Metagenome / Metatranscriptome Family F049254

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049254
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	51 residues
Representative Sequence	LPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLVIAGWAS
Number of Associated Samples	128
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.04 %
% of genes near scaffold ends (potentially truncated)	91.84 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.782 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (23.809 % of family members)
Environment Ontology (ENVO)	Unclassified (14.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.898 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.53% β-sheet: 0.00% Coil/Unstructured: 39.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF01810	LysE	18.37
PF14224	DUF4331	5.44
PF04199	Cyclase	2.04
PF03706	LPG_synthase_TM	2.04
PF07167	PhaC_N	2.04
PF01152	Bac_globin	1.36
PF00107	ADH_zinc_N	1.36
PF13676	TIR_2	1.36
PF07690	MFS_1	1.36
PF02954	HTH_8	0.68
PF00356	LacI	0.68
PF00652	Ricin_B_lectin	0.68
PF00484	Pro_CA	0.68
PF07336	ABATE	0.68
PF08241	Methyltransf_11	0.68
PF12697	Abhydrolase_6	0.68
PF10009	DUF2252	0.68
PF02577	BFN_dom	0.68
PF01474	DAHP_synth_2	0.68
PF01494	FAD_binding_3	0.68
PF13701	DDE_Tnp_1_4	0.68
PF06445	GyrI-like	0.68
PF00908	dTDP_sugar_isom	0.68
PF00535	Glycos_transf_2	0.68
PF03055	RPE65	0.68
PF13578	Methyltransf_24	0.68
PF00708	Acylphosphatase	0.68
PF00501	AMP-binding	0.68
PF02585	PIG-L	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	2.04
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	2.04
COG3243	Poly-beta-hydroxybutyrate synthase	Lipid transport and metabolism [I]	2.04
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.36
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	1.36
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.68
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.68
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.68
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.68
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.68
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	0.68
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.68
COG3200	3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, class II	Amino acid transport and metabolism [E]	0.68
COG3670	Carotenoid cleavage dioxygenase or a related enzyme	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.68
COG5516	Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding	General function prediction only [R]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.46 %
Unclassified	root	N/A	43.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.46 %
Unclassified	root	N/A	43.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.78 %
Unclassified	root	N/A	43.54 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.68 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.98 %
Unclassified	root	N/A	43.54 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.98 %
Unclassified	root	N/A	43.54 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.93 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.54 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	4.08 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.72 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	1.36 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.36 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.36 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.68 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.68 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.68 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.54 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.72 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	1.36 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.36 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.68 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.68 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.68 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.68 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.68 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.36 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.68 %
Rugosimonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora	0.68 %
Acidipropionibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Acidipropionibacterium	0.68 %
Actinocrinis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis	0.68 %
Cryobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.68 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.68 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.36 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	0.68 %
Rugosimonospora africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	0.68 %
Actinocrinis puniceicyclus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	0.68 %
unclassified Actinospica	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica	0.68 %
Nocardiopsis algeriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis algeriensis	0.68 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	0.68 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.68 %
Acidipropionibacterium acidipropionici	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Acidipropionibacterium → Acidipropionibacterium acidipropionici	0.68 %
Cryobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	0.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.36 %
Kribbella sp. VKM Ac-2527	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2527	0.68 %
Streptomyces sp. AA4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA4	0.68 %
Actinospica sp. MGRD01-02	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	0.68 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	0.68 %
Rugosimonospora africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	0.68 %
Actinocrinis puniceicyclus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	0.68 %
Nocardiopsis algeriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis algeriensis	0.68 %
Acidipropionibacterium acidipropionici	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Acidipropionibacterium → Acidipropionibacterium acidipropionici	0.68 %
Cryobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	0.68 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101122427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	674	Open in IMG/M
3300004629\|Ga0008092_11074898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300004635\|Ga0062388_100733667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	927	Open in IMG/M
3300004635\|Ga0062388_101423445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300005181\|Ga0066678_10166543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1389	Open in IMG/M
3300005329\|Ga0070683_100628477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1028	Open in IMG/M
3300005435\|Ga0070714_100233512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1695	Open in IMG/M
3300005436\|Ga0070713_101121032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	761	Open in IMG/M
3300005468\|Ga0070707_100971505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300005561\|Ga0066699_10471657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	898	Open in IMG/M
3300005602\|Ga0070762_10882720	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005610\|Ga0070763_10865081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. AA4	537	Open in IMG/M
3300005712\|Ga0070764_10819325	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005842\|Ga0068858_100195877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1909	Open in IMG/M
3300005950\|Ga0066787_10103762	Not Available	608	Open in IMG/M
3300006028\|Ga0070717_10726590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	902	Open in IMG/M
3300006028\|Ga0070717_11957000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300006052\|Ga0075029_101299024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Acidipropionibacterium → Acidipropionibacterium acidipropionici	510	Open in IMG/M
3300006163\|Ga0070715_10516163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300006172\|Ga0075018_10412469	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300006358\|Ga0068871_101223483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300006755\|Ga0079222_10883187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M
3300006804\|Ga0079221_10200460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1093	Open in IMG/M
3300006804\|Ga0079221_10374765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	870	Open in IMG/M
3300006804\|Ga0079221_10456231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813	Open in IMG/M
3300006806\|Ga0079220_11347410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300006854\|Ga0075425_101024234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	942	Open in IMG/M
3300006904\|Ga0075424_102452529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300009089\|Ga0099828_10272191	Not Available	1521	Open in IMG/M
3300009174\|Ga0105241_10629611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300009521\|Ga0116222_1030327	Not Available	2401	Open in IMG/M
3300009525\|Ga0116220_10081058	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300009665\|Ga0116135_1099688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300009698\|Ga0116216_10310429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinocrinis → Actinocrinis puniceicyclus	961	Open in IMG/M
3300010320\|Ga0134109_10043645	Not Available	1466	Open in IMG/M
3300010379\|Ga0136449_102441491	Not Available	752	Open in IMG/M
3300010876\|Ga0126361_10526443	Not Available	1227	Open in IMG/M
3300010876\|Ga0126361_11282334	Not Available	1128	Open in IMG/M
3300010880\|Ga0126350_12441462	Not Available	565	Open in IMG/M
3300010937\|Ga0137776_1596727	Not Available	645	Open in IMG/M
3300012285\|Ga0137370_10804336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300014201\|Ga0181537_10952352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300014325\|Ga0163163_11404608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300014838\|Ga0182030_10979166	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300014969\|Ga0157376_13062744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300017926\|Ga0187807_1060904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	1172	Open in IMG/M
3300017932\|Ga0187814_10095180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1098	Open in IMG/M
3300017932\|Ga0187814_10451587	Not Available	504	Open in IMG/M
3300017934\|Ga0187803_10411117	Not Available	549	Open in IMG/M
3300017937\|Ga0187809_10238345	Not Available	655	Open in IMG/M
3300017955\|Ga0187817_10777966	Not Available	611	Open in IMG/M
3300017961\|Ga0187778_11115204	Not Available	550	Open in IMG/M
3300017973\|Ga0187780_10370660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1013	Open in IMG/M
3300017974\|Ga0187777_10869686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	647	Open in IMG/M
3300018034\|Ga0187863_10369072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300018043\|Ga0187887_10025173	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	3795	Open in IMG/M
3300018044\|Ga0187890_10134566	Not Available	1421	Open in IMG/M
3300018046\|Ga0187851_10279426	Not Available	972	Open in IMG/M
3300018085\|Ga0187772_10481949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300018090\|Ga0187770_10954499	Not Available	689	Open in IMG/M
3300020581\|Ga0210399_10087598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	2534	Open in IMG/M
3300020583\|Ga0210401_10939022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300021178\|Ga0210408_10724704	Not Available	782	Open in IMG/M
3300021374\|Ga0213881_10600659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300021432\|Ga0210384_10181180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1893	Open in IMG/M
3300021474\|Ga0210390_10725937	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300021478\|Ga0210402_10849992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	839	Open in IMG/M
3300021478\|Ga0210402_11624358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300021479\|Ga0210410_10282539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1489	Open in IMG/M
3300021559\|Ga0210409_10710395	Not Available	876	Open in IMG/M
3300021559\|Ga0210409_11602686	Not Available	527	Open in IMG/M
3300025527\|Ga0208714_1088072	Not Available	625	Open in IMG/M
3300025898\|Ga0207692_10040718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2295	Open in IMG/M
3300025922\|Ga0207646_10514181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1078	Open in IMG/M
3300025922\|Ga0207646_10924010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300025928\|Ga0207700_10228152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1582	Open in IMG/M
3300025928\|Ga0207700_10724660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300025928\|Ga0207700_11901938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300026088\|Ga0207641_12054432	Not Available	572	Open in IMG/M
3300026326\|Ga0209801_1239361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300027568\|Ga0208042_1127070	Not Available	642	Open in IMG/M
3300027725\|Ga0209178_1291353	Not Available	598	Open in IMG/M
3300027884\|Ga0209275_10402132	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300028716\|Ga0307311_10015581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1851	Open in IMG/M
3300028742\|Ga0302220_10354115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300028747\|Ga0302219_10077005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1251	Open in IMG/M
3300028759\|Ga0302224_10400355	Not Available	557	Open in IMG/M
3300028773\|Ga0302234_10243747	Not Available	774	Open in IMG/M
3300028780\|Ga0302225_10369993	Not Available	675	Open in IMG/M
3300028801\|Ga0302226_10016082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	4145	Open in IMG/M
3300028806\|Ga0302221_10493813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300028877\|Ga0302235_10199937	Not Available	881	Open in IMG/M
3300028879\|Ga0302229_10084509	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300029882\|Ga0311368_10493324	Not Available	882	Open in IMG/M
3300029882\|Ga0311368_10539571	Not Available	832	Open in IMG/M
3300029943\|Ga0311340_10760376	Not Available	822	Open in IMG/M
3300029944\|Ga0311352_10143222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2073	Open in IMG/M
3300029944\|Ga0311352_11186474	Not Available	580	Open in IMG/M
3300029993\|Ga0302304_10269067	Not Available	626	Open in IMG/M
3300029999\|Ga0311339_10248880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1957	Open in IMG/M
3300029999\|Ga0311339_10927672	Not Available	823	Open in IMG/M
3300029999\|Ga0311339_11352810	Not Available	642	Open in IMG/M
3300030007\|Ga0311338_11149963	Not Available	740	Open in IMG/M
3300030056\|Ga0302181_10157158	Not Available	1081	Open in IMG/M
3300030058\|Ga0302179_10205108	Not Available	870	Open in IMG/M
3300030399\|Ga0311353_11212306	Not Available	622	Open in IMG/M
3300030503\|Ga0311370_10323429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1981	Open in IMG/M
3300030509\|Ga0302183_10233627	Not Available	715	Open in IMG/M
3300030509\|Ga0302183_10373158	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300030520\|Ga0311372_11780979	Not Available	736	Open in IMG/M
3300030520\|Ga0311372_12416228	Not Available	594	Open in IMG/M
3300030580\|Ga0311355_10593554	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300030580\|Ga0311355_11155804	Not Available	686	Open in IMG/M
3300030586\|Ga0265393_1179019	Not Available	547	Open in IMG/M
3300030618\|Ga0311354_10292524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2527	1688	Open in IMG/M
3300030627\|Ga0210269_10307244	Not Available	554	Open in IMG/M
3300030687\|Ga0302309_10351367	Not Available	723	Open in IMG/M
3300031028\|Ga0302180_10653258	Not Available	502	Open in IMG/M
3300031234\|Ga0302325_12399333	Not Available	633	Open in IMG/M
3300031236\|Ga0302324_102144649	Not Available	695	Open in IMG/M
3300031525\|Ga0302326_11511743	Not Available	899	Open in IMG/M
3300031720\|Ga0307469_11678758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	612	Open in IMG/M
3300031723\|Ga0318493_10702834	Not Available	567	Open in IMG/M
3300031744\|Ga0306918_11500408	Not Available	515	Open in IMG/M
3300031751\|Ga0318494_10825829	Not Available	543	Open in IMG/M
3300031753\|Ga0307477_10919688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300031765\|Ga0318554_10392733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	788	Open in IMG/M
3300031782\|Ga0318552_10328068	Not Available	779	Open in IMG/M
3300031795\|Ga0318557_10095122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1313	Open in IMG/M
3300031859\|Ga0318527_10505794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300031890\|Ga0306925_12219538	Not Available	510	Open in IMG/M
3300031897\|Ga0318520_10633267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300031912\|Ga0306921_11035854	Not Available	924	Open in IMG/M
3300031939\|Ga0308174_10963251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300031939\|Ga0308174_11330660	Not Available	614	Open in IMG/M
3300031946\|Ga0310910_10757838	Not Available	766	Open in IMG/M
3300032065\|Ga0318513_10197003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	970	Open in IMG/M
3300032067\|Ga0318524_10158190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1148	Open in IMG/M
3300032089\|Ga0318525_10222093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300032090\|Ga0318518_10671612	Not Available	527	Open in IMG/M
3300032261\|Ga0306920_101939546	Not Available	827	Open in IMG/M
3300032770\|Ga0335085_11950038	Not Available	597	Open in IMG/M
3300032828\|Ga0335080_12183261	Not Available	532	Open in IMG/M
3300032892\|Ga0335081_10273960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2256	Open in IMG/M
3300033824\|Ga0334840_062574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis algeriensis	1084	Open in IMG/M
3300034124\|Ga0370483_0037591	Not Available	1493	Open in IMG/M
3300034163\|Ga0370515_0072117	Not Available	1503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.56%
Host-Associated	Host-Associated	5.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.99%
Aquatic	Environmental → Aquatic	11.56%
Plants	Host-Associated → Plants	5.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.82%
Peat	Environmental → Terrestrial → Peat	24.49%
Freshwater	Environmental → Aquatic → Freshwater	9.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.72%
Sediment	Environmental → Aquatic → Sediment	1.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.36%
Roots	Host-Associated → Plants → Roots	1.36%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	24.49%
Loam	Environmental → Terrestrial → Soil → Loam	12.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.36%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.36%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	24.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.36%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.68%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.68%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	23.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.08%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.40%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.04%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.04%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.36%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.68%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.68%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030586	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE041SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030627	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE095SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1011224272	3300002245	Forest Soil	TAWSLTERIPVYLHVYTLAVAFVAFGISANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYVLIIAGWAS*
Ga0008092_110748981	3300004629	Tropical Rainforest Soil	TSANWISSKPRFILPAVLLALPVARLVAPLRTAVLVPLIGVLAVATTWFGLYLAIIAKWTP*
Ga0062388_1007336673	3300004635	Bog Forest Soil	LPAFLLALPLARLLAPVRTSVLVPLIMVLAAASTWFGLYLLAIGGWAP*
Ga0062388_1014234452	3300004635	Bog Forest Soil	RYFLPAVLLALPVARLLASLRTSVLVPLIVVFALASTWIGVYLVVIAGWAS*
Ga0066678_101665433	3300005181	Soil	VLLALPVARLLAPLRAAVLIPLVGVLTVATTWFGLYVTVIAKWTP*
Ga0070683_1006284771	3300005329	Corn Rhizosphere	MLLALPVARLLTPLRTSVLVPLVGVLAVATTWFGLYLAVIARWTP*
Ga0070714_1002335123	3300005435	Agricultural Soil	PVARLLAPLRAAVLVPLVGVLTVATTWFGLYVTVIAKWTP*
Ga0070713_1011210321	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PAILLALPVARLLAPVRTAVLVPLIVVLTVLSTWYGLYLVAIAGWVP*
Ga0070707_1009715053	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	NWVSSKPRFFLPAVLLALPLARLLASLRTSVLVPLIVVLAALSTWVGVYLVVIARWAP*
Ga0066699_104716572	3300005561	Soil	PAVLLALPLARLLAPVRTWVLVPLTGALAVVSTWFGLYLVVIGHWAP*
Ga0070762_108827201	3300005602	Soil	VYTVMVALVSFGISANWLSEKPRYFLPAFLLALPVARLLAPLRTSVLIPLIFVFTLASTWIGVYLLVIAHWAS*
Ga0070763_108650811	3300005610	Soil	PRFMLPAVLLALPLARLLAPLRTSVLVPLIGVLAVATTWFGVYLPVIARWTP*
Ga0070764_108193251	3300005712	Soil	LLALPVARLLAPLRTSVLIPLIFVFTLASTWIGVYLLVIAHWAS*
Ga0068858_1001958772	3300005842	Switchgrass Rhizosphere	VLLALPVARLLAPLRTAVLVPLVGVLAVATTWFGLYVTVIAKWTP*
Ga0066787_101037621	3300005950	Soil	RLLAPLRTSVLVPLVVSLALASGWLGLYLEVIARWAP*
Ga0070717_107265901	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTFATSANWISSKPRFVLPAMLLALPVARLLAPLRTSVLVPLVGVLAVATTWFGLYLAVI
Ga0070717_119570002	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HERQLDQLQAALPAARVLLALPVARLLVPLVGVLTVATTWFCLYVTVIAKWTP*
Ga0075029_1012990241	3300006052	Watersheds	PAVLLALPMARLLAPLRTSVLVPLLAVLTAASTWFGLYLAIIAKWAP*
Ga0070715_105161632	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	APLRTSVLVPLVGVLAVATTWFGLYLAVIVRWTP*
Ga0075018_104124692	3300006172	Watersheds	LAPLRTSVLVPLIAVLTALSTWFGLYLIVIGRWAP*
Ga0068871_1012234832	3300006358	Miscanthus Rhizosphere	LPAMLLALPVARLLAPLRTSVLVPLVGVLAVATTWFGLYLAVIARWTP*
Ga0079222_108831871	3300006755	Agricultural Soil	VMAFTSSANWVSSKPRFFLPAVLLALPLARLLASLRTSVLVPLVVVLTVLSTWVGVYLGVIARWAP*
Ga0079221_102004603	3300006804	Agricultural Soil	PRFVLPAMLLALPVARLLAPLRTSVLVPLVGVLAVATTWSGLYLAVIARWAP*
Ga0079221_103747652	3300006804	Agricultural Soil	ANWVSSKPRFFLPAVLLALPLARLLASLRTSVLVPLIVVLTVLSTWAGVYIGVIARWAP*
Ga0079221_104562311	3300006804	Agricultural Soil	MTFATSANWISSKPRFVLPAMLLALPVARLLAPLRTAALVPLVGVLAVAATWFGLYLTIIARWTP*
Ga0079220_113474101	3300006806	Agricultural Soil	VLLALPVARLLAPLRTSVLVPLIVVLTLASTWFGLYLLVIARLAS*
Ga0075425_1010242341	3300006854	Populus Rhizosphere	VARLLAPLRTSVLVPLVGVLAVATTWFGLYLAVIARWTP*
Ga0075424_1024525292	3300006904	Populus Rhizosphere	PAMLLALPVARLLAPLRTSVLVPLVGVLAVAAAWFGLYLTIIARWTP*
Ga0099828_102721914	3300009089	Vadose Zone Soil	LPAVLLALPVARLLAPLRTSVLVPLIVVLTAATTWFGLYLAVIARWTP*
Ga0105241_106296111	3300009174	Corn Rhizosphere	MLLALPVARLLAPLRTAALVPLVGVLAVAATWFGLYLTIIARWTP*
Ga0116222_10303271	3300009521	Peatlands Soil	ALPVARLLAPLRTSVLVPLIAILAVATTWFGLYLTVIAHWTP*
Ga0116220_100810583	3300009525	Peatlands Soil	LAPLRTSVVVPLLAVLTAASTWFGLYLLVIAKWAS*
Ga0116135_10996883	3300009665	Peatland	LAAPLRTPVLVGLIAVLAVVSTWFGLYLLVLTGWAP*
Ga0116216_103104291	3300009698	Peatlands Soil	LAPLRTSVLIPLLVVLTVASTWFGLYLAIIAQWAP*
Ga0134109_100436452	3300010320	Grasslands Soil	FLLPAVLLALPVARLLAPLRTAVLVPLIGVLTVATTWFGLYLTVIQRWAP*
Ga0136449_1024414911	3300010379	Peatlands Soil	PLARLLAPLRTSVLVPLIGVLAVATTWFGLYLTVIARWTP*
Ga0126361_105264432	3300010876	Boreal Forest Soil	LLAPLRTSVLVPLIGVLAVATTWFGVYLTVIARWTP*
Ga0126361_112823342	3300010876	Boreal Forest Soil	LARLLAPLRTSVLVTLIAVLTAASTWFPMYLMIIAKWAP*
Ga0126350_124414621	3300010880	Boreal Forest Soil	TTGANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLIPLIIAITLATTWMGVYLLVIARLAS*
Ga0137776_15967272	3300010937	Sediment	AFTTSANWLSAKPRYFLPAVLLALPVARLLTPLRTSVLVPLIVVLTLASTWIGLYLLVIARLAS*
Ga0137370_108043361	3300012285	Vadose Zone Soil	LPAVLLALPLARLLASLRTSVLVPLIVVLTVLSTWVGVYIGVIARWAP*
Ga0181537_109523522	3300014201	Bog	ALGISANWLSEKPRYFLPAVLLALPVARLLAPVRTSVLVPLIAVFTVVSTWIGVYVLIIAGWAS*
Ga0163163_114046081	3300014325	Switchgrass Rhizosphere	MLLALPVARLLTPLRTSVLVPLVGVLAVAATWFGLYLTIIARWTP*
Ga0182030_109791661	3300014838	Bog	LPAVLLALPLARLLAPLRTSVLVSLIAVLTAASTWFGMYLIIIAKWAP*
Ga0157376_130627442	3300014969	Miscanthus Rhizosphere	AVLLALPVARLLAPLRAAVLVPLVGVLTVATTWFGLYVTVIAKWTP*
Ga0187807_10609042	3300017926	Freshwater Sediment	MLPACLLTLPVARLLAPFRTWLLVPLIVVLTLASTWMGVYLLVIAGLAS
Ga0187814_100951803	3300017932	Freshwater Sediment	VARRLAPLRTSVLVPLIIVLTVATTWMGVYLLAVAGLAS
Ga0187814_104515872	3300017932	Freshwater Sediment	LMLVLAILAAVALTAWSLTELIPVYLHVYTVMVAVMAFGTSASWLSVKPRFFLPAFLLALPVARRLAPLRTSVLVPLIIVLTLASTWMGIYLLAIAGMAS
Ga0187803_104111171	3300017934	Freshwater Sediment	MLPACLLTLPVARLLAPFRTWLLVPLIVVLTLASTWMGVYLLAVAGLAS
Ga0187809_102383452	3300017937	Freshwater Sediment	VAFGTSAILLSVKPRFFLPAFLLALPVARRLAPLRTSVLVPLIIVLTLASTWMGIYLLAIAGMAS
Ga0187817_107779661	3300017955	Freshwater Sediment	PRFVLPAVLLALPVARLLAPLRTSVLVPLIGVLAVATTWFGLYLTVIARWTP
Ga0187778_111152042	3300017961	Tropical Peatland	LLARVRTPVLVLLIGVLAAASTWFGLYLLAIVGWAP
Ga0187780_103706601	3300017973	Tropical Peatland	RFLLPAVLLALPLARLLAPVRTSVLVPLIGVLAAATTWFGLYLTVIAKWTP
Ga0187777_108696862	3300017974	Tropical Peatland	VVMALMSSANWIGSKPRFILPAILLALPVARLLAPVRTSVLVPLIGVLTVLSTWFSLYLNVIARWAP
Ga0187863_103690721	3300018034	Peatland	ANWISSKPRFVLPAMLLALPVARLLAPLRTSVLVPLIGVLAVATTWFGLYLAIIARWTP
Ga0187887_100251731	3300018043	Peatland	SEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVMFTLASTWIGVYLVIIAGWAS
Ga0187890_101345663	3300018044	Peatland	ALPLARLAAPLRTPVLVGLIAVLTVVSTWFGLYLLVITGWAP
Ga0187851_102794261	3300018046	Peatland	LPLARLAAPLRTPVLVGLIAALTVVSTWFGLYLLVICGWVP
Ga0187772_104819492	3300018085	Tropical Peatland	VLLALPLARLLVAVRTSAVPLIGVLAAATTWFSLHLTVIAERTP
Ga0187770_109544992	3300018090	Tropical Peatland	LALPAARLLAPLRTSVLVPLIVVLTLASTWMGVYLLVIAHLAS
Ga0210399_100875983	3300020581	Soil	MAFTSSATWVSSKPRFFLPAVLLALPLARLLASLRTSVLVPLIVVLAVLSTWVGVYLGVIARWAP
Ga0210401_109390221	3300020583	Soil	LLPAVLLALPVARLLAPLRAAVLVPLIGVLTVATTWFGLYVTVIAKWTP
Ga0210408_107247041	3300021178	Soil	GASETWFSSKLRFLLPAVLLALPPARALARLRTPVLIPLVAAVAIGTTWFGLYLSVIAKLPP
Ga0213881_106006591	3300021374	Exposed Rock	LLAPVRTSVLVPLFGVLAAATTWFGLYLTVIATWTP
Ga0210384_101811803	3300021432	Soil	TSSANWVSSKPRFFLPAVLLALPLARLLASLRTSVLVPLIVVLAVLSTWVGVYLGVIARWAP
Ga0210390_107259371	3300021474	Soil	TERIPVYLHVYTVMVALVSFGISANWLSEKPRYFLPAFLLALPVARLLAPLRTSVLIPLIFVFTLASTWIGVYLLVIAHWAS
Ga0210402_108499922	3300021478	Soil	LAPLRTSVLVPLIVVLTLASTWIGVYLLVIARLAS
Ga0210402_116243582	3300021478	Soil	VTTRAYWISSKPRFLLPAVLLALPVARLLTPLRTAVLVPLVGELTVATTWFCLYVTVIAKWTP
Ga0210410_102825391	3300021479	Soil	FLPAVLLALPLARLLASLRTSVLVPLIVVLAVLSTWVGVYLGVIARWAP
Ga0210409_107103951	3300021559	Soil	RLLASLRTSVLVPLIVGLAVLSTWVGVYLGVIARWAP
Ga0210409_116026861	3300021559	Soil	KPRFFLPAVLLALPLARLLASLRTSVLVPLIVVLAVLSTWVGVYLGVIARWAP
Ga0208714_10880721	3300025527	Arctic Peat Soil	AVLLALPLARLLAPVRTSVLVPLIGVLTVATTWFGLYLMVISRWAP
Ga0207692_100407184	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LPAVLLALPLARLLASLRTSVLVPLIVVLTVLSTWAGVYIGVIARWAP
Ga0207646_105141813	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LARLLASLRTSVLVPLIVVLTVLSTWVGVYLGVIARWAP
Ga0207646_109240102	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FFLPAVLLALPLARLLASLRTSVLVPLIVVLAALSTWVGVYLVVIARWAP
Ga0207700_102281521	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AILLALPVARLLAPVRTAVLVPLIVVLTVLSTWYGLYLVAIAGWVP
Ga0207700_107246601	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	NWISSKPRFVLPAMLLALPAARLLAPLRTSVLVPLVGVLAVATTWFGLYLAVIARWTP
Ga0207700_119019382	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SSKPRFVLPAMLLALPVARLLAPLRTAALVPLVGVLAVAATWFGLYLTIIARWTP
Ga0207641_120544321	3300026088	Switchgrass Rhizosphere	MLLALPVARLLTPLRTSVLVPLVGVLAVATTWFGLYLAVIAR
Ga0209801_12393611	3300026326	Soil	VLLALPVARLLAPLRAAVLIPLVGVLTVATTWFGLYVTVIAKWTP
Ga0208042_11270701	3300027568	Peatlands Soil	VLLALPVARLLAPLRTSVLVPLIGVLAVATTWFGLYLTVIARWTP
Ga0209178_12913532	3300027725	Agricultural Soil	MTFATSANWISSKPRFVLPAMLLALPVARLLAPLRTAALVPLVGVLAVAATWFGLYLTIIARWTP
Ga0209275_104021321	3300027884	Soil	VYTVMVALVSFGISANWLSEKPRYFLPAFLLALPVARLLAPLRTSVLIPLIFVFTLASTWIGVYLLVIAHWAS
Ga0307311_100155812	3300028716	Soil	PLARLLAPLRTAVLVPLIGVLTVAATWFGLYLMVIAKWAP
Ga0302220_103541152	3300028742	Palsa	IPVYLHVYTVVVAVVAFGISANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLIIAGWAS
Ga0302219_100770051	3300028747	Palsa	WLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLVIAGWAS
Ga0302224_104003552	3300028759	Palsa	PLARLAAPLRTPVLVGLIAVLTVVSTWFGLYLLVITGWAP
Ga0302234_102437471	3300028773	Palsa	LPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLVIAGWAS
Ga0302225_103699931	3300028780	Palsa	RLLAPLRTSVLVPLIVVFTLASTWIGVYLLVIAGWAS
Ga0302226_100160824	3300028801	Palsa	WMSSKPRFILPAVLLTLPIARLLAPLRTSALIPLLAVFTAASAWFGLYLVIIARFAS
Ga0302221_104938132	3300028806	Palsa	AVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLVIAGWAS
Ga0302235_101999371	3300028877	Palsa	TERIPVYLHVYTVAVAFVAFGISANWLSEKPRYFLPAVLLALPVARLLTPLRTSVLVPLIVVFTLASTWIGVYVLIIAGWAS
Ga0302229_100845091	3300028879	Palsa	SEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIAVFTLASTWIGVYVLIIAGWAS
Ga0311368_104933241	3300029882	Palsa	FGISANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLIIAGWAS
Ga0311368_105395712	3300029882	Palsa	ALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLIIAGWAS
Ga0311340_107603762	3300029943	Palsa	LARLAAPLRTPVLVGLIAVLTVVSTWFGLYLLVITGWAP
Ga0311352_101432221	3300029944	Palsa	PVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLIIAGWAS
Ga0311352_111864741	3300029944	Palsa	LLPAVLLTLPLARLAAPLRTPVLVGLIAVLTVVSTWFGLYLLVITGWAP
Ga0302304_102690671	3300029993	Palsa	VAFTISANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLVIAHWAS
Ga0311339_102488802	3300029999	Palsa	VYLHVYTVVVAVVAFTISANWLSEKPRYFLPAVLLALPVARLLAPLRASVLVPLIVVFTLASTWIGVYLLVIAGWAS
Ga0311339_109276723	3300029999	Palsa	ARLLAPLRTSVLVPLIAVFTLASTWIGVYLLIIAGWAS
Ga0311339_113528101	3300029999	Palsa	RLLAPLRTSVLVPLIVVFTLASTWISVYLLVIAGWAS
Ga0311338_111499633	3300030007	Palsa	ALPVARLLAPLRTSVLVPLIAVFTLASTWIGVYLLIIAGWAS
Ga0302181_101571581	3300030056	Palsa	AVALTAWSLTERIPVYLHVYTVLVAFVAFTISANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLIPLIVVFTLASTWIGVYLLVIAGWAS
Ga0302179_102051082	3300030058	Palsa	LPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLIIAGWAS
Ga0311353_112123061	3300030399	Palsa	VSFGISANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIFVFTLASTWIGVYLLVIAHWAS
Ga0311370_103234291	3300030503	Palsa	FSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIAVFTLASTWIGVYVLIIAGWAS
Ga0302183_102336271	3300030509	Palsa	VLLTLPIARLLAPLRTSALIPLLAVFTAASAWFGLYLVIIARFAS
Ga0302183_103731581	3300030509	Palsa	LALPLARLLAPLRTSVLVPLIVALALASGWLGLYLEVIAKWAP
Ga0311372_117809791	3300030520	Palsa	FTISANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLVIAGWAS
Ga0311372_124162282	3300030520	Palsa	LPLARLLAPLRTSVLVPLIVSLALASGWLGLYLEVIAKWAP
Ga0311355_105935542	3300030580	Palsa	PAVLLALPLARLLAPLRTSVLVPLIVALALASGWLGLYLEVIAKWAP
Ga0311355_111558042	3300030580	Palsa	RLLAPLRTSILVPLIVVFTLVSTWIGVYLLIIAGWAS
Ga0265393_11790191	3300030586	Soil	RLLAPVRTSVLVPLFAVLTALSTWFGLYLIVIARWAP
Ga0311354_102925242	3300030618	Palsa	NWLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIFVFTLASTWIGVYLLVIAHWAS
Ga0210269_103072441	3300030627	Soil	PAVLLALPVARLLAPVRTSVLVPLFAVLTALSTWFGLYLIVIARWAP
Ga0302309_103513672	3300030687	Palsa	AVLLTLPIARLLAPLRTSALIPLLAVFTAASAWFGLYLVIIARFAS
Ga0302180_106532581	3300031028	Palsa	AFVAFTISANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLIPLIVVFTLASTWIGVYLLVIAGWAS
Ga0302325_123993331	3300031234	Palsa	YTVVVAFVAFTISANWLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLIIAGWAS
Ga0302324_1021446492	3300031236	Palsa	LARLLAPLRTSVLVPLIVSLALASGWLGLYLEVIAKWAP
Ga0302326_115117432	3300031525	Palsa	ERIPVYLHVYTVVVAFVAFTISANWLSEKPRYFLPAVLLALPVARLLAPLRTSILVPLIVVFTLVSTWIGVYLLIIAGWAS
Ga0307469_116787581	3300031720	Hardwood Forest Soil	LPAILLALPVARLLAPVRTAVLVPLIVVLTVLSTWYGLYLVAIAGWVP
Ga0318493_107028341	3300031723	Soil	LPAVLLTLPVARLLARVRTPVLVLLIGVLAAASTWFGLYLLAIVGWAP
Ga0306918_115004082	3300031744	Soil	VVAVMAFTSSANWVSSKPRFFLPAVLLALPLARLLASLRTSVLVPLIVVLTVLSTWVGVYLAVIAGWAP
Ga0318494_108258291	3300031751	Soil	ARLLAPLRTSILVPLIIVLTLASTWIGVYLLVIARLAS
Ga0307477_109196881	3300031753	Hardwood Forest Soil	ALPVARLLAPLRAAVLVPLVGVLTVITTWFGLYVTVIAKWTP
Ga0318554_103927331	3300031765	Soil	LPAFLLALPVARLLAPLRTSVLVPLIALLTALSTWFGLYLIVIGRWAP
Ga0318552_103280682	3300031782	Soil	ARLLAPLRASVLVPLIGVLAVATTWFGLYLTVIAKWTP
Ga0318557_100951221	3300031795	Soil	ARLLAPVRVRILVPLVAVLAVAAAWFGLYLTAIVGWAP
Ga0318527_105057941	3300031859	Soil	ALPVARVLARLRTAVLVPLVVVLAAASTWFGLYLTVIARWTP
Ga0306925_122195381	3300031890	Soil	LTLPLARLLARVRTPVLVLLIGVLAAASTWFGLYLLAIVGWAP
Ga0318520_106332672	3300031897	Soil	ILPAFLLALPVARLLAPLRTSVLVPLIAVLTALSTWFGLYLIVIGRWAP
Ga0306921_110358541	3300031912	Soil	VARLLAPLRTSVLVPLIVVLTIASTWFGLYLLVIARLAS
Ga0308174_109632512	3300031939	Soil	VIMTFATSANWISSKPRFVLPAMLLALPVARLLAPLRTSVLVPLVGVLAVAATWFGLYLTIIARWTP
Ga0308174_113306601	3300031939	Soil	MTFATSANWISSKPRFVLPAMLLALPVARLLAPLRTAALVPLVGVLAVAATWFGCT
Ga0310910_107578381	3300031946	Soil	VGVLAFTTSATWLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVVLTLGSTWIGVYLLVIARWAS
Ga0318513_101970031	3300032065	Soil	LLALPVARVLARLRTAVLVPLVVVLAAASTWFGLYLTVIARWTP
Ga0318524_101581902	3300032067	Soil	FLLALPVARLLAPLRTSVLVPLIAVLTALSTWFGLYLIVIGRWAP
Ga0318525_102220931	3300032089	Soil	VARLLARLRTVVLVPLVVVLVAASTWFGLYLTVIARWTP
Ga0318518_106716121	3300032090	Soil	VVVAVMAFTSSANWVSSKPRFFLPAVLLALPLARLLASLRTSVLVPLIVVLTVLSTWVGVYLAVIAGWAP
Ga0306920_1019395461	3300032261	Soil	PRYFLPAILLALPVARLLAPLRTSILVPLIIVLTLASTWIGVYLLVIARLAS
Ga0335085_119500382	3300032770	Soil	YLLPAVLLALPVARLLAPLRTSVLVPLIVVLTLASTWFGLYLLVIARFAS
Ga0335080_121832611	3300032828	Soil	LARLLAPLRTRVLVPLVGVLVVASTWFGLYITVIARWTP
Ga0335081_102739601	3300032892	Soil	LARLLAPVRTSVLVPLIGVLAAATTWFGLYLTVIAKWTP
Ga0334840_062574_3_137	3300033824	Soil	LLALPVARLLAPLRTSVLVPLIVVFTLASTWIGVYLLVIAGWAS
Ga0370483_0037591_1338_1493	3300034124	Untreated Peat Soil	AFPAARLLLALPVARLLAPLRIAVLAGLIVVLTVLSTWFGLYLHLVARWVP
Ga0370515_0072117_1329_1502	3300034163	Untreated Peat Soil	WLSEKPRYFLPAVLLALPVARLLAPLRTSVLVPLIVVFTLVSTWIGVYLLVIAGWAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049254

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences