Metagenome / Metatranscriptome Family F049105

Basic Information
Family ID	F049105
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	76 residues
Representative Sequence	KLTGTFGSQLGEVPVSGTAEGKALKLTLVAQTPQGDMTVTMTGDLDGDNIVNGKAEVSGLGQMEWSAKRIKQ
Number of Associated Samples	134
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.79 %
% of genes near scaffold ends (potentially truncated)	93.88 %
% of genes from short scaffolds (< 2000 bps)	92.52 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Most Common Taxonomy
Group	Bacteria (92.517 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (7.483 % of family members)
Environment Ontology (ENVO)	Unclassified (39.456 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.701 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 56.00% Coil/Unstructured: 44.00%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
b.61.1.0: Avidin/streptavidin	d3szha_	3szh	0.79
b.61.1.0: Avidin/streptavidin	d3szha_	3szh	0.79
b.61.1.0: Avidin/streptavidin	d4z2oa_	4z2o	0.78
b.61.1.0: Avidin/streptavidin	d4z2oa_	4z2o	0.78
b.61.1.0: Avidin/streptavidin	d4bj8a_	4bj8	0.77
b.61.1.0: Avidin/streptavidin	d4bj8a_	4bj8	0.77
f.4.1.1: OMPA-like	d1qjpa_	1qjp	0.75
f.4.1.1: OMPA-like	d1qjpa_	1qjp	0.75
b.61.6.0: YceI-like	d5ixga_	5ixg	0.74
b.61.6.0: YceI-like	d5ixga_	5ixg	0.74

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF03480	DctP	42.18
PF07690	MFS_1	8.84
PF04290	DctQ	1.36
PF02738	MoCoBD_1	1.36
PF13460	NAD_binding_10	0.68
PF07161	LppX_LprAFG	0.68
PF13632	Glyco_trans_2_3	0.68
PF00069	Pkinase	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.52 %
Unclassified	root	N/A	7.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.52 %
Unclassified	root	N/A	7.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.52 %
Unclassified	root	N/A	7.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	13.61 %
Unclassified	root	N/A	7.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.36 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	13.61 %
Unclassified	root	N/A	7.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.85 %
Unclassified	root	N/A	7.48 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.85 %
Unclassified	root	N/A	7.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002JZDBV	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1908206	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13684915	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300001380\|JGI1356J14229_10150956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300001686\|C688J18823_11112423	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300002568\|C688J35102_117853027	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300003319\|soilL2_10211926	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300003574\|Ga0007410J51695_1084364	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300004081\|Ga0063454_101348365	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300004156\|Ga0062589_102054260	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005184\|Ga0066671_10849596	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005293\|Ga0065715_10517672	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005328\|Ga0070676_10918982	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005331\|Ga0070670_100402325	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300005333\|Ga0070677_10225315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	918	Open in IMG/M
3300005335\|Ga0070666_10583794	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005345\|Ga0070692_10329853	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300005347\|Ga0070668_100599010	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005366\|Ga0070659_100066010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2867	Open in IMG/M
3300005366\|Ga0070659_101855669	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300005367\|Ga0070667_100552349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1058	Open in IMG/M
3300005441\|Ga0070700_100657620	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005445\|Ga0070708_101168985	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005457\|Ga0070662_100777214	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005457\|Ga0070662_101430597	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300005467\|Ga0070706_101541664	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005468\|Ga0070707_101256709	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005471\|Ga0070698_102194468	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005538\|Ga0070731_10358135	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005541\|Ga0070733_10253191	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300005545\|Ga0070695_101638034	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005549\|Ga0070704_101138141	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005556\|Ga0066707_11023703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300005564\|Ga0070664_100150404	All Organisms → cellular organisms → Bacteria → Acidobacteria	2055	Open in IMG/M
3300005616\|Ga0068852_100580386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1124	Open in IMG/M
3300005617\|Ga0068859_103180666	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300005618\|Ga0068864_101450433	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300005618\|Ga0068864_102706223	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300005650\|Ga0075038_11209503	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005842\|Ga0068858_100237646	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300005842\|Ga0068858_100664935	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300006057\|Ga0075026_100680631	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300006176\|Ga0070765_101660628	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300006358\|Ga0068871_102095940	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006852\|Ga0075433_10307515	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300006881\|Ga0068865_101038296	Not Available	719	Open in IMG/M
3300006904\|Ga0075424_100438787	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300006914\|Ga0075436_100753192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300007255\|Ga0099791_10262732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300009012\|Ga0066710_102767267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300009012\|Ga0066710_104541831	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300009088\|Ga0099830_11184032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300009089\|Ga0099828_10096243	All Organisms → cellular organisms → Bacteria	2552	Open in IMG/M
3300009093\|Ga0105240_11809231	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300009094\|Ga0111539_11596531	Not Available	756	Open in IMG/M
3300009098\|Ga0105245_10340040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1484	Open in IMG/M
3300009098\|Ga0105245_10977966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	890	Open in IMG/M
3300009098\|Ga0105245_12878991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300009137\|Ga0066709_102353471	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300009137\|Ga0066709_102462488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300009147\|Ga0114129_12550323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300009148\|Ga0105243_10639956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1029	Open in IMG/M
3300009177\|Ga0105248_13337627	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300009553\|Ga0105249_10939362	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300009662\|Ga0105856_1079691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	937	Open in IMG/M
3300010046\|Ga0126384_11219064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300010362\|Ga0126377_13058282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300010400\|Ga0134122_10377893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1243	Open in IMG/M
3300010401\|Ga0134121_10939177	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300010403\|Ga0134123_10095582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2352	Open in IMG/M
3300010403\|Ga0134123_13178946	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300012200\|Ga0137382_10684735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300012212\|Ga0150985_117491500	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300012469\|Ga0150984_106485765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300012910\|Ga0157308_10042965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1141	Open in IMG/M
3300012912\|Ga0157306_10262671	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300012918\|Ga0137396_11235009	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300012957\|Ga0164303_10863184	Not Available	630	Open in IMG/M
3300012988\|Ga0164306_11989417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300014745\|Ga0157377_10826899	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300014745\|Ga0157377_11423900	Not Available	548	Open in IMG/M
3300015053\|Ga0137405_1348014	All Organisms → cellular organisms → Bacteria → Acidobacteria	1842	Open in IMG/M
3300015373\|Ga0132257_103066652	Not Available	608	Open in IMG/M
3300018051\|Ga0184620_10069819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300018078\|Ga0184612_10123722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1354	Open in IMG/M
3300018081\|Ga0184625_10250598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	927	Open in IMG/M
3300021078\|Ga0210381_10379637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300021178\|Ga0210408_10321543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1234	Open in IMG/M
3300022534\|Ga0224452_1172077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300022756\|Ga0222622_10071192	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300025315\|Ga0207697_10469177	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300025903\|Ga0207680_11302385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300025905\|Ga0207685_10441163	Not Available	675	Open in IMG/M
3300025908\|Ga0207643_10901694	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300025911\|Ga0207654_10612476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300025925\|Ga0207650_10698086	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300025933\|Ga0207706_10498669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1051	Open in IMG/M
3300025934\|Ga0207686_10624175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	850	Open in IMG/M
3300025938\|Ga0207704_10874075	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300025938\|Ga0207704_11575342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300025939\|Ga0207665_10884869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300025940\|Ga0207691_11118987	Not Available	655	Open in IMG/M
3300025942\|Ga0207689_11688587	Not Available	525	Open in IMG/M
3300025961\|Ga0207712_11108908	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300025981\|Ga0207640_11421879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300026023\|Ga0207677_11666221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300026035\|Ga0207703_10033070	All Organisms → cellular organisms → Bacteria	4097	Open in IMG/M
3300026088\|Ga0207641_11454253	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300026089\|Ga0207648_10040402	All Organisms → cellular organisms → Bacteria → Acidobacteria	4099	Open in IMG/M
3300026118\|Ga0207675_100064679	All Organisms → cellular organisms → Bacteria → Acidobacteria	3419	Open in IMG/M
3300026220\|Ga0209855_1004398	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300026298\|Ga0209236_1062790	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300026329\|Ga0209375_1017776	All Organisms → cellular organisms → Bacteria	4153	Open in IMG/M
3300026333\|Ga0209158_1332309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300026542\|Ga0209805_1126148	All Organisms → cellular organisms → Bacteria → Acidobacteria	1205	Open in IMG/M
3300027748\|Ga0209689_1114176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1369	Open in IMG/M
3300027882\|Ga0209590_10393970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300027903\|Ga0209488_10147498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1775	Open in IMG/M
3300028536\|Ga0137415_10967793	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300028709\|Ga0307279_10088741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300028715\|Ga0307313_10234903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300028807\|Ga0307305_10077446	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300028807\|Ga0307305_10242878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300031057\|Ga0170834_108527494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300031114\|Ga0308187_10091669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300031231\|Ga0170824_108589197	Not Available	549	Open in IMG/M
3300031231\|Ga0170824_111564761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300031544\|Ga0318534_10801900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300031716\|Ga0310813_12106388	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300031720\|Ga0307469_12408873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300031744\|Ga0306918_10440049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300031781\|Ga0318547_10964824	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300031795\|Ga0318557_10158224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1026	Open in IMG/M
3300031798\|Ga0318523_10185874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1037	Open in IMG/M
3300031820\|Ga0307473_10227799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1126	Open in IMG/M
3300031896\|Ga0318551_10386496	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300031897\|Ga0318520_10860041	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300031902\|Ga0302322_101973334	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300031938\|Ga0308175_102564351	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300031946\|Ga0310910_10301671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1260	Open in IMG/M
3300031981\|Ga0318531_10100395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1274	Open in IMG/M
3300032012\|Ga0310902_10722301	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300032059\|Ga0318533_11047184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300032205\|Ga0307472_102004199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300033412\|Ga0310810_10278895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1814	Open in IMG/M
3300034150\|Ga0364933_196093	Not Available	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.90%
Host-Associated	Host-Associated	38.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.46%
Plants	Host-Associated → Plants	38.10%
Aquatic	Environmental → Aquatic	5.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.97%
Sediment	Environmental → Aquatic → Sediment	4.08%
Freshwater	Environmental → Aquatic → Freshwater	1.36%
Peat	Environmental → Terrestrial → Peat	0.68%
Floodplain	Environmental → Terrestrial → Floodplain	0.68%
Roots	Host-Associated → Plants → Roots	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.88%
Loam	Environmental → Terrestrial → Soil → Loam	10.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.04%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.04%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.36%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.04%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.04%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.04%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.04%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.36%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003574	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026220	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063 (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_10289710	2170459003	Grass Soil	LGEVPISGTAEGKMLKLTLVAQTPQGEMTVVMTGDLDGDNIVNGKAEVSGLGQFEFSAKRIKQ
ICChiseqgaiiDRAFT_19082061	3300000033	Soil	VMLKTPGGDFPASATLTDEGGKVSGTFGSQMGEVPVNGTVEGKALKITMVAQTPQGTMTVTLTGDLDGDSIVNGKADVEGMGQMEWSAKRVKP*
ICChiseqgaiiFebDRAFT_136849151	3300000363	Soil	MLKTPGGDFPASATLTDEGGKVSGTFGSQMGEVPVNGTVEGKALKITMVAQTPQGTMTVTLTGDLDGDSIVNGKADVEGMGQMEWSAKRVKP*
JGI1356J14229_101509562	3300001380	Groundwater	RWDVMLKTPGGDFPATATLNETSGALSGTLGSQMGEVPVTGSVDGKAVKISMVAQTPQGDLTVVMTGELDGDSIVNGKAEIAGMGQMEWSAKRIKQ*
C688J18823_111124232	3300001686	Soil	LTDENGKVSGTFGSQLGEVPIAGTAEGKALKITMVAQTPQGDMTVVMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ*
C688J35102_1178530271	3300002568	Soil	LTDDNGKLSGTFGSQLGEVPLAGTAEGKALKLTIVAQTPQGDMTVTMTGDLDGDNIVNGKAEIAGLGQMEWSAKRIKQ*
soilL2_102119262	3300003319	Sugarcane Root And Bulk Soil	GTFGSQMGDVPVTGVVDGKSVKLTMTAQTPSGAMNVTLTGDLDGDSIVNGKADIEGMGQMEWSAKRIKP*
Ga0007410J51695_10843642	3300003574	Avena Fatua Rhizosphere	VTLKTPAGDFPASANLTEDAGKLSGNFGSQMGEVPVTGTVEGSAMKVTFNAQTPQGPMTVVLTGDLDGDSIVNGKAEVAGMGQMEWTAKR
Ga0063454_1013483652	3300004081	Soil	DDNGKLSGTFGSQLGEVPVSGTSEGKALKLTLVAQTPQGDMTVVLTGDLDGDNIVNGKADVSGLGQMEWSAKRIKQ*
Ga0062589_1020542602	3300004156	Soil	FPANANLAVDGGKLTGTFGSQMGEVPVEGTVEGNAMKIVMNAQTPQGPMTVVLTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ*
Ga0066671_108495961	3300005184	Soil	EDAGKLSGTFGSQMGEVPVVGTIEGKAMKVTMTAQTPQGPMSVVMTGDLDGDSIVNGNAEVAGMGQMEWTAKRIKQ*
Ga0065715_105176722	3300005293	Miscanthus Rhizosphere	TGTFGSPMGEVPVTGTIDGKALKLTVEAQTPQGAMTVIMTGDIDGDTIVNGKAEIAGVGQMEWTAKRAKQ*
Ga0070676_109189821	3300005328	Miscanthus Rhizosphere	FGSQMGEVPVTGTVDGKSMKLTMSAQTPNGNMTVVLTGDLDGDSIVNGKADIEGMGQMEWTAKRIKP*
Ga0070670_1004023252	3300005331	Switchgrass Rhizosphere	PAGDMPANATLSETDGKLTGTFSSQVGEVPVSGSAEGKLLKLTFIAQTPNGDMTVNMTGDLDGDNIVNGKAEVSGLGSMEWSAKRIKQ*
Ga0070677_102253151	3300005333	Miscanthus Rhizosphere	DTAGKITGTFASQMGEVAVTGTVEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRVKQ*
Ga0070666_105837941	3300005335	Switchgrass Rhizosphere	GTFGSQMGEVPVEGTVEGNAMKITMNAQTPQGPMTVILTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ*
Ga0070692_103298531	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	FPATASLVDEGGKLTGTFGSQMGEVPVTGVVDGKSVKLTMTAQTPSGAMNVTLTGDLDGDSIVNGKADIEGMGQMEWSAKRIKP*
Ga0070668_1005990102	3300005347	Switchgrass Rhizosphere	GKWDVLLITPGGEFPATASLTDTAGKITGTFASQMGEVAVTGTVEGKALKMTMVAQTPQGEMTVVLTGDVDGDTIVNGQADVPGVGAMPWSAKRVKQ*
Ga0070659_1000660101	3300005366	Corn Rhizosphere	GEFPATASLTDTAGKITGTFASQMGEVAVTGTVEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRVKQ*
Ga0070659_1018556692	3300005366	Corn Rhizosphere	GSQLGEVPIAGTSEGKALKVTMVAQTPQGDMTVVMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ*
Ga0070667_1005523492	3300005367	Switchgrass Rhizosphere	VAIAGTAEGKALKLTMVAQTPQGDMTVVLTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ
Ga0070700_1006576201	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	EVPVEGTVEGAAMKVTFNAQTPQGPMTVVLTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ*
Ga0070708_1011689851	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	NVTDEGGKLTGTFASQMGEVPITGTLEGKALKISMVAKTPQGDMNVEMTGDLDGDSIVNGKAEIAGMGQMEWTAKRVRP*
Ga0070662_1007772141	3300005457	Corn Rhizosphere	TGTFGSPMGEVPVTGTIDGKALKLTVEAQTPQGAMTVIMTGDIDGDTIVNGKADIAGVGQMQWTAKRAKQ*
Ga0070662_1014305971	3300005457	Corn Rhizosphere	GTFGSQMGEAPVTGTVAGKALTMKMSAQTPNGVLNVTMTGDLDGDSIVNGKADVEGMGQMEWSAKRVKP*
Ga0070706_1015416642	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EFPATANLIDDAGKLSGTFGSQMGEVPVTGTLEGKALKLTMVAKTPQGDLTVEMTGDIDGDAIVNGKAEIAGMGQMEWSAKRSKQ*
Ga0070707_1012567091	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DEGGKLTGTFASQMGEVPITGTLEGKALKISMVAKTPQGDMNVEMTGDLDGDSIVNGKAEIAGMGQMEWTAKRVRP*
Ga0070698_1021944682	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	FGSPMGEVPVTGTIDGKALKLTVEAQTPQGAMTVIMTGDIDGDTILNGKAEIAGMGQMQWTAKRAKQ*
Ga0070731_103581351	3300005538	Surface Soil	AMGEAPVTGSVAGKSLKLKLNAQTPQGEMQVDMTGDIDGDTIVNGKAEVMGMQLEWTAKRIKQ*
Ga0070733_102531912	3300005541	Surface Soil	NGKWDVMLQTPGGDMPASATITDDGGKISGTFGSQLGEVPLTGSLTGKALKLSITAQTPNGDLQVTLTGDWEGDAIVNGSADVAGLGQMTWSAKRAKQ*
Ga0070686_1015493672	3300005544	Switchgrass Rhizosphere	AAAPTASTATTAGGGFSGKWDVMLKTPGGEFPANATLTDEGGKLSGTSGSQMGEVPVNGTVEGKALKITMVAQTPQGTMNVVLTGDLDGDSIVNGKADIEGMGQMEWTAKRVKQ*
Ga0070695_1016380342	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	TFAGPMGDVPVSGALEGHALKVTMTAQTPQGPMTVVLTGDIDGDTIANGKADVAGMGQMEWTAKRTKQ*
Ga0070704_1011381411	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LTGTFGSQMGEVPVTGVVDGKSVKLTMTAQTPSGAMNVTLTGDLDGDSIVNGKADIEGMGQMEWSAKRIKP*
Ga0066707_110237031	3300005556	Soil	GTFGSQMGEAPVEGTIEGHAFKITMTAQTPQGAMTVVMTGDVEGDAITHGKAEIAGMGQMEWSAKRSKQ*
Ga0070664_1001504041	3300005564	Corn Rhizosphere	VMLKTPAGDMPANATLSETDGKLTGTFSSQVGEVPVSGSAEGKLLKLTFIAQTPNGDMTVNMTGDLDGDNIVNGKAEVSGLGTMEWSAKRIKQ*
Ga0068852_1005803861	3300005616	Corn Rhizosphere	VTPGGEFPATASLTDTAGKITGTFASQMGEVAVTGTVEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRVKQ*
Ga0068859_1031806661	3300005617	Switchgrass Rhizosphere	EGGKLSGTFGSQMGEVPVNGTVDGKAMKITMVAQTPQGTMNVVLTGDLDGDSIVNGKADIEGMGQLEWTGKRIKP*
Ga0068864_1014504332	3300005618	Switchgrass Rhizosphere	ANATLTDDNGKLSGTFGSQLGEVPVAGTVEGKALKLTMTAQTPQGDLAVVMTGDLDGDNIVNGKAEVSGLGSMEWSAKRIKQ*
Ga0068864_1027062232	3300005618	Switchgrass Rhizosphere	LSDTNGQVAGTFGSQLGEVPVTGSAEGKALKLTMVAQTPNGDMTVVMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ*
Ga0075038_112095032	3300005650	Permafrost Soil	LKDENGKVSGTFGSQMGEVAITGSAEGKALKLTMVAQTPQGDMTVVLTGDLDGDTIVNGKADVSGMGMMEWSAKRIKQ*
Ga0068858_1002376461	3300005842	Switchgrass Rhizosphere	LTDEGGKLSGTFGSQMGEVPVNGTVEGKALKITMVAQTPQGTMNVVLTGDLDGDSIVNGKADIEGMGQMEWTAKRVKQ*
Ga0068858_1006649352	3300005842	Switchgrass Rhizosphere	MGEVAVNGTVEGKAVKMTMEAQTPQGNMTVIMTGDIDGDSIVNGKAEIAGMGQMEWTAKRARQ*
Ga0075026_1006806311	3300006057	Watersheds	VSGTFGSQLGEVPVSGTTEGKALKLTLVAQTPQGDLTVTMTGDLDGDNIVNGKAEVSGLGQMEWSAKRIKQ*
Ga0070765_1016606282	3300006176	Soil	GSQLGEIPVAGTVEGKALKLTMTAQTPQGEMNVVMTGDLEGDDIVNGKAEVSGLGSMEWSAKRIKQ*
Ga0068871_1020959401	3300006358	Miscanthus Rhizosphere	SQMGEVAVTGTLEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRSKQ*
Ga0075433_103075153	3300006852	Populus Rhizosphere	DLPASATLTEESGKISGTFGSQMGEVPVTGTVEGKAMKLTLVAQTPQGNMTVMMTGDIDGDSIVNGKAEIAGLGQMEWSAKRAKQ*
Ga0068865_1010382961	3300006881	Miscanthus Rhizosphere	AGKISGTFASQMGEVAVTGTLEGKALKMTMVAQTPQGDMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRSKQ*
Ga0075424_1004387871	3300006904	Populus Rhizosphere	QMGEVPVSGSLEGIAIKLSMVAQTPQGAMTVAMTGDLDGDTIINGKADIAGMGQMKWSAKRIKQ*
Ga0075436_1007531921	3300006914	Populus Rhizosphere	SGTFGSAMGEAPVSGTIEGHTLKLTMTAQTPQGAMTVVLTGDVDGDAIANGKADVAGMGQMEWTAKRMKP*
Ga0099791_102627321	3300007255	Vadose Zone Soil	TLKTPGGDFPATANFTEEGGKLTGTFGSQMGEVPVTGTVEGKALKLTMVAKTPQGDLTVEMSGDIDGDSIVNGKAEIAGMGQMEWTAKRAKQ*
Ga0066710_1027672671	3300009012	Grasslands Soil	GTAGQWSGTIGSQMGEVPVAGTVEGSSLKLTMTAQTPQGSMTVVLTGDVEGDAIVHGKAEIAGMGQMEWSAKRAKP
Ga0066710_1045418312	3300009012	Grasslands Soil	AKLTEDAGAIKGTFGSQMGEVPVTGTHEGKSVKLSMTAQTPNGEMSVVMTGEIDGDTIVNGKAEIAGMGQMEWTAKRKP
Ga0099830_111840321	3300009088	Vadose Zone Soil	GEFPANATLKEDAGKVSGTFGSQMGEVRVEGTIEGTAIKITMTAQTPQGAMTVVLTGDVEGDAITHGKAEIAGMGQMEWSARRSKQ*
Ga0099828_100962431	3300009089	Vadose Zone Soil	TFGSQMGEAAVSGTIEGQALKITMTAQTPQGAMTVVMTGDVEGDAIVHGKAEIAGMGQMEWSAKRAKP*
Ga0105240_118092312	3300009093	Corn Rhizosphere	AGDMPANATLSDTNGKLSGTFGSQLGEVPVSGTAEGKALKLTMVAQTPQGDMTVVLTGDLDGDNIVNGKAEVSGLGTMEWTAKRIKQ*
Ga0111539_115965311	3300009094	Populus Rhizosphere	VLLVTPGGEFPATASLTDNAGKITGTFASQMGEVAVTGTLEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQAEVPGIGAMPWSAKRAKQ*
Ga0105245_103400402	3300009098	Miscanthus Rhizosphere	GTFGSQMGEVPVTGVVDGKSVKLTMTAQTPTGAMNVTLTGDLDGDSIVNGKADIEGMGQMEWSAKRIKP*
Ga0105245_109779661	3300009098	Miscanthus Rhizosphere	KLTGTFGSQLGEVPVSGTAEGKALKLTLVAQTPQGDMTVTMTGDLDGDNIVNGKAEVSGLGQMEWSAKRIKQ*
Ga0105245_128789912	3300009098	Miscanthus Rhizosphere	GTFGSQMGEVPVNGTVEGKALKIIMVAQTPQGTMNVVLTGDLDGDSIVNGKADIEGMGQMEWTAKRVKQ*
Ga0066709_1023534712	3300009137	Grasslands Soil	VLLTPGGEVPATATLTDSSGKISGTFGSQMGEVPISGTMEGKSLKMTMVAQTPQGELTVILTGDLDGDAIVNGKADVAGMGQMEWSAKRTKQ*
Ga0066709_1024624881	3300009137	Grasslands Soil	VPLTATLTDTAGKLSGTLGGPMGDAVVSGTYEGKAIKMTLVAQTPQGEMNVVMTGDIDGDSIVNGQAEIAGMGTMAWSAKRAKQ*
Ga0114129_125503231	3300009147	Populus Rhizosphere	LTDEGGKLTGTFGTQMGEVPVSGSLEGNAIRLSMVAQTPQGAMNVAMTGDLDGDTIINGKADIAGMGQMEWSAKRIKQ*
Ga0105243_106399562	3300009148	Miscanthus Rhizosphere	PAGDFPATANLTDEGGKLSGTFASQMGEVPVTGVVEGKSVKLTMNAQTPNGNMTVVLTGDLDGDSIVNGKADIEGMGQLEWTGKRIKP*
Ga0105248_133376271	3300009177	Switchgrass Rhizosphere	PVTGSAEGKALKLTMVAQTPNGDMTVVMTGDLDGDNIVNGKAEVSGLGQMEWSAKRIKQ*
Ga0105249_109393622	3300009553	Switchgrass Rhizosphere	GTFGSQLGEVAIAGTAEGKALKLTMVAQTPQGDMTVVLTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ*
Ga0105856_10796911	3300009662	Permafrost Soil	NATLKDDNGKVSGTFGSQMGEVPITGSVEGKALKLTMVAQTPQGDMTVILTGDLDGDSIVNGKADVSGMGMMEWSAKRIKQ*
Ga0126384_112190641	3300010046	Tropical Forest Soil	TFGSQMGEVPVEGTIEGNAMKVTMTAQTPQGPMTVVLTGDLDGDAIVNGKAEVAGMGQMEWTAKRIKQ*
Ga0126377_130582822	3300010362	Tropical Forest Soil	GEVPVTGTIEGKALKLSMVAKTPQGDITVELSGDVDGDSIVNGKADIAGMGQMEWTAKRAKQ*
Ga0134122_103778931	3300010400	Terrestrial Soil	SQLGEVPVSGTAEGKALKLTLVAQTPQGDMTVTMTGDLDGDNIVNGKAEVSGLGQMEWSAKRIKQ*
Ga0134121_109391772	3300010401	Terrestrial Soil	DGGKLTGTFGSQMGEVPVTGVVDGKSMKLTMTAQTPSGAMNVTLTGDLDGDSIVNGKADIEGMGQMEWSAKRIKP*
Ga0134123_100955823	3300010403	Terrestrial Soil	EVPVTGVVDGKSVKLTMTAQTPTGAMNVTLTGDLDGDSIVNGKADIEGMGQMEWSAKRIKP*
Ga0134123_131789461	3300010403	Terrestrial Soil	LTDTAGKISGTFASQMGEVAVTGTVEGKALKMTMVAQTPQGEMTVVLTGDVDGDTIVNGQADVPGVGAMPWSAKRVKQ*
Ga0137382_106847352	3300012200	Vadose Zone Soil	EVPVTGTIDGKALKLTVEAQTPQGAMTVIMTGDIDGDTILNGKAEIAGMGQMEWTAKRAKQ*
Ga0150985_1174915001	3300012212	Avena Fatua Rhizosphere	SDDNGKLSGTFGSQLGEVPVSGTSEGKALKLTLVAQTPQGDMTVVLTGDLDGDNIVNGKADVSGLGQMEWSAKRIKQ*
Ga0150984_1064857652	3300012469	Avena Fatua Rhizosphere	AGKLSGNFGSQMGEVPVTGTVEGSAMKVTFNAQTPQGPMTVVLTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ*
Ga0157308_100429652	3300012910	Soil	PANATLTDEGGKVSGTFGSQMGEAPVTGTVEGKALKIKMAAQTPNGVLNVTMTGDLDGDSIVNGKADVEGMGQMEWSAKRVKP*
Ga0157306_102626712	3300012912	Soil	PASATLTDEGGKVSGTFGSQMGEAPVTGTVEGKALKIKMAAQTPNGVLNVTMTGDLDGDSIVNGKADVEGMGQMEWSAKRVKP*
Ga0137396_112350092	3300012918	Vadose Zone Soil	VTLLTPGGEFPANATLKEEAGKVSGTFGSQMGEAAVEGTIEGTALKITMTAQTPQGAMTVIMTGDVEGDAITHGKAEIAGMGQMEWSAKRSKQ*
Ga0164303_108631842	3300012957	Soil	GTFASQMGEVAVTGTLEGKALKMTMVAQTPQGDMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRAKQ*
Ga0164306_119894171	3300012988	Soil	QMGEVPVEGTVEGNAMKITMNAQTPQGPMTVILTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ*
Ga0157377_108268992	3300014745	Miscanthus Rhizosphere	TFSSQVGEVPVSGSAEGKLLKLTFIAQTPNGDMTVNMTGDLDGDNIVNGKAEVSGLGSMEWSAKRIKQ*
Ga0157377_114239002	3300014745	Miscanthus Rhizosphere	EVAVTGTVEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRVKQ*
Ga0137405_13480143	3300015053	Vadose Zone Soil	MGEAPVTGSVEGKAVKMTMVAQTPQGEMTVVMTGDLDGDAIVNGKADVSGMGQMEWTAKRVKP*
Ga0132257_1030666521	3300015373	Arabidopsis Rhizosphere	LVTPGGEFPATASLTDNAGKITGTFASQMGEVAVTGTLEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQAEVPGIGAMPWSAKRAKQ*
Ga0184620_100698192	3300018051	Groundwater Sediment	FAGPMGEVPVTGTIDGKALKLTVEAQTPQGAMTVIMTGDIDGDTILNGKAEIAGVGQMQWTAKRAKQ
Ga0184612_101237221	3300018078	Groundwater Sediment	TLTDTAGKISGTFGSQMGEVAVTGTVEGKAIKMTMVAQTPQGEMTVVMTGDVEGDSIVNGMAEIAGMGQMAWSAKRAKQ
Ga0184625_102505981	3300018081	Groundwater Sediment	TFASQMGEVAVTGTLEGKALKMTMVAQTPQGDMTVVLTGDVDGDAIVNGQAEVPGVGAMPWSAKRAKQ
Ga0210381_103796372	3300021078	Groundwater Sediment	AGPMGEVPVTGTIDGKALKLTVEAQTPQGAMTVIMTGDIDGDTILNGKAEIAGMGQMQWTAKRAKQ
Ga0210408_103215431	3300021178	Soil	SGTFGSQLGEVPVAGTVEGKALKLTMTAQTPQGDMNVVMTGDLDGDNIVNGKAEVSGLGSMEWSAKRIKQ
Ga0224452_11720771	3300022534	Groundwater Sediment	TLTDEGGKLSGTFGSQMGEVPVNGTVEGKALKITMVAQTPQGTMNIVLTGDLDGDSIVNGKADIEGMGQMEWTAKRVKQ
Ga0222622_100711923	3300022756	Groundwater Sediment	GGKVSGMFGSQMGEVPITGTVEGKALTIKMTAQTPNGAMNVTMTGDLDGDSIVNGKADIEGMGQMEWSAKRVKP
Ga0207697_104691772	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	ANLTDDGGKLSGTFGSQMGEVPVTGTVEGKSMKLTMSTQTPNGTMTVVLTGDLDGDSIVNGKAEIEGMGQMEWTAKRIKP
Ga0207680_113023851	3300025903	Switchgrass Rhizosphere	AVDGGKLTGTFGSQMGEVPVEGTVEGNAMKITMNAQTPQGPMTVILTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ
Ga0207685_104411631	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	ATATLTDTAGKISGTFASQMGEVAVTGTLEGKALKMTMVAQTPQGDMTVVLTGDVDGDAIVNGQAEVPGVGAMPWSAKRTKQ
Ga0207643_109016941	3300025908	Miscanthus Rhizosphere	GGKWDVMLKTPAGDMPANATLSETDGKLTGTFSSQVGEVPVSGSAEGKLLKLTFIAQTPNGDMTVNMTGDLDGDNIVNGKAEVSGLGSMEWSAKRIKQ
Ga0207654_106124761	3300025911	Corn Rhizosphere	VTLKTPAGDFPANANLAVDGGKLTGTFGSQMGEVPVEGTVEGAAMKVTFNAQTPQGPMTVVLTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ
Ga0207650_106980861	3300025925	Switchgrass Rhizosphere	VMLKTPAGDMPANATLSETDGKLTGTFSSQVGEVPVSGSAEGKLLKLTFIAQTPNGDMTVNMTGDLDGDNIVNGKAEVSGLGSMEWSAKRIKQ
Ga0207706_104986691	3300025933	Corn Rhizosphere	ATANLTDDGGKLSGTFGSQMGEVPVTGTVEGKSMKLTMSTQTPNGTMTVVLTGDLDGDSIVNGKAEIEGMGQMEWTAKRIKP
Ga0207686_106241752	3300025934	Miscanthus Rhizosphere	TFGSQLGEVPVSGTAEGKALKLTLVAQTPQGDMTVTMTGDLDGDNIVNGKAEVSGLGQMEWSAKRIKQ
Ga0207704_108740751	3300025938	Miscanthus Rhizosphere	FGSQLGEVPVSGTAEGKMLKLTLVAQTPQGELTVTMTGDLDGDNIVNGKAEVSGLGQMEWSAKRIKQ
Ga0207704_115753422	3300025938	Miscanthus Rhizosphere	GDFPANATLTDEGGKLSGTFGSQMGEAQVAGTSEGKALKITMVANTPQGAMTVVMTGDLAGDEIVNGKAEVEGLGQMEWTAKRVKQ
Ga0207665_108848692	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	SATLAEDAGKVSGTFGSPMGEVPVSGTLEGHALKITMTAQTPQGAMTVVLTGDIDGDTIANGKAEVAGMGQMEWTAKRSKP
Ga0207691_111189871	3300025940	Miscanthus Rhizosphere	SLTDTAGKITGTFASQMGEVAVTGTVEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRVKQ
Ga0207689_116885872	3300025942	Miscanthus Rhizosphere	GEVAVTGTVEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRVKQ
Ga0207712_111089081	3300025961	Switchgrass Rhizosphere	FPASATLTDEGGKVSGTFGSQMGEAPVTGTVEGKALKIKMAAQTPNGVLNVTMTGDLDGDSIVNGKADVEGMGQMEWSAKRVKP
Ga0207640_114218791	3300025981	Corn Rhizosphere	PVTGTIDGKALKLTVEAQTPQGAMTVIMTGDIDGDTIVNGKADIAGVGQMQWTAKRAKQ
Ga0207677_116662212	3300026023	Miscanthus Rhizosphere	QMGEVPVAGTIEGKAVKLTMEAQTPQGAMTVVLTGDIDGDAILNGKAEIAGMGQMEWTAKRARQ
Ga0207703_100330701	3300026035	Switchgrass Rhizosphere	KLSGTFGSQLGEVPVSGTSEGKALKLTLIAQTPQGDMTVVMTGDLDGDNIINGKAEVSGLGTMEWSAKRIKQ
Ga0207641_114542531	3300026088	Switchgrass Rhizosphere	ANATLTDDNGKLSGTFGSQLGEVPVAGTVEGKALKLTMTAQTPQGDLAVVMTGDLDGDNIVNGKAEVSGLGSMEWSAKRIKQ
Ga0207648_100404025	3300026089	Miscanthus Rhizosphere	RNEWPCMRRHLWPSGTFGSQLGEVPVSGTAEGKALKLTLVAQTPQGDMTVTMTGDLDGDNIVNGKAEVSGLGQMEWSAKRIKQ
Ga0207675_1000646794	3300026118	Switchgrass Rhizosphere	GKLTGTFGSQMGEVPVEGTVEGNAMKITMNAQTPQGPMTVILTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ
Ga0209855_10043981	3300026220	Permafrost Soil	GEVAITGSAEGKALKLTMVAQTPQGDMTVVLTGDLDGDTIVNGKADVSGMGMMEWSAKRIKQ
Ga0209236_10627901	3300026298	Grasslands Soil	TFTDEGGKLTGTFGSQMGEVPVTGTVEGKALKLTMVAKTPQGDLTIEMSGDIDGDAIVNGKADIAGMGQMEWTAKRAKQ
Ga0209375_10177761	3300026329	Soil	ANLTDDGGKLTGTFGSQMGEVAITGTVEGKAVKISMVARTPQGDLNVEMTGDLDGDSIVNGKAEVAGMGQMEWTAKRAKP
Ga0209158_13323091	3300026333	Soil	GKLSGTFGSPMGEVPVSGSLDGKVITLTMVAQTPQGAMNVAMTGDLAGDTIVNGKADVAGMGQMEWSAKRIKQ
Ga0209805_11261482	3300026542	Soil	MGEVPVSGSLDGKVITLTMVAQTPQGAMNVAMTGDLAGDTIVNGKADVAGMGQMEWSAKRIKQ
Ga0209689_11141763	3300027748	Soil	GGKLSGTFGSPMGEVPVSGSLDGKVITLTMVAQTPQGAMNVAMTGDLAGDTIVNGKADVAGMGQMEWSAKRIKQ
Ga0209590_103939702	3300027882	Vadose Zone Soil	GDFPATANFTEEGGKLTGTFGSQMGEVPVTGTVEGKALKLTMVAKTPQGDLTVEMSGDIDGDSIVNGKAEIAGMGQMEWTAKRAKQ
Ga0209488_101474983	3300027903	Vadose Zone Soil	DFPANATLTEDGGKLSGTFGSPMGEVPVNGTIEGKALKITMVAQTPQGSMTVVMTGDLDGDSIVNGKADVEGMGQMEWTAKRVKQ
Ga0137415_109677931	3300028536	Vadose Zone Soil	TLNDDNGKLSGTFGSQLGEVPVAGTVEGKALKLTMTAQTPQGDLNVVMTGDLDGDNIVNGKAEVSGLGSMEWSAKRIKQ
Ga0307279_100887411	3300028709	Soil	PVTGTIDGKALTLTVQAQTPQGAMTVIMTGDIDGDTIVNGKAEIAGMGQMEWSAKRAKQ
Ga0307313_102349031	3300028715	Soil	GDFPANATLTDEGGKLSGTFGSAIGEVPVNGTVEGKALKITMVAQTPQGSMTVVMTGDLDGDSIVNGKADIEGMGQMEWTAKRVKQ
Ga0307305_100774463	3300028807	Soil	GEAAITGTVEGKAVKISMVAKTPQGDLNVEMTGDLDGDSIVNGKAEVAGMGQMEWTARRAKQ
Ga0307305_102428782	3300028807	Soil	FGSAMGEVPVNGTVEGKSLKITMVAQTPQGTMNVVMTGDLDGDSIVNGKADIEGMGQMEWTAKRVKQ
Ga0170834_1085274941	3300031057	Forest Soil	GTFGSQLGEVPLTGSLAGKAVKLSMVAQTPQGDLTVEMTGDLDGDSIVNGKADIVGIGQLEWSAKRVKQ
Ga0308187_100916692	3300031114	Soil	PMGEVPVTGTIDGKALKLTVEAQTPQGAMTVIMTGDIDGDTILNGKAEIAGMGQMQWTAKRAKQ
Ga0170824_1085891972	3300031231	Forest Soil	DVLLVTPGGEFPATATLTDTAGKISGTFASQMGEVAVTGTLEGKALKMTMVAQTPQGEMTVVLTGDVDGDAIVNGQADVPGVGAMPWSAKRAKQ
Ga0170824_1115647611	3300031231	Forest Soil	FGSQLGEVPLTGSLAGKAVKLSMVAQTPQGDLTVEMTGDLDGDSIVNGKADIVGIGQLEWSAKRVKQ
Ga0318534_108019001	3300031544	Soil	VSGTFGSQMGEVPVTGTVDGKSLKLSMTAQTPNGALDVTLTADLDGDSLVNGKADVSGMGQMEWSAKRARQ
Ga0310813_121063881	3300031716	Soil	DFPASANLAVDGGKLTGTFGSQMGEVPVEGTVEGNAMKITLSAQTPQGPMSVVLTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ
Ga0307469_124088731	3300031720	Hardwood Forest Soil	DGGKLSGTFGSQMGEVPVEGTVEGNAMKITMNAQTPQGPMTVVLTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ
Ga0306918_104400492	3300031744	Soil	SKVSGTFGSQMGEVPVTGTVDGKSLKLSMTAQTPNGALDVTLTADLDGDSLVNGKADVSGMGQMEWSAKRARQ
Ga0318547_109648242	3300031781	Soil	NGKLSGTFGSQLGEVPVSGTAEGKMLKLTLVAQTPQGELTVTMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ
Ga0318557_101582241	3300031795	Soil	SQLGEVPVSGTAEGKMLKLTLVAQTPQGELTVTMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ
Ga0318523_101858742	3300031798	Soil	MPANATLSDDNGKLSGTFGSQLGEVPVSGTAEGKMLKLTLVAQTPQGELTVTMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ
Ga0307473_102277992	3300031820	Hardwood Forest Soil	AGKVSGTFGSPMGEVPVSGTLEGHALKITMTAQTPQGAMTVVMTGDIDGDTIANGKAEVAGMGQMEWTAKRSKP
Ga0318551_103864962	3300031896	Soil	GEVPVSGTAEGKMLKLTLVAQTPQGELTVTMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ
Ga0318520_108600411	3300031897	Soil	LSDDNGKLSGTFGSQLGEVPVSGTAEGKMLKLTLVAQTPQGELTVTMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ
Ga0302322_1019733342	3300031902	Fen	TGFGGKWDVMLRTPAGDMPANATLKDDMGKVSGTFGSQMGEVPVAGTAEGKVLKITMVAQTPNGDLTVVLTGDLDGDAIVNGKADVAGMGQMDWSAKRIKQ
Ga0308175_1025643512	3300031938	Soil	AGDMPANATLTDAGGKVSGTFGSQLGEVPISGTSEGNALKITMIAQTPNGDMTVTMTGDLDGDNIVNGKADVAGMGQMEWSAKRIKQ
Ga0310910_103016711	3300031946	Soil	LSGTFGSQLGEVPVSGTAEGKMLKLTLVAQTPQGELTVTMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ
Ga0318531_101003952	3300031981	Soil	ATLSDDNGKLSGTFGSQLGEVPVSGTAEGKMLKLTLVAQTPQGELTVTMTGDLDGDNIVNGKAEVAGLGQMEWSAKRIKQ
Ga0310902_107223012	3300032012	Soil	NGKWDVLLVTPGGEFPATATLTDNAGKISGTFASQMGEVAVAGTLEGKALKMTMVAQTPQGEMTVVLTGDVDGDTIVNGQADVPGVGAMPWSAKRAKQ
Ga0318533_110471842	3300032059	Soil	SGTFASQLGQVPVSGTLDGTTVKLSLVAESPQGSMSVAMTGELAGDAIVKGTADVSGMGQMEWSAKRTKQ
Ga0307472_1020041992	3300032205	Hardwood Forest Soil	GDVPVSGALEGHALKVTMTAQTPQGPMTVVLTGDIDGDTIANGKADVAGMGQMDWTAKRTKQ
Ga0310810_102788951	3300033412	Soil	PASANLAVDGGKLTGTFGSQMGEVPVEGTVEGNAMKITLNAQTPQGPMAVVLTGDLDGDSIVNGKAEVAGMGQMEWTAKRIKQ
Ga0364933_196093_273_530	3300034150	Sediment	PATATLTDTAGKISGTFASQMGEVAVTGTLEGKALKMTMVAQTPQGDMTVVLTGDVDGDAIVNGQAEVPGVGAMPWSAKRAKQQN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049105

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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