NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049251

Metagenome / Metatranscriptome Family F049251

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049251
Family Type Metagenome / Metatranscriptome
Number of Sequences 147
Average Sequence Length 76 residues
Representative Sequence MRLLKLAAFLSLWVVFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGY
Number of Associated Samples 136
Number of Associated Scaffolds 147

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.30 %
% of genes near scaffold ends (potentially truncated) 95.92 %
% of genes from short scaffolds (< 2000 bps) 91.84 %
Associated GOLD sequencing projects 132
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (93.197 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(10.204 % of family members)
Environment Ontology (ENVO) Unclassified
(37.415 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.340 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 49.00%    β-sheet: 0.00%    Coil/Unstructured: 51.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 147 Family Scaffolds
PF13444Acetyltransf_5 29.25
PF00378ECH_1 7.48
PF01553Acyltransferase 3.40
PF02502LacAB_rpiB 2.04
PF00691OmpA 1.36
PF08240ADH_N 0.68
PF01728FtsJ 0.68
PF01799Fer2_2 0.68
PF01041DegT_DnrJ_EryC1 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 147 Family Scaffolds
COG0698Ribose 5-phosphate isomerase RpiBCarbohydrate transport and metabolism [G] 2.04
COG029323S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJTranslation, ribosomal structure and biogenesis [J] 0.68
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.68
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.68
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.68
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.68
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.68
COG1189Predicted rRNA methylase YqxC, contains S4 and FtsJ domainsTranslation, ribosomal structure and biogenesis [J] 0.68
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.68


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.20 %
UnclassifiedrootN/A6.80 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886013|SwBSRL2_contig_13233677Not Available925Open in IMG/M
2209111006|2214769107All Organisms → cellular organisms → Bacteria804Open in IMG/M
2209111006|2214809680All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium688Open in IMG/M
3300000041|ARcpr5oldR_c003692All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1350Open in IMG/M
3300000559|F14TC_106001413All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium553Open in IMG/M
3300000955|JGI1027J12803_101401618Not Available606Open in IMG/M
3300002530|C687J35503_10172865All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300003321|soilH1_10001721All Organisms → cellular organisms → Bacteria8136Open in IMG/M
3300003324|soilH2_10386580All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300003997|Ga0055466_10121236All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300004463|Ga0063356_101743668All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300004463|Ga0063356_105882449All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300004479|Ga0062595_100351153All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1027Open in IMG/M
3300004800|Ga0058861_10700173All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300005164|Ga0066815_10100063All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300005178|Ga0066688_10394753All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300005213|Ga0068998_10083659All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300005276|Ga0065717_1012024Not Available582Open in IMG/M
3300005294|Ga0065705_10330745All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300005295|Ga0065707_11082071All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300005330|Ga0070690_101172105All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium612Open in IMG/M
3300005330|Ga0070690_101569928All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005334|Ga0068869_101344650All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300005345|Ga0070692_11107117All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300005354|Ga0070675_102072547Not Available524Open in IMG/M
3300005355|Ga0070671_101098672All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300005365|Ga0070688_100302575All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300005366|Ga0070659_101379924All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium626Open in IMG/M
3300005437|Ga0070710_11308966All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus taiwanensis539Open in IMG/M
3300005440|Ga0070705_101302612All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium602Open in IMG/M
3300005444|Ga0070694_100796228All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300005467|Ga0070706_101383268All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300005526|Ga0073909_10009204All Organisms → cellular organisms → Bacteria2969Open in IMG/M
3300005549|Ga0070704_100860813All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300005549|Ga0070704_101489537All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium622Open in IMG/M
3300005713|Ga0066905_101332618All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005719|Ga0068861_101641419All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300005829|Ga0074479_10933790All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300006049|Ga0075417_10441353All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300006163|Ga0070715_10545003All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300006173|Ga0070716_100192083All Organisms → cellular organisms → Bacteria → Proteobacteria1350Open in IMG/M
3300006175|Ga0070712_100876703All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium773Open in IMG/M
3300006358|Ga0068871_100256919All Organisms → cellular organisms → Bacteria1523Open in IMG/M
3300006846|Ga0075430_100516196All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300006854|Ga0075425_101513206All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300006854|Ga0075425_101559946All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300006871|Ga0075434_100216652All Organisms → cellular organisms → Bacteria1934Open in IMG/M
3300006930|Ga0079303_10510442All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300009100|Ga0075418_13081988All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300009147|Ga0114129_10091607All Organisms → cellular organisms → Bacteria4211Open in IMG/M
3300009148|Ga0105243_10284540All Organisms → cellular organisms → Bacteria1491Open in IMG/M
3300009176|Ga0105242_10076858All Organisms → cellular organisms → Bacteria2784Open in IMG/M
3300009553|Ga0105249_10710554All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300009609|Ga0105347_1204766All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium795Open in IMG/M
3300010046|Ga0126384_11968470All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300010154|Ga0127503_11119471Not Available563Open in IMG/M
3300010154|Ga0127503_11120972All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300010304|Ga0134088_10323197All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300010371|Ga0134125_10129388All Organisms → cellular organisms → Bacteria2810Open in IMG/M
3300010373|Ga0134128_10207316All Organisms → cellular organisms → Bacteria2205Open in IMG/M
3300010397|Ga0134124_12293531All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium580Open in IMG/M
3300010399|Ga0134127_10624213All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300010400|Ga0134122_10415478All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1193Open in IMG/M
3300012202|Ga0137363_11625488All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium538Open in IMG/M
3300012362|Ga0137361_11598084Not Available573Open in IMG/M
3300012477|Ga0157336_1012615All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium672Open in IMG/M
3300012477|Ga0157336_1021761All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300012480|Ga0157346_1032661Not Available514Open in IMG/M
3300012486|Ga0157331_1026505All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300012498|Ga0157345_1040113All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium560Open in IMG/M
3300012503|Ga0157313_1021030Not Available666Open in IMG/M
3300012515|Ga0157338_1036214All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300012517|Ga0157354_1038025All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium644Open in IMG/M
3300012519|Ga0157352_1053146All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300012896|Ga0157303_10025132All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300012923|Ga0137359_11199208All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium647Open in IMG/M
3300012929|Ga0137404_10767156All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300012955|Ga0164298_10477143All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300012987|Ga0164307_10114555All Organisms → cellular organisms → Bacteria1716Open in IMG/M
3300013296|Ga0157374_10293216All Organisms → cellular organisms → Bacteria1608Open in IMG/M
3300013297|Ga0157378_11643931All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium689Open in IMG/M
3300014296|Ga0075344_1003012All Organisms → cellular organisms → Bacteria1957Open in IMG/M
3300014304|Ga0075340_1055180All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300014314|Ga0075316_1029952All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1110Open in IMG/M
3300014326|Ga0157380_11872774All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium660Open in IMG/M
3300014870|Ga0180080_1017526All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300015077|Ga0173483_10192501All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300015261|Ga0182006_1188940All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300015372|Ga0132256_100930707All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium985Open in IMG/M
3300015372|Ga0132256_102333018All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300015373|Ga0132257_100660764All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1296Open in IMG/M
3300016319|Ga0182033_10794798All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300016357|Ga0182032_11515906All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium582Open in IMG/M
3300017936|Ga0187821_10324756All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300018027|Ga0184605_10008045All Organisms → cellular organisms → Bacteria3937Open in IMG/M
3300018031|Ga0184634_10426180All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium602Open in IMG/M
3300018054|Ga0184621_10096082All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300018061|Ga0184619_10082313All Organisms → cellular organisms → Bacteria1430Open in IMG/M
3300018084|Ga0184629_10259381All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300018422|Ga0190265_12616775All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium602Open in IMG/M
3300019362|Ga0173479_10573521All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium585Open in IMG/M
3300020004|Ga0193755_1137405All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300021081|Ga0210379_10045807All Organisms → cellular organisms → Bacteria1729Open in IMG/M
3300022226|Ga0224512_10548986All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300022694|Ga0222623_10086139All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300025310|Ga0209172_10507775All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium553Open in IMG/M
3300025322|Ga0209641_10416715All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300025324|Ga0209640_10430230All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300025326|Ga0209342_10550670All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300025327|Ga0209751_10237531All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1552Open in IMG/M
3300025327|Ga0209751_10561071All Organisms → cellular organisms → Bacteria924Open in IMG/M
3300025909|Ga0207705_11119378All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300025925|Ga0207650_10042739All Organisms → cellular organisms → Bacteria3325Open in IMG/M
3300025926|Ga0207659_10244849All Organisms → cellular organisms → Bacteria1452Open in IMG/M
3300025937|Ga0207669_11283971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium622Open in IMG/M
3300025945|Ga0207679_11029656All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium755Open in IMG/M
3300025949|Ga0207667_10259992All Organisms → cellular organisms → Bacteria1775Open in IMG/M
3300025960|Ga0207651_10853831All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium809Open in IMG/M
3300025986|Ga0207658_11911172All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300026023|Ga0207677_10350916All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300026067|Ga0207678_11343081All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium632Open in IMG/M
3300026298|Ga0209236_1090019All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300026905|Ga0207516_1014409All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300027873|Ga0209814_10392272All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300028145|Ga0247663_1098675All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300028380|Ga0268265_11337983All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300028381|Ga0268264_12701463All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium500Open in IMG/M
3300028536|Ga0137415_10908639All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium691Open in IMG/M
3300028802|Ga0307503_10208628All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium930Open in IMG/M
3300028803|Ga0307281_10305404All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium594Open in IMG/M
3300028828|Ga0307312_10067143All Organisms → cellular organisms → Bacteria2170Open in IMG/M
3300028878|Ga0307278_10216666All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300031538|Ga0310888_11013309All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031852|Ga0307410_12096782All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium505Open in IMG/M
3300032005|Ga0307411_10138629All Organisms → cellular organisms → Bacteria1790Open in IMG/M
3300032012|Ga0310902_10631138Not Available715Open in IMG/M
3300032076|Ga0306924_11659378All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium671Open in IMG/M
3300032174|Ga0307470_10157760All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1397Open in IMG/M
3300032174|Ga0307470_10996826All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300032205|Ga0307472_101531297All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium652Open in IMG/M
3300032421|Ga0310812_10314600All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300033412|Ga0310810_11163572All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300033433|Ga0326726_10166608All Organisms → cellular organisms → Bacteria2018Open in IMG/M
3300033433|Ga0326726_12388098All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium513Open in IMG/M
3300033475|Ga0310811_10017075All Organisms → cellular organisms → Bacteria → Proteobacteria9511Open in IMG/M
3300034115|Ga0364945_0060686All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1069Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.44%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil4.08%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere4.08%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.40%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.40%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.40%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.40%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.72%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere2.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.04%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.04%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.04%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.04%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.04%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.04%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.36%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.36%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.36%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil1.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.36%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil1.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.36%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.36%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.36%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.36%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.36%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.68%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.68%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.68%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.68%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.68%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.68%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.68%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.68%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.68%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.68%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
2209111006Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0Host-AssociatedOpen in IMG/M
3300000041Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphereHost-AssociatedOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002530Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_3EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004800Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005213Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2EnvironmentalOpen in IMG/M
3300005276Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012477Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610Host-AssociatedOpen in IMG/M
3300012480Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610Host-AssociatedOpen in IMG/M
3300012486Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510EnvironmentalOpen in IMG/M
3300012498Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410Host-AssociatedOpen in IMG/M
3300012503Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_RHost-AssociatedOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012517Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610EnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014296Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300014304Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1EnvironmentalOpen in IMG/M
3300014314Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014870Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT560_16_10DEnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300022226Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025322Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A4-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028145Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0192.000038902162886013Switchgrass RhizosphereMRWVKLIALLFLWAGFFVFFALVHLWISMLGLPNRWQIVNRLTQTFAFLIRTILNIKVTVVGDVGQVKKGGCLIISNH
22137875172209111006Arabidopsis RhizosphereMRLLKFAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIAGDAGQLERGGYVVIANHVSYVDGIVLGSIFPIVFVSKRE
22138420392209111006Arabidopsis RhizosphereMRWVKLAALLSLWAGFFVCIALVHLWISVLGLPNRWKIISRLQHGFTFLIRIILNIKLT
ARcpr5oldR_00369213300000041Arabidopsis RhizosphereMRWVKLAALLSLWAGFFVCIALVHLWISVLGLPNRWKIISRLQHGFTFLIRIILNIKLTVVGDAGQVER
F14TC_10600141313300000559SoilMRWVKLAALLSLWAGFFVCIALVHLWISVLGLPNRWKIISRLQHGFTFLIRIILNINVSVVGDAGQVERGGYLIISNHLSYV
JGI1027J12803_10140161813300000955SoilMRWVKLIALLFLWAGFFVFFALVHLWISVLGLPNRWQTVNRLTQTFAFLIRTIL
C687J35503_1017286513300002530SoilMRWLKLTAFLSLWAFFFGLVALVHLWXSILGLPNRWKIISRLARSFTLLLRLILKIKVTVQGEEGQLERGGFVIIANHMS
soilH1_1000172163300003321Sugarcane Root And Bulk SoilMRLLKLAAFLSLWAVFFALVGIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTIAGDEGQLER
soilH2_1038658033300003324Sugarcane Root And Bulk SoilMRLLKLAAFISLWTFFFALVAIVHVWISVLAIPNRWKIISRLNRNFTLLVRLILNIKVTVSGDEGQLERGGYVIIANH
Ga0055466_1012123623300003997Natural And Restored WetlandsMRLLKLAAFLSLWAFFFGLVALVHIWVSILGLPNRWKIISRLNRNFTLLMRLIINIKVTVAGDEGQME
Ga0063356_10174366823300004463Arabidopsis Thaliana RhizosphereMKRLLKLSAFLSLWVFFFGLVNMVHLWISVLGIPNRWKIISRINRVYTLLLRLILNIKVTISGDEGQLER
Ga0063356_10588244923300004463Arabidopsis Thaliana RhizosphereMRLLKLAAFLSLWAVFFALVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVRGDEGQLERG
Ga0062595_10035115313300004479SoilMRWVKLIALLFLWAGFFVFFALVHLWISMLRLPNRWQIVNRLTQTFAFLIRTILNIKVTVVGDVGQVEKGGCLIISNHFSYVDGFVLISIFPMGF
Ga0058861_1070017313300004800Host-AssociatedMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLER
Ga0066815_1010006313300005164SoilMRLLKLAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIAGDEGQLERGGYVIIANHVSYVDGIVLGS
Ga0066688_1039475323300005178SoilMRWVKTSALLSLWAFFFGLVALAHLWISALRLPNRWKIISRLTRSFIFLLRMILNIKVT
Ga0068998_1008365923300005213Natural And Restored WetlandsMRLLKLTAFLSLWVFFFALVGLVHLWISILSLPNRWKIVSRLNRAYTLLMRTILNIKVTVDGDEGHLERGGYVIIANHM
Ga0065717_101202423300005276Arabidopsis RhizosphereMRWLKLAALLSVWAGFFVCVILVHLWISLLGLPNRWQIISRLNHSIAFLIRIILNIK
Ga0065705_1033074523300005294Switchgrass RhizosphereMRLLKLAAFLSLWAFFFALVATVHLWISILGLPFRWKIVSRLNRNFTLLLRLILGIKVTVTGDEGQLERGG*
Ga0065707_1108207113300005295Switchgrass RhizosphereMRLLKLAAFLSLWAFFFALVATVHLWISILGLPFRWKIVSRLNRNFTLLLRLILGIKVTVTGDEGQLERGGYVIIAN
Ga0070690_10117210513300005330Switchgrass RhizosphereMRWVKLAALLSVWAGFFVCVALVHLWISVLGLPNRWQIISRIQHSFTLLIRIILNIKVT
Ga0070690_10156992823300005330Switchgrass RhizosphereMRLLKLAAFLSLWVVFFALVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIRVTVTGDEGQLERG
Ga0068869_10134465013300005334Miscanthus RhizosphereMRLLKLTAFLSLWVFFFALVGMVHLWVSVLGLPNRWKVISRLNRNFTLLLRMILNIKITVTGDEGQLERGGYVI
Ga0070692_1110711723300005345Corn, Switchgrass And Miscanthus RhizosphereMRLLKLAAFLSLWAFFFALVATVHLWISILGLPFRWKIVSRLNRNFTLLLRLILGIKVTVAGDEGQLERGGYVIIANHMSYVDG
Ga0070675_10207254713300005354Miscanthus RhizosphereMRWVKLIALLFLWAGFFVFFALVHLWISMLGLPNRWQIVNRLTQTFAFLIRTILN
Ga0070671_10109867213300005355Switchgrass RhizosphereVRWLKLIAFLSLWLVFFVLVGMTHLWISVLRLPHRWKIISRIARAYTFLVRVILNVKVTILGDESNLEQGGYVIIANHVSYVDGM
Ga0070688_10030257523300005365Switchgrass RhizosphereMRLLKLTAFLSLWVFFFALVGMVHLWVSVLGLPNRWKVISRLNRNFTLLLRMILNIKITVTGDEGQLERGGYVIIANHVSYV
Ga0070659_10137992413300005366Corn RhizosphereMRWVKLIALLFLWAGFFVFFALVHLWISMLGLPNRWQIVNRLTQTFAFLIRTILNIKVTVVGDVGQVERGGYLIISNHLSYV
Ga0070710_1130896613300005437Corn, Switchgrass And Miscanthus RhizosphereMRWVKLAALLSVWAGFFVCVALVHLWISMLGLPNRWQIISRLNRSIAFLIRIILNIKVTVVGDVGQVERGGYLIISNHLSYVDGFVLVSIFPMVFITYGEVKKW
Ga0070705_10130261213300005440Corn, Switchgrass And Miscanthus RhizosphereMRWVKLIALLFLWAGFFVFFALVHLWISMLGLPNRWQIVNRLTQTFAFLIRTILNIKVTVVGDVGQVEKGGCLIISNHFSYVDGFV
Ga0070694_10079622813300005444Corn, Switchgrass And Miscanthus RhizosphereMRLLKLAAFLSLWAFFFALVATVHLWISILGLPFRWKIVSRLNRNFTLLLRLILGIKVTVTGDEGQLERGGYVIIANHVSYVDG
Ga0070706_10138326823300005467Corn, Switchgrass And Miscanthus RhizosphereMRLLKLTAFLSLWAVFFVLVAAVHLWVSILGLPNRWKIISRLNRNYTLLLRLILNIKVSV
Ga0073909_1000920453300005526Surface SoilMRWVKLAALLSLWAGFFVCIALVHLWISVLGLPNRWKIISRLNRSIAFLIRIILNIKVTVVGDVGQVE
Ga0070704_10086081313300005549Corn, Switchgrass And Miscanthus RhizosphereMRLLKLTAFLSLWAFFFGLVALVHLWISILGLPNRWKIVSRLNRAYTLLARLILNIKVTVSGDEGQLERGGYVIIANH
Ga0070704_10148953723300005549Corn, Switchgrass And Miscanthus RhizosphereMRWVKLAALLSLWAGFFGCVALVHLWISVLGLPNRWQIISRIQHSFTLLIRIILNIKVT
Ga0066905_10133261823300005713Tropical Forest SoilMMRLLKLTAFLSLWVFFFGLVALVHVWVSILALPNRWKIISRLNRNFTLLLRMILNIKV
Ga0068861_10164141923300005719Switchgrass RhizosphereMRLLKFAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTI
Ga0074479_1093379023300005829Sediment (Intertidal)MKRLLKLTALLSVWALFFGLVAMMHLWVSVLGMPKRWKIVSRVNRIYTLLLRSILNIRVAIAGDEGKLERGGYILITIHVGYIDGIVFASIFPDRLRV*
Ga0075417_1044135323300006049Populus RhizosphereMRLLKLAAFLSLWVFFFALVATVHLWISILGLPNRWKIISRLNRNFTLLLRLILNIKVTVAGDEGQMERGGYVI
Ga0070715_1054500313300006163Corn, Switchgrass And Miscanthus RhizosphereMRLLKLAAFLSLWVVFFVLVVIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIAGDEGQLERGGYVI
Ga0070716_10019208323300006173Corn, Switchgrass And Miscanthus RhizosphereMRWFKLAALLSLWACFFGGVILVHFWISMLGLPDRWKIISRSTHSFTFLLTKILNIKVTVVGDEGQLERDGYVIISNHVS*
Ga0070712_10087670333300006175Corn, Switchgrass And Miscanthus RhizosphereMRWLKLAALLSVWAGFFVCVALVHLWISMLGLPNRWQIISRLNRSIAFLIRIILNIKVTV
Ga0068871_10025691913300006358Miscanthus RhizosphereMRLLKLAAFLSLWVIFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGY
Ga0075430_10051619613300006846Populus RhizosphereMRLLKLTAFISLWTFFFALVATVHLWISILALPNRWKIISRLNRNFTLLVRLILNVKVTVSGDEGQLERGGYVIIANHVSY
Ga0075425_10151320623300006854Populus RhizosphereMRLLKLTAFLSLWAVFFVLVAAVHLWVSILGLPNRWKIISRLNRNYTLLLRLILNIKVSVVGDEGQLERGGYVIIANHVSYV
Ga0075425_10155994623300006854Populus RhizosphereMRLLKFAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIAGDAGQLERGGYVVIANHVSYV
Ga0075434_10021665233300006871Populus RhizosphereMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERG
Ga0079303_1051044213300006930Deep SubsurfaceMKRLLKLTAFLSLWAIFFGLVGMVHLWISVLGMPNRWKIISRVNRIYTLLLRSILNIKVTVTGDEGQLERGGYVI
Ga0105098_1076478613300009081Freshwater SedimentMRWVKLSAILSLWLLFFGVVTLAHLWISVLKLPNRWKIISRPIRSFNFLLSAILNIKVTVKGDAGQL
Ga0075418_1308198823300009100Populus RhizosphereMRLLKLAAFLSLWVVFFGLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIRVTVTGDEGQLERGGYVIIA
Ga0114129_1009160763300009147Populus RhizosphereMRLLRLAAFLSLWVVFFALVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVTGDEGQLERGGYVIIANHVSYVD
Ga0105243_1028454013300009148Miscanthus RhizosphereMRLLKLAAFLSLWVIFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYIVIANHVSYVD
Ga0105242_1007685843300009176Miscanthus RhizosphereVRWLKLIAFLSLWLVFFVLVGMTHLWISVLGLPHRWKIISRIARAYTFLVRVILNVKVTILGDESNLEQGGYVIIANHV
Ga0105249_1071055413300009553Switchgrass RhizosphereMRLLKLTAFLSLWAFFFALVALVHLWISILGLPNRWKIVSRLNRAYTLLARLILNIKVTVSGDEGQLER
Ga0105347_120476613300009609SoilMRLLKLTAFLSLWAFFFALVALVHLWISILGLPNRWKIVSRLNRAYTLLLRLILNIKVTVSGDEGQLERGGYVIIANHTSYVDGI
Ga0126384_1196847013300010046Tropical Forest SoilMMRLLKLTAFLSLWVFFFGLVARVHVWVSILALPNRWKIISRLNRNFTLLVRLILNIKVT
Ga0127503_1111947113300010154SoilMRWVKLAALLSLWAGFFVCVALVHLWISMLGLSDRWKIISRLTHSFTFLIRIILNIKVTVVGDVGQLE
Ga0127503_1112097213300010154SoilMRWLRLAAFLSLWACFFGLVALAHLWISVLRLPHRWKIISRLSRSFTFLVRTILNIKVTVVGEER
Ga0134088_1032319723300010304Grasslands SoilMRLLKLTAFLSLWAFFFGLVATVHLWISILVLPNRWKIISRLNRNFTLLLRLILNIKVIVAGDEGQM
Ga0134125_1012938813300010371Terrestrial SoilMRLLKLAAFLSLWVVFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGY
Ga0134128_1020731613300010373Terrestrial SoilMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYVIIANH
Ga0134124_1229353113300010397Terrestrial SoilMRLLKLTAFLSLWVFFFALVGMVHLWVSILGLPNRWKVISRLNRNFTLLLRMILNIKVAVTGDEGQLERGGYVIIANHVSYVDGIVLGSIFPIL
Ga0134127_1062421313300010399Terrestrial SoilMRLLKLAAFLSLWAFFFALVATVHLWISILGLPFRWKIVSRLNRNFTLLLRLILGIKVTVTGDEGQLERGGYVIIANHV
Ga0134122_1041547823300010400Terrestrial SoilMRWLKLAALLSLWAFFFGLIALAHVWISALRIPNRWKIVSRLSRSFVLLMRMILNIRITVIGDEGHLERGGYVIISNHMSYVDGIVLGSLF
Ga0137363_1162548813300012202Vadose Zone SoilMRWVKLAALLSLWACFFGCVTLVHLWISMLGLPNRWKTISRLTHSFTFLIRIILNIKVTVVGDMGQLERGGYLIISNHVS
Ga0137361_1159808413300012362Vadose Zone SoilMRWVKLAALLSLWACFFGGVTLVHFWISMLGLPDRWKIISRSTHSFTFLLTKILNIKVTVVGDEG
Ga0157336_101261513300012477Arabidopsis RhizosphereMRWLKLAALLSVWAGFFVCVILVHLWISLLGLPNRWQIISRLNRSIALLIRIILNIKVTVVGDVGQVKKGGCLIISNHFSYVDGFVLISIFPMGFITY
Ga0157336_102176113300012477Arabidopsis RhizosphereMRLLKLAAFLSLWAVFFALVAIVHLWVSILGLPNRWKIISRLNRNYTLLLRLILNIKVTVTGDEGQLERGGYVIIANHVSYV
Ga0157346_103266113300012480Arabidopsis RhizosphereMRWVKLIALLFLWAGFFVFFALVHLWISMLGLPNRWQIVNRLTQTFAFLIRTILNIKVTVVGDVGQV
Ga0157331_102650513300012486SoilMRLLKLAAFLSLWVVFFALVTIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIRVSVTGDEGQLERGGYVIIANHVSYVDGI
Ga0157345_104011313300012498Arabidopsis RhizosphereMRWVKLIALLFLWAGFFVFFALVHLWISMLGLPNRWQIVNRLTQTFAFLIRTILNIKVTVVGDVGQVERGGYLIISNHFSYVDGFVLISIF
Ga0157313_102103013300012503Arabidopsis RhizosphereMRWVKLIALLFLWAGFFVFFALVHLWISMLGLPNRWQIVNRLTQAFAFLIRTILNIKVTVVGDMGQVEK
Ga0157338_103621413300012515Arabidopsis RhizosphereMRLLKFAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIAGDAGQL
Ga0157354_103802513300012517Unplanted SoilMRLLKFAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIASDAGQLERGGYVIIANHVSYVDGIVLGSIFPIVFV
Ga0157352_105314613300012519Unplanted SoilMRLLKLAAFLSLWGVFFGLVAIVHLWVWVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVTGDEGQLERGG
Ga0157303_1002513213300012896SoilMRLLKLAAFLSLWVIFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERG
Ga0137359_1119920813300012923Vadose Zone SoilMRLLKLAAFLSLWVVFFFLVAIVHLWISILGLPNRWKVISRLNRNYTLLLRLILNIKVTIAGDEGQLERGGYVIIANHVSYVDGIVLGS
Ga0137404_1076715613300012929Vadose Zone SoilMRLLKLAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIAGDEGQ
Ga0164298_1047714323300012955SoilMRLLKLAAFLSLWVVFFALVTIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIRVSVTGDEG
Ga0164307_1011455533300012987SoilMRLLKLAAFLSLWVVFFALVTIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYVIIANHVSYVDGI
Ga0157374_1029321613300013296Miscanthus RhizosphereMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYVIIANHVSYVD
Ga0157378_1164393113300013297Miscanthus RhizosphereMRWLKLAALLSVWAGFFVCVILVHLWISVLGLPNRWQIISRIQHSFTLLIRIILNIKVTVVGDVGQVERGGYLIISNHLSYVDGFVLGSIFPVVFTTDGEFKK
Ga0075344_100301233300014296Natural And Restored WetlandsMKRLLKLTAFLSLWAIFFGLVGMVHLWISVLGMPNRWKIISRVNRIYTLLLRSILNIKVTVAGD
Ga0075340_105518023300014304Natural And Restored WetlandsMRPLKLIAFLSMWVFYFAVVGLAHLWISILALPNRWKIVSWLNRSYTLLLRMILNIKVTVDGAEVHLERGGYVIIAN
Ga0075316_102995223300014314Natural And Restored WetlandsMRLLKLAAFVSLWAFFFALVAVVHLWVSVLALPNRWKIISRLNRNFTLLVRLILNIKITVSGDDGQLERGGYVIIANHVSYVDGIVLGSIFPILFVS
Ga0157380_1187277423300014326Switchgrass RhizosphereMRLLKFAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIASDAGQLERGGYVIIANHVSYVDGIVLG
Ga0180080_101752623300014870SoilMRLLKLTAYLSLWAFFFGLVATVHLWTSVLGLPNRWKIISRLNRNFTLLMRVILNIKVTVEGDEGQLERG
Ga0173483_1019250113300015077SoilMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKVISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYVIIANHVSY
Ga0182006_118894023300015261RhizosphereMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGMPNRWKIISRLNRNYTLLLRLILNIKVT
Ga0132256_10093070713300015372Arabidopsis RhizosphereMRWLKLAALLSVWAGFFVCVILVHLWISVLGLPNRWQIISRIQHSFTLLIRIILNIKVTVVGDVGQVERGGYLIISNHLSYVDGFVLGSIFPVVF
Ga0132256_10233301823300015372Arabidopsis RhizosphereMRLLKLAAFLSLWVVFFGLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIRVTVTGDEGQLERG
Ga0132257_10066076423300015373Arabidopsis RhizosphereMRWLKLAALLSVWAGFFVCVILVHLWISLLGLPNRWQIISRLNHSIAFLIRIILNIKVTV
Ga0182033_1079479823300016319SoilMRLLKLAAFLSLWTVFFCLVAIVHVWVSVLGLPNRWKIISRLNRNYTLLVRLILNIKVTVTGDE
Ga0182032_1151590623300016357SoilMRLLKLAAFLSLWTVFFCLVAIVHVWVSVLGLPNRWKIISRLNRNYTLLVRLILNIKVTVTGDEGPLERGGYVIIANHVSYVDGIVLGSIF
Ga0187821_1032475613300017936Freshwater SedimentMRLLKLTAFLSLWGFFFALVVTVHLWISILGLPNRWKIISRLNRNFTLLMRLILNIKVT
Ga0184605_1000804513300018027Groundwater SedimentMRLLKLAAFLSLWAVFFGLVVTVHLWMSILVLPNRWKIISRLNRNFTLLLRMILNIKVTVAGDEGQME
Ga0184634_1042618013300018031Groundwater SedimentMRLLKLTAYFSLWAFFFGLVVTVHLWISVLGLPNRWKIISRLNRNFTLLMRVILNIKVTVEGDEGQLERGGYVIIANHMSYVDGI
Ga0184621_1009608223300018054Groundwater SedimentMRLLKLTAFLSLWVFFVGLVAMVHLWVSILGLPNRWKIISRLNRNFTLLLRLILNIKVTVTGDEGQME
Ga0184619_1008231333300018061Groundwater SedimentMRLLKLAAFLSLWAVFFGLVVTVHLWMSILVLPNRWKIISRLNRNFTLLLRMILNIKVTVAGDEGQMERGGYVIIANHVSYVDGIVLGSIFP
Ga0184629_1025938113300018084Groundwater SedimentMRWLKLTALFSLWGFFFALVAFVHLWISILALPNRWKIISRLSRSFTLLLRLILNIKVTVQGDE
Ga0190265_1261677513300018422SoilMRLLKLAAFISLWTFFFALVATVHLWVSILALPNRWKIISRLNRNFTLLVRLILNIKVTVSGDEGQLERGGYVIIANHVSYVDGI
Ga0173479_1057352113300019362SoilMRWVKLAALLSVWAGFFVCVALVHLWISVLGLPNRWQIISRIQHSFTLLIRIILNIKVTVVGDVGQVERGGYLIISNHLSYVDGFVLISIF
Ga0193755_113740523300020004SoilMRLLKLAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIAGDEGQL
Ga0210379_1004580713300021081Groundwater SedimentMRWLKLTALFSLWGVFFALVAFVHLWISILGLPNRWKIISRLTRSFTLLLRLILNIKVTVEGEEGQLERGGFVIIANHVSYVDGIILG
Ga0224512_1054898623300022226SedimentMRWLRLAAFFSIWAFFFALVALVHVWVTVLRLPNRWKIISRFTRNFTLLLRLVLNVKVTVVGDEGQLER
Ga0222623_1008613913300022694Groundwater SedimentMRLLKLAAFLSLWAVFFGLVATVHLWMSILVLPNRWKIISRLNRNFTLLLRMILNIKVTVAGDEGQME
Ga0209172_1050777513300025310Hot Spring SedimentMRWLKLTAFLSLWALFFALVVVSHLWIGVLGLPNRWKIISRLARSFTLLLRSILNIKVTVAGDEGQLERGGYVIISNHDSYVDGI
Ga0209641_1041671523300025322SoilMRWLKLTAFLSLWAFFFGLVALVHLWVSILGLPNRWKIISRLARSFTLLLRLILKIKVTVQGEEGQLE
Ga0209640_1043023023300025324SoilMRLLKLTAFLSLWVFFFALVGLAHLWISILGLPNRWKIVSRLNRTYTLLLRAILNIKVTVDGDVVHL
Ga0209342_1055067023300025326SoilMRWLKLTAFLSLWAFFFGLVALVHLWVSILGLPNRWKIISRLARSFTLLLRLILKIKVT
Ga0209751_1023753133300025327SoilMRWLKFTALFSLWGFFFALVAFVHLWISILGLPNRWKIISRLTRSFTLLLRLILKIKVTVQGDEGQLER
Ga0209751_1056107123300025327SoilMRWLKLTAFLSLWAFFFGLVALVHLWVSILGLPNRWKIISRLARSFTLLLRLILKIKV
Ga0207705_1111937813300025909Corn RhizosphereMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYV
Ga0207650_1004273913300025925Switchgrass RhizosphereMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGY
Ga0207659_1024484913300025926Miscanthus RhizosphereMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGEYVIIANHVSYV
Ga0207669_1128397113300025937Miscanthus RhizosphereMRWVKLAALLSLWAGFFVCIALVHLWISVLGLPNRWKIISRLQHGFTFLIRIILNIKLTVVGDAGQVERGGYLIISNHLS
Ga0207679_1102965623300025945Corn RhizosphereMRWLKLAALLSVWAGFFVCVALVHLWISMLGLPNRWQIISRLNRSIAFLIRIILNIKVTVVGDVRQVERG
Ga0207667_1025999213300025949Corn RhizosphereMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYVIIANHVSYVDGI
Ga0207651_1085383123300025960Switchgrass RhizosphereMRWLKLAALLSVWAGFFVCVALVHLWISVLGLPNRWQIISRIQHSFTLLIRIILNIKVTVVGDVGQVERGGYLIISNHLSYVDGFVLGSIFPVVFTTDGEFKKLPVIG
Ga0207658_1191117213300025986Switchgrass RhizosphereMRLLKFAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIAGDEGQLERGGYVVIANHVSYVDGIVLGSIFPIVFVSKREV
Ga0207677_1035091613300026023Miscanthus RhizosphereMRLLKLAAFLSLWVVFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGEYVIIANHVS
Ga0207678_1134308113300026067Corn RhizosphereMRWLKLAALLSVWAGFFVCVALVHLWISMLGLPNRWKIISRLNRSIAFLIRIILNIKVTVVGDVGQVERGGYLIIS
Ga0209236_109001913300026298Grasslands SoilMRLLKLTAFLSLWAFFFGLVATVHLWISILVLPNRWKIISRLNRNFTLLLRLILNIKVIVAGDEGQMERGGYVIIANHVSYVDGIVL
Ga0207516_101440913300026905SoilMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYIII
Ga0209814_1039227223300027873Populus RhizosphereMRLLKLAAFLSLWAFFFGLVATVHLWISILVLPNRWKIISRLNRNFTLLLRLILNIKVIVAGDEGQMERGG
Ga0247663_109867523300028145SoilMRLLKLTAFLSLWAFFFVLVAMVHLWISILALPNRWKIITRLNRNFTLLMRTILNIKVTVEGDEGQLERGG
Ga0268265_1133798323300028380Switchgrass RhizosphereMRLLKLAAFLSLWVIFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYVIIANH
Ga0268264_1270146313300028381Switchgrass RhizosphereMRWVKLAALLSLWAGFFVCIALVHLWISVLGLPNRWKIISRLQHGFTFLIRIILNIKVTVVGDVGQLERGGYLIISNHVSYVDGFVLISIF
Ga0137415_1090863923300028536Vadose Zone SoilMRWVKLAALLSLWAGFFVCIALVHLWISVLGLPNRWKIISRLQHGFTFLIRIILNIKL
Ga0307503_1020862823300028802SoilMRLLKFAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTIAGDAGQLERGGYVVIANHVSYVDGI
Ga0307281_1030540423300028803SoilMRLLKLTAFLSLWVFFFALVGLAHLWISILGLPNRWKIVSRLNRTYTLLLRAILNIKVTVDGDEGHLERGGYVIIANHMSYVDGIVL
Ga0307312_1006714313300028828SoilMRLLKLTAFLSLWAVFFVLVAAVHLWVSILGLPNRWKIISRLNRNYTLLLRLILNIKVSVVGDEGQLERGG
Ga0307278_1021666623300028878SoilMRLLKLAAFLSLWAVFFGLVATVHLWMSILVLPNRWKIISRLNRNFTLLLRMILNIKVTVAGDEGQ
Ga0310888_1101330913300031538SoilMKRLLKLAAFLSLWVFFFGLVALVHLWISVLGMPNRWKIISRINRTYTLLLRSILNIKVTIVGNEGQLERGGYVIIAN
Ga0307410_1209678213300031852RhizosphereMKRLLKLAAFLSLWVFFFGLVALVHLWISVLGMPNRWKIISRINRTYTLLLRSILNIKLTIVGNEGQLERGGYVIIANHVGYID
Ga0307411_1013862933300032005RhizosphereMKRLLKLAAFLSLWVFFFGLVALVHLWISVLGMPNRWKIISRINRTYTLLLRSILNIKLTIVGNEGQLERGGYVIIANHV
Ga0310902_1063113823300032012SoilMRWVKLAALLSVWAGFFVCVILVHLWISVLGLPNRWQIISRIQHSFTLLIRIILNIKVTVVGDV
Ga0306924_1165937813300032076SoilMRLLKLAAFLSLWTVFFFLVAIVHVWVSILGLPNRWKIISRLNRNYTLLVRLILNIKVTVTGDEGPLERGGYVIIANHVSYVDGIVLG
Ga0307470_1015776033300032174Hardwood Forest SoilMRWVKLIALLFLWAGFFVFFALVHLWISMLGLPNRWQIVNRLTQTFAFLIRTILNI
Ga0307470_1099682613300032174Hardwood Forest SoilMRWLRLAAFLSLWACFFGLVALAHLWISVLRLPHRWKIITRLSRSFTFLVRTILNIKVTVVGEERCMESGGCVIICNHVSY
Ga0307472_10153129723300032205Hardwood Forest SoilMRLLKLTAFLSLWAVFFVLVAAVHLWVSILGLPNRWKIISRLNRNYTLLLRLILNIKVSVVGDEGQLERGGYVIIANHVSYVDGIV
Ga0310812_1031460023300032421SoilMRLLKLAAFLSLWAVFFALVGIVHVWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTIAGDEGQLE
Ga0310810_1116357223300033412SoilMRLLKLAAFLSLWVVFFALVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVRGDEGQ
Ga0326726_1016660813300033433Peat SoilLQDAYFKRLGVVDLKGMKCLLKLTAFLSLWALFFGLVAMIRLWVSVLAMPNRWKIVSQVNRIYTLLLRSILNIRITIAGDEGQLERGGYVMIANHVGYI
Ga0326726_1238809823300033433Peat SoilMRWLKLTALFSLWGFFFALVAFVHLWISILGLPNRWKIISRLTRSFTLLLRLILKIKVTVQGDEGQLERGGYVIIANHTSYVDGMV
Ga0310811_1001707543300033475SoilMRLLKLAAFLSLWVMFFVLVAIVHLWISVLGLPNRWKIISRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYIIIANCSR
Ga0364945_0060686_783_10673300034115SedimentMRLLKLAAFLSLWVVFFVLVAIVHLWISILGLPNRWKILSRLNRNYTLLLRLILNIKVTVAGDEGQLERGGYVIIANHVSYVDGIVLGSIFPIVF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.