Ga0307468_1001413191	3300031740	Hardwood Forest Soil	EDYSASSMTDARKPRDPMFLIIAGTITAIFLPFALAFPPTLPQKLAAVAALVLAAAGAAALIMRLRRKSGSGTDIRR
Ga0310904_108823392	3300031854	Soil	MPARKPRDATFLIVAGAITALFLPFALAFPPSLLEKLIATAALVAVACAVAALVARARRK
Ga0307471_1003454962	3300032180	Hardwood Forest Soil	MTDARKPRDPMFLIIAGTITAIFLPFALAFPPTLLQKLAAVAALVLAAAGAAALIMRLRRKSGSGTDIRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049541

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences