NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049440

Metagenome / Metatranscriptome Family F049440

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049440
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 43 residues
Representative Sequence VPGTDDPSTPPSSTDSTVDEDRLPRSHRCRSQRLDGFYDREPAARC
Number of Associated Samples 92
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 97.95 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 82.88 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (84.932 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment
(32.877 % of family members)
Environment Ontology (ENVO) Unclassified
(30.137 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(32.877 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.13
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A84.93 %
All OrganismsrootAll Organisms15.07 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006939|Ga0081244_1525471Not Available1439Open in IMG/M
3300007219|Ga0075025_1330719Not Available924Open in IMG/M
3300007219|Ga0075025_1340115Not Available525Open in IMG/M
3300009580|Ga0115596_1114816Not Available579Open in IMG/M
3300009586|Ga0115591_1122441Not Available581Open in IMG/M
3300010082|Ga0127469_193900Not Available1018Open in IMG/M
3300010085|Ga0127445_1063921Not Available2272Open in IMG/M
3300010090|Ga0127471_1095981Not Available1195Open in IMG/M
3300010103|Ga0127500_1011511All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20615Open in IMG/M
3300010116|Ga0127466_1117127Not Available2262Open in IMG/M
3300010117|Ga0127449_1106458Not Available605Open in IMG/M
3300010120|Ga0127451_1066414Not Available2277Open in IMG/M
3300010138|Ga0115595_1031015Not Available2318Open in IMG/M
3300010139|Ga0127464_1128033Not Available2270Open in IMG/M
3300010144|Ga0115593_1259006Not Available564Open in IMG/M
3300010147|Ga0126319_1628573Not Available517Open in IMG/M
3300010154|Ga0127503_10233587Not Available1719Open in IMG/M
3300010154|Ga0127503_10554981Not Available922Open in IMG/M
3300010154|Ga0127503_10726791Not Available510Open in IMG/M
3300010861|Ga0126349_1007920Not Available502Open in IMG/M
3300010861|Ga0126349_1065710Not Available2297Open in IMG/M
3300012212|Ga0150985_120023141All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-202178Open in IMG/M
3300012374|Ga0134039_1203840Not Available502Open in IMG/M
3300012405|Ga0134041_1363357Not Available696Open in IMG/M
3300012469|Ga0150984_100012680Not Available634Open in IMG/M
3300012469|Ga0150984_119415595All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-202320Open in IMG/M
3300019208|Ga0180110_1015330All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-201760Open in IMG/M
3300019208|Ga0180110_1195313Not Available2318Open in IMG/M
3300019212|Ga0180106_1070652Not Available2350Open in IMG/M
3300019212|Ga0180106_1128684All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-202297Open in IMG/M
3300019212|Ga0180106_1276834Not Available500Open in IMG/M
3300019212|Ga0180106_1300660Not Available647Open in IMG/M
3300019228|Ga0180119_1194177Not Available1421Open in IMG/M
3300019228|Ga0180119_1207042Not Available525Open in IMG/M
3300019229|Ga0180116_1076104Not Available900Open in IMG/M
3300019229|Ga0180116_1082901Not Available575Open in IMG/M
3300019229|Ga0180116_1093351All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20945Open in IMG/M
3300019229|Ga0180116_1123147Not Available722Open in IMG/M
3300019232|Ga0180114_1087274All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20612Open in IMG/M
3300019233|Ga0184645_1048388Not Available506Open in IMG/M
3300019233|Ga0184645_1307068Not Available990Open in IMG/M
3300019233|Ga0184645_1349867All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-201577Open in IMG/M
3300019238|Ga0180112_1131593Not Available2166Open in IMG/M
3300019241|Ga0187793_1019595All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-201176Open in IMG/M
3300019241|Ga0187793_1031182Not Available2304Open in IMG/M
3300019248|Ga0180117_1169207Not Available905Open in IMG/M
3300019248|Ga0180117_1173366Not Available536Open in IMG/M
3300019248|Ga0180117_1191206Not Available1235Open in IMG/M
3300019249|Ga0184648_1295401Not Available1179Open in IMG/M
3300019249|Ga0184648_1310087All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20939Open in IMG/M
3300019249|Ga0184648_1519492Not Available614Open in IMG/M
3300019254|Ga0184641_1251520All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20867Open in IMG/M
3300019255|Ga0184643_1132449Not Available2265Open in IMG/M
3300019255|Ga0184643_1203635Not Available1712Open in IMG/M
3300019257|Ga0180115_1006737All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-201710Open in IMG/M
3300019259|Ga0184646_1220160Not Available689Open in IMG/M
3300019263|Ga0184647_1130129Not Available1042Open in IMG/M
3300019269|Ga0184644_1066896Not Available648Open in IMG/M
3300019279|Ga0184642_1169699Not Available2021Open in IMG/M
3300019279|Ga0184642_1533414Not Available1377Open in IMG/M
3300020063|Ga0180118_1070762All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20537Open in IMG/M
3300020063|Ga0180118_1336785Not Available982Open in IMG/M
3300020064|Ga0180107_1143380Not Available2316Open in IMG/M
3300020064|Ga0180107_1305080All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-201793Open in IMG/M
3300020065|Ga0180113_1044189Not Available2314Open in IMG/M
3300020065|Ga0180113_1259260Not Available873Open in IMG/M
3300020065|Ga0180113_1418128Not Available505Open in IMG/M
3300020066|Ga0180108_1238407Not Available1414Open in IMG/M
3300020067|Ga0180109_1030550Not Available511Open in IMG/M
3300020067|Ga0180109_1101740Not Available901Open in IMG/M
3300020067|Ga0180109_1225432Not Available1780Open in IMG/M
3300020067|Ga0180109_1434842Not Available1796Open in IMG/M
3300020068|Ga0184649_1124301Not Available2297Open in IMG/M
3300020068|Ga0184649_1364284Not Available583Open in IMG/M
3300020069|Ga0197907_10224549Not Available2353Open in IMG/M
3300020075|Ga0206349_1077449Not Available2351Open in IMG/M
3300020076|Ga0206355_1160957Not Available2340Open in IMG/M
3300020077|Ga0206351_10080423Not Available1193Open in IMG/M
3300020078|Ga0206352_10036093Not Available537Open in IMG/M
3300020080|Ga0206350_10675852Not Available516Open in IMG/M
3300021257|Ga0210329_142972Not Available1696Open in IMG/M
3300021258|Ga0210345_131042Not Available1011Open in IMG/M
3300021307|Ga0179585_1027069Not Available524Open in IMG/M
3300021307|Ga0179585_1035833Not Available1501Open in IMG/M
3300021307|Ga0179585_1076154All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-201173Open in IMG/M
3300021315|Ga0179958_1095234Not Available2243Open in IMG/M
3300021315|Ga0179958_1171348Not Available1321Open in IMG/M
3300021853|Ga0210323_1079410Not Available2353Open in IMG/M
3300021856|Ga0213850_1028775Not Available1206Open in IMG/M
3300021858|Ga0213852_1459382Not Available537Open in IMG/M
3300021859|Ga0210334_10269454Not Available2348Open in IMG/M
3300021938|Ga0213847_1065923Not Available1365Open in IMG/M
3300021947|Ga0213856_1024346Not Available571Open in IMG/M
3300021947|Ga0213856_1044674Not Available898Open in IMG/M
3300021947|Ga0213856_1124310Not Available670Open in IMG/M
3300021947|Ga0213856_1127568Not Available586Open in IMG/M
3300022195|Ga0222625_1199274Not Available580Open in IMG/M
3300022195|Ga0222625_1255961Not Available967Open in IMG/M
3300030546|Ga0247646_1004640Not Available1402Open in IMG/M
3300030552|Ga0247654_1106856Not Available615Open in IMG/M
3300030905|Ga0308200_1030495Not Available921Open in IMG/M
3300030987|Ga0308155_1038139Not Available502Open in IMG/M
3300030990|Ga0308178_1022151Not Available1018Open in IMG/M
3300030990|Ga0308178_1127486Not Available566Open in IMG/M
3300030993|Ga0308190_1015445Not Available1184Open in IMG/M
3300030993|Ga0308190_1016741Not Available1153Open in IMG/M
3300030997|Ga0073997_12155605Not Available548Open in IMG/M
3300030997|Ga0073997_12167259Not Available503Open in IMG/M
3300030997|Ga0073997_12232505Not Available1689Open in IMG/M
3300030997|Ga0073997_12260643Not Available516Open in IMG/M
3300031058|Ga0308189_10155064Not Available790Open in IMG/M
3300031082|Ga0308192_1015222Not Available950Open in IMG/M
3300031082|Ga0308192_1018028Not Available894Open in IMG/M
3300031099|Ga0308181_1103471All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20618Open in IMG/M
3300031100|Ga0308180_1007948Not Available885Open in IMG/M
3300031114|Ga0308187_10125275All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20829Open in IMG/M
3300031114|Ga0308187_10216026Not Available679Open in IMG/M
3300031114|Ga0308187_10248140Not Available646Open in IMG/M
3300031114|Ga0308187_10406582Not Available539Open in IMG/M
3300031123|Ga0308195_1002586Not Available1694Open in IMG/M
3300031123|Ga0308195_1011006Not Available992Open in IMG/M
3300031231|Ga0170824_114751978Not Available780Open in IMG/M
3300031231|Ga0170824_128045043Not Available572Open in IMG/M
3300031421|Ga0308194_10014216Not Available1616Open in IMG/M
3300031424|Ga0308179_1003257Not Available1281Open in IMG/M
3300031469|Ga0170819_10759496Not Available816Open in IMG/M
3300031677|Ga0307480_1001623Not Available1127Open in IMG/M
3300034447|Ga0370544_01769Not Available1365Open in IMG/M
3300034448|Ga0370540_09335Not Available607Open in IMG/M
3300034643|Ga0370545_002009Not Available2323Open in IMG/M
3300034661|Ga0314782_046926Not Available848Open in IMG/M
3300034662|Ga0314783_019734Not Available1080Open in IMG/M
3300034662|Ga0314783_025341All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20989Open in IMG/M
3300034662|Ga0314783_031205Not Available922Open in IMG/M
3300034662|Ga0314783_110279All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20597Open in IMG/M
3300034664|Ga0314786_005184Not Available1674Open in IMG/M
3300034664|Ga0314786_019106Not Available1080Open in IMG/M
3300034665|Ga0314787_033119Not Available793Open in IMG/M
3300034666|Ga0314788_028502All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20989Open in IMG/M
3300034666|Ga0314788_037876Not Available901Open in IMG/M
3300034666|Ga0314788_198046All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20517Open in IMG/M
3300034667|Ga0314792_045205Not Available951Open in IMG/M
3300034668|Ga0314793_082708All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium 68-20644Open in IMG/M
3300034671|Ga0314796_005708Not Available1664Open in IMG/M
3300034674|Ga0314799_008432Not Available963Open in IMG/M
3300034680|Ga0370541_057899Not Available519Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment32.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil10.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.85%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds6.16%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere4.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.11%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.42%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland2.74%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil2.74%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.74%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.05%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.37%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.37%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.37%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.68%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300006939Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A10 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300007219Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2013 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009580Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009586Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010082Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010085Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010090Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010103Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010116Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010117Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010120Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010138Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_B (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010139Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010144Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012374Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012405Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300019208Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019212Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019228Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019229Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019232Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019233Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019238Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019241Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019248Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019249Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019254Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019257Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019259Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019263Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020063Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020064Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020065Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020066Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020067Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020068Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020076Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)EnvironmentalOpen in IMG/M
3300020077Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021257Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.272 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021258Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.445 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021307Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021315Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021853Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.189 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021856Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - LL:C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021858Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021859Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021938Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - EE:C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021947Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - G-2016_32 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030546Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb11 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030552Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db7 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030987Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030997Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031082Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031100Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031114Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031123Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031424Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031677Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034447Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034448Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_115 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034662Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034664Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034665Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034666Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034667Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034671Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034674Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034680Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0081244_152547113300006939Tropical Rainforest SoilMSVSSTSSTVDKDRLPCSHRCQSQRLDGFYNRESVAR
Ga0075025_133071913300007219WatershedsMPPSSTDSAVDEDGLPRSHRCRTQRLDGFYDREFVARC
Ga0075025_134011513300007219WatershedsMPGTDDPSTPPSSTDPTVDEDRLPRSHRCQSQRLDGFYDREPAAR
Ga0115596_111481623300009580WetlandVPGTDDPSTPPSSTDSTVDEDRLPRSHRCQSQRLDGFYDRELAARC
Ga0115591_112244113300009586WetlandVPGTDDPSTPPSSTDSTVDEDRLPRSHRCQSQRLDGFYDRELAARCA
Ga0127469_19390013300010082Grasslands SoilVPGTDDPSTPSSSIDSAVDEDRLPRSHRCRSQRPYGFYDR
Ga0127445_106392113300010085Grasslands SoilVPGTDDPSTPSSSIDSAVDEDRLPRSHRCRSQRPYGFYDREPA
Ga0127471_109598123300010090Grasslands SoilVPGTDDPSTPSSSIDSAVDEDRLPRSHRCRSQRPYGFYDREPAAR
Ga0127500_101151113300010103Grasslands SoilMPPSSTDSAVDENRLSRSHRCQSQRLNGFYDRESVAR
Ga0127466_111712713300010116Grasslands SoilVPGTDDPSTPSSSIDSAVDEDRLPRSHRCRSQRPYGFYD
Ga0127449_110645813300010117Grasslands SoilMPGTDDPSMPARSTDSAVDEDRLPRSHRCQSQRLNGFYDR
Ga0127451_106641413300010120Grasslands SoilVPGTDDPSTPSSSIDSAVDEDRLPRSHRCRSQRPYGFYDREPAA
Ga0115595_103101513300010138WetlandVPGTDDPSTPPSSTDSTVDEDRLPRSHRCQSQRLDGFYDRELAA
Ga0127464_112803313300010139Grasslands SoilVPGTDDPSTPSSSIDSAVDEDRLPRSHRCRSQRLDGCYDRES
Ga0115593_125900623300010144WetlandVPGTDDPSTPPSSTDSTVDEDRLPRSHRCQSQRLDGFYDRE
Ga0126319_162857313300010147SoilVPGTDDPSTPPSSTDSTVDEDRLPRSHRCRTQRLDGFYDRESVARC
Ga0127503_1023358713300010154SoilVPRTDDLSTPPSSTDSTVDEDRLPRSHRCRTQRLDGFYDREPAA
Ga0127503_1055498113300010154SoilMPPSSTDSAVDEDGLPRSHRCRTQRLDGFYDREFV
Ga0127503_1072679113300010154SoilMPGTDDPSTPTSSTSSAVDEVCLPRSHRCQSQRLDGFYDRE
Ga0126349_100792013300010861Boreal Forest SoilVPGADDPSTPPRSIGSAVDEDRLPRSYRYRSQRLDGFYDREL
Ga0126349_106571013300010861Boreal Forest SoilMPGADDPSTPASSTGSTVDEDRLPRSHRCRLQRLDGFYDRELAARCA
Ga0150985_12002314133300012212Avena Fatua RhizosphereMPGTDDPSTPTSSTDSAVDEDKLPRSHRCRSQRLDGFYDRESAARCA
Ga0134039_120384013300012374Grasslands SoilMPPSSTDSAVDENRLSRSHRCQSQRLNGFYDRESVARC
Ga0134041_136335713300012405Grasslands SoilMPPSSPDSAVDEDGLPRSHRCRTQRLDGFYDREFVA
Ga0150984_10001268013300012469Avena Fatua RhizosphereVPGTDDPSTPPSSTDSAVDGNRLSRSHRCRTQRLDGFYDREPAAR
Ga0150984_11941559543300012469Avena Fatua RhizosphereMPGTDDPSTPTSSTDSAVDEDRLPRSHRCRSQRLDGFYDRESAARCA
Ga0180110_101533033300019208Groundwater SedimentVPGTDDPSTPPSSTDLTVDEDRLPRSHQCRTQRLDGFYDREPAARCA
Ga0180110_119531313300019208Groundwater SedimentVPGTDDPSTPVSSPDPAVDEDRLPRSHWCRTQRLDGFYDREPAARCA
Ga0180106_107065213300019212Groundwater SedimentVPGTDDPSTPESSISPAVDENRLSRSHWYRSQRLDGFYNREPAARCA
Ga0180106_112868423300019212Groundwater SedimentVPGTDDPSTPPSSSDSTVDEDRLPRSHRCRTQRLDGFYDREPAA
Ga0180106_127683423300019212Groundwater SedimentVPGTDDPSTPTNSTSAAVDGNRLSRSHLRRSQRPDGFYDREFVARCA
Ga0180106_130066023300019212Groundwater SedimentMPGTDDPSMPPSSTDSTVDEDRLPRSHRCQSQRLDGFYDREPAARCA
Ga0180119_119417723300019228Groundwater SedimentVPGTDDPSTPESSISPAVDENRLSRSHWYRSQRLDGFYNR
Ga0180119_120704213300019228Groundwater SedimentVPGTDDPSTPPSSTDSTVDEDRLPRSHRCRTQRLDGFYDRESVARCAA
Ga0180116_107610433300019229Groundwater SedimentVPGTDDPSTPASSTDLTVDEDRLPRSHQCRTQRLDGFYDREPAARCA
Ga0180116_108290123300019229Groundwater SedimentVPGTDDPSTPPSSTDLTVDEDRLPRSHQCQSQRLDGF
Ga0180116_109335113300019229Groundwater SedimentVPRTDDLSTPPSSTDSAVDEDRLPRSHRCRTQRLDGFYDREPAARCA
Ga0180116_112314713300019229Groundwater SedimentMPGTDDPSNPTSPTGEAVDGDCLLRSHHHQSQRPYGFYDRESAARCA
Ga0180114_108727413300019232Groundwater SedimentVPRTDDLSTPPSSTDSAVDEDRLPRSHRCRTQRLDGFYDREPAARC
Ga0184645_104838813300019233Groundwater SedimentMPPSSTDSAVDENRLSRSHRCQSQRLNGFYDRESVARCA
Ga0184645_130706813300019233Groundwater SedimentVPGTDDPSTPSSSTDSTVDEDRLPRSHRCRSQRLDGFYDREPAARC
Ga0184645_134986733300019233Groundwater SedimentMPGTDDPSTPPSSTDSTVDEDRLPRSHRCQSQRLDGFYDRE
Ga0180112_113159343300019238Groundwater SedimentVPGTDDPSTPPSSTDSTVDEDRLPRSHRCRSQRLDGFYDRESVARCA
Ga0187793_101959513300019241PeatlandMSSTDPAVDEDRLPRSHRCRSQRLDGFYDREPAAR
Ga0187793_103118213300019241PeatlandVPGTDDPSTEAGSTDPAVDEDRLPRSHRCRSQRLDGFYDREPAARC
Ga0180117_116920713300019248Groundwater SedimentVPGTDDPSTPPSSTDSTVDEDRLPRSHRCRTQRLDGFYDRESVARCA
Ga0180117_117336613300019248Groundwater SedimentMSVSSTNSTVDKDRLPCSHRCQSQRLDGFYNRESVARCA
Ga0180117_119120613300019248Groundwater SedimentVPGTDDPSTPASSTSAAVDGNRLSRSHLRRSQCPDGFYDREFVARCA
Ga0184648_129540113300019249Groundwater SedimentVPGTDDPSTPTSSTDPAVGEDRLPRSHRCRSQRLDGFYDREPAARCA
Ga0184648_131008733300019249Groundwater SedimentMPGTDDPSTPPSSTDKAVDEDRLPRSHRCRSQRLDGFYDRESVARCA
Ga0184648_151949213300019249Groundwater SedimentMPSSSTDSAVDEDGLPRSHRCRTQRLDGFYDREFVARC
Ga0184641_125152013300019254Groundwater SedimentVPGTDDPSTPVGSTGPTVDEDCLPRSHRYRSQRLDGFYDREPAARCA
Ga0184643_113244913300019255Groundwater SedimentVPGTDDPSTPPSSTDPAVDEDRLPRSHRCQSQRLDGFYDREPAARCA
Ga0184643_120363513300019255Groundwater SedimentVPGTDDPSTPPSSTDSAVDEDRLPRSHRCRSQRLDGFYDRESVARC
Ga0180115_100673713300019257Groundwater SedimentVPGTDDPSTPSSSTDSAVDEDRLPRSHRCRSQRLDGFYDREPAAR
Ga0184646_122016013300019259Groundwater SedimentVPGTDDPSTPSSSTDSAVDEDRLPRSHQCRSQRLDGFYDREPAAR
Ga0184647_113012923300019263Groundwater SedimentVPGTDDPSTPPSSTDTAVDEDRLPRSHRCRSQRLDGFYDRE
Ga0184644_106689613300019269Groundwater SedimentVPGTDDPSTPPSSTDSTVDEDRLPRSHRCRSQRLDGFYDREPAARC
Ga0184642_116969923300019279Groundwater SedimentVPGTDDPSTPPSSTDSTVDEDRLPRSHRCQSQRLDGFYDRESVAR
Ga0184642_153341413300019279Groundwater SedimentVPGTDDPSTPPSSTDSAVNEDRLPRSHRCRSQRPYGFYDREPAARCA
Ga0180118_107076223300020063Groundwater SedimentVPGTDDPSTPVGSTGPTVDEDCLPRSHRYRSQRLD
Ga0180118_133678513300020063Groundwater SedimentVPGTDDPSTPPSSTDLAVGEDRLPRSHQCRSQRLDGFYDREPAARCA
Ga0180107_114338013300020064Groundwater SedimentVPGTDDPSTPVSSPDPAVDEDRLPRSHWCRTQRLDGFYDREPAARC
Ga0180107_130508023300020064Groundwater SedimentVPGTDDPSTPPSSSDSTVDEDRLPRSHRCRTQRLDGFYDRESVARCA
Ga0180113_104418913300020065Groundwater SedimentVPGTDDPSTPPSSTDLAVGEDRLPRSHQCRSQRLDGFYDREPAAR
Ga0180113_125926013300020065Groundwater SedimentVPGTDDPSTPPSSTDLAVGEDRLPRSHQCRSQRLDGFYD
Ga0180113_141812813300020065Groundwater SedimentMPPSSPSSAVDEDCLPRSHRCRTQRLDGFYDREFVARCA
Ga0180108_123840713300020066Groundwater SedimentVPGTDDPSTPPSSTDSTVDEDRLPRSHRCRSQRLDGFYDRE
Ga0180109_103055013300020067Groundwater SedimentVPGTDDPSTPPSSTDLAVDEDRLPRSHQCRSQRLDGFYDREPAA
Ga0180109_110174023300020067Groundwater SedimentMPGTDDPSNPTSPTGEAVDGDYLLRSHHHQSQRPYGFYDRESA
Ga0180109_122543223300020067Groundwater SedimentVPGTDDPSTPPSSTDPAVDEDRLPRSHRCRSQRLDGFYDREPAARCA
Ga0180109_143484233300020067Groundwater SedimentMPGTDDPSMPPSSTDSTVDENRLSRSHRCQSQRLNGFYDRESVAR
Ga0184649_112430113300020068Groundwater SedimentVPGTDDPSTPPSSTDSTVDEDRLPRSHRCQSQRLNGFYDRESVARCA
Ga0184649_136428413300020068Groundwater SedimentMEIVPGTDDPSTPSSSTGSAVDEDRLPRSHRYRSQRPYGFYDRELAA
Ga0197907_1022454913300020069Corn, Switchgrass And Miscanthus RhizosphereVPGTDDPSTPVSSTSSAVDEDCLPRSHRCQSQRLDGFYDREPAARCA
Ga0206349_107744913300020075Corn, Switchgrass And Miscanthus RhizosphereVPGTDDPSTPVSSTSSAVDEDCLPRSHRCQSQRLDGFYDREPAARC
Ga0206355_116095713300020076Corn, Switchgrass And Miscanthus RhizosphereVPGTDDPSTPVSSTSSAVDEDCLPRSHRCRSQRLDGFYDREPAAR
Ga0206351_1008042313300020077Corn, Switchgrass And Miscanthus RhizosphereVPGTDDPSTPVSSTSSAVDEDCLPRSHRCQSQRLDGFYDREPAAR
Ga0206352_1003609313300020078Corn, Switchgrass And Miscanthus RhizosphereVPGTNDPSTPVSSTSSAVDEDYLPRSHRCQSQRLDGFYDREPAARCA
Ga0206350_1067585213300020080Corn, Switchgrass And Miscanthus RhizosphereVPGTDDPSTPVSSTSSAVDEDCLPRSHRCQSQRLDGFYDREPA
Ga0210329_14297233300021257EstuarineMPPSSTSSTVDEDRLPRSHRCRLQRLNGFYDRESVAR
Ga0210345_13104213300021258EstuarineMPPSSTSSTVDEDRLPRSHRCRLQRLNGFYDRESVARCA
Ga0179585_102706913300021307Vadose Zone SoilVPGTDDPSTPASSTGSAVDEDRLPRSHRCRTQRLNGFYDREPA
Ga0179585_103583313300021307Vadose Zone SoilVPGTDDPSTPASSTDSAVDEDRLPRSHRCRSQRLDGFYDREPAA
Ga0179585_107615423300021307Vadose Zone SoilVPGTDDPSTPPSSTDPAVDEDRLPRSHRCRSQRLDGFYDR
Ga0179958_109523413300021315Vadose Zone SoilVPGTDDPSTPASSTGSAVDEDRLPRSHRCRTQRLNGFYD
Ga0179958_117134813300021315Vadose Zone SoilMPPSSTDSAVDEDGLPRSHRCRTQRLDGFYDREFVARCA
Ga0210323_107941013300021853EstuarineMPTSSTDSTVDENRLSRSHRCQSQRLNGFYDRESVARCA
Ga0213850_102877523300021856WatershedsVPRTDDPSTPPSSTSPAVDEDRLPRSHRCRSQRLDGFYDRELAARCA
Ga0213852_145938213300021858WatershedsVPGTDDPSTPPSSTSPAVDEDRLPRSHRCRSQRLDGFYDRELAAR
Ga0210334_1026945413300021859EstuarineMPPSSTNSTVDEDRLPRSHRCQLQRLNGFYDRESVARCA
Ga0213847_106592313300021938WatershedsVPGTDDPSTPPSSTDSAVDEDRLPRSHRCRTQRLDGFYDREPA
Ga0213856_102434613300021947WatershedsVPGTDDPSTPPSSTDSTVDEDRLPRSHRCRTQRLDGFYDRESVAR
Ga0213856_104467413300021947WatershedsMPGTDDPSTPPSSTDSTVDEDRLPRSHRCQSQRLDGFYDREPAAR
Ga0213856_112431023300021947WatershedsVPGTDDPSTPPSSTDPAVDEDRLPRSHRCQSQRLDGFYDREPAARC
Ga0213856_112756813300021947WatershedsVPGTDDPSTPTSSTSSAVDEDSLPRSHRCRSQCLDGFYDREPAAR
Ga0222625_119927413300022195Groundwater SedimentVPGTDDPSTPLSSTDSTVDEDRLPRSHRCRSQRLDGFYDREPAA
Ga0222625_125596113300022195Groundwater SedimentVPGADDPSTPPSSIGSTVDEDRLPRSHRCRSQRLNGFYDREFVARCA
Ga0247646_100464013300030546SoilVPGTDDPSTPPSSTDLAVGEDRLPRSHQCQSQRLDGFYDR
Ga0247654_110685623300030552SoilVPGTDDPSTPPSSTDLAVGEDRLPRSHQCRSQRLDGFYDREPAARCEVR
Ga0308200_103049513300030905SoilVPGTDDPSTPLSSTDSTVDEDRLPRSHRCRSQRLDGFYDREPA
Ga0308155_103813913300030987SoilVPGTDDPSTPPSSTDPTVDEDRVPRSHRCQSQRLDGLYDREPAARCA
Ga0308178_102215113300030990SoilVPGTDDPSTPPSSTDSAVGEDRLPRSHRCRTQRLDGFYDRESV
Ga0308178_112748613300030990SoilVPGTDDPSTPPSSTDPAVDEDRLPRSHRCQSQRLDGFYDREPAAR
Ga0308190_101544513300030993SoilMPPSSTDSAVDENRLSRSHRCQSQRLNGFYDRESVA
Ga0308190_101674113300030993SoilMPPSSTDSTVDENRLSRSHRCQSQRLNGFYDRESVA
Ga0073997_1215560513300030997SoilVPGTDDPSTPVGSTGPTVDEDCLPRSHRYRSQRLDGFYDR
Ga0073997_1216725913300030997SoilVPGTDDPSTPPSSTDSTVDGNRLSRSHRCRTQRLDGFYDREPAA
Ga0073997_1223250513300030997SoilVPGTDDPSTPPSSTDPAVDEDRLPRSHRCRTQRLDGFYDREP
Ga0073997_1226064313300030997SoilVPGTDDPSTPPSSSDSAVDEDRLPRSHRCRTQRLDGFYDRE
Ga0308189_1015506413300031058SoilVPGTDDPSTPTSSTDPTVDEDRLPRSHRCRSQRLDGFYDREPA
Ga0308192_101522223300031082SoilMPTSSTDSAVDEDGLPRSHRCRTQRLDGFYDREFVARCA
Ga0308192_101802823300031082SoilVPGTDDPSTPLSSTDSTVDEDRLPRSHRCRSQRLDGFYDREPAARCA
Ga0308181_110347113300031099SoilVPGTDDPSTPVGSTGPTVDEDCLPRSHRYRSQRLDGFYDREPAARC
Ga0308180_100794813300031100SoilVPGTDDPSTPLSSTDSTVDEDRLPRSHRCQSQRLDGFYDREPAAR
Ga0308187_1012527513300031114SoilMPGTDDPSTPPSSTDSTVDEDRLPRSHRCRSQRLDGFYDR
Ga0308187_1021602613300031114SoilMEFVPGTDDPSTPSSSTGSAVDEDRLPRSHRYRSQRPYGFYDRELAARCA
Ga0308187_1024814013300031114SoilVPGTDDPSTPPSSTDSTVDEDRLPRSHRCRTQRLDGFYDREPAARCA
Ga0308187_1040658213300031114SoilVPGTDDPSTPTSSIGSAVDEDRLPRSHRCQSQRLNGFYDQESAARCA
Ga0308195_100258613300031123SoilMPPSSTDSTVDENRLSRSHRCQSQRLNGFYDRESVARCA
Ga0308195_101100623300031123SoilVPGTDDPSTPLSSTDSTVDEDRLPRSHRCQSQRLDGFYDREPAARC
Ga0170824_11475197823300031231Forest SoilVPGTDDPSTPTSSTDSTVDGNRLSRSHRCRTQRLDGFYDREPA
Ga0170824_12804504313300031231Forest SoilMPGTDDPSTPTSSTDPAVDEDRLPRSHRCRTQRLDGFYDREP
Ga0308194_1001421623300031421SoilVPGTDDPSTPPSSTDSAVDEDRLPRSYRCRSQRLDGFYDREPA
Ga0308179_100325723300031424SoilVPGTDDPSTPPSSTDSTVDEDRLPRSHRCRSQRLDGFYDREPAARCA
Ga0170819_1075949613300031469Forest SoilVPGADDPSTPPSSTDSAVDEDRLPRSHRCRTQRLDGFYDR
Ga0307480_100162323300031677Hardwood Forest SoilMPGTDDPSNPTSPTGEAVDGDCLLRSYHHQSQRPYGFYDRESAARCA
Ga0370544_01769_3_1133300034447SoilMPPSSTDSAVDEDGLPRSHRCRTQRLDGFYDREFVAR
Ga0370540_09335_2_1423300034448SoilMPGTDDPSTPPSSTDSTVDEDRLPRSHRCRTQRLDGFYDRESVARCA
Ga0370545_002009_2_1423300034643SoilMPGTDDPSTPPSSTDTAVDEDRLPRSHRCRSQRLDGFYDRESAARCA
Ga0314782_046926_715_8463300034661SoilMPGTDDPSTPPSSTDSTVDEDKLPRSHRCRTQRLDGFYDRESVA
Ga0314783_019734_944_10783300034662SoilMPGTDDPSTPPSSTDTAVDGDRLPRSHPCQSQRLDGFYDRESAAR
Ga0314783_025341_2_1423300034662SoilMPGTDDPSTPVGSTGPTVDEDCLPRSHRYRSQRLDGFYDREPAARCA
Ga0314783_031205_2_1423300034662SoilMPGTDDPSTPPSSTGLTVDEDRLPRSHQCQSQRLDGFYDREPAARCA
Ga0314783_110279_2_1153300034662SoilMPGTDDRSTPSSSSDPTVEEDRLPRSHRFRSQRLDGFY
Ga0314786_005184_2_1423300034664SoilMPGADDPSTPPSSTDLAVDEDRLPRSHQCQSQRLDGFYDREPAARCA
Ga0314786_019106_944_10783300034664SoilMPGTDDPSTPPSSTDPTVDGDRLPRSHRCRSLRLDGFSDREPAAR
Ga0314787_033119_3_1373300034665SoilMPGTDDPSTPPSSTSSTVDEDRLPRSHRCRTQRLDGFYDRESVAR
Ga0314788_028502_2_1363300034666SoilMPGTDDPSTPVGSTGPTVDEDCLPRSHRYRSQRLDGFYDREPAAR
Ga0314788_037876_1_1233300034666SoilMPGADVPSTPSSSTNSAVDEIRLSRSHRCQSQRLDGFYNRE
Ga0314788_198046_1_1413300034666SoilMPGIDEPSTPPRSSDSAVDEGSLPRSHRYRTQRLNGFYDREFVARCA
Ga0314792_045205_2_1423300034667SoilMPGTEDPSTPPSSTDSAVDEDRLPRSHRCRTQRLDGFYDREFVARCA
Ga0314793_082708_503_6433300034668SoilMPRTDDLSTPSSSTDSTVDEDRLPRSHRCRTQRLDGFYDREPAARCA
Ga0314796_005708_2_1423300034671SoilMPGADVPSTPSSSTNSAVDEIRLSRSHRCQSQRLDGFYNREPAARCA
Ga0314799_008432_3_1373300034674SoilMPGTDDPSTPPSSTSSTVDEDRLPRSDRCQSQRLVGFYDREPAAR
Ga0370541_057899_403_5193300034680SoilMPPSSTDSAVDEDGLPRSHRCRTQRLDGFYDRELVARCA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.