Metagenome Family F049512

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049512
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	74 residues
Representative Sequence	MKFQSLFVGAVFLAGCASQQPPGSNEPKSQRNYNRDLYECEREATFAGAGNKQQVFDNCMKARGYKPKG
Number of Associated Samples	104
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.81 %
% of genes near scaffold ends (potentially truncated)	21.23 %
% of genes from short scaffolds (< 2000 bps)	78.08 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.753 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.438 % of family members)
Environment Ontology (ENVO)	Unclassified (21.918 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.781 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.84% β-sheet: 0.00% Coil/Unstructured: 72.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF02586	SRAP	8.90
PF08309	LVIVD	5.48
PF04392	ABC_sub_bind	4.79
PF00072	Response_reg	2.74
PF00903	Glyoxalase	2.05
PF04026	SpoVG	1.37
PF04679	DNA_ligase_A_C	1.37
PF13185	GAF_2	1.37
PF05494	MlaC	0.68
PF02867	Ribonuc_red_lgC	0.68
PF07638	Sigma70_ECF	0.68
PF02800	Gp_dh_C	0.68
PF07077	DUF1345	0.68
PF08139	LPAM_1	0.68
PF13419	HAD_2	0.68
PF00890	FAD_binding_2	0.68
PF00378	ECH_1	0.68
PF00848	Ring_hydroxyl_A	0.68
PF14559	TPR_19	0.68
PF04972	BON	0.68
PF12833	HTH_18	0.68
PF07992	Pyr_redox_2	0.68
PF09084	NMT1	0.68
PF13483	Lactamase_B_3	0.68
PF00583	Acetyltransf_1	0.68
PF13458	Peripla_BP_6	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	8.90
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	5.48
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.79
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.37
COG2088	DNA- and RNA-binding protein SpoVG, cell septation regulator	Transcription [K]	1.37
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.37
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.68
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.68
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.68
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.68
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.68
COG4291	Uncharacterized membrane protein	Function unknown [S]	0.68
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.44 %
Unclassified	root	N/A	33.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.75 %
Unclassified	root	N/A	33.56 %
Viruses	superkingdom	All Organisms → Viruses	0.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.75 %
Unclassified	root	N/A	33.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.03 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	10.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	17.12 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	10.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.37 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	17.12 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	10.96 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.37 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.56 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	16.44 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.96 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	3.42 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	16.44 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.96 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	3.42 %
Noviherbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum	2.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	16.44 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10.96 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	3.42 %
Noviherbaspirillum sedimenti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum sedimenti	2.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.37 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0634220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300000550\|F24TB_11928170	Not Available	1405	Open in IMG/M
3300000559\|F14TC_100239125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	857	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1019462	Not Available	1080	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10012258	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300000956\|JGI10216J12902_116704980	Not Available	1202	Open in IMG/M
3300002899\|JGIcombinedJ43975_10010579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1480	Open in IMG/M
3300003911\|JGI25405J52794_10008199	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1945	Open in IMG/M
3300003911\|JGI25405J52794_10054575	Not Available	859	Open in IMG/M
3300004019\|Ga0055439_10034830	Not Available	1298	Open in IMG/M
3300004268\|Ga0066398_10202065	Not Available	525	Open in IMG/M
3300004281\|Ga0066397_10049828	Not Available	752	Open in IMG/M
3300004633\|Ga0066395_10351799	Not Available	819	Open in IMG/M
3300005167\|Ga0066672_10255399	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300005169\|Ga0066810_10031759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	948	Open in IMG/M
3300005174\|Ga0066680_10748688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300005186\|Ga0066676_10413187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	911	Open in IMG/M
3300005289\|Ga0065704_10468618	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005294\|Ga0065705_10067294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300005294\|Ga0065705_10767271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300005295\|Ga0065707_10178904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1431	Open in IMG/M
3300005332\|Ga0066388_102189881	Not Available	997	Open in IMG/M
3300005332\|Ga0066388_102357146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	964	Open in IMG/M
3300005332\|Ga0066388_102400503	Not Available	956	Open in IMG/M
3300005332\|Ga0066388_107342063	Not Available	553	Open in IMG/M
3300005445\|Ga0070708_100049593	All Organisms → cellular organisms → Bacteria	3715	Open in IMG/M
3300005445\|Ga0070708_100993821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	787	Open in IMG/M
3300005447\|Ga0066689_10115836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1557	Open in IMG/M
3300005457\|Ga0070662_101971712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum sedimenti	504	Open in IMG/M
3300005467\|Ga0070706_101021750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300005468\|Ga0070707_100314602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1522	Open in IMG/M
3300005518\|Ga0070699_100332047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1368	Open in IMG/M
3300005518\|Ga0070699_100936401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	794	Open in IMG/M
3300005557\|Ga0066704_11020760	Not Available	510	Open in IMG/M
3300005559\|Ga0066700_10335653	Not Available	1067	Open in IMG/M
3300005559\|Ga0066700_10788971	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300005713\|Ga0066905_100293991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1272	Open in IMG/M
3300005713\|Ga0066905_100555919	Not Available	964	Open in IMG/M
3300005713\|Ga0066905_101917666	Not Available	548	Open in IMG/M
3300005713\|Ga0066905_102205378	Not Available	514	Open in IMG/M
3300005937\|Ga0081455_10212487	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300005981\|Ga0081538_10052076	Not Available	2450	Open in IMG/M
3300006049\|Ga0075417_10012719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3177	Open in IMG/M
3300006049\|Ga0075417_10165371	Not Available	1035	Open in IMG/M
3300006049\|Ga0075417_10574729	Not Available	571	Open in IMG/M
3300006797\|Ga0066659_10120973	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300006797\|Ga0066659_11726622	Not Available	528	Open in IMG/M
3300006844\|Ga0075428_100127948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2763	Open in IMG/M
3300006844\|Ga0075428_100495338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1307	Open in IMG/M
3300006844\|Ga0075428_101571686	Not Available	688	Open in IMG/M
3300006852\|Ga0075433_10027859	All Organisms → cellular organisms → Bacteria	4798	Open in IMG/M
3300006854\|Ga0075425_100138150	All Organisms → cellular organisms → Bacteria	2788	Open in IMG/M
3300006871\|Ga0075434_100180583	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300006903\|Ga0075426_10141276	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300006903\|Ga0075426_10251664	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300006904\|Ga0075424_100218836	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300006969\|Ga0075419_10118423	Not Available	1713	Open in IMG/M
3300006969\|Ga0075419_11256610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300007076\|Ga0075435_100527667	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300007076\|Ga0075435_100562685	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300007255\|Ga0099791_10259212	Not Available	826	Open in IMG/M
3300007255\|Ga0099791_10654406	Not Available	516	Open in IMG/M
3300009012\|Ga0066710_102642243	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300009081\|Ga0105098_10475077	Not Available	633	Open in IMG/M
3300009094\|Ga0111539_10357534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum sedimenti	1699	Open in IMG/M
3300009100\|Ga0075418_10168358	All Organisms → cellular organisms → Bacteria → Proteobacteria	2333	Open in IMG/M
3300009100\|Ga0075418_11617712	Not Available	704	Open in IMG/M
3300009100\|Ga0075418_12617049	Not Available	551	Open in IMG/M
3300009147\|Ga0114129_10072416	All Organisms → cellular organisms → Bacteria	4804	Open in IMG/M
3300009147\|Ga0114129_10166166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum sedimenti	3011	Open in IMG/M
3300009147\|Ga0114129_12212913	Not Available	661	Open in IMG/M
3300009157\|Ga0105092_10042855	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300009157\|Ga0105092_10064319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1981	Open in IMG/M
3300009807\|Ga0105061_1081416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300009818\|Ga0105072_1092881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300010047\|Ga0126382_10110282	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300010047\|Ga0126382_11018255	Not Available	727	Open in IMG/M
3300010047\|Ga0126382_12450817	Not Available	508	Open in IMG/M
3300010358\|Ga0126370_10360215	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1179	Open in IMG/M
3300010359\|Ga0126376_10545065	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300010376\|Ga0126381_101764420	Not Available	894	Open in IMG/M
3300010863\|Ga0124850_1016788	All Organisms → cellular organisms → Bacteria	2334	Open in IMG/M
3300011398\|Ga0137348_1030439	Not Available	876	Open in IMG/M
3300012160\|Ga0137349_1006401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1640	Open in IMG/M
3300012205\|Ga0137362_10480194	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300012205\|Ga0137362_11316929	Not Available	608	Open in IMG/M
3300012208\|Ga0137376_10208241	All Organisms → Viruses → Predicted Viral	1692	Open in IMG/M
3300012211\|Ga0137377_10095311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2814	Open in IMG/M
3300012211\|Ga0137377_10594342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1044	Open in IMG/M
3300012350\|Ga0137372_10004392	All Organisms → cellular organisms → Bacteria	13734	Open in IMG/M
3300012356\|Ga0137371_11051162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300012362\|Ga0137361_11382552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300012362\|Ga0137361_11411250	Not Available	619	Open in IMG/M
3300012582\|Ga0137358_10767179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	643	Open in IMG/M
3300012685\|Ga0137397_10045219	All Organisms → cellular organisms → Bacteria	3149	Open in IMG/M
3300012685\|Ga0137397_10467637	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300012922\|Ga0137394_10011251	All Organisms → cellular organisms → Bacteria	7005	Open in IMG/M
3300012922\|Ga0137394_10516445	Not Available	1014	Open in IMG/M
3300012929\|Ga0137404_10200560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1690	Open in IMG/M
3300012929\|Ga0137404_10582811	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300012930\|Ga0137407_10023077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Noviherbaspirillum → Noviherbaspirillum sedimenti	4717	Open in IMG/M
3300012931\|Ga0153915_10051332	All Organisms → cellular organisms → Bacteria	4231	Open in IMG/M
3300012937\|Ga0162653_100084151	Not Available	523	Open in IMG/M
3300012948\|Ga0126375_10766333	Not Available	760	Open in IMG/M
3300012971\|Ga0126369_12920775	Not Available	560	Open in IMG/M
3300012972\|Ga0134077_10592370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300012989\|Ga0164305_10739583	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300015264\|Ga0137403_10033247	All Organisms → cellular organisms → Bacteria → Proteobacteria	5435	Open in IMG/M
3300015264\|Ga0137403_10162313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2192	Open in IMG/M
3300016319\|Ga0182033_10672778	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300016319\|Ga0182033_10697061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	889	Open in IMG/M
3300016341\|Ga0182035_11214635	Not Available	673	Open in IMG/M
3300016357\|Ga0182032_10964910	Not Available	727	Open in IMG/M
3300018052\|Ga0184638_1010613	All Organisms → cellular organisms → Bacteria	3110	Open in IMG/M
3300018053\|Ga0184626_10007001	All Organisms → cellular organisms → Bacteria	4330	Open in IMG/M
3300018053\|Ga0184626_10064195	Not Available	1544	Open in IMG/M
3300018053\|Ga0184626_10069817	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300018072\|Ga0184635_10019215	All Organisms → cellular organisms → Bacteria	2488	Open in IMG/M
3300018072\|Ga0184635_10140421	Not Available	963	Open in IMG/M
3300018072\|Ga0184635_10255153	Not Available	694	Open in IMG/M
3300018074\|Ga0184640_10386435	Not Available	632	Open in IMG/M
3300018081\|Ga0184625_10037264	Not Available	2403	Open in IMG/M
3300018089\|Ga0187774_10891342	Not Available	610	Open in IMG/M
3300018468\|Ga0066662_10280819	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1384	Open in IMG/M
3300021432\|Ga0210384_10126800	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2290	Open in IMG/M
3300021560\|Ga0126371_11253916	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	876	Open in IMG/M
3300025910\|Ga0207684_10829592	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300027646\|Ga0209466_1000912	All Organisms → cellular organisms → Bacteria	5918	Open in IMG/M
3300027722\|Ga0209819_10076000	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300027722\|Ga0209819_10183598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	730	Open in IMG/M
3300027873\|Ga0209814_10011170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3535	Open in IMG/M
3300030606\|Ga0299906_10114625	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300031720\|Ga0307469_11488662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300031740\|Ga0307468_100078561	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300031740\|Ga0307468_100094554	Not Available	1755	Open in IMG/M
3300031754\|Ga0307475_11301628	Not Available	563	Open in IMG/M
3300031820\|Ga0307473_10037587	All Organisms → cellular organisms → Bacteria	2179	Open in IMG/M
3300031820\|Ga0307473_10056474	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1892	Open in IMG/M
3300031912\|Ga0306921_10558838	All Organisms → cellular organisms → Bacteria → Proteobacteria	1327	Open in IMG/M
3300032174\|Ga0307470_10325327	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1055	Open in IMG/M
3300032180\|Ga0307471_100034309	All Organisms → cellular organisms → Bacteria	3963	Open in IMG/M
3300032261\|Ga0306920_101204029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1094	Open in IMG/M
3300032783\|Ga0335079_11734727	Not Available	609	Open in IMG/M
3300032828\|Ga0335080_10760611	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300032829\|Ga0335070_11179218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300034090\|Ga0326723_0228212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	828	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.45%
Host-Associated	Host-Associated	20.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.12%
Plants	Host-Associated → Plants	20.55%
Aquatic	Environmental → Aquatic	12.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.12%
Sediment	Environmental → Aquatic → Sediment	7.53%
Freshwater	Environmental → Aquatic → Freshwater	4.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.74%
Marine	Environmental → Aquatic → Marine	0.68%
Peat	Environmental → Terrestrial → Peat	0.68%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.68%
Roots	Host-Associated → Plants → Roots	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.44%
Loam	Environmental → Terrestrial → Soil → Loam	15.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.53%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.05%
Sand	Environmental → Terrestrial → Soil → Sand	1.37%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.05%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.37%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.16%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.05%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.05%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.05%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.37%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.37%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.68%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_06342201	2228664022	Soil	MKLRSLIVLAVFLAGCASQQPPGPNEPKIQPDYNRDLYECTREATFADISTKQQVFDNCMKARGYKPKASTD
F24TB_119281701	3300000550	Soil	MKFQSLFVGAVFLAGCASQQPPGLSDTKNPSNYNRDLYECQREATFAGRDNKQQVFDNCMKARGYTPFSTDRREWPHTQ*
F14TC_1002391251	3300000559	Soil	MKFQLLFVGAVFLAGCASQKSPGSNEPKSQRNYDRDLYECEREAAFAGAGNKQQFFDNCMKA
AF_2010_repII_A01DRAFT_10194622	3300000580	Forest Soil	MQSMANSVSLLVVVVIFLSSCATWHPLGSYEPQSQRDYNRDLYECEREATFAGGDNKQQVFDSCMKARGYAPSSTDRFEWPHTQ*
