NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F049169

Metagenome Family F049169

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F049169
Family Type Metagenome
Number of Sequences 147
Average Sequence Length 87 residues
Representative Sequence LTLAEHKALGLNAAWYTFLPDQVLKVSAWSFFQEFKKKDMRAWDEYVQAHPETPFTGGAKLPWDATGMTELSKFEAKYAPKRKRR
Number of Associated Samples 129
Number of Associated Scaffolds 147

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.04 %
% of genes near scaffold ends (potentially truncated) 97.28 %
% of genes from short scaffolds (< 2000 bps) 91.16 %
Associated GOLD sequencing projects 123
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(15.646 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.578 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.10%    β-sheet: 0.00%    Coil/Unstructured: 46.90%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 147 Family Scaffolds
PF03401TctC 57.82
PF13343SBP_bac_6 2.04
PF00982Glyco_transf_20 1.36
PF14376Haem_bd 0.68
PF04392ABC_sub_bind 0.68
PF13714PEP_mutase 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 147 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 57.82
COG0380Trehalose-6-phosphate synthase, GT20 familyCarbohydrate transport and metabolism [G] 1.36
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.68

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000789|JGI1027J11758_12911027All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300000956|JGI10216J12902_102508406All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria652Open in IMG/M
3300000956|JGI10216J12902_103117873All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1147Open in IMG/M
3300003319|soilL2_10015792All Organisms → cellular organisms → Bacteria5973Open in IMG/M
3300003994|Ga0055435_10031601All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1194Open in IMG/M
3300004009|Ga0055437_10140886All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria741Open in IMG/M
3300004013|Ga0055465_10318900All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria538Open in IMG/M
3300004019|Ga0055439_10008526All Organisms → cellular organisms → Bacteria2206Open in IMG/M
3300004025|Ga0055433_10143747All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria574Open in IMG/M
3300004643|Ga0062591_102324962All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria560Open in IMG/M
3300005294|Ga0065705_10985692All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria551Open in IMG/M
3300005328|Ga0070676_11476194All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium523Open in IMG/M
3300005329|Ga0070683_101162962All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria741Open in IMG/M
3300005330|Ga0070690_101679055All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria516Open in IMG/M
3300005345|Ga0070692_10612559All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria722Open in IMG/M
3300005365|Ga0070688_100361410All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1065Open in IMG/M
3300005446|Ga0066686_11117495All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300005467|Ga0070706_102005599All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria524Open in IMG/M
3300005536|Ga0070697_100265566All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1470Open in IMG/M
3300005548|Ga0070665_102084356All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria572Open in IMG/M
3300005549|Ga0070704_101702158All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria583Open in IMG/M
3300005617|Ga0068859_103000270All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria516Open in IMG/M
3300005718|Ga0068866_10237899All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1107Open in IMG/M
3300005829|Ga0074479_11149630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1802Open in IMG/M
3300005841|Ga0068863_102038762All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria584Open in IMG/M
3300005981|Ga0081538_10367791All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium519Open in IMG/M
3300006058|Ga0075432_10607694All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria501Open in IMG/M
3300006173|Ga0070716_100964775All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300006358|Ga0068871_102419953All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria501Open in IMG/M
3300006755|Ga0079222_11562641All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria623Open in IMG/M
3300006845|Ga0075421_100848828All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1047Open in IMG/M
3300006845|Ga0075421_102565851All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria530Open in IMG/M
3300006846|Ga0075430_100725202All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria819Open in IMG/M
3300006847|Ga0075431_100109640All Organisms → cellular organisms → Bacteria2849Open in IMG/M
