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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F049515 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 146 |
| Average Sequence Length | 98 residues |
| Representative Sequence | MTRRFVQIALVCVVMLGVASLATAQQVPQPMVRLGNFIEVGNDVFMHIMAQGDIRYRTTENYDFDSRVRDRVSSRSPSSTVVQEGEFDGSYAELR |
| Number of Associated Samples | 106 |
| Number of Associated Scaffolds | 146 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 83.56 % |
| % of genes near scaffold ends (potentially truncated) | 95.89 % |
| % of genes from short scaffolds (< 2000 bps) | 95.89 % |
| Associated GOLD sequencing projects | 105 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.29 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (87.671 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (39.726 % of family members) |
| Environment Ontology (ENVO) | Unclassified (40.411 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Unclassified (46.575 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 52.85% β-sheet: 0.00% Coil/Unstructured: 47.15% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.29 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 146 Family Scaffolds |
|---|---|---|
| PF01521 | Fe-S_biosyn | 2.05 |
| PF00239 | Resolvase | 2.05 |
| PF13857 | Ank_5 | 0.68 |
| PF01663 | Phosphodiest | 0.68 |
| PF02580 | Tyr_Deacylase | 0.68 |
| PF05685 | Uma2 | 0.68 |
| PF13328 | HD_4 | 0.68 |
| COG ID | Name | Functional Category | % Frequency in 146 Family Scaffolds |
|---|---|---|---|
| COG0316 | Fe-S cluster assembly iron-binding protein IscA | Posttranslational modification, protein turnover, chaperones [O] | 2.05 |
| COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | Replication, recombination and repair [L] | 2.05 |
| COG2452 | Predicted site-specific integrase-resolvase | Mobilome: prophages, transposons [X] | 2.05 |
| COG4841 | Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family | Function unknown [S] | 2.05 |
| COG1490 | D-aminoacyl-tRNA deacylase | Translation, ribosomal structure and biogenesis [J] | 0.68 |
| COG4636 | Endonuclease, Uma2 family (restriction endonuclease fold) | General function prediction only [R] | 0.68 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 87.67 % |
| All Organisms | root | All Organisms | 12.33 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 39.73% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 14.38% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 10.96% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 7.53% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.11% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.74% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.74% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.74% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.05% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.37% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.37% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 1.37% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 1.37% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 1.37% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 1.37% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 0.68% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.68% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.68% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.68% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.68% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.68% |
| Boreal Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil | 0.68% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300005180 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005558 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 | Environmental | Open in IMG/M |
| 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Host-Associated | Open in IMG/M |
| 3300006796 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 | Environmental | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300009817 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 | Environmental | Open in IMG/M |
| 3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
| 3300010086 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010106 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010107 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010109 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010136 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010137 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010139 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010323 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
| 3300010862 | Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010896 | Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
| 3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012364 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012371 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012376 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012380 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012382 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012392 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012396 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012397 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012401 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012406 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012407 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300015356 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300015358 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300018076 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex | Environmental | Open in IMG/M |
| 3300018084 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1 | Environmental | Open in IMG/M |
| 3300019229 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019248 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019249 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019255 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019259 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019279 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020066 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300021951 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300023208 (restricted) | Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MG | Environmental | Open in IMG/M |
| 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026536 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes) | Environmental | Open in IMG/M |
| 3300027957 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes) | Environmental | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300030570 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030571 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb5 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030608 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030628 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb6 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030785 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030829 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030830 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030831 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030902 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030903 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030904 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030905 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030986 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030987 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030989 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030993 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031054 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031081 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031091 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031093 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031094 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031096 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031097 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031099 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031125 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031421 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031422 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031424 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031505 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_139 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034644 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034661 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034664 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034673 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034678 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034680 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034681 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| Ga0066685_108626831 | 3300005180 | Soil | MRRLTQVALLGVLVLAMASLATAQQVPQPVVRVGNFIEVGNDVFMHIMASADIRYHTMTNFDFDSRVRDRPGGRFPDDGTQQDAESDLTWAELRLGVEFKYQKNL |
| Ga0066388_1084824921 | 3300005332 | Tropical Forest Soil | MVRHLAQVTMMGALVLAVVSVATAQQVPQPMVRLSELFDVGNNVFMHILASADIRYKTVENYDFANKVCDRTPDRSPSSTASQEGDSDLSYAELRLGGGGQVSEKPDALPAVRIS |
| Ga0066698_101343873 | 3300005558 | Soil | MRRLTQIALMGVLVLMVASLASAQQVPEPMVRLGNFIEVGNDVFMHIMAAIDTRYRTTENYDFDSKVRDRVSSRFPGDTVAMNASGDLLTAQLRLGVEAKYQKNLTLYLLFQ |
| Ga0081540_10098838 | 3300005983 | Tabebuia Heterophylla Rhizosphere | MMRRLTQLALIVLVVLGGATLATAQQAMQPVARLGNFIEVGNDVFMHIIGSADIRFKTVEIYDFEAQVRDRAASRSPSSTAVQEGDGDLMYSEL |
| Ga0066665_113873571 | 3300006796 | Soil | MTRRFVQIALVCVVMLGVASLATAQQVPQPMVRLGNFIEVGNDVFMHIMAQGDIRYRTTENYDFDSRVRDRVSSRSPSSTVVQEGEFDGSYAELR |
| Ga0075431_1016965391 | 3300006847 | Populus Rhizosphere | MMRRLTQLVLMGVVVLGVAALAAAQQEPQPVVRLGNFIEVGNDVFMHIIGAADIRYKTTENYDFEGQVRDRTGSRSPSSTPEHEGESDLSFAELRLG |
| Ga0066710_1005975132 | 3300009012 | Grasslands Soil | MRRLTQVALLGVLVLAMASLATAQQVPQPVVRVGNFIEVGNDVFMHIMASADIRYHTTTNFDFDSRVRDRPGGRFPDDGTQQDAESDLTGADLRLGVELKYEKNVTL |
| Ga0066710_1007828821 | 3300009012 | Grasslands Soil | MTRRFVQIALVCVLMLVVASMAAAQQAPQPMVRLGNFIEVGNDVFMHIMAQADIRYRTTENYDFDSRVRDRVSSRSPSSTVVQEGEFDGSYAELRLGVEAR |
| Ga0111539_100757531 | 3300009094 | Populus Rhizosphere | VVRLGNFIEVGNDVFMHIIASADIRYKTVTNYDFDNSTRDRTPDRSPSSTGSQEGETDLSYAELRLGAEFRDQKDLTLYLLVGQQEIFDGNLS |
| Ga0111539_111463921 | 3300009094 | Populus Rhizosphere | VAALAAAQQEPQPVVRLGNFIEVGNDVFMHIIGAADIRYKTTENYDFEGQVRDRTGSRSPTESATQEGES |
| Ga0075418_111397411 | 3300009100 | Populus Rhizosphere | MVSLAAAQQVSQPAIRLGNFLEVGNDVFMHIIGSADIRYKTVENFDFENRVRDRTNNRSPSDVATHEADSDLSWAELRLGVELRYQKNLTLYL |
| Ga0066709_1019895651 | 3300009137 | Grasslands Soil | MVASLATAQQVPEPMVRLGNFIEVGNDVFMHIMAAIDTRYRTTENYDFDSKVRDRVSSRFPGDTVAMNASGDLLTAQLRLGVEAKY |
| Ga0105062_10260781 | 3300009817 | Groundwater Sand | MCIVVLGMASLAAAQQVPQPVVRLGNFIEVGNDVFMRIMAAADIRYRTTENYDFDSRVRDRTATRNPSSTSPQEGEGDLSYAELRLG |
| Ga0126384_115252301 | 3300010046 | Tropical Forest Soil | MEDPTMRRLTHVALLGVLVLGVASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYKTVENYDFDNNVRDRVASRSPSNTIPQEGEFDGTYAELRL |
| Ga0127496_10799111 | 3300010086 | Grasslands Soil | MTRRFVQIALVCIVMLGMASLATAQQVPQPMVRLGDFIEVGNDVFMKIMASADIRYHTTENFDFDTKVRDRVNSRGPDDGTPQES |
| Ga0127472_11316851 | 3300010106 | Grasslands Soil | MTRRFVQIALVCVVMLVVASMAAAQQAPQPMVRLGNFIEVGNDVFMHIMAQADIRYRTTENYDFDSRVRDRVSSRSPSSTIVQEGEFDGTYAELRLG |
| Ga0127494_10217092 | 3300010107 | Grasslands Soil | MTRRFVQRALVCVVALGVASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDSRVRDRVSSRSPSSTVVQEGEFDGTYAELRLGVEARYQKNL |
| Ga0127497_10483881 | 3300010109 | Grasslands Soil | MTRRFVQIALVCIVMLGMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGVRDRTSSRSPSSTSA |
| Ga0127447_11535481 | 3300010136 | Grasslands Soil | MLGMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGVRDRTSSRSPSSTSAQEGEFDGTYAEL |
| Ga0126323_11337001 | 3300010137 | Soil | MAALAAAQQALQPVARLGNFIEVGNDVFMHIIGSADIRYKTTENYDFEAQVRDRPGSRSPTEAATQEGESDLSYAELRLGAEFR |
| Ga0127464_11467341 | 3300010139 | Grasslands Soil | MLVVASMAAAQQAPQPMVRLGNFIEVGNDVFMHIMAQADIRYRTTENYDFDSRVRDRVSSRSPSSTVVQEGEFDGTYAEL |
| Ga0127503_100768461 | 3300010154 | Soil | MLGVASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGVRDRTSSRSPSSTSAQEGEFDGTYAELRLGV |
| Ga0134086_101785011 | 3300010323 | Grasslands Soil | MATAQQVPQPVVRTGNFIEVGNDVFMHIIASADIRYKTAHNYDFDDKVRDRTPDRSPSSTLSQEGESDLSYAELRLGVEARYQKNLTLYLLFEHQQ |
| Ga0126348_11501511 | 3300010862 | Boreal Forest Soil | MGVLVLGVASLATAQQVPQPVVRLGNFIEVGNDVFMHIIGTADIRYRTTQNYDFEGKVRDRTFSRFPGDTVTQEAEFDGSYA |
| Ga0138111_11617551 | 3300010896 | Grasslands Soil | MTRRFVQIALVCIVMLGMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDSRVRDRVSSRSPSSTIVQEGEFD |
| Ga0137365_106496941 | 3300012201 | Vadose Zone Soil | MVVSLATAQQLPEPMVRLGNFIEVGNDVFMHIMATADIRYRTTEGYDFERRVRERVSSRNPSNTVPQEGSGDLTWAELRLGVE |
| Ga0137374_101938471 | 3300012204 | Vadose Zone Soil | MRQLAQGILMGVLVLAAASLAGAQQMPQPMVRLGDFIEVGNDVFMHIMASVDIRYKTVENDDFEQRVRDRVSNRTPGSTDTQDLGDLSFAELRLGAEF |
| Ga0137381_101982892 | 3300012207 | Vadose Zone Soil | MGVLVLMVASLASAQQVPEPMVRLGNFIEVGNDVFMHIMAAIDTRYRTTENYDFDSKVRDRVSSRFPGDTVAMNASGDLLTAQLRLGVEAKYQKNLT |
| Ga0137379_117497731 | 3300012209 | Vadose Zone Soil | MTRRFVQIALVCIVMLGMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGVRDRTSSRSPSSTSAQEGEFDGTYAELRLGVEAKYQKNLTLYLLFEHQQ |
| Ga0150985_1073895841 | 3300012212 | Avena Fatua Rhizosphere | MLLLVVVSLATAQQVPQPMVRLGNFIEVGNDVFMHIMATADIRYRTTEGYDFERRVRERVSSRNPSNTVPQEGSGDLTW |
| Ga0150985_1161371412 | 3300012212 | Avena Fatua Rhizosphere | MRRLTQVALLGVLVLAMVSLAKAQQVPQPMVRLGNFMEVGNDVFMKIMASADIRYHTTENWDFDNKVRDRPGGRFPDDGTQQDSESDLTWAELRLGVEAKYQKNLTLYLLF |
| Ga0137387_107613541 | 3300012349 | Vadose Zone Soil | MTRRFVQIALVCIVMLGMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGVRDRTSSRSPSSTSAQEGEFDGTYAE |
| Ga0137372_109827031 | 3300012350 | Vadose Zone Soil | VSVLVLAAASLATAQQAPQPMVRLGNFIEVGNDVFMHIMAAADIRYMTVTNRDFESRVRDRAHAREPGSSPTRESEGDIAQAELRLGVEARYQKNLTLYLLFEHQQ |
| Ga0137360_112591521 | 3300012361 | Vadose Zone Soil | MIRRLAQVAMMGVLVLAVASVATAQQVPQPMARLSNFIEVGNDVFMHIIASADIRYKTVTNYDFDNNVRDRTPDRSPSSTASQEGESDLSYAELRLGVEARYQKNLTLYLLFEHQQV |
| Ga0134027_10479991 | 3300012364 | Grasslands Soil | MTRRFVQIALVCIVMLGMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGVRDRTSSRSPSSTSAQEGEFDGTYAELRLG |
| Ga0134022_10191871 | 3300012371 | Grasslands Soil | MASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTTNWDFDSRVRDRTPSRFPGDTVTQEGEF |
| Ga0134032_12140781 | 3300012376 | Grasslands Soil | MASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTTNWDFDSRVRDRTPSRFPGDTVTQEGEFDGTYAELRLGVEAR |
| Ga0134047_10956641 | 3300012380 | Grasslands Soil | MLVVASMAAAQQAPQPMVRLGNFIEVGNDVFMHIMAQADIRYRTTENYDFDSRVRDRVSSRSPSSTVVQEGEFDGTYAELRLGVEARYQKN |
| Ga0134038_10509221 | 3300012382 | Grasslands Soil | MTRRFVQIALVCIVVLGMASLATAQQVPQPMVRLGNFIEVGNDVFMHIMAQADIRYRTTENYDFDSRVRDRVNSRFPSDTTVHEGEFD |
| Ga0134043_11179381 | 3300012392 | Grasslands Soil | MLGVASLATAQQVPQPMVPLGNFIEVGNDVFMHIMAQADIRYRTTTNWDFDSRVRDRTPSRFPGDTVTQESEFDGTYAELRLGVEARYQKN |
| Ga0134057_10899701 | 3300012396 | Grasslands Soil | VSLATAQQVPQPMVRLGNFIEVGNDVFMHIMAAADIRYQTVHNRDFEDRVRDRAHAREPGSSPTRESEGDIMQAELRLGVEARYQK |
| Ga0134056_12705141 | 3300012397 | Grasslands Soil | MLGVASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGVRDRTSSRSPSSTSAQEG |
| Ga0134055_13490981 | 3300012401 | Grasslands Soil | MTRRFVQIALVCIVMLGMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGVRDRTSSRSPSSTSAQEGEFDGTYAALRLGVEAKYQKN |
| Ga0134053_12379761 | 3300012406 | Grasslands Soil | MGVVVLGVAALAAAQQAPQPVVRLGNFIEVGNDVFMHIIGSADIRYKTTENYDFEARVRDRTPTRSPSSTSEHEGEGDLSFAELRL |
| Ga0134050_13665791 | 3300012407 | Grasslands Soil | VATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTTNWDFDSRVRDRTPSRFPGDTVTQEGEFDGTYAELRLG* |
| Ga0150984_1077428001 | 3300012469 | Avena Fatua Rhizosphere | MRRLTQVVLLGVVVLAVASIATAQQVPQPMVRLGDFIEVGNDVFMHIMATADIRYRTTENYDFDAQVRDRVANRSPVNVIPQEGGG |
| Ga0150984_1160362891 | 3300012469 | Avena Fatua Rhizosphere | MEDTIMRRLTQVALLGVLVLAMVSLAKAQQVPQPMVRLGNFMEVGNDVFMKIMASADIRYRTTENYDFDTKVRDRVNSWFPDDSVKQDAAGDL |
| Ga0137397_112849761 | 3300012685 | Vadose Zone Soil | MGVLVLVGASLASAQQVPQPMVRLGDFIEVGNDVFMHIMASADIRYKTTTNWDFDSNVRDRVQSRNPSDTIPQDGEGDLTWAELRLGVEAKYQKN |
| Ga0137404_109413872 | 3300012929 | Vadose Zone Soil | MEDTTMRRLTQVALLGVLVLAMASLATAQQVPQPVVRVGNFIEVGNDVFMKIIATADIRYRTAENYDFDNKVRDRVSGRAPDDGPPQDGSGDLTYAELRLGVEAKYQKNLTLYLLFEHQ |
| Ga0137407_100143081 | 3300012930 | Vadose Zone Soil | MIRRLAQVAMMGVLVLAVASVATAQQVPQPMARLSNFIEVGNDVFMHIIASADIRYKTVTNYDFDNNVRDRTPDRSPSSTASQEGESDLSYAELRLGVEARYQKN |
| Ga0137407_122292571 | 3300012930 | Vadose Zone Soil | MTRRFVQIALVCIVMLGMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGVRDRTSSRSPSSTSAQEGEFDGTYAELRLGVEAKYQKNLTLYLLFEHQQIFDG |
| Ga0126369_130362321 | 3300012971 | Tropical Forest Soil | MHGMKCSSNAREGKTMKRMTPIVLGGVLLLVVASLATAQQAMQPMVRLGDFMEVGNDVFMHIMATADIRYRTTENYDFDTKVRDRTNSRFPGDTVVQEGAGDETWAEL |
| Ga0134073_103109641 | 3300015356 | Grasslands Soil | VSVLVLAAVSLATAQRAPEPVARIGNFIEVGNDVFMHIMAQADIRYRTTENYDFDSRVRDRVSSRSPSSTVVQEGEFDGTYAELRLGVEARYQKN |
| Ga0134089_105766721 | 3300015358 | Grasslands Soil | MLVVASMAAAQQAPQPMVRLGNFIEVGNDVFMHIMAQADIRYRTTENYDFDSRVRDRVSSRSPSSTVVQEGEFDGTYAELRLG |
| Ga0132258_109107984 | 3300015371 | Arabidopsis Rhizosphere | MPKRLTQVVPVGVIVLAVAVMAAAQQPPQPVVRLGNFLEVGNDIFMHILASADIRYRTTQNWDFENKVRDRPASRNPSSTSVHEGDSDMSYAELRLGVDARYQKNLSMTLLFEQQQIFDG |
| Ga0184609_103423981 | 3300018076 | Groundwater Sediment | MMKHLVQVALMGVLVVASVATAQQVPQPVVRTGNFIEVGTDVLMHIMASADIRYKTVHNYDFDDKVRDRTPDRSPSSTGSQEGESDLSYAELRLGVE |
| Ga0184629_102045551 | 3300018084 | Groundwater Sediment | MAKSLTQVVLVSVIVLALAALAAAQQTPQPVVRLGNFIEVGNDIFMHIIGSADIRYHTVHNWDFENNVRDRPASRNPGNISVHEGDGDISYAELRLGVEARYQKNLSMTLLFEQQQV |
| Ga0180116_12856941 | 3300019229 | Groundwater Sediment | MRRLIQVALLGVLVLAMASLATAQQVPQPMVRLGNFIEVGNDVFMKIMASGESRYRTTENYDFDTKVRDRTNSRFPGDTVAINAESDLLSYQVRLGVEAKYQKNL |
| Ga0180117_12189172 | 3300019248 | Groundwater Sediment | MRRRFVQIALVSVVVLTVASMVAAQQVPQPVVRLGNFFEVGNDVFMKIIAAADIRYRTTENYDFDSRVRDRTATRNPTSTSPHEGESDLSYAELRLGVE |
| Ga0184648_11589861 | 3300019249 | Groundwater Sediment | MTRRLAQIALMGVLVLGVASLATAQQVPQPVVRLGNFIEVGNDVFMHIIGTADIRYKTTENRDFESRVRDRVNRREPGDSVVHEGEGD |
| Ga0184643_10669021 | 3300019255 | Groundwater Sediment | MTRRFVQIALVCVVMLVVASMAAAQQVPQPMVRLGNFIEVGNDVFMHITAAADIRYRTTTNWDFDSRVRDRTPSRFPGDTVTQEGEFDG |
| Ga0184643_14170121 | 3300019255 | Groundwater Sediment | MRRLTQVALMGVLVLGVASLATAQQVPQPVVRLGNSIEVGNDVFMKIMATADIRYHTTDNYDFDSRVRERVNSRVPDDTVVQDGSGDITWAELRLGVEAKYQKNLTLYLLFEHQQ |
| Ga0184646_10696522 | 3300019259 | Groundwater Sediment | MRRLTQVALMGVLVLGIASLATAQQVPQPVVRLGNFFEVGNDVFMKIMATADIRYHTTENYDFDSRVRERVSGREPDNTVVQDGSGDITWAELRLGVEARYQKTLTL |
| Ga0184646_13586131 | 3300019259 | Groundwater Sediment | MTRCFVQIALVCIVVLGMASLAAAQQVPQPVVRLGNFIEVGNDVFMRIMAAADIRYRTTENYDFDSRVRDRTATRSPSSTSPHEGEGDL |
| Ga0184642_10824921 | 3300019279 | Groundwater Sediment | MTRRFVQIALMGVLVLGVASLATAQQVPEPMVRLGNFIEVGNDVFMHIMAAADIRYRTTTDYDFDKKVRDRTNSRFPGDTVAQEAEFDGTYAELRLGVEAKYQKNLT |
| Ga0184642_12447111 | 3300019279 | Groundwater Sediment | MRRLTQVALMGVLVLGVASLATAQQVPQPVVRLGNFIEVGNDVFMKIMATADIRYRTTTNYDFESRVRERVNSRLPDDTVVEDGSGDETWAELRLGV |
| Ga0184642_16004771 | 3300019279 | Groundwater Sediment | MTRRFAQIALVCIVMLAVVPIAAAQQAPQPMVRLGNFIEVGNDVFMKITAAADIRYRTTTDYDFDSRVRDRVSSRSPSSTVVQEGEFDGSYAELRLGVEARYQKNLTLYLLFEHQQIFD |
| Ga0184642_16464342 | 3300019279 | Groundwater Sediment | MRRLTQVVLLGVLVLGVASLATAQQAPQPMVRLGNFIEVGNDVFMHIMATADIRYKTTENYDFASDVRDRVGDRNPTASSTQEGESDLTYAELRLGVEARYQKNL |
| Ga0180108_11518711 | 3300020066 | Groundwater Sediment | MAKSLTQVILVSVIVLALATLAVAQQTPQPVVRLGNFIEVGNDIFMHIIGSADIRYHTVHNWDFEKNVRDRPASRNPGNISVHEGDGDISYAELRLGVEA |
| Ga0222624_14117991 | 3300021951 | Groundwater Sediment | MTRRFVQIALVCIVMLGVASLATAQQMPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDSSVRDRVSSRSPSSTVVQEGEFDGAYAELRLGVEARYQKNLTLY |
| Ga0222624_15438271 | 3300021951 | Groundwater Sediment | MRRLTQVALLGVLVLGVASLATAQQVPQPMVRLGNFIEVGNDVFMHIMATADIRYRTTENYDFDAQVRDRTASRNPTNSSPQEGESDLSYAELRLGVEARYQKNLTLYLLFEH |
| Ga0222625_11382402 | 3300022195 | Groundwater Sediment | MIRRFVQIALVCVVVLGMASLAAAQQAPQPVVRLGDFIEVGNDVFMHIIGSADIRYKTTENGDFEGGVRDRPSTRSPSNSTSQEGDSDLSWA |
| Ga0222625_17574292 | 3300022195 | Groundwater Sediment | MRRLTQVVLIGVLVLAAASLATAQQAPQPMVRLGNFIEVGNDVFMHIMATADIRYKTTENYDFASDVRDRVGDRNPTAAATQEGESDLTYAELRLGVEAKYQKNLTL |
| (restricted) Ga0233424_101821442 | 3300023208 | Freshwater | MRRLAQIALIGILALAAASLAGAQQMPQPMVRLGDFIEVGNDVFMHIMASADIRYKTIENDDFEGRVRDRTSSRNPNATDTQDLADATWAELRLGAEFRYKKNL |
| Ga0207668_117964711 | 3300025972 | Switchgrass Rhizosphere | MMRRLTQLVLIVVVVLGAATLATAQQALQPVARLGNFIEVGNDVFMHIISSADIRYKTVQNFDFEQNVRDRTSSRFPGSTTEHEGEGDLSYAELRLGA |
| Ga0209058_11232532 | 3300026536 | Soil | MRRLTQIALMGVLVLMVASLASAQQVPEPMVRLGNFIEVGNDVFMHIMAAIDTRYRTTENYDFDSKVRDRVSSRFPGDTVAMNASGDLL |
| Ga0209857_10598111 | 3300027957 | Groundwater Sand | MRRLTQGALLGVLLLGVVSLAAAQQVPQPVVRLGNFTEVANDVFMHIIGVADIRYKTVENFDFENRVRDRVNDRSPSASSTQEADSDVTWARLRFGIDVQYQKNLSLNLLFEH |
| Ga0268264_117316891 | 3300028381 | Switchgrass Rhizosphere | MPKHLTQVVLVGVIVLVVAVMAAAQQPPQPVVRLGNFLEVGNDIFMHILASADIRYRTTQNWDFENKVRDRPASRNPSSTSLHEGDSDMSYAELRLGVEARYQKNLSMTLLFEQQQIF |
| Ga0247647_11604051 | 3300030570 | Soil | MLKRLTQVVLVGVIVLAVAALAAAQQTLQPVVRLGNFLEVGNDVFMHIIATADIRYRTVQNWDFENNVRDRPTSRNPSNTSAQEGDDDILYAELRLGVEARYQKNLSMTLLFEQQQVFDGQLIDDRSNASNPGGTEARKR |
| Ga0247652_10942271 | 3300030571 | Soil | MLKHLTQAVLVGVIVLAIAALAVAQQTPQPVVRLGNFIEVGNDVFMHIIGAADIRYHTVHNWDFENNVRDRPASRNPSFTSVHEGDGDILYAELRLGVEARYQKNLSMTLLFEQQQVFTKKKKEK |
| Ga0247651_101553071 | 3300030608 | Soil | MLKHLTQAVLVGVIVLAIAALAVAQQTPQPVVRLGNFIEVGNDVFMHIIGAADIRYHTVHNWDFENNVRDRPASRNPSFTSVHEGDGDILYAELRLGVEARYQKNLSMTLLFEQQQIFDGQLIDDRSNASTPGGTE |
| Ga0247629_103098291 | 3300030628 | Soil | MLKRWTQVVLVGVIVLAVAPPAAAQQTLQPVVRLGNYIEVGNDVFMHIIASADIRYRTVENWDFEKNVRDRTGTRSPTNTTVHEGDGDIMYAELRLGVEARYQKNLSMTLLFEQQQIFKK |
| Ga0102757_113363761 | 3300030785 | Soil | MRRLTQVALMSVLVLGAASLALAQQTPQPMVRLGNFFEVGNDVFMHIMASADIRYKTTQNWDFEEKVRDRTNSRFPNDVVTHDAEGDLSW |
| Ga0308203_10262471 | 3300030829 | Soil | MRRLTQVALMGVLVLGVASLATAQQVPQPVVRLGNSIEVGNDVFMKIMATADIRYHTTDNYDFDSRVRERVNSRVPDDTVVQDASGDITW |
| Ga0308205_10221621 | 3300030830 | Soil | MTRRFVQIALVCIVVLGMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDGNVRDRTASRSPSNSSAQEGEFDGTYAELRLGVEAKYQRSR |
| Ga0308152_1087651 | 3300030831 | Soil | MTRRFVQIALVGVVLAVASMTAAQQVPQPMVRLGNFIEVGNDVFMHIMAQADIRYRTTENYDFDSRVRDRVNSRFPSDTTVHEGEFD |
| Ga0308202_11352341 | 3300030902 | Soil | MRRLTQVALLGVLVLVLAMASLATAQQVPQPMVRLGNFIEVGNDVFMHIMATADIRYKTTENFDFASDVRDQVNNRAPTSTTTHEGDGYLTFAELLLGVEARYQKNLKL |
| Ga0308206_10484342 | 3300030903 | Soil | MRRLTQVALLGVLVLAMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMASADIRYRTTENYDFDSQIRDRTSSRSPSNSGPQDGESDLSWAELR |
| Ga0308206_11945371 | 3300030903 | Soil | MTRRFVQIALVGVVMLAMASFATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTVENYDFDAQVRDRTASRSPSNTSPHEGESDLSYAELRLGVEAKYQKNLTLYLLFEHQQI |
| Ga0308198_10382381 | 3300030904 | Soil | MTRRFVQIALMGVLVLGVASLATAQQVPEPMVRLGNFIEVGNDVFMHIMAAADIRYRTTTDYDFDKKVRDRTNSRFPGDTVAQEAEFDGTYAELRLGVEAKYQKNLTLYLLFEHQQIFDG |
| Ga0308200_10163792 | 3300030905 | Soil | MRRLTQVALLGVLVLAMASPATAQQVPQPMVRLGNFIEVGNDVFMHIMATADIRYHTTENFDFDTKVRDRVNSRGSGDVTPQESSGDLTWAELRLGVEARYQKN |
| Ga0308200_10901841 | 3300030905 | Soil | MIRRFVQIALVGVVMLAMASFATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDAQLRDRTQGRSPTEPAVQESWWDGTYAELRLG |
| Ga0308154_1087051 | 3300030986 | Soil | MRRLTQVALLGVLVLAMASLATAQQVPQPMVRLGNFIEVGNDVFMHIMASADIRYRTTENYDFDSQIRDRTSSRSPSNSGPQDGESDLSWAELRLGVEARYQKN |
| Ga0308155_10332941 | 3300030987 | Soil | MRRLTQVALMGVLVLGVASLATAQQVPQPVVRLGNSIEVGNDVFMKIMATADIRYHTTDNYDFDSRVRERVNSRVPDDTVVQDGSGDITWAELRLGVEAKY |
| Ga0308196_10522891 | 3300030989 | Soil | MTRRFVQIALVCVVLLGMASLAAAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDSSVRDRVSSRSPSSTVVQEGEFDGTYAELRLGVEAKYQKN |
| Ga0308190_11050771 | 3300030993 | Soil | MTRRFVQIALMGVLVLGVASLATAQQMPEPMVRLGNFIEVGNDVFMHIMASADIRYRTTTDYDFDKKVRDRTNSRFPGDTVAQEAEFDGTY |
| Ga0308190_11077001 | 3300030993 | Soil | MTRRFVQIALMGVLVLGVASLATAQQVPEPMVRLGNFIEVGNDVFMHIMAAADIRYRTTTDYDFDKKVRDRTNSRFPGDTVAQEAEFDGTY |
| Ga0308190_11179941 | 3300030993 | Soil | MIRRFVQIALVGVVMLAMASFATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDAQVRDRTQGRSPTEPAVQES |
| Ga0102746_108535051 | 3300031054 | Soil | MMRRLTQLVLIVVVVLGVATLAAAQQALQPVVRLGNFIEVGNDVFMHIIATEDIRYKTVQNYDFEGQVRDRTSSRSPSSSSAQEGESDAMYAES |
| Ga0308189_104913261 | 3300031058 | Soil | MTRRFVQIALVCVVLLGMASLATAQQVPQPMVRLGNFIEVGNDVFMKITAAADIRYRTTTDYDFDSRVRDRVSSRSPSSTVVQEGEFDGSYAELRLGVE |
| Ga0308185_10518911 | 3300031081 | Soil | MTRRLAQIALMGVLVLGVASLATAQQVPQPVVRLGNFIEVGNDVFMHIMGSADIRYRTTQNWDFEGKVRDRTNSRFPGDTVTHDAEGD |
| Ga0308201_102359101 | 3300031091 | Soil | MTRRFVQIALVCVVMLAVVSMATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFESGIRDRTSSRSPSSTSAQEGEFDGTYAELRL |
| Ga0308201_103901991 | 3300031091 | Soil | MTRRFVQIALMGVLVLGVASLATAQQVPEPMVRLGNFIEVGNDVFMHIMAAADIRYRTTTDYDFDKKVRDRTNSRFPGDTVAQEAEFDGTYAELRLGVEAKYQKNLTLYLLFEHQQIF |
| Ga0308204_102040991 | 3300031092 | Soil | MKRRFVQITLMGVVMLAVASMATAQQVPQPMVRLGDFIEVGNDVFMKITAAADIRYRTTTDYDFDSRVRDRVSSRSPSSTVVQEGEFDGAYAELR |
| Ga0308197_101674221 | 3300031093 | Soil | LRRLTQIALIGVLVLAAASLATAQQVPQPMVRLGNFIEVGNDVFMHIMAAADIRYKTTENYDFSSRVRDRVGDRNPTASSTQEGESDLSYAELRLGVEAKYQ |
| Ga0308197_102354682 | 3300031093 | Soil | MRRLTQVALMGVMVLVVVSLATAQQVPQPMVRLGNFMEVGNDVFMKIMATADIRYKTTENFDFASDVRDQVNNRAPTSTTTHEGEGDLTFAELRLGVEARYQKNL |
| Ga0308197_102491121 | 3300031093 | Soil | MTRRFVQIALMGVLVLGVASLATAQQVPEPMVRLGNFIEVGNDVFMHIMAAADIRYRTTTDYDFDKKVRDRTNSRFPGDTVAQEAEFDGTYAEL |
| Ga0308197_103391821 | 3300031093 | Soil | MRRLTQVALLGVVMLVLASFATAQQVPQPMVRLGDFIEVGNDVFMHIMATADIRYRTTENYDFDAQVRDRVASRNPSSTVVQEGAFDGTYAELRLGVEAKYQKNLTLYLLFEHQQTFDGNTI |
| Ga0308197_104782721 | 3300031093 | Soil | MRRLTQVALMGVLVLGVASLATAQQAPQPVVRLGNFIEVGNDVFMHIMATADIRYRTTTNYDFESRVRERVNSRLPDDTVVEDGSGDETWAELRLGVEA |
| Ga0308199_10514891 | 3300031094 | Soil | MRRLAQVALMGVLVLGMASLVMAQQVPQPVVRLGNFIEVGNDVFMHIIGTADIRYKTTENYDFESKVRDRVNSRFPGDVVTQDASGDLS |
| Ga0308199_11161851 | 3300031094 | Soil | MTRRLAQIALMGVLVLGVASLATAQQVPQPVVRLGNFIEVGNDVFMHIIGTADIRYRTTQNWDFEGKVRDRTNSRSPSDTVNHDAEGDLSFA |
| Ga0308199_11214041 | 3300031094 | Soil | MTRRFVQIALVGVVVLAVASLATAQQVPQPMVRLGNFIEVGNDVFMKIIAAADIRYRTTENYDFDSRVRDRTATRSPSSTSPHE |
| Ga0308199_11270101 | 3300031094 | Soil | MTRRFVQIALVGVVVLAVASMATAQQVPQPMVRLGNFIEVGNDVFMKIIAAADIRYRTTENYDFDSRVRDRTATRSPSSTSP |
| Ga0308193_10722561 | 3300031096 | Soil | MTRRLAQIALMGVLVLAAAALATAQQVPQPVVRLGNFIEVGNDVFMHIIGSADIRYRTTSNYDFESKVRERVNSRFPGDVVTEDASSDLTWAELR |
| Ga0308188_10127131 | 3300031097 | Soil | LRRLTQIALIGVLVLAAASLATAQQVPQPMVRLGNFIEVGNDVFMHIMAAADIRYKTVENLDFQSRVRDRTNSRSSSSSSTQEGDSDLSYAELRLGVEARYQKNLTLYLL |
| Ga0308188_10197741 | 3300031097 | Soil | MTRRFVQIALVCVVLLGMASLAAAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDGNVRDRTASRSPSNSSAQEGEFDGTYAELRP |
| Ga0308188_10342051 | 3300031097 | Soil | MRRLTQVALMGVLVLGVASLATAQQVPQPVVRLGNSIEVGNDVFMKIMATADIRYHTTENFDFDTKVRDRTVSRGPGDVNAEEASGDL |
| Ga0308188_10398581 | 3300031097 | Soil | MRRLIQVALLGVLVLAMASLATAQQVPQPMVRLGNFIEVGNDVFMHIMASADIRYHTTTNWDFDSKVRDRPGSRFPDDATQQDGESDLTWAELRLGVEARYQK |
| Ga0308181_10835751 | 3300031099 | Soil | MIRRFVQIALVGVVMLAMASFATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDAQVRDRTQGRSPTEPAVQESWWDGTYAELRLGVEAKYQKNL |
| Ga0308187_101406471 | 3300031114 | Soil | MKRLAPIALGSILLLVVVSLATAQQVPQPMVRLGNFIEVGNDVFMHIMATADIRYRATENYDFDSKVRDRTSSRFPNSTVVQDA |
| Ga0308182_10062671 | 3300031125 | Soil | MRRLTQVALMGVLVLGVASLATAQQVPQPVVRLGNSIEVGNDVFMKIMATADIRYHTTDNYDFDSRVRERVNSRVPDDTVVQDGSGD |
| Ga0308182_10172761 | 3300031125 | Soil | MTRRFVQIALVCVLMLVVASMATAQQAPQPMVRLGNFIEVGNDVFMHIMAQADIRYRTTENYDFDSRVRDRVNSRFPSDTTVHEGEFDGT |
| Ga0308194_100006861 | 3300031421 | Soil | MRRLTQVALMGVLALGMASLAAAQQVPEPMVRLGNFIEVGNDVFMHIMASADIRYRTTTNYDFDSRVRERVNSRFPADVVTEDASGDLTWAELRLGVEARY |
| Ga0308194_100513442 | 3300031421 | Soil | MRRLAQVALMGVLGLVVASLATAQQVPQPVVRLGNFIEVGNDVFMHIMASSDIRYRTTTNYDFEGNVRDRVNSRFPGDTVTGNAAGDILFVQNRLGAEF |
| Ga0308194_101530532 | 3300031421 | Soil | LRRLTQIALIGVLVLAAASLATAQQVPQPMVRLGNFIEVGNDVFMHIMAAADIRYKTTENYDFSSRVRDRVGDRNPTASSTQEGESDLSYAELRLGVEAKYQKNLTLYLLFEHQ |
| Ga0308194_101674051 | 3300031421 | Soil | MTRRFVQIALMGVLVLGVASLATAQQVPEPMVRLGNFIEVGNDVFMHIMAAADIRYRTTTDYDFDKKVRDRTNSRFPGDTVAQEAEFDGTYAELRLGVEAKYQKNL |
| Ga0308194_102087191 | 3300031421 | Soil | MTRRLAQIALMGVLVLGVASLATAQQVPQPVVRLGNFIEVGNDVFMHIIGTADIRYRTTQNWDFEGKVRDRTNSRSPSDTVNHDAEGDLSFAELRLGAEFKYQKN |
| Ga0308186_10314161 | 3300031422 | Soil | MRRLTQVALMGVLVLGVASLATAQQVPQPVVRLGNSIEVGNDVFMKIMATADIRYHTTDNYDFDSRVRERVNSRVPDDTVVQDGS |
| Ga0308179_10027142 | 3300031424 | Soil | MRRLTQVVLIGVLVLAAASLATAQQAPQPMVRLGNFIEVGNDVFMHIMASADIRYKTTENYDFASDVRDRVGDRNPTAAATQEGESD |
| Ga0308179_10107851 | 3300031424 | Soil | MRRLTQVALLGVLVLGVASLATAQQVPQPMVRLGNFIEVGNDVFMHITAAADIRYRTVTNYDFDSGVRDRVGSRSPTEAATQESEFDGTYAELRLGVEA |
| Ga0308179_10308802 | 3300031424 | Soil | MRRLTQVALLSVLVLVLVVASLATAQQVPQPMVRLGNFIEVGNDVFMHIMATADIRYRTTEGYDFERRVRERVSSRNPSNTVPQEGSGDLTWAELRLGVEARYQKNL |
| Ga0308150_10444262 | 3300031505 | Soil | MRRLTQVALLGVLVLAMASLATAQQVPQPMVRLGDFIEVGNDVFMHIMASADIRYRTTENYDFDSQIRDRTSSRSPSNSGPQDGESD |
| Ga0370545_087494_1_318 | 3300034643 | Soil | MTRRFVQIALVGVVVLAVASMAAAQQVPQPMVRLGNFIEVGNDVFMKIMAAADIRYRTTENYDFDSRVRDRTATRNPSSTSPHEGESDLSYAELRLGVEAKYQKNL |
| Ga0370548_000753_2498_2812 | 3300034644 | Soil | MRRLTQVALLGVLVLAMASLATAQQVPQPMVRLGNFIEVGNDVFMHIMATADIRYHTTENFDFDTKVRERVNSRGPGDVTPQESSGDLTWAELRLGVEARYQKNL |
| Ga0370548_075109_363_644 | 3300034644 | Soil | MTRRFVQIALMGVLVLGVASLATAQQMPEPMVRLGNFIEVGNDVFMHIMASADIRYRTTTDYDFDKKVRDRTNSRFPGDTVAQEAEFDGTYAEL |
| Ga0370548_085287_351_617 | 3300034644 | Soil | MTRRFVQIALMGVLVLGVASLATAQQVPEPMVRLGNFIVVGNDVFMQIMAAADFRYRTSTEYDFDKKVRDRTNSRFPGDTVAQEAEFDG |
| Ga0370548_087819_303_611 | 3300034644 | Soil | MRRLTQVVLIGVLVLAAASLATAQQAPQPMVRLGNFIEVGNDVFMHIMAAADIRYKTVENYDFASDVRDRVNSRNPSSTTSQEGEGDLTYAELRLGVEARYQK |
| Ga0314782_149781_2_277 | 3300034661 | Soil | MIRRFVQIALVGVVMLAMASFATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDAQVRDRTPSRSPSSTETQEAWWDGTYA |
| Ga0314786_116957_3_341 | 3300034664 | Soil | VELPTAIDVQWRKVEAMMRRLTQLVLMGVVVLGVAALAAAQETPQPVVRLGNFIEVGNDVFMHIIGSADIRYKTVENFDFEGQVRDRTSSRSPSSTTSHEGEGDLSFAELRLG |
| Ga0314798_097674_2_274 | 3300034673 | Soil | MIRRFVQLALVGVVMLAMASFATAQQVPQPMVRLGDFIEVGNDVFIHIMAAGESRYRTTENYDFDTKVRDRVNSRFPGDTVVHDGAGDETW |
| Ga0314803_104813_303_557 | 3300034678 | Soil | MIRRFVQIALVGVVMLAMASFATAQQVPQPMVRLGDFIEVGNDVFMHIMAAADIRYRTTENYDFDAQVRDRTSSRSPSNTVVQEG |
| Ga0370541_023003_1_321 | 3300034680 | Soil | MGVLVLAVASLATAQQVPEPMVRLGNFIEVGNDVFMHIMAAADIRYKTVENYDFSSRVRDRTNSRNPSSSSTQEGDSDLSYAELRLGVEAKYQKNLTLYLLFEHQQI |
| Ga0370541_031965_385_636 | 3300034680 | Soil | MASLAAAQQVPEPMVRLGNFIEVGNDVFMHIMASADIRYRTTTNYDFDSRVRERVNSRFPADVVTEDASGDLTWAELRLGVEAR |
| Ga0370546_018700_1_294 | 3300034681 | Soil | MVRLGNFIEVGNDVFMHIIAAADIRYLTVTNRDFESRVRDRAHAREPNGAATRESEGDITQAELRLGVEARYQKNLTLYLLFEHQQIFDGNTIDDRSN |
| Ga0370546_025194_1_252 | 3300034681 | Soil | VLVLGVASLATAQQAPQPMVRLGNFIEVGNDVFMHIMATADIRYKTTENYDFASDVRDRVGDRNPTAAATQEGESDLTYAELRL |
| Ga0370546_037631_1_234 | 3300034681 | Soil | VSLATAQQVPEPMVRLGNFIEVGNDVFMHIMAAADIRYKTTENYDFASDVRDRVGDRNPTAAATQEGESDLTYAELRL |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |