Metagenome / Metatranscriptome Family F049536

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F049536
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	88 residues
Representative Sequence	ADTGIASALGKPATPRNDMAAVQLLAREMLTGTKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Number of Associated Samples	120
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.05 %
% of genes near scaffold ends (potentially truncated)	97.26 %
% of genes from short scaffolds (< 2000 bps)	86.99 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.973 % of family members)
Environment Ontology (ENVO)	Unclassified (43.836 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.685 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.40% β-sheet: 0.00% Coil/Unstructured: 64.60%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF14312	FG-GAP_2	28.77
PF13480	Acetyltransf_6	1.37
PF13428	TPR_14	1.37
PF00069	Pkinase	1.37
PF00589	Phage_integrase	0.68
PF08448	PAS_4	0.68
PF01011	PQQ	0.68
PF13442	Cytochrome_CBB3	0.68
PF03740	PdxJ	0.68
PF13738	Pyr_redox_3	0.68
PF03704	BTAD	0.68
PF13517	FG-GAP_3	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.48
COG0854	Pyridoxine 5'-phosphate synthase PdxJ	Coenzyme transport and metabolism [H]	0.68
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.68
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.37 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	13.01 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	50.68 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	10.96 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.05 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.68 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	10.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.37 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.68 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	10.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.05 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10345743	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300002557\|JGI25381J37097_1061840	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300002558\|JGI25385J37094_10058031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300002911\|JGI25390J43892_10170025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300002916\|JGI25389J43894_1060508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300003319\|soilL2_10294524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1239	Open in IMG/M
3300004153\|Ga0063455_100258055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	919	Open in IMG/M
3300005205\|Ga0068999_10113359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005440\|Ga0070705_100030525	All Organisms → cellular organisms → Bacteria	2976	Open in IMG/M
3300005444\|Ga0070694_101515195	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005468\|Ga0070707_100654321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1013	Open in IMG/M
3300005518\|Ga0070699_100695749	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300005542\|Ga0070732_11026672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005547\|Ga0070693_101633941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300005549\|Ga0070704_100099482	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300005549\|Ga0070704_100583563	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300005549\|Ga0070704_102143458	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005555\|Ga0066692_10428235	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005555\|Ga0066692_10841555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300005557\|Ga0066704_10048578	All Organisms → cellular organisms → Bacteria	2672	Open in IMG/M
3300005557\|Ga0066704_10519296	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300005558\|Ga0066698_10252180	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300005558\|Ga0066698_10559692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300005578\|Ga0068854_101284665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300005586\|Ga0066691_10181588	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1220	Open in IMG/M
3300005586\|Ga0066691_10357643	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300006034\|Ga0066656_10042634	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300006046\|Ga0066652_101619572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300006791\|Ga0066653_10038969	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300006796\|Ga0066665_10024934	All Organisms → cellular organisms → Bacteria	3826	Open in IMG/M
3300006845\|Ga0075421_101982613	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300006845\|Ga0075421_102731562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300006852\|Ga0075433_10474978	All Organisms → cellular organisms → Bacteria → Proteobacteria	1101	Open in IMG/M
3300006854\|Ga0075425_100287709	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300006854\|Ga0075425_102691521	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300006881\|Ga0068865_101322617	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300006903\|Ga0075426_10447080	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300006903\|Ga0075426_10656024	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	785	Open in IMG/M
3300006914\|Ga0075436_100031875	All Organisms → cellular organisms → Bacteria	3631	Open in IMG/M
3300006914\|Ga0075436_100066899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2484	Open in IMG/M
3300006954\|Ga0079219_10018881	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300009012\|Ga0066710_101265103	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300009012\|Ga0066710_104203099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300009089\|Ga0099828_10129318	All Organisms → cellular organisms → Bacteria	2216	Open in IMG/M
3300009089\|Ga0099828_10929418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300009090\|Ga0099827_10045046	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3286	Open in IMG/M
3300009137\|Ga0066709_100646723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1513	Open in IMG/M
3300009137\|Ga0066709_100952524	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1254	Open in IMG/M
3300009176\|Ga0105242_12897086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300009597\|Ga0105259_1137107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300010128\|Ga0127486_1039042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300010320\|Ga0134109_10012736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2456	Open in IMG/M
3300010320\|Ga0134109_10236226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300010320\|Ga0134109_10426959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300010322\|Ga0134084_10408458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010322\|Ga0134084_10457325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300010323\|Ga0134086_10195110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300010325\|Ga0134064_10412486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010329\|Ga0134111_10401046	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	587	Open in IMG/M
3300010337\|Ga0134062_10108940	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300010362\|Ga0126377_11812645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300010401\|Ga0134121_12410994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300011269\|Ga0137392_10563801	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300011438\|Ga0137451_1255051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300012200\|Ga0137382_10519692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300012202\|Ga0137363_11190458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300012203\|Ga0137399_11404019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300012204\|Ga0137374_10707831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300012206\|Ga0137380_10280430	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300012207\|Ga0137381_10687788	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300012207\|Ga0137381_11573014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012208\|Ga0137376_10073730	All Organisms → cellular organisms → Bacteria	2848	Open in IMG/M
3300012211\|Ga0137377_10087704	All Organisms → cellular organisms → Bacteria	2937	Open in IMG/M
3300012211\|Ga0137377_10587509	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300012349\|Ga0137387_10643257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300012351\|Ga0137386_10135944	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300012354\|Ga0137366_10471658	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300012357\|Ga0137384_10535559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300012363\|Ga0137390_11310102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300012373\|Ga0134042_1065873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300012532\|Ga0137373_11167288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300012683\|Ga0137398_10081874	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1993	Open in IMG/M
3300012917\|Ga0137395_10338966	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300012918\|Ga0137396_10724841	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	733	Open in IMG/M
3300012922\|Ga0137394_10067086	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2984	Open in IMG/M
3300012922\|Ga0137394_10967784	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300012925\|Ga0137419_10944042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300012925\|Ga0137419_11192203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012930\|Ga0137407_10851163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300012972\|Ga0134077_10512283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300012976\|Ga0134076_10355186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300014154\|Ga0134075_10333062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300014157\|Ga0134078_10381930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300015054\|Ga0137420_1491652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4552	Open in IMG/M
3300015241\|Ga0137418_10873715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300015242\|Ga0137412_10944175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300015358\|Ga0134089_10357923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300015359\|Ga0134085_10449087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300017654\|Ga0134069_1041814	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300017654\|Ga0134069_1287902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300017656\|Ga0134112_10230131	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	731	Open in IMG/M
3300017659\|Ga0134083_10097301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300017997\|Ga0184610_1035929	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300018053\|Ga0184626_10111974	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300018084\|Ga0184629_10040639	All Organisms → cellular organisms → Bacteria	2070	Open in IMG/M
3300018089\|Ga0187774_10373289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300018433\|Ga0066667_10274297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1294	Open in IMG/M
3300018433\|Ga0066667_10958032	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	738	Open in IMG/M
3300018482\|Ga0066669_10119782	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300018482\|Ga0066669_12203634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300019789\|Ga0137408_1047530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300020170\|Ga0179594_10130309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300021081\|Ga0210379_10026909	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300025885\|Ga0207653_10040508	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300025922\|Ga0207646_11109246	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300026089\|Ga0207648_10636318	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300026296\|Ga0209235_1071320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1582	Open in IMG/M
3300026297\|Ga0209237_1120893	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300026298\|Ga0209236_1028577	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3011	Open in IMG/M
3300026298\|Ga0209236_1174026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300026300\|Ga0209027_1305892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300026301\|Ga0209238_1265532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300026304\|Ga0209240_1144007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300026310\|Ga0209239_1218649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300026324\|Ga0209470_1057797	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300026329\|Ga0209375_1204214	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
3300026523\|Ga0209808_1252432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300026527\|Ga0209059_1215210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300026528\|Ga0209378_1299551	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300026536\|Ga0209058_1122037	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300026536\|Ga0209058_1314592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300026538\|Ga0209056_10606447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300026542\|Ga0209805_1220692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300027643\|Ga0209076_1093724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300027882\|Ga0209590_10661125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300027909\|Ga0209382_10267322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1937	Open in IMG/M
3300028718\|Ga0307307_10009534	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300028784\|Ga0307282_10322735	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	745	Open in IMG/M
3300028784\|Ga0307282_10341463	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300028878\|Ga0307278_10167083	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300030903\|Ga0308206_1063908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300031720\|Ga0307469_11977275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031820\|Ga0307473_10591502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300032180\|Ga0307471_103904732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300034114\|Ga0364938_116949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300034692\|Ga0373917_0084255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.73%
Host-Associated	Host-Associated	9.59%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.93%
Plants	Host-Associated → Plants	9.59%
Aquatic	Environmental → Aquatic	4.79%
Bioremediation	Engineered → Bioremediation	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.53%
Sediment	Environmental → Aquatic → Sediment	3.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.05%
Freshwater	Environmental → Aquatic → Freshwater	0.68%
Marine	Environmental → Aquatic → Marine	0.68%
Floodplain	Environmental → Terrestrial → Floodplain	0.68%
Metal	Engineered → Bioremediation → Metal	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.34%
Loam	Environmental → Terrestrial → Soil → Loam	8.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.05%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.68%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.37%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.68%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.05%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.05%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.37%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M
3300034692	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_103457431	3300001686	Soil	AVQSLAREMLAGAKPTIGEEPLERTRSLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
JGI25381J37097_10618401	3300002557	Grasslands Soil	ATPRNDMAAVQALARQMLTGKKPTIGEEPLERTRSLPLWLTEWMRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
JGI25385J37094_100580312	3300002558	Grasslands Soil	ADTGIASALGKPATPRNDMAAVQLLAREMLTGTKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
JGI25390J43892_101700252	3300002911	Grasslands Soil	NDMAAVQSLAKEMLTGSKPTVGEEPIERARSLPLWLTEWLRSRWPDAGRALAGMRPPPPSSSQSSQLFA*
JGI25389J43894_10605081	3300002916	Grasslands Soil	DMAAVQSLAKEMLTGSKPTVGEEPIERARSLPLWLTEWLRSRWPDAGRALAGMRPPPPSSSQSSQLFA*
soilL2_102945241	3300003319	Sugarcane Root And Bulk Soil	DDMIKLQALAREMLTGRSKRDAEEPLENIRSLPGWLNEWLRSRWPDASHALAGMKPPPPHSDSQSSQLFA*
Ga0063455_1002580552	3300004153	Soil	LLADQGVLVADTGIASALGKPATTRNDMAAVQSLAREMLAGAKPTIGEEPLERTRSLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0068999_101133591	3300005205	Natural And Restored Wetlands	GIASALGKPATPRIDMAAVQALTREMLNGTKPTVSDEPIERSRTLPLWLSEWMRSRWSDAGRALAGMRPPPASGSQSSQLFA*
Ga0070705_1000305253	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DEGILVVDTGIASALGKPATARNDMAAVQTLAREMLNGTKPTVTDEPLERTRTLPLWLSEWLRQRWVDAGRALAGMRPPPPSSSQSSQLFA*
Ga0070694_1015151952	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ASSLGKPATPRNDMAAVQLLAREMLSGLKPTIGQEPLERTRSLPLWLTEWLRSRWSDAGRALAGMRQPPPSNPPSPQLFA*
Ga0070707_1006543211	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLLADQGVLVADTGIASALGKPATARNDMAAVQSLAREMLTGRKPTIGEEPLEHTRALPLWLTEWMRSRWADAERALAAMRPPPPSSSQSSQLFA*
Ga0070699_1006957492	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AENILVGDEGVLVADTGIAGALGRPASPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWSDAERALAGMRPPPPSSSQSSQLFA*
Ga0070732_110266722	3300005542	Surface Soil	ARNDMAAVQALAHEMLTGMKPAVGQEPLERSRTLPLWLSEWLRSRWADAGRALAAMRPPSASGPQSSQLFA*
Ga0070693_1016339411	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	ILVVDTGIASALGKPATARNDMAAVQTLAREMLNGTKPTVTDEPLERTRTLPLWLSEWLRQRWVDAGRALAGMRPPPPSSSQSSQLFA*
Ga0070704_1000994822	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GELKAENVLLADEGVLGADTGLASALGKPATPRNDMAAAQSLAREMLTGSKPTVGDEPLESTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0070704_1005835633	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AVQTLAREMLNGTKPTVTDEPLERTRTLPLWLSEWLRQRWIDAGRALAGMRPPPPSSSQSSQLFA*
Ga0070704_1021434582	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AVQTLAREMLNGTKPTVTDEPLERTRTLPLWLSEWLRQRWVDAGRALAGMRPPPPSSSQSSQLFA*
Ga0066692_104282352	3300005555	Soil	AAGIAHGELKAENVLVGDEGVLVADTGIAGALGRPASPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0066692_108415552	3300005555	Soil	TGIASALAKPATQRNDMAAVQSLAREMLTGSKPTVREEPIERTRSLPLWLTEWLRSRWPDAGRALAGMRPPPPSSSQSSQLFA*
Ga0066704_100485781	3300005557	Soil	GDEGVLVADTGIAGALGRPASPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0066704_105192963	3300005557	Soil	NDMAAVQLLAREMLTGAKPTIGEEPLEQTRTLPLWLMEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0066698_102521804	3300005558	Soil	LGKPATPRNDMAAVQSLAREMLTGSKPTIGEEPLEHTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0066698_105596921	3300005558	Soil	HAAEIAHGDLKAENVLLSDKDVLVADTGIATVLGKPATQRNDMAAMQSLAKEMLTGAKPTVRAEPIERTRALPLWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0068854_1012846651	3300005578	Corn Rhizosphere	VLLSDEGILVVDTGIASALAKPATARNDMAAVQALAREMLNGAKPSVTDEPLERTRTLPLWLSEWMRQRWVDAGRALAGMRPPPSSSSPSSQLFA*
Ga0066691_101815881	3300005586	Soil	PASPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0066691_103576433	3300005586	Soil	NDMAAVQLLAREMLSGLKPTIGQEPLERTRSLPLWLTEWLRSRWTDAGRALAAMRPPPPSSSQSSQLFA*
Ga0066656_100426341	3300006034	Soil	AAQISHGELKAENVLLADEGVLVADTGIASALGKPATPRNDMAAVQLLAREMLTGAKPTIGEEPLEQTRTLPLWLMEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0066652_1016195721	3300006046	Soil	ADTGIAGALGRPATPRNDMAAVQLLAREMLSGLKPTIGQEPLERTRSLPLWLTEWLRSRWSDAGRALAGMRPPPPSSPQSPQLSA*
Ga0066653_100389691	3300006791	Soil	QALTYEMLTGMKRTAGQEPLERSRTLPLWLSEWMRSRWVDAGRALAGIRPPPPSGPPSAQLFA*
Ga0066665_100249343	3300006796	Soil	KAENVLVGDEGVLVADTGIAGALGRPASPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0075421_1019826131	3300006845	Populus Rhizosphere	AGLEYAHGAGIAHGELKAENVLLAEQGVLVADTGIASALGKPATSRNDMAAVQSLAREMLTGTKPSVGEEPLESTRSLPLWLSEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0075421_1027315622	3300006845	Populus Rhizosphere	LGKPATARNDMAAVQALAREMLNGAKPTVTDEPIERSRTLPLWLSEWMHSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0075433_104749781	3300006852	Populus Rhizosphere	DQGVLVADTGIAGALGKPATQRNDMAAVQSLAKEMLTGSKPTAREEPIERTRSLPLWLTEWLRSRWPDAGRALAGMRPPPPSSSQSSQLFA*
Ga0075425_1002877091	3300006854	Populus Rhizosphere	GKPATPRNDMAAVQLLAREMLSGLKPTIGQEPLERTRSLPLWLTEWLRSRWSDAGRALAGLRQPPPSNPPSPQLFA*
Ga0075425_1026915212	3300006854	Populus Rhizosphere	LGKPATQRNDMAAVQSLAKEMLTGAKPTVGEEPIERTRSLPLWLTEWLRSRWPDASRALAGMRPPPPSGSQSSQLFA*
Ga0068865_1013226171	3300006881	Miscanthus Rhizosphere	MAAVQTLAREMLNGTKPTVTDEPLERTRTLPLWLSEWLRQRWIDAGRALAGMRPPPPSSSQSSQLFA*
Ga0075426_104470801	3300006903	Populus Rhizosphere	LGKPATPRNDMAAVQAVAHEMLTGMKPAIGQEPLERSRTLPLWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0075426_106560241	3300006903	Populus Rhizosphere	LGKPATPRNDMAAVQLLAREMLTGLKPTIGQEPLERTRTLPLWLTEWLRSRWSDAGRALAGMRQPPPSNPPSPQLFA*
Ga0075436_1000318756	3300006914	Populus Rhizosphere	DMAAVQSLAKEMLTGAKPTVGEEPIERTRSLPLWLTEWLRSRWPDASRALAGMRPPPPSGSQSSQLFA*
Ga0075436_1000668992	3300006914	Populus Rhizosphere	RLLPNRWLPARQHLAREMLTGRKPTIGEEPLEHTRALPLWLTEWLRSRWADAGRALAAMRPPPPSSSQSSQLFA*
Ga0079219_100188811	3300006954	Agricultural Soil	PRNDMAAVQLLAREMLSGLKPTIGQEPLERTRTLPLWLTEWLRSRWSDAGRALAGMRQPPPSNPPSPQLFA*
Ga0066710_1012651031	3300009012	Grasslands Soil	GKPATQRNDMAAVQSLAKEMLTGAKPTVGEEPIERTRSLPLWLTEWLRSRWPDASRALAGMRPPPPSGSQSSQLFA
Ga0066710_1042030992	3300009012	Grasslands Soil	EGVLVADTGIASALGKPATPRNDMAAVQLLAREMLTGTKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0099828_101293181	3300009089	Vadose Zone Soil	AHAHAAEIAHGELKAENILVGDEGVLVADTGIAGALGRPATPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWSDAGRALAGMRPPPPSSSQSPQLFA*
Ga0099828_109294181	3300009089	Vadose Zone Soil	GVLVADTGIASALGKPATPRNDMAAVQLLAREMLTGAKPAIGEEPLEQTRTLPLWLMEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0099827_100450463	3300009090	Vadose Zone Soil	ADTGIAGALGRPASPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0066709_1006467232	3300009137	Grasslands Soil	GIASALGKPATPRNDMAAVQLLGREMLTGTKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPTSSSQSSQLFA*
Ga0066709_1009525242	3300009137	Grasslands Soil	RNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0105242_128970862	3300009176	Miscanthus Rhizosphere	HGELKPENVLLSDEGILVVDTGIASALGKPATARNDMAAVQTLAREMLNGTKPTVTDEPLERTRTLPLWLSEWLRQRWIDAGRALAGMRPPPPSSSQSSQLFA*
Ga0105259_11371072	3300009597	Soil	AGILLVDTGLASALGKPATTRNDMAAVQALAREMLNGTKPTASDEPIEQARSLPLWLSEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0127486_10390421	3300010128	Grasslands Soil	ADEGVLVADTGIAGALGRPATPRNDMAAVQLLAREMLSGLKPTIGQEPLERTRSLPLWLTEWLRSRWSDAGRALAGMRPPPSSSQPQLFA*
Ga0134109_100127362	3300010320	Grasslands Soil	NVLLADEGVLVADTGIASALGKPATPRNDMAAVQSLAREMLTGAKPTIGDEPLERTRNLPLWLTEWMRLRWADAGRALAAMRPPPPSSSQSSQLFA*
Ga0134109_102362262	3300010320	Grasslands Soil	GELKPENVLLADQGVLVADTGIASALGKPATARNDMAAVQSLAREMLLGRKPTIGEEPLERTRALPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0134109_104269591	3300010320	Grasslands Soil	ADTGIASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA*
Ga0134084_104084582	3300010322	Grasslands Soil	LSDKDVLVADTGIATVLGKPATQRNDMAAMQSLAKEMLTGAKPTVRAEPIERTRALPLWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0134084_104573251	3300010322	Grasslands Soil	TGIASALGKPATPRNDMAAVQSLAREMLTGAKPTIGDEPLERTRNLPLWLTEWMRLRWADAGRALAAMRPPPPSSSQSSQLFA*
Ga0134086_101951103	3300010323	Grasslands Soil	SDDGVLVADTGIASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA*
Ga0134064_104124861	3300010325	Grasslands Soil	GLAHAHAGDIAHGELKAENILVGDEGVLVADTGIAGALGRPATPRNDMAAVQALAREMLTGKKPTIGEEPLERTRSLPLWLTEWMRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0134111_104010461	3300010329	Grasslands Soil	TPRNDMAAVQSLAREMLTGAKPTIGDEPLERTRNLPLWLTEWMRLRWADAGRALAAMRPPPPSSSQSSQLFA*
Ga0134062_101089404	3300010337	Grasslands Soil	VADTGIASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA*
Ga0126377_118126452	3300010362	Tropical Forest Soil	ENVLLAEQGVLVADTGIASALGKPATTRNDMAAVQAPAREMLTGKKPTIGEEPLERTRSLPLWLSEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0134121_124109941	3300010401	Terrestrial Soil	DMAAVQLLAREMLTGLKPTIGQEPLERTRSLPLWLTEWLRSRWSDAGRALAGMRQPPPSNPPSPQLFA*
Ga0137392_105638011	3300011269	Vadose Zone Soil	LLADEGVLVADTGIASALGKPATPRNDMAAVQSLAKEMLTGAKPTVGEEPIERTRSLPLWLTEWLRSRWPDASRALAGMRPPPPSGSQSSQLFA*
Ga0137451_12550512	3300011438	Soil	GKPATTRNDMAAVQALAREMLNGTKPTVSDEPIEQARSLPLWLSEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137382_105196921	3300012200	Vadose Zone Soil	QVSHGELKAENVLLSDDGVLVADTGIASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA*
Ga0137363_111904581	3300012202	Vadose Zone Soil	KAENVLLADQGVMVADTGIASALGKPATQRNDMAAVQSLAKEMLTGSKPTVGEEPIERTRSLPLWLTEWLRSRWPDAGRALAGMRPPPPSSPQSSQLFA*
Ga0137399_114040192	3300012203	Vadose Zone Soil	KAENVLLADEGVLVADTGIASALGKPATSRNDMAAVQSLAREMLTGAKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAAMRPPPPSSSQSSQLFA*
Ga0137374_107078311	3300012204	Vadose Zone Soil	NVLLSDDGVLVADTGIASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA*
Ga0137380_102804301	3300012206	Vadose Zone Soil	ALGRPASPRNDMAAVQSLAREMLTGAKPTIGEEPLERTRTLPLWLAEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137381_106877882	3300012207	Vadose Zone Soil	LGKPATPRNDMAAVQALAREMLTGAKPTIGEEPLEHTRTLPLWLAEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137381_115730141	3300012207	Vadose Zone Soil	PATPRNDMAAVQSLAREMLTGAKPAIGDEPLERTRTLPLWLTEWLRLRWADAGRALAAMRPPPPSSSQSSQLFA*
Ga0137376_100737303	3300012208	Vadose Zone Soil	LADEGVLVADTGIAPALGKPATPRNDMAAVQALAREMLTGAKPTIGEEPLEHTRTLPLWLAEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137377_100877041	3300012211	Vadose Zone Soil	ELKPENVLLADEGVLVADTGIAPALGKPATPRNDMAAVQALAREMLTGAKPTIGEEPLERTRTLPLWLAEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137377_105875091	3300012211	Vadose Zone Soil	AHAHAAAVSHGEMKAENVLLSDDGVLVADTGIASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA*
Ga0137387_106432571	3300012349	Vadose Zone Soil	TGIAGALGRPATPRNDMAAVQLLAREMLSGLKPTIGQEPLERTRSLPLWLTEWLRSRWSDAGRALAGMRPPPPSSPQSPQLFA*
Ga0137386_101359444	3300012351	Vadose Zone Soil	AVQLLAREMLSGLKPTIGQEPLERTRSLPLWLTEWLRSRWSDAGRALAGMRPPPPSSPQSPQLFA*
Ga0137366_104716581	3300012354	Vadose Zone Soil	VLLADEGVLVADTGIATALGKPATPRNDMAAVQALAREMLTGAKPTIGEEPLERTRTLPLWLAEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137384_105355593	3300012357	Vadose Zone Soil	LAAAHAATISHGELKAENVLLADEGVLVADTGIASALGKPATPRNDMAAVQSLAREMLTGSKPTIGEEPLEHTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137390_113101023	3300012363	Vadose Zone Soil	AAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0134042_10658733	3300012373	Grasslands Soil	GIAPALGKPATPRNDMAAVQALAREMLTGAKPTIGEEPLEHTRTLPLWLAEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137373_111672881	3300012532	Vadose Zone Soil	DTGIPSALGKPATPRNVMAAVQVLAREMLSGTKPTIGEEPLERTRTLPLWLTEWMRSRWTDAGRALAAMRPPPPSSSQSSQLFA*
Ga0137398_100818742	3300012683	Vadose Zone Soil	LGKPATPRNDMAAVQSLAREMLTGKKPTIGEEPLEQTRSLPLWFTEWMRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137395_103389663	3300012917	Vadose Zone Soil	GIASALGKPATQRNDMAAVQSLAKEMLTGYKPTVGEEPIERTRSLPLWLTEWLRSRWPDAGRALAGMRPPPPSSPQSSQLFA*
Ga0137396_107248412	3300012918	Vadose Zone Soil	ATPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137394_100670861	3300012922	Vadose Zone Soil	AAQISHGELKAENVLLADEGVLVADTGIATALGKPATPRNDMAAAQSLAREMLTGSKPTIGDEPLEQTRTLPLWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137394_109677842	3300012922	Vadose Zone Soil	QSLAREMLTGRKPTIDEEPLEHTRALPLWLTEWLRSRWTDAERALAGMRPPPPSSSQSSQLFA*
Ga0137419_109440422	3300012925	Vadose Zone Soil	LAHAHAAQVSHGELKAENVLLSDDGVLVADTGIASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSGSQSSQLFA*
Ga0137419_111922032	3300012925	Vadose Zone Soil	ATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA*
Ga0137407_108511632	3300012930	Vadose Zone Soil	LAAAHAAEIAHGELKAENVLLADEGVLVADTGIASALGKPATPRNDMAAAQSLAREMLTGSKPTIGDEPLEQTRTLPLWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA*
Ga0134077_105122831	3300012972	Grasslands Soil	NDMAAVQSLAKEMLSGAKPTVGAEPLERTRALPLWLTEWLRSRWSDAGRALAGMRPPPPSSSHPQLFA*
Ga0134076_103551861	3300012976	Grasslands Soil	ATARNDMAAVQALTYEMLTGMKPTAGQEPLERSRTLPLWLSEWMRSRWVDAGRALAGIRPPPPSGPPSAQLFA*
Ga0134075_103330622	3300014154	Grasslands Soil	SALGKPATPRNDMAAVQSLAREMLTGSKPTIGEEPLEHTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0134078_103819302	3300014157	Grasslands Soil	LAHAHAAEISHGELKAENVLLAEEGVLVADTGIATALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA*
Ga0137420_14916523	3300015054	Vadose Zone Soil	VLVADTGIASALGKPATPRNDMAAVQSLAREMLTGAKPTIGEEPLEQTRTLPLWLMEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0137418_108737151	3300015241	Vadose Zone Soil	HAVEISHGELKAENVLLADEGVLVADTGIASALGKPATPRNDMAAAQLLAREMLTGAKPTIGEEPLERTRTLPLWLTDWLRSRWTDAGRALAAMRPPPPSGSQSSQLFA*
Ga0137412_109441752	3300015242	Vadose Zone Soil	VLLADEGVLVADTGLASALGKPATPRNDMAAAQSLAREMLTGSKPTVGDEPLESTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA*
Ga0134089_103579232	3300015358	Grasslands Soil	LVADAGIASALGKPATARNDMAAVQALTYEMLTGMKPTAGQEPLERSRTLPLWLSEWMRSRWVDAGRALAGIRPPPPSGPPSAQLFA*
Ga0134085_104490872	3300015359	Grasslands Soil	HGELKPENVLLADEGVLVADAGIASALGKPATPRNDMAAVQSLAREMLTGAKPAIGDEPLERTRTLPLWLTEWLRLRWADAGRALAAMRPPPPSSSQSSQLFA*
Ga0134069_10418141	3300017654	Grasslands Soil	SDDGVLVADTGIASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA
Ga0134069_12879021	3300017654	Grasslands Soil	KPENVLLADEGVLVADTGIAGELGRPATPRNDMAAVQLLAREMLSGLKPTIGQEPLERTRSLPLWLTEWLRSRWSDAGRALAGMRPPPPSSPQSPQLFA
Ga0134112_102301312	3300017656	Grasslands Soil	ALGKPATPRNDMAAVQSLAREMLTGSKPTIGEEPLEHTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0134083_100973012	3300017659	Grasslands Soil	RGVLAGLEHAQAAEIAHGELKPENVLLADQGVLVADTGIASALGKPATARNDMAAVQSLAREMLLGRKPTIGDEPLERTRALPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0184610_10359294	3300017997	Groundwater Sediment	HGELKPENVLLADEGILVVDTGIAAALGKPASARNDMAAVQSLTREMLNGAKPTIADEPLELTRTLPLWLSEWLRSRWSDAGRALAGMRPPPPSTSQSSQLFA
Ga0184626_101119741	3300018053	Groundwater Sediment	GIATALGKPASTRNDMAAVQSLVREMLNGAKPTISDEPLERTRTLPLWLTEWLRSRWSDAGRALAGMRPPPSSTSQSSQLFA
Ga0184629_100406393	3300018084	Groundwater Sediment	GIATALGKPASARNDMAAVQALTREMLNGAKPTVADEPLERSRSLPVWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA
Ga0187774_103732893	3300018089	Tropical Peatland	IAGALGKPATARNDMAAVQALTYEMLTGMKPAPGQEPLERTRSLPLWLSEWMRSRWADAGRALAGLRPPPASGSQSSQLFA
Ga0066667_102742971	3300018433	Grasslands Soil	AAEISHGELKAENVLLAEEGVLVADTGIATALGKPATTRNDMAAVQALAREMLTGAKPTIGEEPLERTRTLPLWLTDWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0066667_109580321	3300018433	Grasslands Soil	RPASPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0066669_101197821	3300018482	Grasslands Soil	PRNDMAAVQALARQMLTGKKPTIGEEPLERTRSLPLWLTEWMRSRWSDAGRALAGMRPPPPSSSQSSQLFA
Ga0066669_122036341	3300018482	Grasslands Soil	VLLADEGVLVADAGIASALGKPATARNDMAAVQALTYEMLTGMKRTAGQEPLERSRTLPLWLSEWMRSRWVDAGRALAGIRPPPPSGPPSAQLFA
Ga0137408_10475301	3300019789	Vadose Zone Soil	LAAAHAAEIAHGELKAENVLLADEGVLVADTGIASALGKPATPRNDMAAAQSLAREMLTGSKPTIGDEPLEQTRTLPLWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA
Ga0179594_101303091	3300020170	Vadose Zone Soil	HVADTGIETALGKPATSRNDMAAVQSLAREMLTGKKPTIGEEPLEQTRSLPLWFTEWMRSRWSDAGRALAGMRPPPPSSSQSSQLFA
Ga0210379_100269093	3300021081	Groundwater Sediment	AHDADVAHGELKAENVLLADEGILVVDTGIATALGKPASARSDMAAVQALTREMLNGAKPTVADEPLERSRSLPVWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA
Ga0207653_100405085	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	DEGVLVADTGLASALGKPATPRNDMAAAQSLAREMLTGSKPTVGDEPLESTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0207646_111092461	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AVQSLAREMLTGRKPTIGEDPLEHTRALPLWLTEWMRSRWADAERALAAMRPPPPSSSQSSQLFA
Ga0207648_106363182	3300026089	Miscanthus Rhizosphere	MPIPRYRSIASALGKPATARNDMAAVQTLAREMLNGTKPTVTDEPLERTRTLPLWLSEWLRQRWIDAGRALAGMRPPPPSSSQSSQLFA
Ga0209235_10713202	3300026296	Grasslands Soil	ENVLLADEGVLVADTGIASALGKPATPRNDMAAVQLLAREMLTGTKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0209237_11208931	3300026297	Grasslands Soil	VLLADEGVLVADTGIASALGKPATQRNDMAAVQSLAKEMLSGAKPTVGAEPLERTRALPLWLTEWLRSRWSDAGRALAGMRPPPPSSSHPQLFA
Ga0209236_10285774	3300026298	Grasslands Soil	LADEGVLVADTGIASALGKPATPRNDMAAVQLLAREMLTGTKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0209236_11740261	3300026298	Grasslands Soil	ADEGVLVADTGIASALGKPATPRNDMAAVQLLAREMLTGTKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPTSSSQSSQLFA
Ga0209027_13058921	3300026300	Grasslands Soil	AAALGKPATARNDMAALQALVREMLTGRRPNLAEEPVERARTLPAWFSEWMGFRWSDAGKALAAMRPPPPPSSHSSQLFA
Ga0209238_12655322	3300026301	Grasslands Soil	GVLVADTGIAGALGRPASPRNDMAAVQSLAREMLTGKKPTIGEEPLERSRALPLWLTEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0209240_11440073	3300026304	Grasslands Soil	IASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA
Ga0209239_12186492	3300026310	Grasslands Soil	ALGKPATARNDMAALQALVREMLTGRRPNLAEEPVERARTLPAWFSEWMGFRWSDAGKALAAMRPPPPPSSHSSQLFA
Ga0209470_10577974	3300026324	Soil	PENVLLADEGVLVADAGIASALGKPATARNDMAAVQALTYEMLTGMKPTAGQEPLERSRTLPLWLSEWMRSRWVDAGRALAGIRPPPPSGPPSAQLFA
Ga0209375_12042142	3300026329	Soil	ATARNDMAAVQSLAREMLLGRKPTIGEEPLERTRALPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0209808_12524321	3300026523	Soil	ENILVGDEGVLVADTGIAGALGRPATPRNDMAAVQALARQMLTGKKPTIGEEPLERTRSLPLWLTEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0209059_12152102	3300026527	Soil	VADTGIAGALGRPATPRNDMAAVQALARQMLTGKKPTIGEEPLERTRSLPLWLTEWMRSRWSDAGRALAGMRPPPPSSSQSSQLFA
Ga0209378_12995512	3300026528	Soil	VQLLAREMLTGTKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPTSSSQSSQLFA
Ga0209058_11220371	3300026536	Soil	AENVLLADEGVLVADTGIASALGKPATPRNDMAAVQSLAREMLTGSKPTIGEEPLEHTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0209058_13145922	3300026536	Soil	HAAEIAHGDLKAENVLLSDKDVLVADTGIATVLGKPATQRNDMAAMQSLAKEMLTGAKPTVRAEPIERTRALPLWLTEWLRSRWSDAGRALAGMRPPPPSSSQSSQLFA
Ga0209056_106064472	3300026538	Soil	DEGVLVADTGIASALGKPATPRNDMAAVQLLAREMLTGTKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0209805_12206922	3300026542	Soil	GVLVADTGIASALGRPATPRNDMAAVQSLAREMLTGAKPTIGEEPLERTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSPQLFA
Ga0209076_10937241	3300027643	Vadose Zone Soil	VLVADTGIASALGKPATPRNDMAAVQSLAREMLTGAKPTIGEEPLEQTRTLPLWLMEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0209590_106611252	3300027882	Vadose Zone Soil	VLVADTGIAGALGKPATPRSDMAAVQAVAHEMLTGMRPSIGQEPLERSRSLPLWLTEWLRSRWADAGRALAGLRPPPSSSPEPPQLFA
Ga0209382_102673222	3300027909	Populus Rhizosphere	IASALGKPATARNDMAAVQALAREMLNGAKPTVTDEPIERSRTLPLWLSEWMHSRWSDAGRALAGMRPPPPSSSQSSQLFA
Ga0307307_100095341	3300028718	Soil	SHGELKAENVLLADEGVLVADTGIASALGKPATPRNDMAAVQSLAREMLTGAKPTAGEEPLERTRTLPLWLTEWLRSRWTDAGRALAAMRPPPPSSSQSSQLFA
Ga0307282_103227352	3300028784	Soil	DMAAAQSLAREMLTGSKPTVGDEPLESTRTLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0307282_103414632	3300028784	Soil	ATPRNDMAAVQSLAREMLTGAKPTAGEEPLERTRTLPLWLTEWLRSRWTDAGRALAAMRPPPPSSSQSSQLFA
Ga0307278_101670831	3300028878	Soil	KAENVLLSDDGVLVADTGIASALGKPATTRNDMAAVQLLTREMLTGAKPTIGEEPLEQTRTLPLWLTEWLRSRWTDAGRALAGMRPPPSSSSQSSQLFA
Ga0308206_10639082	3300030903	Soil	ELKAENVLLADEGVLVADTGIASALGKPATPRNDMAAAQSLAREMLTGSKPTVGDEPLESTRSLPLWLTEWLRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0307469_119772751	3300031720	Hardwood Forest Soil	AAGIAHGELKPENVLLADAGILVVDTGLASALGKPATARNDMAAAQALAREMLNGTKPTVTDEPLELTRALPLWLSEWMRSRWTDAGRALAGMRQPPPSTPPSSQLFA
Ga0307473_105915023	3300031820	Hardwood Forest Soil	VLLADQGVMIADTGIASALGKPATQRNDMAAVQSLAKEMLTGAKPTVGEEPIERTRSLPLWLTEWLRSRWPDASRALAGMRPPPPSGSQSSQLFA
Ga0307471_1039047321	3300032180	Hardwood Forest Soil	HAHAAEISHGELKAENVLLADEGVLVADAGIASALGKPATPRNDMAAVQLLAREMLTGSKPTIGEEPLESTRTLPLWLTEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA
Ga0364938_116949_3_266	3300034114	Sediment	LVADTGIAAALGKPASTRNDMAAVQALAREMLNGAKPSIGEEPLERMRSLPLWLTDWMRSRWSDAGKALAAMRPPPPSSSQSSQLFA
Ga0373917_0084255_2_208	3300034692	Sediment Slurry	DMAAVQALAREMLTGKKPTIGEEPLERTRSLPLWLSEWMRSRWTDAGRALAGMRPPPPSSSQSSQLFA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049536

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences