Metagenome Family F049490

Basic Information
Family ID	F049490
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	44 residues
Representative Sequence	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNA
Number of Associated Samples	112
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.32 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.84 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Bacteria (79.452 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.452 % of family members)
Environment Ontology (ENVO)	Unclassified (45.205 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.110 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.86% β-sheet: 0.00% Coil/Unstructured: 57.14%
Feature Viewer

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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF01381	HTH_3	3.42
PF13560	HTH_31	2.05
PF01402	RHH_1	0.68
PF00343	Phosphorylase	0.68
PF16363	GDP_Man_Dehyd	0.68
PF09722	Xre_MbcA_ParS_C	0.68
PF03237	Terminase_6N	0.68
PF01370	Epimerase	0.68
PF13751	DDE_Tnp_1_6	0.68
PF07536	HWE_HK	0.68
PF04539	Sigma70_r3	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.68
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.68
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.68
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.68
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.45 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.45 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.45 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	76.03 %
Unclassified	root	N/A	20.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	72.60 %
Unclassified	root	N/A	20.55 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	35.62 %
Unclassified	root	N/A	20.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.44 %
Maricaulales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales	4.79 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.37 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	23.97 %
Unclassified	root	N/A	20.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.44 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	6.85 %
Maricaulaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae	4.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.37 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	22.60 %
Unclassified	root	N/A	20.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.44 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	6.85 %
Oceanicaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis	4.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.37 %
Spiribacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Spiribacter	0.68 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.44 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	11.64 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	6.16 %
unclassified Oceanicaulis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis	4.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.37 %
Spiribacter salinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Spiribacter → Spiribacter salinus	0.68 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.68 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.44 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	11.64 %
Methylobacterium sp. J-072	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	5.48 %
Oceanicaulis sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp.	4.79 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.37 %
Methylobacterium sp. E-005	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. E-005	0.68 %
Spiribacter salinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Spiribacter → Spiribacter salinus	0.68 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.68 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02P6DMY	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
2189573000\|GPBTN7E01DDXF0	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1061196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	534	Open in IMG/M
3300000955\|JGI1027J12803_101658307	All Organisms → cellular organisms → Bacteria → Proteobacteria	1895	Open in IMG/M
3300001661\|JGI12053J15887_10051998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Spiribacter → Spiribacter salinus	2288	Open in IMG/M
3300004152\|Ga0062386_101710913	Not Available	525	Open in IMG/M
3300004479\|Ga0062595_101603532	Not Available	607	Open in IMG/M
3300004479\|Ga0062595_101647596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300005165\|Ga0066869_10117303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300005332\|Ga0066388_105233623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. E-005	658	Open in IMG/M
3300005447\|Ga0066689_10625391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300005471\|Ga0070698_101953941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300005540\|Ga0066697_10345724	Not Available	867	Open in IMG/M
3300005547\|Ga0070693_101239640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300005553\|Ga0066695_10909774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300005574\|Ga0066694_10237982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	862	Open in IMG/M
3300005764\|Ga0066903_101737173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	1189	Open in IMG/M
3300005764\|Ga0066903_102378969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1024	Open in IMG/M
3300005764\|Ga0066903_103505600	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005764\|Ga0066903_104236201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300005764\|Ga0066903_108975124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300006804\|Ga0079221_11518189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	539	Open in IMG/M
3300006806\|Ga0079220_11142564	Not Available	636	Open in IMG/M
3300007258\|Ga0099793_10219887	Not Available	913	Open in IMG/M
3300009012\|Ga0066710_104777978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300009089\|Ga0099828_11962683	Not Available	513	Open in IMG/M
3300009101\|Ga0105247_11247071	Not Available	594	Open in IMG/M
3300009143\|Ga0099792_10333183	Not Available	911	Open in IMG/M
3300009147\|Ga0114129_12172093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	668	Open in IMG/M
3300009147\|Ga0114129_12193413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	665	Open in IMG/M
3300009637\|Ga0116118_1100249	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300010046\|Ga0126384_11112790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	725	Open in IMG/M
3300010046\|Ga0126384_12486524	Not Available	502	Open in IMG/M
3300010047\|Ga0126382_10201653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1416	Open in IMG/M
3300010047\|Ga0126382_10557727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	934	Open in IMG/M
3300010047\|Ga0126382_10754713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	823	Open in IMG/M
3300010047\|Ga0126382_12540703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	500	Open in IMG/M
3300010048\|Ga0126373_10547260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1205	Open in IMG/M
3300010335\|Ga0134063_10249753	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300010339\|Ga0074046_10768758	Not Available	564	Open in IMG/M
3300010360\|Ga0126372_11362238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300010361\|Ga0126378_10598195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1217	Open in IMG/M
3300010362\|Ga0126377_12572477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300010366\|Ga0126379_13828140	Not Available	504	Open in IMG/M
3300010373\|Ga0134128_12067311	Not Available	627	Open in IMG/M
3300010397\|Ga0134124_11815790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp.	644	Open in IMG/M
3300010398\|Ga0126383_10128606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2324	Open in IMG/M
3300010868\|Ga0124844_1222473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300011271\|Ga0137393_10079930	Not Available	2628	Open in IMG/M
3300012202\|Ga0137363_11682649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	527	Open in IMG/M
3300012205\|Ga0137362_11672910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	523	Open in IMG/M
3300012210\|Ga0137378_11313463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300012211\|Ga0137377_11104837	Not Available	723	Open in IMG/M
3300012211\|Ga0137377_11674793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300012356\|Ga0137371_10120598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2048	Open in IMG/M
3300012359\|Ga0137385_11511076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp.	535	Open in IMG/M
3300012362\|Ga0137361_11314259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp.	647	Open in IMG/M
3300012927\|Ga0137416_11334308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300012957\|Ga0164303_10762165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300012957\|Ga0164303_10987660	Not Available	598	Open in IMG/M
3300012961\|Ga0164302_11008627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300012986\|Ga0164304_10882443	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300012989\|Ga0164305_12096703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300013297\|Ga0157378_12802563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300013307\|Ga0157372_13141368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300014326\|Ga0157380_12823259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp.	552	Open in IMG/M
3300015371\|Ga0132258_11008145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2104	Open in IMG/M
3300015372\|Ga0132256_102932896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	573	Open in IMG/M
3300015374\|Ga0132255_100209486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2761	Open in IMG/M
3300016319\|Ga0182033_10872191	Not Available	796	Open in IMG/M
3300016319\|Ga0182033_11448342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	619	Open in IMG/M
3300016319\|Ga0182033_12151175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300016341\|Ga0182035_11029656	Not Available	731	Open in IMG/M
3300016341\|Ga0182035_11063117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	719	Open in IMG/M
3300016357\|Ga0182032_11357242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300016357\|Ga0182032_11394181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp.	607	Open in IMG/M
3300016371\|Ga0182034_11137795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300016371\|Ga0182034_11492577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	592	Open in IMG/M
3300016404\|Ga0182037_10113842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1973	Open in IMG/M
3300016404\|Ga0182037_11658048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	569	Open in IMG/M
3300016422\|Ga0182039_11314699	Not Available	655	Open in IMG/M
3300020579\|Ga0210407_10250489	Not Available	1380	Open in IMG/M
3300021168\|Ga0210406_11118727	Not Available	578	Open in IMG/M
3300021361\|Ga0213872_10289010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300021404\|Ga0210389_11410752	Not Available	531	Open in IMG/M
3300025898\|Ga0207692_10636088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	688	Open in IMG/M
3300026332\|Ga0209803_1261366	Not Available	595	Open in IMG/M
3300026551\|Ga0209648_10454418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	792	Open in IMG/M
3300027603\|Ga0209331_1159702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	531	Open in IMG/M
3300027654\|Ga0209799_1101960	Not Available	651	Open in IMG/M
3300027874\|Ga0209465_10231137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	924	Open in IMG/M
3300028819\|Ga0307296_10634138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
3300031543\|Ga0318516_10354870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	846	Open in IMG/M
3300031549\|Ga0318571_10197469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	718	Open in IMG/M
3300031668\|Ga0318542_10310012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300031680\|Ga0318574_10332468	Not Available	885	Open in IMG/M
3300031680\|Ga0318574_10711819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	589	Open in IMG/M
3300031682\|Ga0318560_10477608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300031719\|Ga0306917_10206797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1488	Open in IMG/M
3300031723\|Ga0318493_10680818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	576	Open in IMG/M
3300031744\|Ga0306918_10232239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1402	Open in IMG/M
3300031744\|Ga0306918_11052095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300031747\|Ga0318502_10185355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1200	Open in IMG/M
3300031747\|Ga0318502_10337987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp.	890	Open in IMG/M
3300031763\|Ga0318537_10258460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300031768\|Ga0318509_10309080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	885	Open in IMG/M
3300031768\|Ga0318509_10440663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300031777\|Ga0318543_10236976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	813	Open in IMG/M
3300031782\|Ga0318552_10421299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300031821\|Ga0318567_10288225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	925	Open in IMG/M
3300031833\|Ga0310917_10763502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	653	Open in IMG/M
3300031835\|Ga0318517_10337545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	681	Open in IMG/M
3300031835\|Ga0318517_10554421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300031845\|Ga0318511_10491859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	567	Open in IMG/M
3300031890\|Ga0306925_11171308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300031912\|Ga0306921_12007714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	616	Open in IMG/M
3300031912\|Ga0306921_12779694	Not Available	501	Open in IMG/M
3300031941\|Ga0310912_10973768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	651	Open in IMG/M
3300031942\|Ga0310916_11285767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300031942\|Ga0310916_11399823	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300031945\|Ga0310913_10401830	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300031945\|Ga0310913_10515680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Maricaulales → Maricaulaceae → Oceanicaulis → unclassified Oceanicaulis → Oceanicaulis sp.	849	Open in IMG/M
3300031945\|Ga0310913_11017615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	580	Open in IMG/M
3300031946\|Ga0310910_10376912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300031947\|Ga0310909_10086274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2498	Open in IMG/M
3300031947\|Ga0310909_10792691	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031954\|Ga0306926_10193025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2527	Open in IMG/M
3300031954\|Ga0306926_11371739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300031954\|Ga0306926_11952781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	661	Open in IMG/M
3300031981\|Ga0318531_10024819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2421	Open in IMG/M
3300032001\|Ga0306922_11594635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300032025\|Ga0318507_10386220	Not Available	610	Open in IMG/M
3300032025\|Ga0318507_10504055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300032035\|Ga0310911_10195298	Not Available	1150	Open in IMG/M
3300032039\|Ga0318559_10599707	Not Available	514	Open in IMG/M
3300032041\|Ga0318549_10563344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	512	Open in IMG/M
3300032051\|Ga0318532_10120625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	928	Open in IMG/M
3300032063\|Ga0318504_10152960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1063	Open in IMG/M
3300032076\|Ga0306924_11325235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	772	Open in IMG/M
3300032076\|Ga0306924_11772633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300032090\|Ga0318518_10455171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	656	Open in IMG/M
3300032094\|Ga0318540_10592518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. J-072	534	Open in IMG/M
3300032261\|Ga0306920_102151158	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300032261\|Ga0306920_103237929	Not Available	609	Open in IMG/M
3300033289\|Ga0310914_10376308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1284	Open in IMG/M
3300033289\|Ga0310914_10657803	Not Available	942	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.15%
Host-Associated	Host-Associated	6.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.78%
Plants	Host-Associated → Plants	6.85%
Aquatic	Environmental → Aquatic	1.37%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.48%
Freshwater	Environmental → Aquatic → Freshwater	1.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.51%
Loam	Environmental → Terrestrial → Soil → Loam	9.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.37%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.37%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049490

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02204570	2070309004	Green-Waste Compost	MAQATGITAIRQLMSRGRPPKSTSPLRLAHTEFVATLAGNAPHPI
N55_08906060	2189573000	Grass Soil	MTQAAAITTAIRELMSPGRPPKSTSPVRAAHTEFVAALAANVPRPLH
AP72_2010_repI_A100DRAFT_10611962	3300000837	Forest Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHIEFVA
JGI1027J12803_1016583074	3300000955	Soil	MAQAESITTAIPELMSRGRPPKATSPVRQAHTEFI
JGI12053J15887_100519981	3300001661	Forest Soil	MAQAERITTAIRELMSRGRPLKSTSPVRAAHTEFVAALAANAPRPLHSEANS
Ga0062386_1017109132	3300004152	Bog Forest Soil	MAQAERITTAVRELMSRGEPPKSASPRAAHTELVAAIAGNPPP
Ga0062595_1016035323	3300004479	Soil	MAQAAGITRAIRQLMSRGRPPQSTTPVRQAHTEFIAALAGNVPHPI
Ga0062595_1016475962	3300004479	Soil	MAQAESITTAIRQLMSRGRPPKSTSPVRQAHTEFIAALAGNVPHPIYAGANA
Ga0066869_101173032	3300005165	Soil	MAQAKDVSTTIRELMSRGQPPKSTNPVRRAHTELVAALAGNVPHAIYADV
Ga0066388_1052336231	3300005332	Tropical Forest Soil	MAQAETISTAIRELMSRREPPKSTIRVGAAHVELVAALAGNQPIPIHVQVD
Ga0066689_106253912	3300005447	Soil	MAQAECIITAIRELMSRGLPAQSTSSVRLAYIEFVAALAGNVPRPIYADVDSEDL
Ga0070698_1019539412	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAQAECSTTAIRELMSRGQPPNSTSPARLAHTELVAALAGNIPHPIYADVDSE
Ga0066697_103457241	3300005540	Soil	MAQAECIITAIRELMSRGRPSKSMCPVRAAHTEFVAALAGN
Ga0070693_1012396402	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTENITTAIRQLMSRGRTAKSTSPVRKAHTEFVAALAGNVPHP
Ga0066695_109097741	3300005553	Soil	MARAECITTAVRELLSRGRQAKSTSPVRLAHIEFVAALAGNVPHPIYAD
Ga0066694_102379821	3300005574	Soil	MAQADCMTTAIRELMSHQSSPNAMSPVRAAHAEFVSALAANPPHPIHP
Ga0066903_1017371731	3300005764	Tropical Forest Soil	MAQAECFTTAIRELMSRGRPPKSKNPVHLAHTELVAALAGNIPDPI
Ga0066903_1023789691	3300005764	Tropical Forest Soil	MAQADCITTAIRQLMSRGRPPKSTSPVRLAHTEFIAALAGNVPHPIYAD
Ga0066903_1035056004	3300005764	Tropical Forest Soil	MAQATGITTAIRQLMSRGRPPKSTSPVRLAHTEFVAALAGNIP
Ga0066903_1042362013	3300005764	Tropical Forest Soil	MAQAECITTAIRELMSRGRRPKSRSPVRLAHTEFVAALAGNAPHPIYADVDSED
Ga0066903_1089751241	3300005764	Tropical Forest Soil	MAQAECITTAIRELMSRGRPPKSTSPVRLAHTEFVAAL
Ga0079221_115181891	3300006804	Agricultural Soil	MAQAESITTAIRQLMSRGRPQKSTSPVPQAHTECIAVLAGNVPRPIYA
Ga0079220_111425641	3300006806	Agricultural Soil	MAQAAGISTAIRQLVSRGRLRKSTSTVRLAHTELIAA
Ga0099793_102198872	3300007258	Vadose Zone Soil	MAQAECIITAIRELMSRGRPPNSTSPARLAHSEFVAALAANVP
Ga0066710_1047779781	3300009012	Grasslands Soil	MAQAEHITTAIRELMSRGRTPKSTSSVRLAHIELVAALAGNVPYPIYADVDSEDLD
Ga0099828_119626831	3300009089	Vadose Zone Soil	MAQAECITTAIRELMSRGRPPSSTSPARLAHTEFVAALAANVPHP
Ga0105247_112470712	3300009101	Switchgrass Rhizosphere	MAQAERIATAIRELMSRGRPPKSTTPVRQAHTECIAALAGNIPH
Ga0099792_103331832	3300009143	Vadose Zone Soil	MAQAECIITAIRELMSRGRPPNSTSPARLAHSEFVA
Ga0114129_121720931	3300009147	Populus Rhizosphere	MAQAECITTPIRELMSRGRPPKSTSPVRLAHAEFVAALAGNVPHPIYADVDSEDLDG
Ga0114129_121934132	3300009147	Populus Rhizosphere	MAQAECISTAVRELMSRGRPPKSTSPVRLAHTEFVAALAGNI
Ga0116118_11002492	3300009637	Peatland	MAQADCVTTAIRALLTGASAKSSTNPVQAAYAEFVAALA
Ga0126384_111127901	3300010046	Tropical Forest Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHTEFV
Ga0126384_124865241	3300010046	Tropical Forest Soil	MAQAERITTAIRELMSRGRPSKSTNRVRAAHSGLIVA
Ga0126382_102016531	3300010047	Tropical Forest Soil	MAQAECITTAIRELMSCGRPPKSTSPVRPAHIEFVAALAGNIPHPIYADV
Ga0126382_105577271	3300010047	Tropical Forest Soil	MAHAESITTAIRELMSRGRPRKSTSPVRRAHTELVAALAGNVPHAIYAAV
Ga0126382_107547131	3300010047	Tropical Forest Soil	MAQAECITTAIRELMSHGRPPKSTSPVRLAHSEFVAALAGNV
Ga0126382_125407031	3300010047	Tropical Forest Soil	MAQAECITTAIRELMSRGPLKSTNPVRLAHTEFVAVLAGNVPHLIY
Ga0126373_105472603	3300010048	Tropical Forest Soil	MAQAECITTAIRELMSCGRPRKSTSPVRLAHIEFVAALAGNIP
Ga0134063_102497532	3300010335	Grasslands Soil	MARAECITTAVRELLSRGRQAKSTSPVRLAHTEFVAA
Ga0074046_107687581	3300010339	Bog Forest Soil	MAQAERITTAVRELMSRGEPPKSASPRAAHTEVVAAIAGNPPPP
Ga0126372_113622382	3300010360	Tropical Forest Soil	MAQAECICTAIGELMSRRRPPKCTDSVRLAHIELVAALAGNVP
Ga0126378_105981951	3300010361	Tropical Forest Soil	MAQAECITTAIRELMSCGRPPKSTSPVRLAHIEFVAALGG
Ga0126377_125724771	3300010362	Tropical Forest Soil	MAQAECITTAIHELVSRGRQPKSTSPVRLAHIEFVAALAENVPHPIYA
Ga0126379_138281402	3300010366	Tropical Forest Soil	MAQAECITTAIRELMSRGRPPKSTSPVRLAHTEFIAAL
Ga0134128_120673111	3300010373	Terrestrial Soil	MAQAQSITTAIRQSMSRGRPPKSTSPVRQAHTELIAALAGNVPHPIYAGADADDL
Ga0134124_118157901	3300010397	Terrestrial Soil	MAQAERIATAIRGLMSRGRPPKSTSPVRAAHAEFIAALAGNIPHPIYA
Ga0126383_101286061	3300010398	Tropical Forest Soil	MAQAKCITTAIRELMSCARPPKSTSPVRLAHIEFVAALGGNIPHAIYADVDS
Ga0124844_12224732	3300010868	Tropical Forest Soil	MAQAECITTAIRELMSRGRPAKSTSPVRLAHIEFVAALAGNIPHPIYA
Ga0137393_100799304	3300011271	Vadose Zone Soil	MAQAECIITAIRELMSRGRPPNSTSPARLAHSEFVAAL
Ga0137363_116826491	3300012202	Vadose Zone Soil	MAQAERINTAIRELMSRGRPSKSTNPVRAAHSGLIAGLPANVPHLIH
Ga0137362_116729101	3300012205	Vadose Zone Soil	MAGAERITTAIRELMSRGRPLKSTNLVRAAHTEFIVALAGNAPR
Ga0137378_113134631	3300012210	Vadose Zone Soil	MAQAGCITTAIRELMSRGRPPKSTSPVRLAHMELVAALVGNVPHPIYA
Ga0137377_111048371	3300012211	Vadose Zone Soil	MAQAECITTAIRELMSRGRPPKPSNPVRLAHTEFVA
Ga0137377_116747931	3300012211	Vadose Zone Soil	MARAECITTAVRELLSRGRQAKSTSPVRLAHIEFVAALAGNVPHPIYADIDSEDL
Ga0137371_101205981	3300012356	Vadose Zone Soil	MAQAECIATAIRELMSRGRPPKSTSPVRLAHTEFVAALAGNVPHPIYADVDSED
Ga0137385_115110762	3300012359	Vadose Zone Soil	MARAECITTAVRELLSRGRQAKSTSPVRLAHIEFVAALAGNVPHP
Ga0137361_113142592	3300012362	Vadose Zone Soil	MEVTMAQAECITTAIRELMSRGQPPNSTSPVRLAHTEFVAALAGNAPQPI
Ga0137416_113343081	3300012927	Vadose Zone Soil	MAQAESIITAIRELMSRGWPSKSTSPVRLAHTEFVVALAGNVPHPI
Ga0164303_107621652	3300012957	Soil	MAQAAGITTAIRQLMSRRRTPKSTSPVRLAHIDLVAALAGNLPGRI
Ga0164303_109876602	3300012957	Soil	MAQAAGITTAIRQLMPRRRTPKSTSPVRLAHIELI
Ga0164302_110086271	3300012961	Soil	MAQAKVVSTTIRELMSRGQPPKSTSPVRRAHTELVAA
Ga0164304_108824433	3300012986	Soil	MAQADSITTAIRQLMSRGQPPNSTSPVRAAHIEFVATLSGN
Ga0164305_120967031	3300012989	Soil	MAQAECITTATRELMSRGRPPKSTNPVRLAHTEFVTALAGTAPDPIY
Ga0157378_128025632	3300013297	Miscanthus Rhizosphere	MAQAKYVSTTIRELMSRGHPPKSTSPVRRAHTELVAAL
Ga0157372_131413681	3300013307	Corn Rhizosphere	MAQAKGVSTTIRELMSRGQPPKSTSPVRRAHTELVAALAGNVPH
Ga0157380_128232591	3300014326	Switchgrass Rhizosphere	MAQAKGVSTTIRELMSRGQPPKSTSPVRRAHTELVAALAGNVPHAIYADVDSE
Ga0132258_110081451	3300015371	Arabidopsis Rhizosphere	MAQAERIIKASRELMSRVRRPKSTSPLRLAHSELIAALAGNIPHPIYEGATADDLDDRAE
Ga0132256_1029328963	3300015372	Arabidopsis Rhizosphere	MAQAERIIKASRELMSRVRRPKSTSPLRLAHSELIAAL
Ga0132255_1002094866	3300015374	Arabidopsis Rhizosphere	MAQAESITTAIRQLMSRARPPKSTSPVRQAYTELIAALAGNAPHPIYAGANADDLDRRA
Ga0182033_108721911	3300016319	Soil	MAQAEHITTAIRELMSRGQPLKSTNGVRAAHTEFVAALAGNAPHPIRSGI
Ga0182033_114483422	3300016319	Soil	MAQAEGITTAIRELMSRGRLAKSTNPVRLAHIEFVAARWECS
Ga0182033_121511751	3300016319	Soil	MAQAENITTAIREPTSRGQRPKSTSPVRAAHTEFIAALT
Ga0182035_110296562	3300016341	Soil	MAQAERISMAIRELMSRGRPVNSTNPVRAAYTEFIAALAGNVPSPIHRDANWDSLEHHLRRVF
Ga0182035_110631171	3300016341	Soil	MAQAECITTAIRELMSCGRPPKSTSPVRPAHIEFVAAL
Ga0182032_113572422	3300016357	Soil	MAQAKCISTAIRELMSRGRPPKSTSPVRLAHTEFVAALAGNVP
Ga0182032_113941811	3300016357	Soil	MAQAECIITAIRELMSRGRPPKSTSSVHAAHTELVAAIAGNPP
Ga0182034_111377951	3300016371	Soil	MAQAESITTAIRELMSRGQPLKSTNRVRAAHTEFVAALAGNVPHPIR
Ga0182034_114925771	3300016371	Soil	MAQAECNSTAVRELMSRGRPPKSTSPVRLAHTEFVAA
Ga0182037_101138424	3300016404	Soil	MAQAECITTAIRGLMSCGGPPKSTSPVRLAHIEFVAALAGNIPHPIY
Ga0182037_116580482	3300016404	Soil	MAQAECITTAIRELMSRGRPPKSTNPVGLAHTEFVAALAGN
Ga0182039_113146991	3300016422	Soil	MAQAECIITAIRELMSRGRPPKSPSSVHAAHTELVATLA
Ga0210407_102504891	3300020579	Soil	MAQAERITTAIRELMSRGRPPTSTNPVRAAHTEFLAALAGN
Ga0210406_111187271	3300021168	Soil	MAQADSITTAIRQLMSRGQPPNSTSPVRAAHIEFVATLSGNVPH
Ga0213872_102890102	3300021361	Rhizosphere	MAQAECITTAIRELMSRGRPPKSTNPVRLAHTEFVT
Ga0210389_114107523	3300021404	Soil	MAQAERITTAIRELMSRGRPPTSTNPVRAAHTEFLAAL
Ga0207692_106360881	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAQAERIATAIRELMSRGRPPKSTTPVRQAHTECIAA
Ga0209803_12613661	3300026332	Soil	MAQAECIITAIRELMSRGLPAQSTSSVRLAYIEFVAALAGNV
Ga0209648_104544181	3300026551	Grasslands Soil	MAQAECITTAIRELMSRGRPPNSTSPARLAHTELVAALAWNIPHPIYADLDSE
Ga0209331_11597021	3300027603	Forest Soil	MAQAECITTAIRQLMSRGRPPKSTSPVWAAHIEFVA
Ga0209799_11019601	3300027654	Tropical Forest Soil	MAQAECITTAIRELMSRGRPPKSTSPVRLAHTELVAAL
Ga0209465_102311371	3300027874	Tropical Forest Soil	MAQAECITTAIRERMSCGGPPKSTSPVRLAHIEFVAA
Ga0307296_106341382	3300028819	Soil	MARADCMTTAIRELMSRQSAPNSMNPVRAAHAEFAGALAGNPPHSIQPDL
Ga0318516_103548701	3300031543	Soil	MAQAESITTAIRKLMSRGRPPKSTSPVRLAHTEFVAALAGNP
Ga0318571_101974691	3300031549	Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHTEFVATLAGNAPDPIYAD
Ga0318542_103100121	3300031668	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRPAHIEFVAALTGNIPH
Ga0318574_103324681	3300031680	Soil	MAQAECIITVIRELMSRGRPPQSANPVRLAHTEFVAALAGNV
Ga0318574_107118193	3300031680	Soil	MAQAECITTAIRELMSCGRPPKSTSPVRLAHIEFVAALAGNIPHAIYAD
Ga0318560_104776082	3300031682	Soil	MAQAKCITTAIRELMSRGRPPKSTNPVRLAHIELVAALAG
Ga0306917_102067973	3300031719	Soil	MAQAECITTAIRELMSRGWPPKSTNPVRLAHIEFVAALAGNVPHP
Ga0318493_106808182	3300031723	Soil	MAQAECITTAIRELMSCGRPPKSTNPVRPAHIEFVAALAGNI
Ga0306918_102322391	3300031744	Soil	MAQAECITTAIRKLMSRGRPPKSTNPVRLAQTEFVTAL
Ga0306918_110520953	3300031744	Soil	MAQAESITTAIRRLMSREAPKKFTCLVRAAHTELVAALASNP
Ga0318502_101853551	3300031747	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNAPD
Ga0318502_103379872	3300031747	Soil	MAQAESINTAIRELLSRGRPLQSTIRVRAANTEFVAALAENAPC
Ga0318537_102584602	3300031763	Soil	MAQAECITTAIRELMSRGRPPKSTNPVQLAHIELVAALAENV
Ga0318509_103090802	3300031768	Soil	MAQAECITTAIRELMSRGWPPKSTNPVRLAHIEFVAALAGNVPHPIYT
Ga0318509_104406631	3300031768	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNAPHPIYADVDSDDLEG
Ga0318543_102369761	3300031777	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFVAALAGNIPH
Ga0318552_104212991	3300031782	Soil	MAQAERITTAIRELMSRGRPPKSPSPVRLAHIEFVAALAGNVPHPI
Ga0318567_102882251	3300031821	Soil	MAQAECITTAIRELMSCGRPPKSTNPVRPAHIEFVAALAG
Ga0310917_107635022	3300031833	Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHIELVAAL
Ga0318517_103375452	3300031835	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNA
Ga0318517_105544211	3300031835	Soil	MAQAGRITTAIRELMSRGRPPKSPSPVRLAHIEFVAALAGNVPHPIHADV
Ga0318511_104918591	3300031845	Soil	MAQAECITTAIRELMSCGRPPKSTSPVRPAHIEFVSALAGN
Ga0306925_111713081	3300031890	Soil	MAQAECITTAIRELMSRGWPPKSTNPVRLAHIEFVAA
Ga0306921_120077141	3300031912	Soil	MAQADSITTAIRQLMSRGQPPKSTNPVRGAHAEFVAALAGNAP
Ga0306921_127796942	3300031912	Soil	MAQAEHITTAIRELMSRGRPVNSTNLVRAAHTEFV
Ga0310912_109737682	3300031941	Soil	MAQAECITTAIRELMSRGRPPKSTNPVQLAHIELVAAL
Ga0310916_112857672	3300031942	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRLAHIEFVAALAGNVPHPIYPDVDSED
Ga0310916_113998232	3300031942	Soil	MAQADSITTAIRELMSRGQPPKSTNPVRAAHAEFVAALAGNAPHRIH
Ga0310913_104018301	3300031945	Soil	MAQAECITTAIRELMSRGRPPESTVRLAHTEFVAALAGNVPQTICA
Ga0310913_105156802	3300031945	Soil	MAQAESISTAIRELLSRGRPLQSTNRVRAAHTEFIAAL
Ga0310913_110176151	3300031945	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFVAALAGNIPQPIYADVDS
Ga0310910_103769123	3300031946	Soil	MAQAEYITTAIRELMSRGEPPKSTSPVRLAHTEFVAVLAGNVPHPIYADVDSED
Ga0310909_100862744	3300031947	Soil	MAQAECITTAIRELMSRGRPAKSTSPVRLAHIEFV
Ga0310909_107926913	3300031947	Soil	MAQAERITTAIRELMSRGGPLKSKNPVRVAQAEFVAALAGNAPHPVRSD
Ga0306926_101930254	3300031954	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFVAALAGNIPHPIYAD
Ga0306926_113717391	3300031954	Soil	MAQADSITTAIRELMSRGRPLKSTNPLRVAHSEFVAALAG
Ga0306926_119527812	3300031954	Soil	MAQADSITTAIRELMSRGQPPKSTNPVRAAHAEYVA
Ga0318531_100248191	3300031981	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFVAALAGNIPHPI
Ga0306922_115946352	3300032001	Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHTEFVTALAGNI
Ga0318507_103862201	3300032025	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALA
Ga0318507_105040552	3300032025	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRPAHIEFVAALTGNIPHPIYADVDSEDLDG
Ga0310911_101952981	3300032035	Soil	MAQTNYITTAIRELMSPGRPPKSTSPVRLAHIEFIAALAGNVPYPIYANV
Ga0318559_105997072	3300032039	Soil	MAQAEYITTAIRELMSRARPPKSTSPVRRAHTEFVAALAGNAPDPIYADVDSE
Ga0318549_105633441	3300032041	Soil	MAQADSITTAIRELMSRGQPPKSTNPMRAAHAEFLA
Ga0318532_101206252	3300032051	Soil	MAQAECITTAIRELMSCGGPPKSTSPVRLAHIEFV
Ga0318504_101529602	3300032063	Soil	MAQAECITTAIRELMSRGRPPKSTSPVRRAHTEFVAALAGNAPDPIHADV
Ga0306924_113252351	3300032076	Soil	MARAECITTAIRELMSRGRPPKSTNPVRLAHTEFVAAI
Ga0306924_117726332	3300032076	Soil	MAQAECITTAIRELMSRGQPLKSTNPVWLAHIEFVAALAGNVPHPTYADV
Ga0318518_104551711	3300032090	Soil	MAQAECITTAIRELMSRGRPPKSTNPVRLAHIELVAALAENV
Ga0318540_105925181	3300032094	Soil	MAQAESITTAIRKLMSRGRPPKSTSPVRLAHTEFVAALAGNPPHPIRSNAY
Ga0306920_1021511581	3300032261	Soil	MAQAEHITTAIRELMSRGRPVNSTNLVRAAHTEFVAALAGNAPHPIRSDAN
Ga0306920_1032379291	3300032261	Soil	MAQAEHITTAIRELMSRGLPLKSTNRVRAAHTEFVAALAGNAPHPIRSSANWEAL
Ga0310914_103763083	3300033289	Soil	MAQAECITTAIRELMSCGRPPKSTNPVRPAHIEFVA
Ga0310914_106578034	3300033289	Soil	MAQAESITTAIRELMSRGQAAKSTNKVRAAHRNFIAAVAASA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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