3300006852|Ga0075433_10222261All Organisms → cellular organisms → Bacteria1677Open in IMG/M
3300006852|Ga0075433_10937280All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria755Open in IMG/M
3300006852|Ga0075433_11092999All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria693Open in IMG/M
3300006853|Ga0075420_100622597All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria931Open in IMG/M
3300006854|Ga0075425_102290570All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria600Open in IMG/M
3300006871|Ga0075434_100105057All Organisms → cellular organisms → Bacteria2834Open in IMG/M
3300006881|Ga0068865_101755693All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria560Open in IMG/M
3300006894|Ga0079215_10075356All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1404Open in IMG/M
3300006904|Ga0075424_101826971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria643Open in IMG/M
3300007004|Ga0079218_10362260All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1214Open in IMG/M
3300009012|Ga0066710_100781531All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1462Open in IMG/M
3300009081|Ga0105098_10673360All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria546Open in IMG/M
3300009111|Ga0115026_10113664All Organisms → cellular organisms → Bacteria → Proteobacteria1677Open in IMG/M
3300009147|Ga0114129_11005337All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1050Open in IMG/M
3300009156|Ga0111538_10061005All Organisms → cellular organisms → Bacteria4811Open in IMG/M
3300009156|Ga0111538_11014167All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1050Open in IMG/M
3300009162|Ga0075423_10162259All Organisms → cellular organisms → Bacteria2346Open in IMG/M
3300009162|Ga0075423_10463673All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1332Open in IMG/M
3300010359|Ga0126376_10463111All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1162Open in IMG/M
3300010376|Ga0126381_100563390All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300010400|Ga0134122_11260489All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria744Open in IMG/M
3300010401|Ga0134121_10213597All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300010403|Ga0134123_10389205All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1274Open in IMG/M
3300010403|Ga0134123_11352860All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria750Open in IMG/M
3300011406|Ga0137454_1083264All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria549Open in IMG/M
3300011409|Ga0137323_1084638All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria701Open in IMG/M
3300011437|Ga0137429_1009632All Organisms → cellular organisms → Bacteria2766Open in IMG/M
3300011437|Ga0137429_1016639All Organisms → cellular organisms → Bacteria2089Open in IMG/M
3300011438|Ga0137451_1241820All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria569Open in IMG/M
3300011442|Ga0137437_1003125All Organisms → cellular organisms → Bacteria5897Open in IMG/M
3300011443|Ga0137457_1159340All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria753Open in IMG/M
3300011444|Ga0137463_1283070All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria611Open in IMG/M
3300011445|Ga0137427_10173571All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria892Open in IMG/M
3300012137|Ga0137346_1039983All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria628Open in IMG/M
3300012206|Ga0137380_10332336All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1357Open in IMG/M
3300012210|Ga0137378_10608124All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1003Open in IMG/M
3300012510|Ga0157316_1067313All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium533Open in IMG/M
3300012944|Ga0137410_10280694All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1314Open in IMG/M
3300013306|Ga0163162_10981785All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria954Open in IMG/M
3300014861|Ga0180061_1038344All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria763Open in IMG/M
3300014873|Ga0180066_1072823All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria697Open in IMG/M
3300015077|Ga0173483_10409593All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria698Open in IMG/M
3300015201|Ga0173478_10532012All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria596Open in IMG/M
3300015372|Ga0132256_101042137All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria933Open in IMG/M
3300015372|Ga0132256_103079994All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria560Open in IMG/M
3300015373|Ga0132257_102575741All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium661Open in IMG/M
3300015374|Ga0132255_101541472All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1006Open in IMG/M
3300015374|Ga0132255_103375752All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium680Open in IMG/M
3300016404|Ga0182037_11845208All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria541Open in IMG/M
3300018027|Ga0184605_10033313All Organisms → cellular organisms → Bacteria2135Open in IMG/M
3300018053|Ga0184626_10120579All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1114Open in IMG/M
3300018066|Ga0184617_1046486All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1090Open in IMG/M
3300018076|Ga0184609_10078358All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1457Open in IMG/M
3300018078|Ga0184612_10225328All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria971Open in IMG/M
3300018422|Ga0190265_12746750All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria588Open in IMG/M
3300018465|Ga0190269_11222400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria592Open in IMG/M
3300019377|Ga0190264_10030154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1961Open in IMG/M
3300019882|Ga0193713_1029625All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1607Open in IMG/M
3300020001|Ga0193731_1075927All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium877Open in IMG/M
3300020004|Ga0193755_1069875All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300020583|Ga0210401_10560198All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300021063|Ga0206227_1109868All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium548Open in IMG/M
3300021081|Ga0210379_10060820All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1522Open in IMG/M
3300021344|Ga0193719_10129137All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1096Open in IMG/M
3300022756|Ga0222622_11332411All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria528Open in IMG/M
3300025315|Ga0207697_10079286All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1383Open in IMG/M
3300025551|Ga0210131_1063146All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria615Open in IMG/M
3300025899|Ga0207642_10993218All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium540Open in IMG/M
3300025931|Ga0207644_10946354All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria722Open in IMG/M
3300025939|Ga0207665_10133714All Organisms → cellular organisms → Bacteria1763Open in IMG/M
3300025941|Ga0207711_10843612All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria853Open in IMG/M
3300025960|Ga0207651_10987531All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria752Open in IMG/M
3300026023|Ga0207677_10915571All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria791Open in IMG/M
3300026088|Ga0207641_11309686All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria725Open in IMG/M
3300026323|Ga0209472_1178021All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria760Open in IMG/M
3300027513|Ga0208685_1020961All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1480Open in IMG/M
3300027530|Ga0209216_1058374All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria653Open in IMG/M
3300027614|Ga0209970_1056187All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria717Open in IMG/M
3300027665|Ga0209983_1058162All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria852Open in IMG/M
3300027695|Ga0209966_1026622All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1153Open in IMG/M
3300027815|Ga0209726_10501568All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria544Open in IMG/M
3300027875|Ga0209283_10217548All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300027880|Ga0209481_10182027All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1046Open in IMG/M
3300027909|Ga0209382_10073592All Organisms → cellular organisms → Bacteria4035Open in IMG/M
3300027909|Ga0209382_11384932All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria707Open in IMG/M
3300027909|Ga0209382_11523979All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria665Open in IMG/M
3300027909|Ga0209382_11849438All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium586Open in IMG/M
3300027909|Ga0209382_12046992All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria547Open in IMG/M
3300028379|Ga0268266_10904843All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria853Open in IMG/M
3300028380|Ga0268265_12540341All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria518Open in IMG/M
3300028802|Ga0307503_10514688All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium647Open in IMG/M
3300028802|Ga0307503_10576341All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria617Open in IMG/M
3300028803|Ga0307281_10112209All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria927Open in IMG/M
3300028814|Ga0307302_10479503All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria617Open in IMG/M
(restricted) 3300031197|Ga0255310_10088681All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria825Open in IMG/M
3300031200|Ga0307496_10082348All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria600Open in IMG/M
3300031226|Ga0307497_10211227All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria846Open in IMG/M
3300031538|Ga0310888_10558151All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria691Open in IMG/M
3300031547|Ga0310887_10257817All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria976Open in IMG/M
3300031820|Ga0307473_11492589All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria512Open in IMG/M
3300031852|Ga0307410_10076665All Organisms → cellular organisms → Bacteria2334Open in IMG/M
3300031854|Ga0310904_10180714All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1255Open in IMG/M
3300031858|Ga0310892_10443731All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria854Open in IMG/M
3300031858|Ga0310892_10717204All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria687Open in IMG/M
3300031858|Ga0310892_10748864All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria674Open in IMG/M
3300031903|Ga0307407_10258273All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1197Open in IMG/M
3300031965|Ga0326597_11616110All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria617Open in IMG/M
3300032000|Ga0310903_10306428All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria783Open in IMG/M
3300032000|Ga0310903_10755912All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium529Open in IMG/M
3300032012|Ga0310902_11207561All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria533Open in IMG/M
3300032122|Ga0310895_10338205All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria722Open in IMG/M
3300032126|Ga0307415_100025044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3738Open in IMG/M
3300033434|Ga0316613_11094292All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria549Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere15.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.88%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil8.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.80%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.08%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.08%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.40%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.72%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.04%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.04%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.04%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.04%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.36%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.36%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.36%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.68%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.68%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.68%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.68%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.68%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.68%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.68%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.68%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.68%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.68%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.68%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.68%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300004025Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011406Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2EnvironmentalOpen in IMG/M
3300011409Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300011438Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012137Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT560_2EnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012510Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610Host-AssociatedOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014861Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10DEnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021063Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025551Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027513Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)EnvironmentalOpen in IMG/M
3300027530Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027614Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027665Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033434Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_bEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J11758_1291102723300000789SoilVQFEAPHSVNEIQRSRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLXSFKXXDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS*
JGI10216J12902_10250840613300000956SoilQLPRALTLAEHRALRLNAAWYTFLPDQVLKVAAWSFFQEFKKSDMRAWDAFIQSHPDTPFTGGAKLPWDATGMTELSKFETKYVAKRKWR*
JGI10216J12902_10311787323300000956SoilRARKVVKGPFSAMKGQLTRALTLDEHKELGLNAAWYTFLPDQVLKISSWRFLESFKKKDMRAWYEFLEEHPNTPFTGGQALPWDATGMSELTKLEARYFPKKKRR*
soilL2_1001579223300003319Sugarcane Root And Bulk SoilDQVLKISAWAFFQQFKKKDIQAWNEFTAAHAGTPFTGGAKLPWDATGMTELSRWEARYARKRQRR*
Ga0055435_1003160113300003994Natural And Restored WetlandsVKGPFSAMKGQLPRALTLAEHKALGLNAAWYTFLPDQVLKVSAWSFFQEFKKKDMRAWDEYVQAHPETPFTGGAKLPWDATGMTELSKFEAKYAPKRKRR*
Ga0055437_1014088613300004009Natural And Restored WetlandsLNAAWYTFLPDQVLKVSAWSFFQEFKKKDMRAWDEYVQAHPETPFTGGAKLPWDATGMTELSKFEAKYAPKRKRR*
Ga0055465_1031890023300004013Natural And Restored WetlandsVLKVSAWSFFQEFNKKDIIAWDEFRQAHAETPFTGGPQLPWDATGMSELAKFERKYAPKRKRRR*
Ga0055439_1000852613300004019Natural And Restored WetlandsWYTFLPDQVLKVSAWSFFQVFKKKDMRAWDEYVQAHPETPFTGGAKLPWDATGMTELSKFEAKYAPKRKRR*
Ga0055433_1014374713300004025Natural And Restored WetlandsLNAAWYTFLPDQVLKVSAWSFFQEFKKKDMRAWDEYVQAHPETPFTGGAKLPWDETGMTELSKFEAKYAPKRKRR*
Ga0062591_10232496213300004643SoilEALGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKSRRN*
Ga0065705_1098569223300005294Switchgrass RhizosphereALTLSEHAALGLNAAWYTFLPDLVLKTAAWSFFQKFKKKDMGAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEATYATNPKRR*
Ga0070676_1147619423300005328Miscanthus RhizosphereMKGELPRALTLAEHKELQLNAAWYTFLPDQVLKIAAWRFLESFKQKDMRAWFEFTNDNPDTPFSGGKALPWDATGMSELSQLETRYFTKKKRR*
Ga0070683_10116296213300005329Corn RhizosphereKGPFSAMKGQLPRALTLKQHEALGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKARRN*
Ga0070690_10167905513300005330Switchgrass RhizosphereLRLNAAWYTFLPDQVLKVSAWSFFQEFKKNDMRAWDAFVLAHPETPFTGGAKLPWDATGMTELSKFEVKYASKRKRR*
Ga0070692_1061255923300005345Corn, Switchgrass And Miscanthus RhizosphereNAAWYTFLPDQVLKIAAWRFLESFKQKDMRAWFEFTNDNPDTPFSGGKALPWDATGMSELSQLETRYFTKKKRR*
Ga0070688_10036141013300005365Switchgrass RhizosphereVVKGPFSAMKGQLPRALTLDEHKKLGLNAAWYTFLPDLVLKTAAWSFFKEFNKKDMRAWDEFAGLHGGTPFTGGLKLPWDATGMTELSKLEATYANGRKRR*
Ga0066686_1111749523300005446SoilVKGPFSAMKGQLPRALTLAEHGALKLNAAWYTFLPDLVLKASAWSFLETFQDRGIGAWFEFLEKNPDTPFTGGKAWNWDATGMTELTKLEARYFREKKRR*
Ga0070706_10200559913300005467Corn, Switchgrass And Miscanthus RhizosphereYTFLPDLVLKTAAWSFFQKFKKKDMGAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEATYATNSKRR*
Ga0070697_10026556613300005536Corn, Switchgrass And Miscanthus RhizosphereLPRALTLSEHAALGLNAAWYTFLPDLVLKTAAWSFFQKFKKKDMGAWDEFAAAHSGTPFTGCGKLPWDATGMTELSKLEATYATNPKRR*
Ga0070665_10208435613300005548Switchgrass RhizosphereRALTLKEHKALGLNAAWYTFLPDLVLKTAAWSFFQDFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKSRRN*
Ga0070704_10170215823300005549Corn, Switchgrass And Miscanthus RhizosphereLPRALTLSEHVALGLNAAWYTFLPDLVLKTAAWSFFQKFKKKDMGAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEATYATNPKRR*
Ga0068859_10300027013300005617Switchgrass RhizosphereFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKSRRN*
Ga0068866_1023789923300005718Miscanthus RhizosphereRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS*
Ga0074479_1114963013300005829Sediment (Intertidal)YTFLPDQVLKISAWSFFQEFKAKDMRAWDELVLAHPGTPFTGGAKLPWDATGMSELSKFEAKYAPKRKRRS*
Ga0068863_10203876223300005841Switchgrass RhizosphereLGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS*
Ga0081538_1036779123300005981Tabebuia Heterophylla RhizosphereFSAMKGQLPRALTLAEHRDLGLSAAWYTFLPDQVLKTAAWSFFQEFKKKDIVAWDEFRQVHTETPFTGGPQLPWDATGMSELAKFELKYAPKRKGRV*
Ga0075432_1060769413300006058Populus RhizosphereLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARDFSKRKRRS*
Ga0070716_10096477523300006173Corn, Switchgrass And Miscanthus RhizosphereLRLNAAWYTFLPDLVLKTAAWSFFQEFQKKGMRAWDEFILANPDTPFTGGAKWNWDVTGMAELMKFEARYFAKKKRR*
Ga0068871_10241995313300006358Miscanthus RhizosphereALGLNAAWYTFLPDLVLKTAAWSFFQKFKKKDMGAWDEFAAAHSGTPFTGGRKLPWDATGMTELSKLEATYATNPKRR*
Ga0079222_1156264123300006755Agricultural SoilRRAVKGPFSAMKGELPRPLTLAEHKALGLNAAWYTFVPDQVLKISAWCFFQQFKKKDIQAWNEFTAAHAGTPFTGGPKLPWDATGMTELSRWEAKYARKRQRR*
Ga0075421_10084882823300006845Populus RhizosphereFSAMKGQLPRALTLDEHRALGLNAAWYTFLPDQVLKISAWAFLQNFKKKDVLAWHEFMQAHQGTPFTGGEVLPWDVTGMGELAKFEAKYATKQKRKA*
Ga0075421_10256585113300006845Populus RhizosphereWYTFLPDQVLKISSWRFLESFRRKDMRAWYEFLEEHPGTPFTGGQALPWDATGMSELTKLEARYLPKKKRRVV*
Ga0075430_10072520213300006846Populus RhizosphereRRVVKGPFSAMKGQLPRALTLKEHEALGLNAAWYTFLPDLVLKTAAWSFFQEFKDKDMRAWDEFAAAHNGTPFTGGGNLPWDVTGMTELSKLEASYARKSKRR*
Ga0075431_10010964013300006847Populus RhizosphereLTLAEHKALGLSAAWYTFLPDQVLKVSAWSFFQEFNKKDILAWDEFTQTHAETPFTGGGKLPWDATGMSELAKFEVKYAPQRKRRS*
Ga0075433_1022226113300006852Populus RhizosphereKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFFESFKKKDMRAWYEFLEANPHTPFSGGEALPWDATGMSELTKLETRYFSKRKRRS*
Ga0075433_1093728013300006852Populus RhizosphereAAWYTFLPDQVLKVSAWSFFQEFKKKDMRAWDEFVLTHPDTPFTGGVKLPWDATGMTELSKFEMKYAPKRKRR*
Ga0075433_1109299913300006852Populus RhizosphereKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS*
Ga0075420_10062259723300006853Populus RhizosphereLNAAWYTFLPDLVLKTAAWSFFQEFKDKDMRAWDEFAAAHNGTPFTGGGNLPWDATGMTELSKLEASYARKSKRR*
Ga0075425_10229057013300006854Populus RhizosphereRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFFESFKKKDMRAWYEFLEANPHTPFSGGEALPWDATGMSELTKLETRYFSKRKRRS*
Ga0075434_10010505743300006871Populus RhizosphereGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKARRN*
Ga0068865_10175569313300006881Miscanthus RhizosphereKGPFSAMKGELPRALTLAEHKELQLNAAWYTFLPDQVLKIAAWRFLESFKEKDMNAWFEFTNDNPDTPFSGGKALPWDATGMSELSQLETRYFTKKKRR*
Ga0079215_1007535633300006894Agricultural SoilDQVLKISAWSFLQEFNKKDILAWNEFTQTHAETPFTGGPKLPWDATGMSELAKFEVKYASQRKRRS*
Ga0075424_10182697123300006904Populus RhizosphereLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS*
Ga0079218_1036226023300007004Agricultural SoilLKEHEALGLNAAWYTFLPDLVLKTAAWSFFQEFKDKDMRAWEEFAAAHNGTPFTGGGKLPWDATGMTELSKLEASYSRKSKRR*
Ga0066710_10078153113300009012Grasslands SoilPHSIDQIKRARKVVRGSFSAMKRQLPRALTLAEHRTLHLTAAWYTFLPDQVLKASAWSFLQAFRRQGIRAWEEFIVANPDTPFTGGKKWSWDATGMMELSTLEAKYFASKRRR
Ga0105098_1067336013300009081Freshwater SedimentWYTFLPDQVLKISAWSFFQEFNKKDILAWDEFTQTHAETPFTGGGKLPWDATGMSELAKFEVKYAPQRKRRS*
Ga0115026_1011366423300009111WetlandMKGQLPRALTLAEHRALGLTAAWYTFLPDQVLKVSAWSFFQEFKKKDMSAWDEFVQSHPDTPFTGGAKLPWDATGMTELSKLEARYAPRRQRR*
Ga0114129_1100533713300009147Populus RhizospherePFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTQLEARYFSKRKGRS*
Ga0111538_1006100513300009156Populus RhizosphereRARSLVKGAFSAMKGQLPRALTLDEHRALGLNAAWYTFLPDQVLKISAWAFLQNFKKKDVLAWHEFMQAHQGTPFTGGEVLPWDVTGMGELAKFEAKYATKQKRKA*
Ga0111538_1101416723300009156Populus RhizosphereWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTQLEARYFSKRKGRS*
Ga0075423_1016225913300009162Populus RhizosphereLTLKQHEALGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGSPVTGGGKLPWDATGMTELSKLEASYAMRARRN*
Ga0075423_1046367323300009162Populus RhizosphereRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWCTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS*
Ga0126376_1046311123300010359Tropical Forest SoilVKGPFSAMKGQLPRALTMAEHKALGLNAAWYTFLPDQVLEISAWTFLQSFKKKDVMAWEEFTQAHQGTPFTGGEELPWDVTGMGELAKFEVKYAVKQKRR*
Ga0126381_10056339033300010376Tropical Forest SoilVKGPFSAMKGQLPRALTMAEHKALGLNAAWYTFLPDQVLKISAWTFLQSFKKKDVMAWEEFTQAHQGTPFTGGEELPWDVTGMDQLAKFEVKYAVKQKRRS*
Ga0134122_1126048923300010400Terrestrial SoilAEHKALGLNAAWYTFVPDQVLKISAWCFFQQFKKKDIQAWNEFTAAHAGTPFTGGPKLPWDATGMSELTRVESKYFSKKRG*
Ga0134121_1021359713300010401Terrestrial SoilVVKGPFSAMKGQLPRALTLKQHEALGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKARRN*
Ga0134123_1038920513300010403Terrestrial SoilAWYTFLPDLVLKTAVWSFFQEFKNKDMGAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEATYATNSKRR*
Ga0134123_1135286023300010403Terrestrial SoilARRVVKGPFSAMKGQLPRALTLKQHEALGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKARRN*
Ga0137454_108326423300011406SoilWYTFLPDQVLKVSAWSFFQKFKKDDMRAWDEFVLAHPDTPFTGGAKLPWDATGMTELSKFEAKYAPKRKRR*
Ga0137323_108463813300011409SoilLPRALTLADHKALGLNAAWYTFLPDQVLKVSAWWFFQEFKKKDMRAWDEFVLTHPDTPFTGGAKLPWDATGMTELSKFEAKYAPMRKRR*
Ga0137429_100963253300011437SoilAMKGQLPRALTLADHKALGLNAAWYTFLPDQVLKVSAWWFFKEFKKKDMRAWDEFVQSHPDTPFTGGAKLPWDATGMTELSKFEAKYAPKHKRR*
Ga0137429_101663913300011437SoilALTLAEHKALRLNAAWYTFLPDQVLKVSAWWFFQEFKKKDMRAWDEFVLTHPDTPFTGGAKLPWDATGMTELSKFEAKYAPMRKRR*
Ga0137451_124182013300011438SoilLNAAWYTFLPDQVLKVSAWAFFQEYKKKDMRAWDEFVQAHPATPFTGGAKLPWDATGMTELSKFEAKYAPKRKRR*
Ga0137437_100312513300011442SoilALGLNAAWYTFLPDQVLKVSAWWFFQEFKKKDMRAWDEFVQSHPDTPFTGGAKLPWDATGMTELSKFEAKYVPKRKRR*
Ga0137457_115934013300011443SoilPDQVLKVSAWSFFQEFKKQDMRAWDEFVRSHADTPFTGGAKLPWDATGMTELSKFETKYAPKRKRR*
Ga0137463_128307023300011444SoilLPDQVLKVSAWAFFQEFKKIDMHAWDEFVQAHPDTPFTGGAKLPWDATGMTELSKFEAKYAPKRKRR*
Ga0137427_1017357123300011445SoilFLPDQVLKVSAWWFFQEFKKKDMRAWDELVQSHPDTPFTGGAKLPWDATGMTELSKFEARYATNRKRR*
Ga0137346_103998313300012137SoilPFSAMKGQLPRALTLAEHRALGLTAAWYTFLPDQVLKVSAWSFFQEFKKKDMSAWDEFVQSHPDTPFTGGAKLPWDATGMTELSKFETKYAPKRKRR*
Ga0137380_1033233613300012206Vadose Zone SoilKELGLNAAWYTFLPDQVLKISSWRFLESFKKKDMRAWYEFLEEHPDTPFTGGQALPWDATGMSELTKLEARYFPKKKRR*
Ga0137378_1060812413300012210Vadose Zone SoilGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLEEHPNTPFTGGQALPWDATGMSELTKLEARYFPKKRR*
Ga0157316_106731313300012510Arabidopsis RhizosphereVKGPFSAMKGQLPRALTLKQHEALGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKARRN*
Ga0137410_1028069423300012944Vadose Zone SoilEHRQLGLNAAWYTFLPDQVLKTAAWRFFESFKKKDVRAWYEFLEANPDTPFSGGKALPWDATGMSELTKLEARYFSKRKRRS*
Ga0163162_1098178523300013306Switchgrass RhizosphereALGLNAAWYTFLPDLVLKTAAWSFFQKFKKKDMGAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEATYATNPKRR*
Ga0180061_103834413300014861SoilALTLADHKALGLNAAWYTFLPDQVLKVSAWWFFQEFKKKDTRAWDEFVQSHPDTPFTGGAKLPWDATGMTELSKFEAKYASKRERR*
Ga0180066_107282323300014873SoilVVKGPFSAMKGQLSRALTLAEHKALGLNAAWYTFLPDQVLKVSAWWFFHEFKKKDMRAWDEFVQAHPDTPFTGGAKLPWDATGMTELSKFEAKYAPRRKRR*
Ga0173483_1040959313300015077SoilWYTFLPDLVLKAAAWSFFQEFKNKDMHAWDDFAAAHSGTPFTGGGKLPWDATGMTELSKFEQNYAIKAKRR*
Ga0173478_1053201213300015201SoilWYTFLPDLVLKTAAWSFFQDFKNKDMRAWDEFAAAHSGTPFTGGAKLPWDATGMTELSKLEASYASKSKRR*
Ga0132256_10104213713300015372Arabidopsis RhizosphereTLKQHEALGLNAAWYTFLPDLVLKTAVWSFFQEFKKKDMGAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEATYATNSKRR*
Ga0132256_10307999423300015372Arabidopsis RhizospherePFSAMKGHLPRALSLQEHRALRLNAAWYTFLPDLVPKASAWSFLKSFQKNGIAAWSEFAAARPDTPFTGGERWTWDASGTAELAKLEARYSRKRK*
Ga0132257_10257574113300015373Arabidopsis RhizosphereNEIQRSRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLEAFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKGRS*
Ga0132255_10154147223300015374Arabidopsis RhizosphereVVKGPFSAMKGQLPRALTLKQHEALGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKSRRN*
Ga0132255_10337575223300015374Arabidopsis RhizosphereEAPHSVNEIQRSRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLEAFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKGRS*
Ga0182037_1184520813300016404SoilAMKGQLPRALTLAEHKALGLNAAWYTFLPDQVLKISAWMFLQSFKKKDVVAWEEFAQAHHGTPFTGGEELPWDVTGMGELEKFEAKYAVKQKRRS
Ga0184605_1003331333300018027Groundwater SedimentFLPDQVLKVSAWSFFQEFKKKDVGAWDEFVQAHAGTPFTGGATLPWDATGMRELAKFEAKYTPGRERRARK
Ga0184626_1012057913300018053Groundwater SedimentPDQVLKVSAWSFFQEFKKKDVGAWDEFVQAHAGTPFTGGPKLPWDATGMTELAKFEAKYAPGHERRSRK
Ga0184617_104648623300018066Groundwater SedimentWYTFLPDQVLKIAAWRFLESFKHKDMRAWFEFTNDNPDTPFSGGKALPWDATGMSELSQWEARYFTKKKRR
Ga0184609_1007835813300018076Groundwater SedimentDQVLKVSAWSFFQEFKKKDVGAWDEFVQAHAGTPFTGGATLPWDATGMRELAKFEAKYAPGRERRARK
Ga0184612_1022532823300018078Groundwater SedimentVKGPFSAMKGQLPRALTLAEHRALGLNAAWYTFLPDLVLKTSAWFFFQEFKKKDMRAWDEFAQARPGTPFTGGAKLPWDATGMTELSKFEAKYGSERKRR
Ga0190265_1274675023300018422SoilVKGPFSAMKGQLPRALTLAEHRALALNAAWYTFLPDLVLKTSAWFFFQEFKKKDMRAWDEFMQARPGTPFTGGAKLPWDATGMAELSKFEAKYASERKRR
Ga0190269_1122240023300018465SoilLKEHEALGLNAAWYTFLPDLVLKTAAWSFFQDFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYASKSKRR
Ga0190264_1003015413300019377SoilPFSAMKGQLPRALTLKEHAAFGLNAAWYTFLPDLVLKTAAWSFFQEFKDKDMRAWDEFAAAHSGTPFTGGGTLPWDATGMTELSKLEASYASKSKRR
Ga0193713_102962533300019882SoilPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKGRS
Ga0193731_107592713300020001SoilVNEIKRSRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFFESFKKKDMRAWYEFLEANPDTPFSGGKALPWDATGMSELTKLEARYFSKRKRRS
Ga0193755_106987523300020004SoilMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFFESFKKKDMRAWYEFLEANPDTPFSGGKALPWDATGMSELTKLEARYFSKRKRRS
Ga0210401_1056019813300020583SoilDQVLKTAAWSFFQEFQKKGMRAWDEFILANPDTPFTGGAKWNWDATGMAELMKFEARYFAKKKRR
Ga0206227_110986813300021063Deep Subsurface SedimentKRARRVVKGPFSAMKGQLPRALTLAEHKALGLNAAWYTFLPDQVLKVSAWWFFQEFKKKDMRAWDEFVQSHLDTPFTGGAKLPWDATGMTELSKFEAKYAPKRKQR
Ga0210379_1006082013300021081Groundwater SedimentMKGQLPRALTLADHKALGLNAAWYTFLPDQVLKVSAWWFFQEFKKKDMRAWDELVQSHPDTPFTGGAKLPWDATGMTELSKFEAKYAPKHKRR
Ga0193719_1012913723300021344SoilEIKRSRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFFESFKKKDMRAWYEFLEANPDTPFSGGKALPWDATGMSELTKLEARYFSKRKRRS
Ga0222622_1133241123300022756Groundwater SedimentAEHKELQLNAAWYTFLPDQVLKIAAWRFLESFKEKDMNAWFEFTSDNPDTPFSGGKALPWDATGMSELSQWETRYFTKKKRR
Ga0207697_1007928613300025315Corn, Switchgrass And Miscanthus RhizosphereNAAWYTFLPDLVLKTAAWSFFQKFKKKDMGAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEATYATNPKRR
Ga0210131_106314623300025551Natural And Restored WetlandsLTLAEHKALGLNAAWYTFLPDQVLKVSAWSFFQEFKKKDMRAWDEYVQAHPETPFTGGAKLPWDATGMTELSKFEAKYAPKRKRR
Ga0207642_1099321813300025899Miscanthus RhizosphereRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS
Ga0207644_1094635423300025931Switchgrass RhizosphereKGQLPRALTLDEHKKLGLNAAWYTFLPDLVLKTAAWSFFKEFNKKDMRAWDEFAGLHGGTPFTGGLKLPWDATGMTELSKLEATYANGRKRR
Ga0207665_1013371433300025939Corn, Switchgrass And Miscanthus RhizosphereNAAWYTFLPDLVLKTAAWSFFQEFQKKGMRAWDEFMLANPDTPFTGGAKWNWDVTGMAELMKFEARYFAKKKRR
Ga0207711_1084361213300025941Switchgrass RhizosphereALTLSEHVALGLNAAWYTFLPDLVLKTAAWSFFQKFKKKDMGAWDEFAAAHSGTPFTGGRKLPWDATGMTELSKLEATYATNPKRR
Ga0207651_1098753113300025960Switchgrass RhizosphereNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKSRRN
Ga0207677_1091557113300026023Miscanthus RhizosphereFLPDLVLKTAAWSFFQKFKKKDMGAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEATYATNPKRR
Ga0207641_1130968623300026088Switchgrass RhizosphereHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS
Ga0209472_117802113300026323SoilKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFFESFKKKDMRAWYEFLEANPDTPFSGGKALPWDATGMSELTKLEARYFSKRKRRS
Ga0208685_102096113300027513SoilWYTFLPDQVLKVSAWSFFQEFKKKDMSAWDEFVQSHPDTPFTGGAKLPWDATGMTELSKLEARYAPRRQRR
Ga0209216_105837423300027530Forest SoilEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS
Ga0209970_105618723300027614Arabidopsis Thaliana RhizospherePFSAMKGQLSRALTLAEHRDLGLSAAWYTFLPDQVLKVSAWSFFQEFNKKDIVAWDEFRHVHAETPFTGGSQLPWDATGMSELAKFERKYAPKRRRRS
Ga0209983_105816223300027665Arabidopsis Thaliana RhizosphereDQVLKVSAWSFFQEFNKKDIVAWDEFRHVHAETPFTGGSQLPWDATGMSELAKFERKYAPKRRRRS
Ga0209966_102662223300027695Arabidopsis Thaliana RhizosphereLAEHRDLGLSAAWYTFLPDQVLKVSAWSFFQEFNKKDIVAWDEFRHVHAETPFTGGSQLPWDATGMSELAKFERKYAPKRRRRS
Ga0209726_1050156823300027815GroundwaterLPRALTLAEHKALGLNAAWYTFLPDQVLKVSAWAFFQAYKKKDMRAWDEFVQAHPDTPFTGGAKLPWDATGMTELSKFEAKYALKRKRR
Ga0209283_1021754813300027875Vadose Zone SoilLNAAWYTFLPDLVLKTAAWSFFQEFQKKGMRAWDEFMLANPDTPFTGGAKWKWDATGMAELTKLEARYFAKKKRK
Ga0209481_1018202713300027880Populus RhizospherePRALTLKEHEALGLNAAWYTFLPDLVLKTAAWSFFQDFKDKDMRAWDEFAAAHNGTPFTGGGNLPWDATGMTELSKLEASYARKSKRR
Ga0209382_1007359263300027909Populus RhizosphereVLKISAWSFFQEFNKKDILAWDEFTQTHAETPFTGGGKLPWDATGMSELAKFEVKYAPQRKRRS
Ga0209382_1138493213300027909Populus RhizosphereLGLNAAWYTFLPDQVLKISAWAFLQNFKKKDVLAWHEFMQAHQGTPFTGGEVLPWDVTGMGELAKFEAKYATKQKRKA
Ga0209382_1152397923300027909Populus RhizosphereWYTFLPDQVLKVSAWWFFQEFKKKDMRAWDELVQSHPNTPFTEGAKLPWDATGMTELSKFEAKYAPKRKRR
Ga0209382_1184943823300027909Populus RhizosphereGPFSAMKGQLPRALTLAEHRVLRLTAAWYTFLPDQVLKASAWSFLQAFKREGIRAWEEFIVANPDTPFTGGKKWSWDATGMTELSTLEAKYFASKRRR
Ga0209382_1204699223300027909Populus RhizosphereLGLNAAWYTFLPDQVLKISSWRFLESFKKKDMRAWYEFLEEHPNTPFTGGQALPWDATGMSELTKLEARYFPKKKRR
Ga0268266_1090484313300028379Switchgrass RhizosphereLPDLVLKTAVWSFFQEFKNKDMGAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEATYATNSKRR
Ga0268265_1254034113300028380Switchgrass RhizosphereKELQLNAAWYTFLPDQVLKIAAWRFLESFKEKDMIAWFEFTNDNPDTPFSGGKALPWDASGMSELSQWETRYFTKKKRR
Ga0307503_1051468813300028802SoilSVNEIQRSRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS
Ga0307503_1057634113300028802SoilGLTAAWYTFLPDQVLKVSAWSFFQEFKKKDMNAWDEFVQSHPDTPFTGGAKLPWDATGMTELSKLEARYAPRRQRR
Ga0307281_1011220913300028803SoilYTFLPDQVLKVSAWWFFQEFKKKDMRAWDEFVQSHPDTPFTGGAKLPWDATGMTELSKFEAKYASKRKRR
Ga0307302_1047950323300028814SoilGLNAAWYTFLPDQVLKVSAWSFFQEFKKKDVGAWDEFVQAHAGTPFTGGATLPWDATGMRELAKFEAKYAPGRERRARK
(restricted) Ga0255310_1008868113300031197Sandy SoilLSLAEHRALGLTAAWYTFLPDQVLKVSAWSFFQEFKKKDMGAWDEFVQLHPDTPFTGGAKLPWDATGMTELSKWEARYAPRRKRR
Ga0307496_1008234823300031200SoilSRKVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGAALPWDATGMSELTKLEARYFSKRKRRS
Ga0307497_1021122723300031226SoilEHRTLRLNAAWYTFLPDQVLKVSAWSFFQEFKKNDMRAWDAFVLAHPETPFTGGAKLPWDATGMTELSKFEVKYASKRKRR
Ga0310888_1055815123300031538SoilLRLNAAWYTFLPDQVLKVSAWSFFQEFKKNDMRAWDAFVLAHPETPFTGGAKLPWDATGMTELSKFEVKYASKRKRR
Ga0310887_1025781713300031547SoilVVKGPFSAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKGRS
Ga0307473_1149258913300031820Hardwood Forest SoilPRALTLAEHRQLGLNAAWYTFLPDQVLKTAAWRFFESFKKKDMRAWYEFLEANPDTPFSGGKALPWDATGMSELTKLETRYFSKRKRRS
Ga0307410_1007666533300031852RhizosphereMKGQLPRALTLKEHAALGLNAAWYTFLPDLVLKTAAWSFFQEFKNKGMRAWDDFAAAHSGTPFTGGGKLPWDATGMTELSKFEQNYAIKSKRR
Ga0310904_1018071413300031854SoilHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTQLEARYFSKRKGRS
Ga0310892_1044373123300031858SoilKGPFSAMKGQLPRALTLKQHEALGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKARRN
Ga0310892_1071720413300031858SoilPFSAMKGQLPRALTLAEHRALGLTAAWYTFLPDQVLKVSAWSFFQEFKRKDMNAWDEFVLSHPDTPFTGGANLPWDATGMTELSKLEARYAPRRKRR
Ga0310892_1074886413300031858SoilVDNGPISAMKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS
Ga0307407_1025827323300031903RhizosphereAMKGQLPRALTLKEHAALGLNAAWYTFLPDLVLKTAAWSFFQEFKNKGMRAWDDFAAAHSGTPFTGGGKLPWDATGMTELSEFEQNYAIKSKRR
Ga0326597_1161611023300031965SoilKVVRGPFSAMKGQLPRALTLAEHKELGLNAAWYTFLPDQVLKVSAWWFFQQFKKKDMRAWDEFMQSHPDTPFTGGAKLPWDATGMTELSKFETKYAPKRKRR
Ga0310903_1030642813300032000SoilKGQLPRALTLAEHRELGLNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKRRS
Ga0310903_1075591223300032000SoilFSAMKGQLPRALTLKQHEALGLNAAWYTFLPDLVLKTAVWSFFQEFKNKDMRAWDEFAAAHSGTPFTGGGKLPWDATGMTELSKLEASYAMKSRRN
Ga0310902_1120756123300032012SoilNAAWYTFLPDQVLKTAAWRFLESFKKKDMRAWYEFLDANPHTPFSGGEALPWDATGMSELTKLEARYFSKRKGRS
Ga0310895_1033820523300032122SoilDLVLKTAAWSFFQDFKNKDMRAWDEFAAAHSGTPFTGGAKLPWDATGMTELSKLEASYASKSKRR
Ga0307415_10002504413300032126RhizosphereAMKGQLPQALTLKEHAALGLNAAWYTFLPDLVLKTAAWSFFQEFKNKGMRAWDDFAAAHSGTPFTGGGKLPWDATGMTELSKFEQNYAIKSKRR
Ga0316613_1109429213300033434SoilAEHRALGLTAAWYTFLPDQVLKVSAWSFFQEFKRKDMNAWDEFVLSHPDTPFTGGANLPWDATGMTELSKLEARYAPRRKRR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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