AF_2010_repII_A001DRAFT_100122584	3300000793	Forest Soil	MQGMANAVGLLVVVVIFLSSCATWHPLGSYEPQSQRDYNRDLYECEREATFAGGDNKQQVFDSCMKARGYAPSSTDRFEWPHTQ*
JGI10216J12902_1167049804	3300000956	Soil	SGCASQQPQGSSQRNYNRDLYECEREATFAGRDNKQQVFDSCMKARGYTSFSTDRPEWPHTQ*
JGIcombinedJ43975_100105794	3300002899	Soil	MKFQSLFVGAVFLAGCASQQPPGSIESKSQRNYNRDLYECQREATFAGAGNKQQVFDNCMKARGYTLKNPADR*
JGI25405J52794_100081993	3300003911	Tabebuia Heterophylla Rhizosphere	MQGMANAVSLLVVAVIFLSSCATRHPLGWYEPQSQRDYNRDLYECEREATFAGGDNKQQVFDSCMKARGYAPSSTDRFEWPHTQ*
JGI25405J52794_100545751	3300003911	Tabebuia Heterophylla Rhizosphere	MVIKMSGMANAVGLLAVAAVLLLVGCATQQTPKAIDAASPRDYNRDLYECERQATFAGVGTKQQVFDNCMKARGYKEK*
Ga0055439_100348303	3300004019	Natural And Restored Wetlands	AVFLACCACWQPLGHYEPKSEDNYNRDLYECEREAAFAGAGNKQQVFDNCMRARGYKPK*
Ga0066398_102020651	3300004268	Tropical Forest Soil	MANAVGLLVVAVMFLSSCATWQPLGSYEPQSQRDYNRDLYECERESALAGAGDKRKAFDSCMKARGY*
Ga0066397_100498282	3300004281	Tropical Forest Soil	MQSMANSVSLLVVVVIFLSSCATWHPLGSYEPQSQRDYNRDLYECEREATFAGGDNKQQVFNSCMKARGYAPSSTDRFEWPHTQ*
Ga0066395_103517991	3300004633	Tropical Forest Soil	MANSVSLLVVVVIFLSSCATWHPLGSYEPQSQRDYNRDLYECEREATFAGGDNKQQMFDSCMKARGYAPSSTDRFEWPHTQ*
Ga0066672_102553991	3300005167	Soil	IVAVMFLAGCASQQTPGSNEPKSPSNYNRDLYECEREAAFASAGNKQQVFDNCMKARGYSPFSTDRPEWPHTQ*
Ga0066810_100317591	3300005169	Soil	MKFQSLFVGAVFLAGCASQQPPGSNEPKSPSNYNRDLYECAREATFAGVGNKQQVFDNCMKARGYTLKVPTDR*
Ga0066680_107486881	3300005174	Soil	MKLRSLIVVAVFLAGCASQQPPGPNEPKIQPDYNRDLYECTREATFADIGTKQQVFDNCMKARGY
Ga0066676_104131872	3300005186	Soil	MKSRSLIVAAMFLASCASQQPPGSSDTKNPSNYNRDLYECQREATFAGRDNKQQVFDNCMKARGYREKG*
Ga0065704_104686181	3300005289	Switchgrass Rhizosphere	MKFRSLIVAAMFLAGCASQQPPGSSGTKSQGNYDRDLYECTRQATFADVGIQQQVFDNCMRARGYKEKSSSK*
Ga0065705_100672942	3300005294	Switchgrass Rhizosphere	MKFQSLFVGAMFLAGCASQQPPGSNEPKSQRNYDRDLYECEREAAFAGAGIKQQFFDNCMKARGYKLKNPADR*
Ga0065705_107672711	3300005294	Switchgrass Rhizosphere	MKFQSLFVGAVFLAGCASQQPPGSIESKSQRNYNRDLYECEREATFAGAGNKQQVFDNCMKARGYTLKNPADR*
Ga0065707_101789042	3300005295	Switchgrass Rhizosphere	MKFQSLFVGAVFLAGCASQQPPGSTESKSQRNYDRDLYQCEREATFAGAGNKQQVFDSCMKARGYKLKNPADR*
Ga0066388_1021898812	3300005332	Tropical Forest Soil	MLLASCATWRPVGSYEPQSQRDYNRDLYECEREATLAGGDSKQQVFDRCMKARGYVPSSADRFEWPHTQ*
Ga0066388_1023571461	3300005332	Tropical Forest Soil	MKFRSLIVAAMFLAGCASQQTPGSSDTKSQGNYDRDLYECTRQATFADVGIQQQVFDNCMRARGYKEKSSSK*
Ga0066388_1024005032	3300005332	Tropical Forest Soil	MANAVGLLVVAVMFLSSCATWQPLGSYEPQSQRDYNRDLYECERESALAGAGDKRKAFDSCMKARGYAPSSTDRFEWPHTQ*
Ga0066388_1073420631	3300005332	Tropical Forest Soil	MQGMANAVGLLVVAVIFLSSCASWHPLGSYEPQSQRDYNRDLYECEREATFAGGDNKQQVFDSCMKARGYAPSSTDRFEWPHTQ*
Ga0070708_1000495931	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKFRSIIVAVMFLAGCASQQPPGSNEPKSPSNYNRDLYECEREAAFAGAGNKQQVFDNCMKARGDSPFSTDRPEWPHTQ*
Ga0070708_1009938212	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLRSLIVVAVLLAGCASQQPPGPNEPKIQPDYNRDLYECTREATFADIGTKQQVFDNCMKARGYKPKAPTDR*
Ga0066689_101158363	3300005447	Soil	MKLRSLIVVAVFLAGCASQQPPGPNEPKIQPDYNRDLYECTREATFADIGTKQQVFDNCMKARGYKPKAPTDR*
Ga0070662_1019717121	3300005457	Corn Rhizosphere	KIHCMKFRSLIVAAMFLAGCASQQPPGLSDTKSQRNYNRDMYECEREAIFAGRDNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0070706_1010217502	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLRSLIVVAVLLAGCASQQPPGPNEPKIQPDYNRDLYECTREATFADIGTKQQVFDNCM
Ga0070707_1003146023	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKFQLLIAMGMFLASCAGGQLLGHSEPKSDSSYNRDLYECEREATFAGAGNKQQAFDNCMKARGYKQK*
Ga0070699_1003320471	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNFQLLIAMGMFLASCAGGQLLGHSEPKSDSSYNRDLYECEREATFAGAGNKQQAFDNCMKARGYKQK*
Ga0070699_1009364011	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	SLIVVAVLLAGCASQQPPGPNEPKIQPDYNRDLYECTREATFADIGTKQQVFDNCMKARGYKPKAPTDR*
Ga0066704_110207601	3300005557	Soil	MFLAGCASQQTPGSNEPKSPSNYNRDLYECEREAAFASAGNKQQVFDNCMKARGYSPFSTDRPEWPHTQ*
Ga0066700_103356532	3300005559	Soil	MKFQSLFVGAVFLAGCASQQPLGSNEPKSQRNYNRDLYECEREATFAGAGNKQHVFDNCMKARGYKPKG*
Ga0066700_107889712	3300005559	Soil	MKLRSLIVVAVFLAGCASQQPPGPNEPKIPPDYNRDLYECTREATFADIGTKQQVFDNCMKARGYKPKAPTDR*
Ga0066905_1002939911	3300005713	Tropical Forest Soil	MKFQSLFVGAVFLAGCASQQPAGSNEPKSQHNYDRDLYECEREAAFAGAGNKQQFFDNCMKARGYKLKNPADR*
Ga0066905_1005559192	3300005713	Tropical Forest Soil	MANSVSLLVVVVIFLSSCATWHPLGSYEPQSQRDYNRDLYECEREATFAGGDNKQQVFNSCMKARGYAPSSTDRFEWPHTQ*
Ga0066905_1019176661	3300005713	Tropical Forest Soil	MQGMAKAVGLLVVAVMFLPSCATWQPLASYEPQSQRDYNRDLYECERESALAGAGDKGKAFDSCMKARGYAPSSTDRFEWPHTQ*
Ga0066905_1022053781	3300005713	Tropical Forest Soil	VKADKIHSMKFRSLIVAAIFLAGCASQQLTGSGDTKSQGNYDRDLYECRRRATFADVGIQQQVFDNCMRAKGYKEKSSSLLLP*
Ga0081455_102124872	3300005937	Tabebuia Heterophylla Rhizosphere	MQGMANAVGLLVVAVMFLSSCATWQPLGSYEPQSQRDYNRDLYECERESALADAGDKRKAFDSCMKARGYTPSSTDRFEWPHTQ*
Ga0081538_100520763	3300005981	Tabebuia Heterophylla Rhizosphere	MFLGSCAPPWQPLGSYERQSQRNYNRDLYDCERDATLARGDNKQQVFDSCMKARGYVPSSADRFEWPHIQ*
Ga0075417_100127193	3300006049	Populus Rhizosphere	MANAVGLLVVSAIFLASCASQQPPGLSDTKSQRNYNRDLYECEREATFAGRDNKQQVFDNCMKARGYTPFSTDRPEWHHTQ*
Ga0075417_101653713	3300006049	Populus Rhizosphere	MKFQSLFVGALFLAGCASQQPSGSNASKSQRNYNRDLYECEREATFAGAGSKQQVFDNCMKARGYTLKNPADR*
Ga0075417_105747292	3300006049	Populus Rhizosphere	MKFQSLFVGALFLAGCASQQPSGSNASKSQRNYNRDLYECEREATFAGAGNKQQVFDNCMKARGYTLKNPADR*
Ga0066659_101209733	3300006797	Soil	MKFRSIIVAVMFLAGCASQQTPGSNEPKSPSNYNRDLYECEREAAFASAGNKQQVFDNCMKARGYSPFSTDRPEWPHTQ*
Ga0066659_117266221	3300006797	Soil	MKFRSFIVAVMFLAGCANQQPPGSNEPKSPSDYNRDLYECEREATFAGAGNKQHVFDNCMKARGYKPKG*
Ga0075428_1001279484	3300006844	Populus Rhizosphere	MKFRLLVVAMMLLASCAPPWHPLGSYEPQSQRDHNRDLYECEREATFAGGDNKQQVFDSCMKARGYTPSTDRFEWPHTQ*
Ga0075428_1004953382	3300006844	Populus Rhizosphere	MKFQSLFVGAVFLAGCASQQPQGSNEPKSQRNYDRDLYECEREATFAGAGKKQQVFDNCMKARGYKLKNPADR*
Ga0075428_1015716862	3300006844	Populus Rhizosphere	MKFQSLVVGTVFLAGCASQQSAGSNDPKSQRNHDRDLYECEREATFASPGNKQQVFDNCMKARGYKLKNPADR*
Ga0075433_100278594	3300006852	Populus Rhizosphere	MMLLASCAPPWHPLGSYEPQSQRDHNRDLYECEREATFAGGDNKQQVFDSCMKARGYTPSTDRFEWPHTQ*
Ga0075425_1001381503	3300006854	Populus Rhizosphere	MKFRSLIVAAMFLAGCASQQPPGSSGTNSQGNYNRDMYECEREAIFAGRDNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0075434_1001805831	3300006871	Populus Rhizosphere	MRFRLPVIAAMLLAGCASQQPPGSSGTNSQGNYNRDMYECEREAIFAGRDNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0075426_101412761	3300006903	Populus Rhizosphere	GALFLAGCASQQPSGSNASKSQRNYNRDLYECEREATFAGAGNKQQVFDNCMKARGYTLKNPADR*
Ga0075426_102516643	3300006903	Populus Rhizosphere	ATKARRMKFQLLIAMGMFLASCAGGQLLGHSEPKSDSSYNRDLYECEREATFAGAGNKQQAFDNCMKARGYKQK*
Ga0075424_1002188361	3300006904	Populus Rhizosphere	AMFLAGCASQQPPGSSGTNSQGNYNRDMYECEREAIFAGRDNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0075419_101184232	3300006969	Populus Rhizosphere	MKFRLLVVAMMLLASCAPPWHPLGSYEPQSQRDHNRDLYECEREATFAGGDNKQQVFDSCMQAKGYTPSTDRFEWPHTQ*
Ga0075419_112566101	3300006969	Populus Rhizosphere	GLLVVSAIFLASCASQQPPGLSDTKSQRNYNRDLYECEREATFAGRDNKQQVFDNCMKARGYTPFSTDRPEWHHTQ*
Ga0075435_1005276673	3300007076	Populus Rhizosphere	CASQQPPGSSGTKSQGNYNRDMYECEREAIFAGRDNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0075435_1005626852	3300007076	Populus Rhizosphere	MKFRLLLVVAAMFLSSCASQQPSGLSDTKSQTNKDRDRDLYECEREATFASGDNKQQVFDNCMKARGYTPSSTDRPEWPHTQ*
Ga0099791_102592121	3300007255	Vadose Zone Soil	MKFRSLIVAAMFLAGCASQQPPGSSGTKSQGNYDRDLYECTRQATFADVGIQQQVFDNCMRARGYKYKEKSSSK*
Ga0099791_106544061	3300007255	Vadose Zone Soil	TFTIKDWRTYSASLAQGVKAAKIHSMKFRSLIVAAMFLASCASQQPPGLSDTKSQRNYNRDMYECEREAIFAGRNNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0066710_1026422432	3300009012	Grasslands Soil	RMKLRSLFVGAVFLASCASQQPPGLSDTKSQRNYNRDMYECEREAIFAGRNNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ
Ga0105098_104750771	3300009081	Freshwater Sediment	MRFRSLIVATMFLASCATWQPLGSYEPQSQRNYNRDLYECEREATFVGGDNKEQVFDNCMKARGYKQKS*
Ga0111539_103575341	3300009094	Populus Rhizosphere	MRFRLPVMAAMLLAGCARQQPPGLRGTNSQRNYNRDKCEREAIFAGRDNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0075418_101683581	3300009100	Populus Rhizosphere	MKFQLLFVGAVFLAGCASQKSPGSNGPKSQRNYDRDLYECEREATFSSAGIKQQFFDNCMKARGYKLKNPADR*
Ga0075418_116177122	3300009100	Populus Rhizosphere	VFLAGCASQQPSGSNASKSQRNYNRDLYECEREATFAGAGSKQQVFDNCMKARGYTLKNPADR*
Ga0075418_126170491	3300009100	Populus Rhizosphere	MKFRSLIVAAMFLAGCASQQPPGSSGTKSQGNYDRDLYECTRQATFADVGIQQQVFDNCMSARGYKEKSSSK*
Ga0114129_100724163	3300009147	Populus Rhizosphere	MKFRLLVVAMMLLASCAPPWHPLGSYEPQSQRDHNRDLYECEREATFAGGDNKQQVFDSCMKAKGYTPSTDRFEWPHTQ*
Ga0114129_101661663	3300009147	Populus Rhizosphere	MFLAGCASQQPPGSSGTNSQGNYNRDMYECEREAIFAGRDNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0114129_122129131	3300009147	Populus Rhizosphere	MANAVGLLVVSAIFLASCASQQPPGLSDTKSQRNYNRDLYECEREATFAGRDNKQQVFDNCMKARGYTPFSTDRPEWPHTQ*
Ga0105092_100428553	3300009157	Freshwater Sediment	MRFRSLIVATMFLASCATWQPLGSYEPQSQRNYNRDLYECEREATFAGGDNKEQVFDNCMKARGYKQKS*
Ga0105092_100643192	3300009157	Freshwater Sediment	MKFQSLFVGAVFLAGCVSQQPPGSSEPKSQRNYDRDSYECEREATFVGAGNKQQVFDNCMKARGYKLKNPADR*
Ga0105061_10814161	3300009807	Groundwater Sand	MKFQSLFVGTVFLAGCASQQPPGSNEPKSQRNYNRDLYECEREATFAGAGNKQQVSDNCMKARGYTLKNPADR*
Ga0105072_10928812	3300009818	Groundwater Sand	MKFQSLFVGTVFLAGCASQQPPGSNQPKSQRNYNRDLYECEREATFAGAGNKQQVFDNCMKARGYTLKNPADR*
Ga0126382_101102823	3300010047	Tropical Forest Soil	MQSMANSVSLLVVVVIFLSSCATWHPLGSYEPQSQRDYNRDLYECEREATVAGGDNKQQVFNSCMKARGYAPSSTDRFEWPHTQ*
Ga0126382_110182551	3300010047	Tropical Forest Soil	MLLASCATWQPLGSYEPQSQRDYNRDLYECEREATFAGVDNRQQVFDSCMKARGYTPSSIDRFEWPHTQ*
Ga0126382_124508171	3300010047	Tropical Forest Soil	MSGMTNAVALLAVAAVLLVGCATQHTPKATDATSPRNYNRDLYECERQATFADVGTKQQVFDNCMKARGYKEK*
Ga0126370_103602151	3300010358	Tropical Forest Soil	MKAQLLILVGLCLASCSPAQPLGTSEPKSDSAYNRDLTECEREAAFAGAGGKQQAFDNCMKARGTKQK*
Ga0126376_105450651	3300010359	Tropical Forest Soil	LLVVVVIFLSSCATWHPLGSYEPQSQRDYNRDLYECEREATVAGGDNKQQVFNSCMKARGYAPSSTDRFEWPHTQ*
Ga0126381_1017644201	3300010376	Tropical Forest Soil	PVIQQPPASQQPSGPSDTKNQGDNARFRDLYECEREAAFARGDNKQQVFNSCMKARGYAPSSTDRFEWPHTQ*
Ga0124850_10167886	3300010863	Tropical Forest Soil	MQSMANAVGLLVVAVMFLPSCATWQPLGSYEPQSQRDYNRDLYECERESALAGAGDKRKAFDSCMKARGYAPSSTDRFEWPHTQ*
Ga0137348_10304391	3300011398	Soil	MKFQSLFVGAVFLAGCASQQPPGSNEPKSQRNYNRDLYECEREATFAGVGNKQQVFDNCMKARGYKQK*
Ga0137349_10064011	3300012160	Soil	MKFQSLFVGAVFLSQQPPGSNEPKSPSNYDRDLYECAREATFAGAGNKQQVFDNCMKARGYTLKVPADR*
Ga0137362_104801942	3300012205	Vadose Zone Soil	MRFLLLMVAAFFASCASQQPPGSSDTKNQSDNDRFRDLYECEREATFASGDNKQQVFDKCMKARGYTPSSTDRPEWPHTQ*
Ga0137362_113169292	3300012205	Vadose Zone Soil	MKFRSLIVAVMFLAGCANQQPPGSNEPKSPSDYNRDLYECEREATFAGAGNKQEVFDNCMEARGYKRT*
Ga0137376_102082412	3300012208	Vadose Zone Soil	MQFRLLAVAAFLLVGCTSQQPQGSGQRNYNRDLYECERDATFAGRDNKQQVFDNCMKARGYTPLSTDRPEWPHTQ*
Ga0137377_100953111	3300012211	Vadose Zone Soil	MKFQSLFVGAVFLAGCASQQPLGSNEPKSQRNYNRDLYECEREATFAGAGNKQQVFDNCMKARGYKPKG*
Ga0137377_105943422	3300012211	Vadose Zone Soil	MKSRSLIVAAIFLASCASQQPPGSSDTKNPSHYNRDLYECQREATFAGRDNKQQVFDNCMKARGYREKG*
Ga0137372_1000439213	3300012350	Vadose Zone Soil	MKFQSLFVGAVFLAGCASQQPSGSNESKSQRNYNRDLYECEREATFAGAGNKQQVFDNCMKARGYTLKNPADR*
Ga0137371_110511621	3300012356	Vadose Zone Soil	MKFQSLFVGAVFLAGCASQQPSGSNESKSQRNYNRDLYECEREATFAGAGTKQQVFDNCMKARGYTLKNPADR*
Ga0137361_113825521	3300012362	Vadose Zone Soil	MKFRSLIVAVMFLAGCASQQPPGSNEPKSPSDYNRDLYECEREATFAGAGNKQEVFDDCMEARGYKRT*
Ga0137361_114112501	3300012362	Vadose Zone Soil	MRFLLLMVAAFFASCASQQPPGSSDTKNQSDNDRFRDLYECEREATFASGDNKQQVFDKCMRARGYTPSSTDRPEWPHTQ*
Ga0137358_107671791	3300012582	Vadose Zone Soil	MKFRSLIVAVMFLAGCASQQPPGSNEPKSPSNYNRDLYECEREATFAGAGNKQEVFDNCMEARGYKRT*
Ga0137397_100452192	3300012685	Vadose Zone Soil	MKFQSLFVGAVFLAGCASQQPPGSNEPKSQRNYNRDLYECEREATFAGAGSKQQVFDNCMKARGYEPKG*
Ga0137397_104676372	3300012685	Vadose Zone Soil	VGCTSQQPQGSGQRNYNRDLYECERDATFADRDNKQQVFDNCMKARGYAPLSTDRPEWPHTQ*
Ga0137394_100112518	3300012922	Vadose Zone Soil	MKFQSLFVGAVFLAGCASQQPPGSNEPKSQRNYNRDLYECEREATFAGAGNKQQVFDNCMKARGYKPKG*
Ga0137394_105164452	3300012922	Vadose Zone Soil	MSGMANAVGLLVVAAMFLAGCVSQQPPGSSQRNYNRDLYECEREATFAGRDNKQQVFDSCMKARGYTPFSTDRPEWPHTQ*
Ga0137404_102005602	3300012929	Vadose Zone Soil	MQFRILAVAAFLLVGCTSQQPQGSGQRNYNRDLYECERDATFAGRDNKQQVFDNCMKARGYTPLSTDRPEWPHTQ*
Ga0137404_105828113	3300012929	Vadose Zone Soil	MKLRSLFVGAVFLASCASQQPPGLSDTKSQRNYNRDMYECEREAIFAGRNNKQQVLDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0137407_100230775	3300012930	Vadose Zone Soil	MKLRSLFVGAVFLASCASQQPPGLSDTKSQRNYNRDMYECEHEAIFAGRNNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ*
Ga0153915_100513322	3300012931	Freshwater Wetlands	MKFRLLIVAVVFLASCAPWQPLGSSYEPKAASDYNRDLYECERGATLAGAGDKQRVFDDCMKARGYRQKEGGLKDNERPTR*
Ga0162653_1000841512	3300012937	Soil	MKFRSLIVAAMFLAGCASQQPPESSGTKSQGNYDRDLYECTRQATFADVGIQQQVFDNCMRARGYKEKSSSK*
Ga0126375_107663331	3300012948	Tropical Forest Soil	GMANAVRLLVVAVMFLSNCATWQPLGSYEPQSQRDYNRDLYECERESALAGAGDKRKAFDSCVKDRGYTPSSTDRFEWPHTQ*
Ga0126369_129207751	3300012971	Tropical Forest Soil	MKAQLLILVGICLASCSPAQPLGTSEPKSDSAYNRDLTECEREAAFAGAGGKQQAFDNCMKARGTKQK*
Ga0134077_105923702	3300012972	Grasslands Soil	MQFRLLAVTAFLLVGCTSQQPQGSGQRNYNRDLYECERDATFAGRDNKQQVFDNCMKARGYTPLSTDRPEWPHTQ*
Ga0164305_107395831	3300012989	Soil	AKIHSMKFRSLIVAAMFLAGCASQQPPGSSGTKSQGNYDRDLYECTRQATFADVGIQQQVFDNCMRARGYKEKSPSK*
Ga0137403_100332475	3300015264	Vadose Zone Soil	MKLRSLFVGAVFLASCASQQPPGSSDTKNPSNYNRDLYECQREATFAGRDNKQQVFDNCMKARGYREKG*
Ga0137403_101623133	3300015264	Vadose Zone Soil	MQFRILAVAAFLLVGCTSQQPQGSGQRNYNRDLYECERDATFADRDNKQQVFDNCMKAREYTPLSTDRPEWPHTQ*
Ga0182033_106727782	3300016319	Soil	MKLRSLIVAVMFLAGCASQQPPGSNEPKSPRDYNRDLYECEREATFAGAGSEQEVFDNCMEARGYKRT
Ga0182033_106970612	3300016319	Soil	MKLRSLIVVGVFLAGCATQQPSGPNEPKIQPDYNRDLYECTREAAFADIGTKQQVFDNCMKAKGYKPKAPNDR
Ga0182035_112146352	3300016341	Soil	MKLRSLIVAVMLLAGCASQQPPGSSEPKSPSNYNRDLDECEREATFAGAGSEQEVFDNCMEARGYKQT
Ga0182032_109649102	3300016357	Soil	MKLRSLIVAVMLLAGCASQQPPGSNEPKSPSDYNRDLDECEREATFAGAGSEQEVFDNCMEARGYKRT
Ga0184638_10106133	3300018052	Groundwater Sediment	MKFQSLFVGAVFLAGCASQQPPGSNEPKSPSNYNRDLYECAREATFAGVGNKQQVFDNCMKARGYALKVPTDR
Ga0184626_100070014	3300018053	Groundwater Sediment	MKFQSLFVGAVFLAGCASQQPPGSNEPKSQRNYNRDLYECEREATFAGVGNKQQVFDNCMKARGYKQK
Ga0184626_100641952	3300018053	Groundwater Sediment	MSGMANAVGLLVVAAMFLTGCASQQPPGSSQRNYNRDLYECEREATFAGRDNKQQVFDSCMKSRGYTPFSTDRPEWPHTQ
Ga0184626_100698171	3300018053	Groundwater Sediment	MKFQSLFVGAVFLAGCASQQPPGSNEPKSPSNYNRDLYECAREATFAGVGNKQQVFDNCMKARGYTLKVPTDR
Ga0184635_100192154	3300018072	Groundwater Sediment	MKFQSLFVGAVFLAACTSQQPPGSNEPKSPSNYDRDLYECAREATFAGAGNKQQVFDNCMKARGYTLKVPADR
Ga0184635_101404212	3300018072	Groundwater Sediment	MKFQSLFVGAVFLAGCASQQPPGSTEPKSPNNYNRDLYECAREATFAGVGNKQQVFDNCMKARGYALKVPTDR
Ga0184635_102551532	3300018072	Groundwater Sediment	MKFQSLFVGAVFLSQQPPGSNDTKNPSNYNRDLYECAREATFAGVGNKQQVFDNCMKARGYTLKVPTDR
Ga0184640_103864351	3300018074	Groundwater Sediment	MKFQSLFVGAVFLAGCASQQPPGSNEPKSQRNYNRDLYECEREATFAGRDNKQQVFDSCMKSRGYTPFSTDRPEWPHTQ
Ga0184625_100372641	3300018081	Groundwater Sediment	MKFQSLFVGAVFLAACASQQPPGSNEPKSPSNYDRDLYECAREATFAGAGNKQQVFDNCMKARGYTLKVPADR
Ga0187774_108913421	3300018089	Tropical Peatland	MANNALWRLKFQSLIVGVMFLAGCATWQPSGSYEPKNQGNYNRDLYECQREATFAANADNKQQV
Ga0066662_102808192	3300018468	Grasslands Soil	MKLRSLIVVAVFLAGCASQQPPGPNEPKIQPDYNRDLYECTREATFADIGTKQQVFDNCMKARGYKPKAPTDR
Ga0210384_101268004	3300021432	Soil	MKFQLLIAMGMFLASCAGGQLAGHSEPKSDSSYNRDLYECEREATFAGAGNKQQAFDNCMKARGYKQK
Ga0126371_112539162	3300021560	Tropical Forest Soil	MKAQLLILVGICLASCSPAQPLGTSEPKSDSAYNRDLTECEREAAFAGAGGKQQAFDNCMKARGTKQK
Ga0207684_108295921	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLRSLIVVAVLLAGCASQQPPGPNEPKIQPDYNRDLYECTREATFADIGTKQQVFDNCMKARGYK
Ga0209466_10009123	3300027646	Tropical Forest Soil	MQSMANSVSLLVVVVIFLSSCATWHPLGSYEPQSQRDYNRDLYECEREATFAGGDNKQQVFNSCMKARGYAPSSTDRFEWPHTQ
Ga0209819_100760003	3300027722	Freshwater Sediment	MRFRSLIVATMFLASCATWQPLGSYEPQSQRNYNRDLYECEREATFAGGDNKEQVFDNCMKARGYKQKS
Ga0209819_101835981	3300027722	Freshwater Sediment	MKFQSLFVGAVFLAGCVSQQPPGSSEPKSQRNYDRDSYECEREATFVGAGNKQQVFDNCMKARGYKLKNPADR
Ga0209814_100111702	3300027873	Populus Rhizosphere	MANAVGLLVVSAIFLASCASQQPPGLSDTKSQRNYNRDLYECEREATFAGRDNKQQVFDNCMKARGYTPFSTDRPEWHHTQ
Ga0299906_101146252	3300030606	Soil	MRFRLLIGAAVFLASCVSWQPLGSYEPQNGRNYNRDLYECEREATFAGAGNKQRVFDDCMRARGYKQKL
Ga0307469_114886621	3300031720	Hardwood Forest Soil	MKLRSLIVVAVLLAGCASQQPPGPNEPKIQPDYNRDLYECTREATFADIGTKQQVFDNCMKARGYKPKASTDR
Ga0307468_1000785611	3300031740	Hardwood Forest Soil	MRFRLPVIAAMLLASCASQQPPGLSDTKSQRNYNRDMYECEREAIFAGRDNKQQVFDSCMKTRGYIPSSTDR
Ga0307468_1000945541	3300031740	Hardwood Forest Soil	MKFQSLFVGAVFLAGCASQKSPGSNGPKSQRNYDRDLYECEREATFSSAGIKQQFFDNCMKARGYKLKNPADR
Ga0307475_113016281	3300031754	Hardwood Forest Soil	MKIEEATKARRMKFQLLIAMGMFLASCAGGQLAGHSEPKSDSSYNRDLYECEREATFAGAGNKQQAFDNCMKARGYKQK
Ga0307473_100375871	3300031820	Hardwood Forest Soil	FLAGCASQQPPGSSDTKSQGNYNRDKCEREAIFAGRDNKQQVFDSCMKTRGYIPSSTDRPEWPHTQ
Ga0307473_100564742	3300031820	Hardwood Forest Soil	MFLAGCASQQPPGSSGTNSQGNYNRDMYECEREAIFAGRDNKQQVFDSCMKTRGYILSSTDRPEWPHTQ
Ga0306921_105588382	3300031912	Soil	MTLRSLIVAVMLLAGCASQQPPGSNEPKSPHNYNRDLDECESEATFAGGGSEQEVFDNCMEARGYKRT
Ga0307470_103253273	3300032174	Hardwood Forest Soil	MKLRSLFVGAVFLASCASQQPPGLSDTKSQRNYNRDMYECEREAIFAGRDNKQQVFDSCMKTRGYIPSSTD
Ga0307471_1000343092	3300032180	Hardwood Forest Soil	MKFRSIIVAVMFLAGCASQQPPGSNEPKSPSNYNRDLYECEREAAFAGAGNKQQVFDNCMKARGDSPFSTDRPEWPHTQ
Ga0306920_1012040293	3300032261	Soil	MKLRSLIVVGVFLGGCATQQPSGPNEPKIQPDYNRDLYECTREAAFADIGTKQQVFDNCMKAKGYKPKAPNDR
Ga0335079_117347271	3300032783	Soil	MRDKPEKFAPARRTKFQLLIPVGICLAGCSAGQPLRSSEPKGDSTYNRDLTECEREAAFAGAGAKQQAFDNCMKARGVGRK
Ga0335080_107606111	3300032828	Soil	AMRDKPEKFAPARRTKFQLLIPVGICLAGCSAGQPLRSSEPKSDSTYNRDLTECEREAAFAGAGAKQQAFDNCMKARGVGRK
Ga0335070_111792182	3300032829	Soil	MKFRVLIVAALCLASCTPWQPLGSSYEPKSGSDYNRDLYECEREATLAGADNRQRVFDDCMKARGYKQK
Ga0326723_0228212_45_239	3300034090	Peat Soil	MKFRLLVAAMFLAGCGSQQPPGLSEPKSQGNYDRDLYKCTREATFADVGKKQQVFDNCMRARGY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049512

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences