Metagenome / Metatranscriptome Family F049108

Basic Information
Family ID	F049108
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	39 residues
Representative Sequence	LLVSEMATSRNTTAENAEATVVKSLAKAKLQFPVMTEKFE
Number of Associated Samples	116
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.04 %
% of genes near scaffold ends (potentially truncated)	93.88 %
% of genes from short scaffolds (< 2000 bps)	85.03 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (82.993 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.456 % of family members)
Environment Ontology (ENVO)	Unclassified (41.497 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.177 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.41% β-sheet: 0.00% Coil/Unstructured: 70.59%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF03746	LamB_YcsF	29.93
PF00814	TsaD	18.37
PF02538	Hydantoinase_B	7.48
PF01627	Hpt	2.72
PF02626	CT_A_B	2.04
PF13519	VWA_2	1.36
PF12796	Ank_2	1.36
PF12867	DinB_2	1.36
PF16702	DUF5063	0.68
PF02559	CarD_CdnL_TRCF	0.68
PF00291	PALP	0.68
PF06739	SBBP	0.68
PF16859	TetR_C_11	0.68
PF13414	TPR_11	0.68
PF00664	ABC_membrane	0.68
PF02682	CT_C_D	0.68
PF03544	TonB_C	0.68
PF00903	Glyoxalase	0.68
PF05977	MFS_3	0.68
PF05016	ParE_toxin	0.68
PF00072	Response_reg	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG1540	5-oxoprolinase subunit A	Amino acid transport and metabolism [E]	29.93
COG0533	tRNA A37 threonylcarbamoyltransferase TsaD	Translation, ribosomal structure and biogenesis [J]	18.37
COG1214	tRNA A37 threonylcarbamoyladenosine modification protein TsaB	Translation, ribosomal structure and biogenesis [J]	18.37
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	14.97
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.68
COG2049	5-oxoprolinase subunit B/Allophanate hydrolase subunit 1	Amino acid transport and metabolism [E]	0.68
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.99 %
Unclassified	root	N/A	17.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.99 %
Unclassified	root	N/A	17.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.99 %
Unclassified	root	N/A	17.01 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.14 %
Unclassified	root	N/A	17.01 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.68 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	44.90 %
Unclassified	root	N/A	17.01 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.48 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.68 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.68 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.22 %
Unclassified	root	N/A	17.01 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.08 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.72 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.68 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.68 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.22 %
Unclassified	root	N/A	17.01 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.08 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.36 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.36 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.68 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.68 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.68 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.22 %
Unclassified	root	N/A	17.01 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.36 %
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	1.36 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.36 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.68 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.68 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.68 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.68 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.22 %
Unclassified	root	N/A	17.01 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1.36 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.68 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	0.68 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.68 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.68 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.68 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.68 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	44.22 %
Unclassified	root	N/A	17.01 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1.36 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.68 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	0.68 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.68 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.68 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.68 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.68 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111019\|2221119133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300002907\|JGI25613J43889_10174823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300004080\|Ga0062385_10093902	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300004152\|Ga0062386_100942016	Not Available	714	Open in IMG/M
3300004479\|Ga0062595_100362692	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300004479\|Ga0062595_101377885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300005172\|Ga0066683_10615019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300005179\|Ga0066684_10633260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300005332\|Ga0066388_100582841	Not Available	1744	Open in IMG/M
3300005568\|Ga0066703_10523490	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300006086\|Ga0075019_10320357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300006176\|Ga0070765_101256122	Not Available	699	Open in IMG/M
3300007258\|Ga0099793_10309942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300007265\|Ga0099794_10065244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1775	Open in IMG/M
3300007265\|Ga0099794_10651925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300007788\|Ga0099795_10375967	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300009012\|Ga0066710_100036567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5841	Open in IMG/M
3300009038\|Ga0099829_10189426	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300009038\|Ga0099829_10234099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1494	Open in IMG/M
3300009038\|Ga0099829_11522000	Not Available	552	Open in IMG/M
3300009089\|Ga0099828_10757010	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300009089\|Ga0099828_11364752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300009090\|Ga0099827_11139552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300009137\|Ga0066709_102303732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300009137\|Ga0066709_103336691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300009553\|Ga0105249_12338565	Not Available	607	Open in IMG/M
3300010043\|Ga0126380_10436925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300010048\|Ga0126373_10505098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300010320\|Ga0134109_10127599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300010320\|Ga0134109_10477543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300010322\|Ga0134084_10477314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300010358\|Ga0126370_11664170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300010359\|Ga0126376_11943964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	629	Open in IMG/M
3300010361\|Ga0126378_12039665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300010376\|Ga0126381_100117317	All Organisms → cellular organisms → Bacteria	3436	Open in IMG/M
3300010379\|Ga0136449_101078183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300010398\|Ga0126383_13272335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	529	Open in IMG/M
3300011269\|Ga0137392_10111109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2174	Open in IMG/M
3300011269\|Ga0137392_10228637	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300011269\|Ga0137392_10296412	Not Available	1336	Open in IMG/M
3300011269\|Ga0137392_11075487	Not Available	660	Open in IMG/M
3300011271\|Ga0137393_10096783	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300011271\|Ga0137393_10397186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300012096\|Ga0137389_10342735	All Organisms → cellular organisms → Bacteria → Acidobacteria	1271	Open in IMG/M
3300012096\|Ga0137389_10390234	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300012189\|Ga0137388_10124617	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300012189\|Ga0137388_11435874	Not Available	628	Open in IMG/M
3300012189\|Ga0137388_11959573	Not Available	515	Open in IMG/M
3300012198\|Ga0137364_10537821	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300012199\|Ga0137383_10065829	All Organisms → cellular organisms → Bacteria	2607	Open in IMG/M
3300012199\|Ga0137383_10393403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300012201\|Ga0137365_10101405	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	2166	Open in IMG/M
3300012205\|Ga0137362_11635351	Not Available	531	Open in IMG/M
3300012207\|Ga0137381_11406051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300012211\|Ga0137377_11179552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300012351\|Ga0137386_10245626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1287	Open in IMG/M
3300012357\|Ga0137384_11271391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300012359\|Ga0137385_10442943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300012361\|Ga0137360_10449520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300012361\|Ga0137360_10524859	Not Available	1009	Open in IMG/M
3300012362\|Ga0137361_10326738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1406	Open in IMG/M
3300012363\|Ga0137390_10185950	All Organisms → cellular organisms → Bacteria	2064	Open in IMG/M
3300012363\|Ga0137390_11752788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300012683\|Ga0137398_10547129	All Organisms → cellular organisms → Bacteria → Acidobacteria	798	Open in IMG/M
3300012917\|Ga0137395_11153494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300012922\|Ga0137394_10903201	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300012923\|Ga0137359_10046154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3783	Open in IMG/M
3300012925\|Ga0137419_10218170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1422	Open in IMG/M
3300012925\|Ga0137419_10452882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300012925\|Ga0137419_10623792	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300012925\|Ga0137419_11762418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012929\|Ga0137404_10272733	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300012929\|Ga0137404_11143680	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300012930\|Ga0137407_12247185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012944\|Ga0137410_10341710	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300012957\|Ga0164303_11469530	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012971\|Ga0126369_10133738	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300012971\|Ga0126369_11486721	Not Available	767	Open in IMG/M
3300013307\|Ga0157372_11588495	Not Available	753	Open in IMG/M
3300014153\|Ga0181527_1140520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300014968\|Ga0157379_10179490	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300015054\|Ga0137420_1080060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300015241\|Ga0137418_10528567	Not Available	938	Open in IMG/M
3300015245\|Ga0137409_10073660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3198	Open in IMG/M
3300015245\|Ga0137409_10258404	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300015264\|Ga0137403_11095679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300016404\|Ga0182037_10558414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300016422\|Ga0182039_11383791	Not Available	639	Open in IMG/M
3300017822\|Ga0187802_10448096	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300017823\|Ga0187818_10036093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2123	Open in IMG/M
3300017823\|Ga0187818_10374009	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300017955\|Ga0187817_10621680	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300017973\|Ga0187780_10407544	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300017995\|Ga0187816_10554545	Not Available	518	Open in IMG/M
3300018040\|Ga0187862_10051109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3005	Open in IMG/M
3300018057\|Ga0187858_10047827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	3096	Open in IMG/M
3300018088\|Ga0187771_10065751	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2855	Open in IMG/M
3300018431\|Ga0066655_10856212	Not Available	620	Open in IMG/M
3300018468\|Ga0066662_10905051	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300020140\|Ga0179590_1019263	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300020170\|Ga0179594_10084029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300020579\|Ga0210407_10477666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	974	Open in IMG/M
3300020579\|Ga0210407_10611256	Not Available	849	Open in IMG/M
3300020580\|Ga0210403_10000526	All Organisms → cellular organisms → Bacteria	39662	Open in IMG/M
3300020581\|Ga0210399_10917643	Not Available	709	Open in IMG/M
3300020581\|Ga0210399_11250222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300021086\|Ga0179596_10480974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300021168\|Ga0210406_10907259	Not Available	662	Open in IMG/M
3300021170\|Ga0210400_10719236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300021171\|Ga0210405_11289421	Not Available	537	Open in IMG/M
3300021432\|Ga0210384_10146939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2115	Open in IMG/M
3300021432\|Ga0210384_11528970	Not Available	573	Open in IMG/M
3300021433\|Ga0210391_10349263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300021474\|Ga0210390_10196655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1705	Open in IMG/M
3300021479\|Ga0210410_11483935	Not Available	571	Open in IMG/M
3300021560\|Ga0126371_10801394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1088	Open in IMG/M
3300022724\|Ga0242665_10374850	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300026088\|Ga0207641_11235170	Not Available	747	Open in IMG/M
3300026301\|Ga0209238_1084002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300026334\|Ga0209377_1267411	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300026551\|Ga0209648_10453367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	794	Open in IMG/M
3300026557\|Ga0179587_10218890	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300027562\|Ga0209735_1104019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300027654\|Ga0209799_1157335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300027903\|Ga0209488_10529580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300027915\|Ga0209069_10092858	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300028792\|Ga0307504_10264875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300029943\|Ga0311340_11346819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031231\|Ga0170824_102717146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300031545\|Ga0318541_10446151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300031719\|Ga0306917_11239155	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031720\|Ga0307469_10859051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300031753\|Ga0307477_10006745	All Organisms → cellular organisms → Bacteria	8075	Open in IMG/M
3300031754\|Ga0307475_10933696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300031781\|Ga0318547_11082359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300031912\|Ga0306921_10310729	Not Available	1845	Open in IMG/M
3300031946\|Ga0310910_10073362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2476	Open in IMG/M
3300031962\|Ga0307479_10663244	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300032060\|Ga0318505_10196474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300032180\|Ga0307471_100096348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2667	Open in IMG/M
3300032180\|Ga0307471_100178351	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300032180\|Ga0307471_101555692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300032180\|Ga0307471_104095193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300032770\|Ga0335085_10334804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1779	Open in IMG/M
3300032770\|Ga0335085_11556467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300033402\|Ga0326728_10164900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2349	Open in IMG/M
3300033983\|Ga0371488_0174370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.28%
Host-Associated	Host-Associated	2.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.12%
Aquatic	Environmental → Aquatic	8.16%
Plants	Host-Associated → Plants	2.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.07%
Freshwater	Environmental → Aquatic → Freshwater	6.80%
Peat	Environmental → Terrestrial → Peat	2.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.04%
Sediment	Environmental → Aquatic → Sediment	1.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.63%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.72%
Loam	Environmental → Terrestrial → Soil → Loam	2.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.40%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.04%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.36%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.36%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.36%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.68%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111019	Grass soil microbial communities from Rothamsted Park, UK - FP1 and FP2 (Mercury 0.2g/kg) assembled	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049108

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2221853207	2209111019	Grass Soil	SSSVRSATARNLTAENAEGLVVKSLAKAKLQFPMMQEAVEQ
JGI25613J43889_101748231	3300002907	Grasslands Soil	LLVSEMATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0062385_100939023	3300004080	Bog Forest Soil	LLVSEMATARNTSAENAEATVVKSLAKAKLQFPVMTEKFE*
Ga0062386_1009420161	3300004152	Bog Forest Soil	AKYLLVSEMATSRNTTAESAEAIVVKSLAKAKLQFPVMTEKFE*
Ga0062595_1003626921	3300004479	Soil	YLLVSEMATSRNTSAESAEAIVVKSLAKAKLQFPVMTEKFE*
Ga0062595_1013778852	3300004479	Soil	LVSEMATSRNTSAESAEAIVVKSLAKAKLQFPVMTEKFE*
Ga0066683_106150192	3300005172	Soil	LVSEMATSRNTTAENAEATVVKSLAKAKLQFPIMTEKFE*
Ga0066684_106332601	3300005179	Soil	KYLLVSEMATAKNTTAESAEGMVIKSLAKAKLQFPVITEKFE*
Ga0066388_1005828412	3300005332	Tropical Forest Soil	YLLVSEMATARNTSAELAETMVLKSLAKAKLQLPVMQEGFEQ*
Ga0066703_105234902	3300005568	Soil	SEMATSRNTSAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0075019_103203572	3300006086	Watersheds	LLVSEMATARNLTAENAEGLVVKSLAKAKLQFPTMVEKFE*
Ga0070765_1012561221	3300006176	Soil	VSEMATSRNTTAESAEAIVVKSLAKAKLQFPVMTEKFE*
Ga0099793_103099421	3300007258	Vadose Zone Soil	ATSRNTTAENAEATVVKSLAKAKLQFPVLTEKFE*
Ga0099794_100652443	3300007265	Vadose Zone Soil	KYLLVSEMATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0099794_106519251	3300007265	Vadose Zone Soil	ATARNTTSESAEGLVVKSLAKAKLQFPLMTEKFE*
Ga0099795_103759671	3300007788	Vadose Zone Soil	LLVSEMATARNTTSESAEGLVVKSLAKAKLQFPLMTEKFE*
Ga0066710_1000365671	3300009012	Grasslands Soil	AKYLLVSEMATSRNTTAENAEATVVKSLAKAKLQFPVLTEKFE
Ga0099829_101894261	3300009038	Vadose Zone Soil	LLVSEMATSRNTTAENAEATVIKSLAKAKLTFPVMTEKFE*
Ga0099829_102340991	3300009038	Vadose Zone Soil	LVSEMATARNTSAESAEATVVKSLAKAKLQFPVLTENFE*
Ga0099829_115220001	3300009038	Vadose Zone Soil	LLVSEMATSRNTTAENAEATVVKSLAKAKLQFPVLTEKFE*
Ga0099828_107570101	3300009089	Vadose Zone Soil	SEMATARNTSAESAEGMVVKSLAKAKLQFPILTEKFE*
Ga0099828_113647521	3300009089	Vadose Zone Soil	MATSRNTSPESAEAVVVKSLAKAKLQFPVMTEKFE*
Ga0099827_111395521	3300009090	Vadose Zone Soil	EMATSRNTSAESAEATVVKSLAKAKLQFPIMTEKFE*
Ga0066709_1023037321	3300009137	Grasslands Soil	KYLLVSEMATSRNTSAENAEATVVKSLAKAKLTFPVMTEKSE*
Ga0066709_1033366911	3300009137	Grasslands Soil	MLECPNYLHLSKLVTSHNTSAENPEATVVKSLAKVKLQFPVLTEKFE*
Ga0105249_123385651	3300009553	Switchgrass Rhizosphere	RAKYLLVSEMATARNTSAESAEALVVKSLAKGKLTFPIMTEKFE*
Ga0126380_104369252	3300010043	Tropical Forest Soil	YLLVSEMATARNTSSESAETLVVKSLAKAKLQFPVMQEAMEQ*
Ga0126373_105050982	3300010048	Tropical Forest Soil	VSEMATARNLSAETAEVLVVKSLAKAKLQFPTMQEKVD*
Ga0134109_101275991	3300010320	Grasslands Soil	TARNLTSETAETLVVKSLAKAKLQFPVMQEAMEQ*
Ga0134109_104775432	3300010320	Grasslands Soil	YLLVSEMATSRNTTAENAEATVVKSLAKAKLQFPIMTEKFE*
Ga0134084_104773142	3300010322	Grasslands Soil	VSEMATAKNTTAESAEGMVIKSLAKAKLQFPIMTEKFE*
Ga0126370_116641701	3300010358	Tropical Forest Soil	MATARNTSAELAETMVLKSLAKAKLQLPVMQEGFEQ*
Ga0126376_119439642	3300010359	Tropical Forest Soil	EMATARNTSAELAETMVLKSLAKAKLQLPVMQEGFEQ*
Ga0126378_120396651	3300010361	Tropical Forest Soil	KYLLVSEMATAKNTTAELAEGLVVKSLAKAKLQFPIMTEKFE*
Ga0126381_1001173175	3300010376	Tropical Forest Soil	YLLVSEMATAKNTTAELAEGLVVKSLAKAKLQFPIMTEKFE*
Ga0136449_1010781832	3300010379	Peatlands Soil	LVSEMATARNLTSENAEGLVVKSLAKAKLQFPQLQEKFE*
Ga0126383_132723352	3300010398	Tropical Forest Soil	VSEMATARNTSAELAETMVLKSLAKAKLQLPVMQEGFEQ*
Ga0137392_101111091	3300011269	Vadose Zone Soil	LLVSEMATSRNTSPESAEAVVVKSLAKAKLQFPVMTEKFE*
Ga0137392_102286371	3300011269	Vadose Zone Soil	IFSEMATARNTTSESAEGLVVKPLAKAKLQFPLMTEKFE*
Ga0137392_102964121	3300011269	Vadose Zone Soil	ERAKYLLVSEMATAKNTTAELAEVLVVKSLAKAKLQFPVITEKFE*
Ga0137392_110754871	3300011269	Vadose Zone Soil	RAKYLLVSEMATSRNTTAENAEATVVKSLAKASSRFP*
Ga0137393_100967834	3300011271	Vadose Zone Soil	YLLVSEMATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0137393_103971861	3300011271	Vadose Zone Soil	RAKYLLVSEMATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0137389_103427351	3300012096	Vadose Zone Soil	MATSRNTTAESAEAIVVKSLAKANLQFPVMTENFE*
Ga0137389_103902341	3300012096	Vadose Zone Soil	LARAKYLLVSKIATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0137388_101246174	3300012189	Vadose Zone Soil	LVSEMATSRNTTAENAEATVVKSLAKAKLQFPLMTEKFE*
Ga0137388_114358741	3300012189	Vadose Zone Soil	EMSTARNTTSESAETLVVKSLAKAKLQFPLMTEKFE*
Ga0137388_119595731	3300012189	Vadose Zone Soil	MATSRNTCPESAEAVVVKSLAKAKLQFPVMTEKFE*
Ga0137364_105378212	3300012198	Vadose Zone Soil	EMATSRNTSAENAEATVVKSLAKAKLTFPIMTEKFE*
Ga0137383_100658291	3300012199	Vadose Zone Soil	MATSRNTSAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0137383_103934031	3300012199	Vadose Zone Soil	MATAKNITSELAEGLVVKSLAKAKLQFPVMTEIFNFEFRSK*
Ga0137365_101014051	3300012201	Vadose Zone Soil	MATAKNITSELAEGLVVKSLAKAKLQFPVMTEKFE*
Ga0137362_116353512	3300012205	Vadose Zone Soil	EMATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0137381_114060512	3300012207	Vadose Zone Soil	YLLVSEMATSRNTSAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0137377_111795521	3300012211	Vadose Zone Soil	ATSRNTTAENAEATVVKSLAKAKLQFPIMTEKFE*
Ga0137386_102456263	3300012351	Vadose Zone Soil	EMATSRNTSAENAEATVVKSLAKAKLQFPVLTEKFE*
Ga0137384_112713912	3300012357	Vadose Zone Soil	KYLLVSEMATSRNTSPESAEAVVVKSLAKAKLQFPVMTEKFE*
Ga0137385_104429431	3300012359	Vadose Zone Soil	LLVSEMATARNLTAENAEGLVVKSLAKAKLQFPQMQESLES*
Ga0137360_104495201	3300012361	Vadose Zone Soil	EMATSRNTTAENAEATVVKSLAKAKLQFPVMTEKFE*
Ga0137360_105248591	3300012361	Vadose Zone Soil	MATARNTTSESAEGLVVKSLAKAKLQFPLMTEKFE*
Ga0137361_103267381	3300012362	Vadose Zone Soil	LLVSEMATSRNTTAENAEATVVRSLAKAKLTFPVMTEKFE*
Ga0137390_101859503	3300012363	Vadose Zone Soil	AKYLLVSEMATSRNTSPESAEAVVVKSLAKAKLQFPVMTEKFE*
Ga0137390_117527881	3300012363	Vadose Zone Soil	MATARNTTSESAETLVVKSLAKAKLQFPLMTEKFE*
Ga0137398_105471292	3300012683	Vadose Zone Soil	AKYLLVSEMATARSTTSESAEAMVLKSLAKAKLQFPIMQEGFEQ*
Ga0137395_111534941	3300012917	Vadose Zone Soil	LLVSEMATSRNTTAENAEATVVKSLAKAKLQFPVMTEKFE*
Ga0137394_109032012	3300012922	Vadose Zone Soil	VSEMATSRNTTAENAEATVVKSLAKAKLQFPVLTEKFE*
Ga0137359_100461543	3300012923	Vadose Zone Soil	SEMATARSTSAESAEAMVLKSLAKAKLQFPIMQEGFEQ*
Ga0137419_102181701	3300012925	Vadose Zone Soil	YLLVSEMATSRNTTAENAEATVIKSLAKAKLQFPVLTEKFE*
Ga0137419_104528821	3300012925	Vadose Zone Soil	MATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE*
Ga0137419_106237922	3300012925	Vadose Zone Soil	SEMATARNTTSESAEGLVVKSLAKAKLQFPLMTEKFE*
Ga0137419_117624181	3300012925	Vadose Zone Soil	EMATARNTSAENAEATVVKSLAKAKLQFPVMTEKFE*
Ga0137404_102727333	3300012929	Vadose Zone Soil	EMATSRNTTAENAEAIVVKSLAKAKLTFPVMTEKFE*
Ga0137404_111436802	3300012929	Vadose Zone Soil	ATARSTSAESAEAMVLKSLAKAKLQFPIMQEGFEQ*
Ga0137407_122471851	3300012930	Vadose Zone Soil	YLLVSEMATSRNTTAESAEATVIKSLAKAKLQFPVLTEKFE*
Ga0137410_103417101	3300012944	Vadose Zone Soil	SEMATSRNTTAESAEAIVVKSLAKAKLQFPIMTEKFE*
Ga0164303_114695301	3300012957	Soil	LVSEMATARSTSAESAEAMVLKSLAKAKLQFPIMQEGFEQ*
Ga0126369_101337381	3300012971	Tropical Forest Soil	MATAKNTTAELAEGLVVKSLAKAKLQFPIMTEKFE*
Ga0126369_114867212	3300012971	Tropical Forest Soil	EMATAKNTSAELAEGLVVKSLAKAKLQFPVMTEKFE*
Ga0157372_115884951	3300013307	Corn Rhizosphere	KYLLVSEMATARNTSAESAEALVVKSLAKGKLTFPIMTEKFE*
Ga0181527_11405202	3300014153	Bog	VSEMATARNLTAENAEGLVVKSLAKAKLQFPQMQEKFE*
Ga0157379_101794901	3300014968	Switchgrass Rhizosphere	MATARNTSAELAEGMVLKSLAKAKLQLPVMQEGFEQ*
Ga0137420_10800601	3300015054	Vadose Zone Soil	AKYLLVSEMATSRNTTAENAEATVVKSLAKAKLQFPVLTEKFE*
Ga0137418_105285672	3300015241	Vadose Zone Soil	EMATSRNTTAENAEATVVKSLAKSKLQFPVLTEKFE*
Ga0137409_100736601	3300015245	Vadose Zone Soil	SEMATARNLTSENAEGLVVKSLAKAKLQFPQMQEALES*
Ga0137409_102584042	3300015245	Vadose Zone Soil	SEMATARNLTSENAEGLVVKSLAKAKLQFPQMQEGLES*
Ga0137403_110956792	3300015264	Vadose Zone Soil	MATSRNTTAENAEATVVKSLAKAKLQFPVLTEKFE*
Ga0182037_105584142	3300016404	Soil	AKYLLVSEMAAARNLTAETAEVLVVKSLAKAKLQFPAMQEKVD
Ga0182039_113837911	3300016422	Soil	LLVSEMATARNLTAENAEGLVVKSLAKAKLQFPQMQETLDS
Ga0187802_104480961	3300017822	Freshwater Sediment	VSEMATARNMTAETAEGLVVKSLAKAKLQFPVLQEKFE
Ga0187818_100360931	3300017823	Freshwater Sediment	EMATSRNTTAESAEAIVVKSLAKAKLQFPVMTEKFE
Ga0187818_103740091	3300017823	Freshwater Sediment	LLVSEMATSRNTTAESAEAIVVKSLAKAKLQFPVMTEKFE
Ga0187817_106216802	3300017955	Freshwater Sediment	KYLLVSEMATSRNTTAESAEAIVVKSLAKAKLQFPVMTEKFE
Ga0187780_104075442	3300017973	Tropical Peatland	LVSEMGTARNTTAESAETLVVRSLAKAKLQFPVLQETAE
Ga0187816_105545452	3300017995	Freshwater Sediment	VSEMATSRNTTAESAEAIVVKSLAKAKLQFPVMTEKFE
Ga0187862_100511094	3300018040	Peatland	LVSEMATARNLTAENAEGLVVKSLAKAKLQFPQLQEKFE
Ga0187858_100478271	3300018057	Peatland	MATARNASQENVETLLVKSLAKAKLEFPVMQEKFE
Ga0187771_100657514	3300018088	Tropical Peatland	EMATARNTSQETVETLLVKSLAKANLEFPILQENFE
Ga0066655_108562122	3300018431	Grasslands Soil	ATARSTSAESAEAMVLKSLAKAKLQFPIMQEGFEQ
Ga0066662_109050511	3300018468	Grasslands Soil	MATAKNTTSELAEGLVVKSLAKAKLQFPVMTEKFE
Ga0179590_10192631	3300020140	Vadose Zone Soil	MATARNLTSENAEGLVVKSLAKAKLQFPQMQEGLES
Ga0179594_100840291	3300020170	Vadose Zone Soil	KYLLVSEMATSRNTTAENAEATVVKSLAKAKLQFPVLTEKFE
Ga0210407_104776663	3300020579	Soil	LLVSEMATSRNTTAESAEAIVVKSLAKAKLQFPVLTEKFE
Ga0210407_106112562	3300020579	Soil	LVSEMATSRNTTAESAEAIVVKSLAKAKLQFPVMTEKFE
Ga0210403_1000052632	3300020580	Soil	SEMATARNLTSENAEGLVVKSLAKAKLQFPQMQEGLES
Ga0210399_109176431	3300020581	Soil	EMATARNTSPESAEAVVVKSLAKAKLTFPIMTEKFE
Ga0210399_112502221	3300020581	Soil	ATARNLTAENAEGLVVKSLAKAKLQFPMMQEAVEQ
Ga0179596_104809741	3300021086	Vadose Zone Soil	MATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE
Ga0210406_109072591	3300021168	Soil	AKYLLVSEMATARNTTAESAEAVVVKSLAKAKLTFPIMTEKFE
Ga0210400_107192361	3300021170	Soil	LLVSEMATARNTSAENAEATVVKSLAKAKLQFPVMTEKFE
Ga0210405_112894211	3300021171	Soil	VSEMATSRNTTAESAEAIVVKSLAKAKLQFPVLTEKFE
Ga0210384_101469394	3300021432	Soil	EMATSRNTTAESAEAIVVKSLAKAKLQFPVLTEKFE
Ga0210384_115289702	3300021432	Soil	LVSEMATSRNTTAESAEAIVVKSLAKAKLTFPVMTEKFE
Ga0210391_103492631	3300021433	Soil	LVSEMATARNLTSENAEGLVVRSLAKAKLQFPALQETVD
Ga0210390_101966551	3300021474	Soil	LVSEMATARNLTAENAEGLVVKSLAKAKLQFPTLQEKVD
Ga0210410_114839351	3300021479	Soil	LLVSEMATARNTTSESAEAIVVKSLAKAKLQFPVMTEKFE
Ga0126371_108013942	3300021560	Tropical Forest Soil	EMATAKNTTSELAEGLVVKSLAKAKLQFPIMTEKFE
Ga0242665_103748501	3300022724	Soil	LLVSEMATAQNTTSESAEGLVVKSLAKAKLQFPLMTEKFE
Ga0207641_112351702	3300026088	Switchgrass Rhizosphere	YLLVSEMATARNTSAELAETMVLKSLAKAKLQLPVMQEGFEQ
Ga0209238_10840021	3300026301	Grasslands Soil	LVSEMATARNLTSETAETLVVKSLAKAKLQFPVMQEAMEQ
Ga0209377_12674111	3300026334	Soil	YLLVSEMATSRNTTSESAESLVVKSLAKAKLQFPIMQERFE
Ga0209648_104533672	3300026551	Grasslands Soil	LVSEMATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE
Ga0179587_102188901	3300026557	Vadose Zone Soil	EMATSRNTTAENAEATVVKSLAKAKLQFPVLTEKFE
Ga0209735_11040191	3300027562	Forest Soil	YLLVSEMATSRNTTAENAEATVVKSLAKAKLQFPVMTEKFE
Ga0209799_11573352	3300027654	Tropical Forest Soil	SEMATARNTSAELAETMVLKSLAKAKLQFPVMQESMEQ
Ga0209488_105295802	3300027903	Vadose Zone Soil	ERAKYLLVSEMATSRNTTAENAEATVVKSLAKAKLTFPVMTEKFE
Ga0209069_100928582	3300027915	Watersheds	EMATARNTTSESAETLVVKSLAKAKLQFPLMTEKFE
Ga0307504_102648751	3300028792	Soil	FSELATARNTTSESAEGLVVKSLAKAKLQFPLMTEKFE
Ga0311340_113468191	3300029943	Palsa	KYLLVSEMATARNTSAENAEATVVKSLAKAKLQFPVMTESFE
Ga0170824_1027171461	3300031231	Forest Soil	SEMATARNLTAENAEGLVVKSLAKAKLQFPMMQEAVEQ
Ga0318541_104461511	3300031545	Soil	AKYLLVSEMATARNLTAETAEVLVVKSLAKAKLQFPAMQEKVD
Ga0306917_112391551	3300031719	Soil	KYLLVSEMATARNLTAETAEVLVVKSLAKAKLQFPAMQEKVD
Ga0307469_108590511	3300031720	Hardwood Forest Soil	YLLVSEMATARNTTSESAEGLVVKSLAKAKLQFPLMTEKFE
Ga0307477_100067456	3300031753	Hardwood Forest Soil	MLVSQMATARNTTPESAEGLVVKPLAKAKPQFPLMTEKFE
Ga0307475_109336961	3300031754	Hardwood Forest Soil	SEMATSRNTTAESAEAIVVKSLAKAKLQFPVLTEKFE
Ga0318547_110823591	3300031781	Soil	SEMATARNLSAETAEVLVVKSLAKAKLQFPTMQEKVD
Ga0306921_103107291	3300031912	Soil	LLVSEMATARNTSAELAETMVLKSLAKAKLQLPVLQEGFEQ
Ga0310910_100733623	3300031946	Soil	MATARNLSAETAEVLVVKSLAKAKLQFPTMQEKVD
Ga0307479_106632442	3300031962	Hardwood Forest Soil	KYLLVSEMATSRNTTAESAEAVVVRSLAKAKLQFPVMTEKFE
Ga0318505_101964742	3300032060	Soil	EMATARNLTAETAEVLVVKSLAKAKLQFPAMQEKVD
Ga0307471_1000963483	3300032180	Hardwood Forest Soil	SEMATARSTSAESAEAMVLKSLAKAKLQFPIMQEGFEQ
Ga0307471_1001783515	3300032180	Hardwood Forest Soil	LLVSEVATAQITSAESAEGLVVKSLAKAKLQFPVMTEKFE
Ga0307471_1015556921	3300032180	Hardwood Forest Soil	SEMATARNLTAETAEVLVVKSLAKAKLQFPTMQEKVD
Ga0307471_1040951931	3300032180	Hardwood Forest Soil	LLVSEMATARNLTAENAEGLVVKSLAKAKLQFPQMQEALES
Ga0335085_103348043	3300032770	Soil	MATARNMTAETAEDLVVKSLAKAKLQFPSLQEKFE
Ga0335085_115564671	3300032770	Soil	EMATARNLTAENAEGLVVKSLAKAKLQFPQMQEPLES
Ga0326728_101649001	3300033402	Peat Soil	LVSEMATARNLTAENAEGLVVKSLAKAKLQFPQMQEKFE
Ga0371488_0174370_26_133	3300033983	Peat Soil	MATARNLTAENAEGLVVKSLAKAKLQFPALQEKVD

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign