NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F049048

Metagenome Family F049048

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F049048
Family Type Metagenome
Number of Sequences 147
Average Sequence Length 41 residues
Representative Sequence HRHSGVVLVSNFFLGLHVPRVKETPSLGFSGEGLLLSEV
Number of Associated Samples 68
Number of Associated Scaffolds 144

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 14.58 %
% of genes near scaffold ends (potentially truncated) 96.60 %
% of genes from short scaffolds (< 2000 bps) 97.96 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(88.435 % of family members)
Environment Ontology (ENVO) Unclassified
(91.837 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(91.837 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.87%    β-sheet: 0.00%    Coil/Unstructured: 73.13%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005718|Ga0068866_11326784Not Available524Open in IMG/M
3300005840|Ga0068870_10591677Not Available753Open in IMG/M
3300005840|Ga0068870_10882302Not Available630Open in IMG/M
3300006237|Ga0097621_102354302Not Available510Open in IMG/M
3300011119|Ga0105246_10964175Not Available769Open in IMG/M
3300013296|Ga0157374_12322828Not Available563Open in IMG/M
3300013297|Ga0157378_11429173Not Available735Open in IMG/M
3300013297|Ga0157378_12436263Not Available575Open in IMG/M
3300013297|Ga0157378_12442853Not Available574Open in IMG/M
3300013297|Ga0157378_13187670Not Available509Open in IMG/M
3300015267|Ga0182122_1046003Not Available572Open in IMG/M
3300015267|Ga0182122_1062040Not Available525Open in IMG/M
3300015268|Ga0182154_1023588Not Available688Open in IMG/M
3300015268|Ga0182154_1025674Not Available673Open in IMG/M
3300015268|Ga0182154_1047292Not Available571Open in IMG/M
3300015269|Ga0182113_1020703Not Available792Open in IMG/M
3300015269|Ga0182113_1038035Not Available667Open in IMG/M
3300015269|Ga0182113_1067864Not Available562Open in IMG/M
3300015269|Ga0182113_1070835Not Available555Open in IMG/M
3300015269|Ga0182113_1080894Not Available533Open in IMG/M
3300015274|Ga0182188_1017788Not Available696Open in IMG/M
3300015275|Ga0182172_1061818Not Available537Open in IMG/M
3300015277|Ga0182128_1077217Not Available507Open in IMG/M
3300015279|Ga0182174_1027404Not Available700Open in IMG/M
3300015281|Ga0182160_1018975Not Available762Open in IMG/M
3300015281|Ga0182160_1021318Not Available739Open in IMG/M
3300015282|Ga0182124_1013678Not Available826Open in IMG/M
3300015283|Ga0182156_1043251Not Available620Open in IMG/M
3300015286|Ga0182176_1015496Not Available863Open in IMG/M
3300015286|Ga0182176_1040627Not Available637Open in IMG/M
3300015286|Ga0182176_1040627Not Available637Open in IMG/M
3300015286|Ga0182176_1052709Not Available587Open in IMG/M
3300015286|Ga0182176_1081806Not Available510Open in IMG/M
3300015287|Ga0182171_1029135Not Available692Open in IMG/M
3300015287|Ga0182171_1040755Not Available631Open in IMG/M
3300015287|Ga0182171_1050029Not Available596Open in IMG/M
3300015287|Ga0182171_1060812Not Available563Open in IMG/M
3300015288|Ga0182173_1049483Not Available593Open in IMG/M
3300015288|Ga0182173_1084699Not Available505Open in IMG/M
3300015289|Ga0182138_1014987Not Available830Open in IMG/M
3300015289|Ga0182138_1049482Not Available599Open in IMG/M
3300015291|Ga0182125_1037974Not Available658Open in IMG/M
3300015292|Ga0182141_1029642Not Available705Open in IMG/M
3300015292|Ga0182141_1034517Not Available675Open in IMG/M
3300015295|Ga0182175_1060762Not Available583Open in IMG/M
3300015296|Ga0182157_1020646Not Available804Open in IMG/M
3300015296|Ga0182157_1046877Not Available638Open in IMG/M
3300015300|Ga0182108_1106074Not Available503Open in IMG/M
3300015302|Ga0182143_1035845Not Available692Open in IMG/M
3300015302|Ga0182143_1073599Not Available561Open in IMG/M
3300015303|Ga0182123_1050602Not Available611Open in IMG/M
3300015304|Ga0182112_1021709Not Available799Open in IMG/M
3300015304|Ga0182112_1050770Not Available628Open in IMG/M
3300015305|Ga0182158_1054223Not Available613Open in IMG/M
3300015308|Ga0182142_1033430Not Available729Open in IMG/M
3300015308|Ga0182142_1052512Not Available640Open in IMG/M
3300015308|Ga0182142_1055480Not Available630Open in IMG/M
3300015308|Ga0182142_1081908Not Available560Open in IMG/M
3300015314|Ga0182140_1019536Not Available850Open in IMG/M
3300015314|Ga0182140_1077079Not Available572Open in IMG/M
3300015314|Ga0182140_1097505Not Available531Open in IMG/M
3300015314|Ga0182140_1107494Not Available515Open in IMG/M
3300015321|Ga0182127_1025050Not Available819Open in IMG/M
3300015321|Ga0182127_1108951Not Available525Open in IMG/M
3300015322|Ga0182110_1113455Not Available518Open in IMG/M
3300015323|Ga0182129_1040288Not Available690Open in IMG/M
3300015341|Ga0182187_1069105Not Available733Open in IMG/M
3300015341|Ga0182187_1104730Not Available635Open in IMG/M
3300015341|Ga0182187_1145403Not Available566Open in IMG/M
3300015342|Ga0182109_1117367Not Available641Open in IMG/M
3300015343|Ga0182155_1194428Not Available531Open in IMG/M
3300015344|Ga0182189_1065316Not Available797Open in IMG/M
3300015344|Ga0182189_1102490Not Available679Open in IMG/M
3300015345|Ga0182111_1224320Not Available520Open in IMG/M
3300015346|Ga0182139_1058937Not Available859Open in IMG/M
3300015346|Ga0182139_1065146Not Available829Open in IMG/M
3300015346|Ga0182139_1139962Not Available625Open in IMG/M
3300015346|Ga0182139_1192645Not Available553Open in IMG/M
3300015347|Ga0182177_1123519Not Available658Open in IMG/M
3300015347|Ga0182177_1240314Not Available509Open in IMG/M
3300015351|Ga0182161_1053851Not Available934Open in IMG/M
3300015351|Ga0182161_1153503Not Available628Open in IMG/M
3300015351|Ga0182161_1243390Not Available522Open in IMG/M
3300015355|Ga0182159_1343616Not Available507Open in IMG/M
3300015361|Ga0182145_1106908Not Available615Open in IMG/M
3300015361|Ga0182145_1121055Not Available590Open in IMG/M
3300017407|Ga0182220_1070637Not Available569Open in IMG/M
3300017407|Ga0182220_1084682Not Available540Open in IMG/M
3300017407|Ga0182220_1098191Not Available517Open in IMG/M
3300017410|Ga0182207_1050484Not Available760Open in IMG/M
3300017410|Ga0182207_1154372Not Available526Open in IMG/M
3300017411|Ga0182208_1057438Not Available647Open in IMG/M
3300017411|Ga0182208_1085896Not Available573Open in IMG/M
3300017413|Ga0182222_1050481Not Available614Open in IMG/M
3300017415|Ga0182202_1048427Not Available703Open in IMG/M
3300017417|Ga0182230_1090569Not Available559Open in IMG/M
3300017420|Ga0182228_1043278Not Available756Open in IMG/M
3300017420|Ga0182228_1057820Not Available675Open in IMG/M
3300017420|Ga0182228_1086825Not Available581Open in IMG/M
3300017424|Ga0182219_1076411Not Available608Open in IMG/M
3300017424|Ga0182219_1081108Not Available597Open in IMG/M
3300017424|Ga0182219_1087907Not Available582Open in IMG/M
3300017424|Ga0182219_1097825Not Available564Open in IMG/M
3300017424|Ga0182219_1133643Not Available510Open in IMG/M
3300017425|Ga0182224_1059895Not Available695Open in IMG/M
3300017425|Ga0182224_1111127Not Available573Open in IMG/M
3300017425|Ga0182224_1163464Not Available504Open in IMG/M
3300017425|Ga0182224_1167420Not Available500Open in IMG/M
3300017427|Ga0182190_1037184Not Available831Open in IMG/M
3300017430|Ga0182192_1036099Not Available858Open in IMG/M
3300017430|Ga0182192_1074072Not Available675Open in IMG/M
3300017430|Ga0182192_1082807Not Available650Open in IMG/M
3300017433|Ga0182206_1032651Not Available826Open in IMG/M
3300017433|Ga0182206_1090675Not Available603Open in IMG/M
3300017436|Ga0182209_1037618Not Available815Open in IMG/M
3300017436|Ga0182209_1046496Not Available764Open in IMG/M
3300017436|Ga0182209_1083268Not Available638Open in IMG/M
3300017436|Ga0182209_1083268Not Available638Open in IMG/M
3300017436|Ga0182209_1139454Not Available541Open in IMG/M
3300017436|Ga0182209_1173099Not Available502Open in IMG/M
3300017438|Ga0182191_1126647Not Available570Open in IMG/M
3300017442|Ga0182221_1054226Not Available716Open in IMG/M
3300017442|Ga0182221_1088878Not Available616Open in IMG/M
3300017442|Ga0182221_1119523Not Available562Open in IMG/M
3300017443|Ga0182193_1023138Not Available1010Open in IMG/M
3300017443|Ga0182193_1133651Not Available576Open in IMG/M
3300017680|Ga0182233_1031768Not Available931Open in IMG/M
3300017682|Ga0182229_1088763Not Available542Open in IMG/M
3300017682|Ga0182229_1101514Not Available512Open in IMG/M
3300017684|Ga0182225_1115196Not Available540Open in IMG/M
3300017685|Ga0182227_1060000Not Available688Open in IMG/M
3300017685|Ga0182227_1072007Not Available640Open in IMG/M
3300017685|Ga0182227_1107706Not Available549Open in IMG/M
3300017685|Ga0182227_1122558Not Available523Open in IMG/M
3300017690|Ga0182223_1021287Not Available811Open in IMG/M
3300017690|Ga0182223_1051460Not Available642Open in IMG/M
3300017690|Ga0182223_1051460Not Available642Open in IMG/M
3300021060|Ga0182232_1036426Not Available833Open in IMG/M
3300021060|Ga0182232_1041652Not Available772Open in IMG/M
3300021060|Ga0182232_1043569Not Available751Open in IMG/M
3300021060|Ga0182232_1085566Not Available511Open in IMG/M
3300021060|Ga0182232_1086858Not Available507Open in IMG/M
3300026089|Ga0207648_11853659Not Available565Open in IMG/M
3300026861|Ga0207503_1011945Not Available548Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere88.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.40%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere3.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.68%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015267Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015268Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015269Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015275Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015277Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015279Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015281Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015282Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015283Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015286Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015287Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015288Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015289Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015291Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015292Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015295Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015296Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015300Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015302Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015303Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015305Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015308Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015314Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015321Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015322Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015342Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015344Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017407Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017417Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017420Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017424Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017427Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017430Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017433Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017436Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017443Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017680Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017682Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017684Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017685Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017690Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300021060Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MGHost-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026861Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-12 (SPAdes)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068866_1132678423300005718Miscanthus RhizosphereVVYRHSGVVLVLNFFLGLHVPRVKKTPSLGFSGEGLLLSE
Ga0068870_1059167713300005840Miscanthus RhizosphereVVLVSKLFSGLHVPRVKETPSLGFSEDGLLLSEV*
Ga0068870_1088230213300005840Miscanthus RhizosphereMVYRHSDIVLVLNVFLGLHVPRVKETPSLGFFGEGLLLSEV*
Ga0097621_10235430213300006237Miscanthus RhizosphereINVSVVHWHFGVVLVSNFFLDLHVPHVNETPSLGFSEEGLLLSEV*
Ga0105246_1096417513300011119Miscanthus RhizosphereSGNVLVSKLFSGLHVPRVKETPSLGFSGEGWLLSEV*
Ga0157374_1232282813300013296Miscanthus RhizosphereLYTYVIKVSVVHRHSGVVLVSKLFSGLHVPHVKETPSLGFFGDGLLLSEV*
Ga0157378_1142917313300013297Miscanthus RhizosphereKVSVVHRHFGVVLVSNFFLGLHVPRVKETPSLGFSEEGLLLSEV*
Ga0157378_1243626313300013297Miscanthus RhizosphereHSGAILVSNFFLGLHMPWVKETPSLGFSGDGLLLSEV*
Ga0157378_1244285313300013297Miscanthus RhizosphereVIKVSVVYRHSGVVLVLNFFLGLHMPRVKKTPSLGFSGEGLLLSED*
Ga0157378_1318767023300013297Miscanthus RhizosphereHSGVVLVLNIFLGLHVPLVTETLSLGFFGEGLLLSKV*
Ga0182122_104600313300015267Miscanthus PhyllosphereKVSMVRTHSDVVLVSNFFLGLHVLCVKETPSLGFSKDGLLLSEV*
Ga0182122_106204013300015267Miscanthus PhyllosphereHSGIVLVSNFFSGLHVPRAKETPSLGFFGYGLLLSEV*
Ga0182154_102358813300015268Miscanthus PhyllosphereSVVHRHSDVVFISNFFLRLHGPRVKETPSLGFSGDGLLLYEV*
Ga0182154_102567413300015268Miscanthus PhyllosphereVIKVSVVHTHSGIVLVSNFFLGLHVSRVKETPNLEFFRDDLLPSEV*
Ga0182154_104729213300015268Miscanthus PhyllosphereVVHRHSGVVLVSKLFLSLHMPLVMEAPSLGFSGDGMLLSE
Ga0182113_102070313300015269Miscanthus PhyllosphereVVHTHSGVVLVSNFFLGLHVPRAKETPSLGFFGDSLLLSEV*
Ga0182113_103803513300015269Miscanthus PhyllosphereIKVYVVRTYSGVVFVPNLFFGLHVLRVKETLSLGFFGDGLLLSEV*
Ga0182113_106786413300015269Miscanthus PhyllosphereSHSGIVLVSNFFLGLHVPRVKETPSLGFSRDGLLLSDV*
Ga0182113_107083513300015269Miscanthus PhyllosphereVPRYSGVVFVSIFFYGLHVPRVKETPSLGFPGDGLLLSKV*
Ga0182113_107693013300015269Miscanthus PhyllosphereTKNIHSGVILLSKLFSGLHVPRVKETPSLGFFGDGLLLSEV*
Ga0182113_108089413300015269Miscanthus PhyllosphereVSVVHTLSGVVLVSNFFLGLHVPCVKETSSLGFSGDSFLLSEV*
Ga0182188_101778813300015274Miscanthus PhyllosphereVASVTNLFLGLHVPWVKETPSLRFSEDGLLLSEV*
Ga0182172_106181813300015275Miscanthus PhyllosphereMVHIHSGVILVSNFFLGLHVPHVKETPSLRFFGDGLLLS
Ga0182128_107721713300015277Miscanthus PhyllosphereMIHTHSDVVLVSNFFLGLHMPRVNETPSFGFFGDGLL
Ga0182174_102740413300015279Miscanthus PhyllosphereKVSVVDRHPDVVFVSNFFSSLHVPHVKETPSLGFFGDGLLFSEV*
Ga0182160_101897513300015281Miscanthus PhyllosphereVVYRHSGVVLVLNFFLGLHVPRVKKTPSLGFSGEGLLLS
Ga0182160_102131813300015281Miscanthus PhyllosphereFGVVLVSNVFLGLHVSRVMATPGFEFSVDGLLLSKV*
Ga0182124_101367813300015282Miscanthus PhyllosphereVSVVHWHSGVVLVSNFFLGLHIPRVKETTSLGFFEEGLLLSEV*
Ga0182156_104325113300015283Miscanthus PhyllosphereKVSIVHMHFDVASVTNLFLGLHVPWVKETPSLRFSEDGLLLSEV*
Ga0182176_101549613300015286Miscanthus PhyllosphereFGVVLVLNFFFGLHVSCVKETQSFGFSGYGLLLSEV*
Ga0182176_104062713300015286Miscanthus PhyllosphereVVHRHSGVILVSNFFLGLHVPRVKEALSLGFSEEDLLLSE
Ga0182176_104062723300015286Miscanthus PhyllosphereKVSVVHMHFDVALVSNFFSGLHVPWVKETPSLRFFEDGLLLSEV*
Ga0182176_105270913300015286Miscanthus PhyllosphereHRTMTIHIKVSLVRRNSGVVFVSYFFLDLHVSRVKETPSLGFFGDGLLLSEV*
Ga0182176_108180613300015286Miscanthus PhyllosphereHIGIKVSVVHMHFGIVLVSNFFLGLHVSRVKETSSLRFFGDGLLLSEV*
Ga0182171_102913513300015287Miscanthus PhyllosphereVHRHSSVVLVSNFFLDLHVPHVNETPSLGFFEEGLLLSEV*
Ga0182171_104075523300015287Miscanthus PhyllosphereVHMHSGVVLVSKFFSGLHMPRVKEPPSLGLFQDGLVLSAA*
Ga0182171_105002913300015287Miscanthus PhyllosphereVIKVFVVHRHSGVLLVSNFFLGLHMPRVKETPSLGFSGDGLLLYEV*
Ga0182171_106081213300015287Miscanthus PhyllosphereHRHSGVVLVSNFFLGLHVPRVKETPSLGFSGEGLLLSEV*
Ga0182173_104948313300015288Miscanthus PhyllosphereIMVSMVHMHSGVVLISNFFLGLHMPRVKETPSFRFLEDGLLLSEV*
Ga0182173_108469913300015288Miscanthus PhyllosphereVHRHSSVVLVSNFFLDLHVPHVNETPSLGFSEEGLLLSEV*
Ga0182138_101498713300015289Miscanthus PhyllospherePVVHRHLYVIFFSNFFSSLHVPRVKETPSLGFSGDGLLLSEV*
Ga0182138_104948213300015289Miscanthus PhyllosphereVIKVSVVYRHSGVVLVLNIFLGLHVPLVTETLSLGFFGEGLLLSKV*
Ga0182125_103797413300015291Miscanthus PhyllosphereRYFGVVFILKILFALHVPRVKETTSLVFSRDGLLLSEV*
Ga0182141_102964213300015292Miscanthus PhyllosphereHSGVVLVSNFFLSLDVPRVKETPSLGFFGEGLLLSEV*
Ga0182141_103451713300015292Miscanthus PhyllosphereVLHRHSDIVFVSNFFLDLHMPRVKKTPSLGFSGDGLLLSE
Ga0182175_106076223300015295Miscanthus PhyllosphereMVHMHSGVVFVPNFFLGLHVPRVKETPSFGFSGDGLLLS
Ga0182157_102064613300015296Miscanthus PhyllosphereGVVLVSNFFLGLHVPRVKETPSLGFSGEGLLLSEV*
Ga0182157_104687713300015296Miscanthus PhyllosphereVHMHSGVVLVSNFFSGLHVPRVKETPSFGFFGDGLLLSEV*
Ga0182108_110607413300015300Miscanthus PhyllosphereVIKVSVVHMHSVVVLVSTFFLGLHMAREKETPSLGFSGDGLLLFEV*
Ga0182143_103584513300015302Miscanthus PhyllosphereMHSGVVLVSNFFSGLHMPRVKETPSFGFSGDGLLL
Ga0182143_107359913300015302Miscanthus PhyllosphereFSVVFISNFFLGLHVSRVKKTSSLGFFEDGLLLSEV*
Ga0182123_105060213300015303Miscanthus PhyllosphereHSGVVLVSNFFLGLHVPRVKETPSFGFFGDGLLLSEV*
Ga0182112_102170913300015304Miscanthus PhyllosphereMHSGVVLISNFFLGLHVSRVKETPSFGFSGDGLLLCEV*
Ga0182112_105077013300015304Miscanthus PhyllosphereIVLVSNFFLGLHVPCVKETPSLGFFGDDLLLCEV*
Ga0182158_105422313300015305Miscanthus PhyllosphereVVLVSNFFLGLHMPCVKETPSFGFSEDGLLLSEV*
Ga0182142_103343013300015308Miscanthus PhyllosphereVVFVSNFFLGLHVPHVKETPSLGFSRDGLLLSEV*
Ga0182142_105251213300015308Miscanthus PhyllosphereSMVHTHSGVILVSNFFLGLHVPRVNETPSLGFFGDGLLLSDV*
Ga0182142_105548013300015308Miscanthus PhyllosphereVHRHSDVVFISNFFLGLHVPHVKETPSLGFSGDGLLLSEV*
Ga0182142_108190813300015308Miscanthus PhyllosphereKVYVVHMHSGVVLVSNFFLGLHMPWVKETLSLGIFGVGLLLSEV*
Ga0182140_101953613300015314Miscanthus PhyllosphereMVYRHSSVVLVSNFFLGLHVPRVKKTPSLVFSGEGLLLSED*
Ga0182140_107707913300015314Miscanthus PhyllosphereSVVDMHSGLALVSNFFLALHVPWVKETPSLRFSKDGLLLSEV*
Ga0182140_109750513300015314Miscanthus PhyllosphereGVVFISNFFLGLHVTRVKKTSSLGFFGDGLLLSEV*
Ga0182140_110749413300015314Miscanthus PhyllosphereHSGVVFVSKLFSGLHVLRVKETPSLGFSRDGFLLSEV*
Ga0182127_102505013300015321Miscanthus PhyllosphereVHRHSGVVFISNFFLGLHVLCVKETSSLGFFRDGLLLSEV*
Ga0182127_110895113300015321Miscanthus PhyllosphereVIKVSVVHRHSSVVLVSKLFSGLHVPRVKETPSLVFFGDGLLLSEV*
Ga0182110_111345513300015322Miscanthus PhyllosphereMHFDVASVTNLFLGLHVPWVKETPSLRFSEDGLLL
Ga0182129_104028813300015323Miscanthus PhyllosphereTYVIKVSMVHTHSGVVVVSNFFLRLHVPCVKETPSSGFSRDGLQLYEL*
Ga0182187_106910513300015341Miscanthus PhyllosphereSMVYRHSSVVLVSNFFLGLHVPRVKKTPSLGFSGEGLLLSED*
Ga0182187_110473013300015341Miscanthus PhyllosphereVSVVHRHSGVVLVSKLFSGLHVPRVKETPSLGFFGDGLLLSEV*
Ga0182187_114540313300015341Miscanthus PhyllosphereVSVVLTHSGVVLVSNFFLGLHVPYVKETPSLGFFRDGLLLSEV*
Ga0182109_111736713300015342Miscanthus PhyllosphereCVVYRHSGVVLVLNFFLGLHVPRVKKTPSLGFSGEGLLLSED*
Ga0182155_119442813300015343Miscanthus PhyllosphereIMVSVVHRHSGVIFISNFFLGLHVPCVKETPSLGFSGDGLLLSEV*
Ga0182189_106531613300015344Miscanthus PhyllosphereSSVILVSNFFLDLHMTRVKEIPSLGFSRDGLLLSEV*
Ga0182189_110249013300015344Miscanthus PhyllosphereVIKVSVVHRHFGVVLISKLFLGLHVPRAKETPSLGFFGDGLLLF*
Ga0182111_122432013300015345Miscanthus PhyllosphereMHSGVVLGLNFFLGLHVPNVKETPSFGFFGDGLLLSEV*
Ga0182139_105893713300015346Miscanthus PhyllosphereVIKVSVVHMHSGVVLVSNFFLGLHMPRVKETPNLGFSGDGCYFLRFN*
Ga0182139_106514613300015346Miscanthus PhyllosphereKDYVVHRHSSVVLVSNFFLDLHVPHVNETPSLGFFEEGLLLSEV*
Ga0182139_113996213300015346Miscanthus PhyllosphereHFGVVLVSNFFLGLHVPRVNETLSLGFFGDGLLLSEV*
Ga0182139_119264513300015346Miscanthus PhyllosphereVSVVHRHSGVVLVLKLFSGLHVPRVKETPSLGFFRDGLVLSEV*
Ga0182177_112351913300015347Miscanthus PhyllosphereMVHTYSGVVLVSNFFLGFHVPWVKETPSLGFSENGLLLS
Ga0182177_124031413300015347Miscanthus PhyllosphereIHSGVALVSKLFSGLHVRQVKETPSLGFFGEGLPLSEV*
Ga0182161_105385113300015351Miscanthus PhyllosphereIKVSMVYRHSSVVLVSNFFLGLHVPRVKKTPSLVFSGEGLLLSED*
Ga0182161_115350313300015351Miscanthus PhyllosphereSGVVLISNFFLGLHVPRVKETRSSGFFGDGLLLSEV*
Ga0182161_124339013300015351Miscanthus PhyllosphereTYVIKVSVVHTHSSEILVSNFFLGLRVPRVKETPSLGFFGDGLLLSEV*
Ga0182159_134361613300015355Miscanthus PhyllosphereGVVLVSNFFLALHVPRVKETPSFGFFRDSLLLSEV*
Ga0182145_110690813300015361Miscanthus PhyllosphereSGLALVSNFFLALHVPWVKETPSLRFSKDGLLLSEV*
Ga0182145_112105513300015361Miscanthus PhyllosphereHSGVILVSNFFLGLHVPHVKETLSLGFFGEGLLLSEV*
Ga0182220_107063713300017407Miscanthus PhyllosphereVVHRHSGVVLVSNFFLGLHVPCVKETPSLGFSGEGLL
Ga0182220_108468223300017407Miscanthus PhyllosphereVVHMYSGVVLVSNFFLGLHMPRVKETPSLGFSGDGLLLSEVIKFLCDVTD
Ga0182220_109819113300017407Miscanthus PhyllosphereVIKVSMVHRHFGVVFILNFFSGLHMPRVKETPSLGFSGDGLLLLRFN
Ga0182207_105048413300017410Miscanthus PhyllosphereIKVSVVHTYSGVVLVSNFFLGLHVPRMKETPSLGFSEDDLLLSKV
Ga0182207_115437213300017410Miscanthus PhyllosphereYSGVIFVSIIFYGLHVPRVKETPSLGFPGDGLLLSEV
Ga0182208_105743813300017411Miscanthus PhyllosphereGVVLVSKLFSGLHVPCVKETPSLGFSRDGLLLSDV
Ga0182208_108589613300017411Miscanthus PhyllosphereVIKVSVIHRHFRVVFISNFFLGLHVLRVMGTQSLGFFGDGLLLSEV
Ga0182222_105048113300017413Miscanthus PhyllosphereSGVVLISNFFLGLHVPRVKETPSFGFFGDDLLLSEV
Ga0182202_104842713300017415Miscanthus PhyllosphereFLWFIRNSGVVLVSKFFLGLHVACVKESPSLGFFEDDLLLSKV
Ga0182230_109056913300017417Miscanthus PhyllosphereMVHTHSGVVVVSNFFLRLHVPCVKETPSSGFSRDGL
Ga0182230_111006613300017417Miscanthus PhyllosphereICWTTTNIHSGVVLVLKLFSGLHVPRVKETPSLGFFGDGLLLSGV
Ga0182228_104327813300017420Miscanthus PhyllosphereSSVVLVSNFFLDLHVPHVNETPSLGFSEEGLLLSEV
Ga0182228_105782013300017420Miscanthus PhyllosphereVIKDSMVHIHSGVILVSKLFLGLHVPRVKETPSLGFSRDATF
Ga0182228_108682513300017420Miscanthus PhyllosphereVVHRHSGVVFVSNFFLGLHVPRVKETPSLGFFGDGL
Ga0182219_107641113300017424Miscanthus PhyllosphereVSVVHTHSGVVLVSNFLLDLHVPRVKETPSLDFFGDGLLLSEV
Ga0182219_108110813300017424Miscanthus PhyllosphereRHSGVVLVLNFFLGLHVPRVKKTPSLGFFGEGLLLSED
Ga0182219_108790713300017424Miscanthus PhyllosphereMVHMHSGAVLVLNFFLGFHMSRVKETPSLRFFGDGLLLSKV
Ga0182219_109782513300017424Miscanthus PhyllosphereHTYSGVILVLNFFLDLHVPRVKETPSLGFSGDGLLLYEL
Ga0182219_113364313300017424Miscanthus PhyllosphereIKVSVVHRHSGVVLVSNFFLGLCMPRVKETSSLGFFGDGLLLSEV
Ga0182224_105989513300017425Miscanthus PhyllosphereVVHRHSSVVLVSNFFLDLHVPHVNETPSLGFFEEGLLLSEV
Ga0182224_111112713300017425Miscanthus PhyllosphereVIKVSLVQRNSGVVFVSYFFLDLHVPRMKETPSSGFSRDGLLLSKV
Ga0182224_116346413300017425Miscanthus PhyllosphereQGFCGYRHSGVVFVSNFFLGLHGPRVKETPSLGFSGDGLLVYEV
Ga0182224_116742013300017425Miscanthus PhyllosphereKVSVVHRHSSVILVSNFFLDLHLPRVKETPSLGFSGDGLLLSKV
Ga0182190_103718413300017427Miscanthus PhyllosphereMVYRHSSVVLVSNFFLGLHVPCVKKTPSLGFSGEGLLLSED
Ga0182192_103609913300017430Miscanthus PhyllosphereVVYMHSGVVLVSNFFLGLHVPRVKETPSFGFSGDG
Ga0182192_107407213300017430Miscanthus PhyllosphereHSDVVLVSKFFLVLHVPRVKETPSLGFSGDSLLFSEV
Ga0182192_108280713300017430Miscanthus PhyllosphereVSVVHVHSDVVLVSNFFLGMHVPWVKETPMLRFSEDGLLLSEV
Ga0182206_103265113300017433Miscanthus PhyllosphereHFGVVLVSNFFLGLHVPRLKETPCLGFSEEGLLLSEV
Ga0182206_109067513300017433Miscanthus PhyllosphereVIKVSMVHMHSGVVLVSNFFLDLHVPRVKETPSFGFSRDGLLLSEV
Ga0182209_103761823300017436Miscanthus PhyllosphereVSVVHRHSGVVLVSNFFLGLHVPRVKEALSLGFSKEDLLLSEV
Ga0182209_104649613300017436Miscanthus PhyllosphereHRHFGVVLVSNFFLGLHVPRVKKTPSLGFSGDGLLLSEV
Ga0182209_108326813300017436Miscanthus PhyllosphereMHSGVVLVSNFFLSLHVPRVKKTPSFGFSEDGLLLFE
Ga0182209_108326823300017436Miscanthus PhyllosphereIKFYVVHMYFGVVLVSNFFLGLHMPQVKETPSLGFSGDGLLLSEV
Ga0182209_113945413300017436Miscanthus PhyllosphereYTQVINVSMVYRHSSVVLVSNFFLGLHIPRVKETPSLGFSRDGLPLSEV
Ga0182209_117309913300017436Miscanthus PhyllosphereSVVLVSNFFLGLHVSRVKETPSLGFFGDGLLLFEV
Ga0182191_112664713300017438Miscanthus PhyllosphereSGVVLVSNFFLGLHIPRVKETTSLGFFEEGLLLSEV
Ga0182221_105422613300017442Miscanthus PhyllosphereVINVSVVHWHSGVVLVSNFFLGLHVPRVKKTPSLGFSVEGLLLSEV
Ga0182221_108887823300017442Miscanthus PhyllosphereLKVSVVHMRSGVALVSNFFLGLHVPRVKETPSLGFSEDGLLLSAV
Ga0182221_111952313300017442Miscanthus PhyllosphereKVSVVYRHSDVVFVLNFFLGLHVTRVKETPSLRFSGDGLLLSKV
Ga0182193_102313813300017443Miscanthus PhyllosphereVHMHSGVVLVSNFFLGLHVPWVKETPSLRFPEDGFLLSEV
Ga0182193_113365113300017443Miscanthus PhyllosphereVVHRHFGVVLVSNFFLGLHVPRVKETPSLGFSEEGLLLSEV
Ga0182233_103176813300017680Miscanthus PhyllosphereVFVVHMHSGVRLVSKYFLGLHMPRVKETPSLGFSGDDLLLSEV
Ga0182233_105679013300017680Miscanthus PhyllosphereIALKIRATRNLHFNIALVSKLFSGLHVPRVKKTPSLGFSGDDLLFSNI
Ga0182229_108876313300017682Miscanthus PhyllosphereVSVVHMYSGVVLVSNFFLGLHVPYVKETLSLRFFGDGLLLSDV
Ga0182229_110151413300017682Miscanthus PhyllosphereGVVLVSNFFLGLHVPRVKETPSFGFSGDGLLLSKV
Ga0182225_111519613300017684Miscanthus PhyllosphereVHTHSGVVLVSHFFLGLHVPRVKETPSLGFSTDGLLLSKV
Ga0182227_106000013300017685Miscanthus PhyllosphereVHRYFDVVFVSNFLFGLHVPRVKETPSLGLSEDGLLLSKV
Ga0182227_107200713300017685Miscanthus PhyllosphereHSGVVFISNFFLGLHVPHVKETPSFGFFEDGLLLSEV
Ga0182227_110770613300017685Miscanthus PhyllosphereHSGVVLVSNFFLGLHVPRVNETPSLGFSEDGLLLSEV
Ga0182227_112255813300017685Miscanthus PhyllosphereIKVSVVHRHSGVVLVSNFFLGLHVPRVKEALSLGFSKEDLLLSEV
Ga0182223_102128713300017690Miscanthus PhyllosphereYFGVVFISNFLFGLHVPRVKETPSLVFFGDGLLLSKV
Ga0182223_105146013300017690Miscanthus PhyllosphereMHSGVVLVSNFFLGLHMPWEKETPSLGFSGDGLLLSEV
Ga0182223_105146023300017690Miscanthus PhyllosphereVVDRYSGVVLVLNFFLGLHVPHVKETPSLGFFRDGLLLSKKSQTWCFLH
Ga0182232_103642623300021060PhyllosphereVIKVSVVHRHSSVVLVSNFFLDLHVPHVNETPSLGFSEEGMLLSEV
Ga0182232_104165213300021060PhyllosphereMVYRHSSVVLVSNFFLGLHVPRVKKTPSLVFSGEGLLL
Ga0182232_104356913300021060PhyllosphereVIKVCVVYRHSGVVLVLNFFLGLHVPRVKKTPSLGFSGEGLLLSED
Ga0182232_108556613300021060PhyllosphereINVSVVHWHSGVVLVSNFFLGLHVPRVKEALSLGFSKEDLLLSEV
Ga0182232_108685813300021060PhyllosphereVIKVYSVYTHSGAILVSNFFLGLHVPRVKETSSLRFFGDGLLLSEV
Ga0207648_1185365913300026089Miscanthus RhizosphereVIKVSVVHRRSGVVLVSNFFLGLHVPRVKEALSLGFSKEDLLLSEV
Ga0207503_101194513300026861SoilMYSGVVLVSNFFLGLHMPRVKETPSLGFSEDGLLLSHI


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