Metagenome / Metatranscriptome Family F048955

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F048955
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	77 residues
Representative Sequence	MSKKEQFLAFVLVGAMAQDVSTKSNDCPLIMHMAGQIPEERIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHN
Number of Associated Samples	87
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.39 %
% of genes near scaffold ends (potentially truncated)	22.45 %
% of genes from short scaffolds (< 2000 bps)	65.99 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (57.823 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (20.408 % of family members)
Environment Ontology (ENVO)	Unclassified (67.347 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (42.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.00% β-sheet: 0.00% Coil/Unstructured: 53.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.74.1.0: automated matches	d3mi9b1	3mi9	0.67279
a.74.1.1: Cyclin	d1w98b2	1w98	0.64614
a.74.1.1: Cyclin	d2i53a1	2i53	0.64586
a.74.1.1: Cyclin	d4eojb1	4eoj	0.63297
a.74.1.1: Cyclin	d1f5qb1	1f5q	0.63188

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF00005	ABC_tran	7.48
PF02597	ThiS	6.80
PF02391	MoaE	3.40
PF13584	BatD	2.04
PF00155	Aminotran_1_2	2.04
PF00903	Glyoxalase	2.04
PF01977	UbiD	2.04
PF01081	Aldolase	1.36
PF05222	AlaDh_PNT_N	1.36
PF01381	HTH_3	1.36
PF07719	TPR_2	0.68
PF12762	DDE_Tnp_IS1595	0.68
PF12681	Glyoxalase_2	0.68
PF02113	Peptidase_S13	0.68
PF07589	PEP-CTERM	0.68
PF13560	HTH_31	0.68
PF13884	Peptidase_S74	0.68
PF13304	AAA_21	0.68
PF07043	DUF1328	0.68
PF07679	I-set	0.68
PF00215	OMPdecase	0.68
PF11004	Kdo_hydroxy	0.68
PF01344	Kelch_1	0.68
PF00465	Fe-ADH	0.68
PF02781	G6PD_C	0.68
PF02834	LigT_PEase	0.68
PF13557	Phenol_MetA_deg	0.68
PF04545	Sigma70_r4	0.68
PF13184	KH_5	0.68
PF01513	NAD_kinase	0.68
PF08334	T2SSG	0.68
PF02621	VitK2_biosynth	0.68
PF14815	NUDIX_4	0.68
PF00072	Response_reg	0.68
PF13306	LRR_5	0.68
PF00196	GerE	0.68
PF13376	OmdA	0.68
PF16355	DUF4982	0.68
PF14842	FliG_N	0.68
PF14509	GH97_C	0.68
PF03129	HGTP_anticodon	0.68
PF07859	Abhydrolase_3	0.68
PF04616	Glyco_hydro_43	0.68
PF00578	AhpC-TSA	0.68
PF00535	Glycos_transf_2	0.68
PF06733	DEAD_2	0.68
PF13701	DDE_Tnp_1_4	0.68
PF13360	PQQ_2	0.68
PF02954	HTH_8	0.68
PF03739	LptF_LptG	0.68
PF08668	HDOD	0.68
PF12728	HTH_17	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	6.80
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	6.80
COG0314	Molybdopterin synthase catalytic subunit MoaE	Coenzyme transport and metabolism [H]	3.40
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	2.04
COG0800	2-keto-3-deoxy-6-phosphogluconate aldolase	Carbohydrate transport and metabolism [G]	1.36
COG1199	Rad3-related DNA helicase DinG	Replication, recombination and repair [L]	1.36
COG0795	Lipopolysaccharide export LptBFGC system, permease protein LptF	Cell wall/membrane/envelope biogenesis [M]	0.68
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	0.68
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.68
COG1514	RNA 2',3'-cyclic phosphodiesterase (2'-5' RNA ligase)	Translation, ribosomal structure and biogenesis [J]	0.68
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.68
COG1427	Chorismate dehydratase (menaquinone biosynthesis, futalosine pathway)	Coenzyme transport and metabolism [H]	0.68
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.68
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.68
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.68
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.68
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.68
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.68
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.68
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.82 %
Unclassified	root	N/A	42.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.82 %
Unclassified	root	N/A	42.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.82 %
Unclassified	root	N/A	42.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.18 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	30.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.36 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.18 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	29.25 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.18 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	17.69 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.44 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.18 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	17.69 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.44 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.68 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.68 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.18 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	8.84 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.44 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.68 %
unclassified Sinobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae	0.68 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.18 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	7.48 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.44 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	1.36 %
Sinobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	0.68 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.68 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.18 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7.48 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.44 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.36 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	0.68 %
Sinobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	0.68 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.18 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7.48 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.44 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.36 %
Chitinophaga skermanii	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga skermanii	0.68 %
Sinobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	0.68 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_100997952	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300004092\|Ga0062389_104529675	Not Available	523	Open in IMG/M
3300004152\|Ga0062386_100151950	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300005435\|Ga0070714_101892683	Not Available	582	Open in IMG/M
3300005530\|Ga0070679_101266427	Not Available	683	Open in IMG/M
3300006638\|Ga0075522_10004704	All Organisms → cellular organisms → Bacteria	9702	Open in IMG/M
3300009524\|Ga0116225_1209002	Not Available	881	Open in IMG/M
3300009547\|Ga0116136_1155627	Not Available	578	Open in IMG/M
3300009548\|Ga0116107_1008043	All Organisms → cellular organisms → Bacteria → Acidobacteria	4663	Open in IMG/M
3300009618\|Ga0116127_1019905	Not Available	2177	Open in IMG/M
3300009630\|Ga0116114_1046922	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300009646\|Ga0116132_1132854	Not Available	760	Open in IMG/M
3300009672\|Ga0116215_1514739	Not Available	517	Open in IMG/M
3300009700\|Ga0116217_10042148	All Organisms → cellular organisms → Bacteria	3379	Open in IMG/M
3300010341\|Ga0074045_10099409	Not Available	2015	Open in IMG/M
3300010341\|Ga0074045_10366936	Not Available	937	Open in IMG/M
3300010341\|Ga0074045_10405624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	883	Open in IMG/M
3300010341\|Ga0074045_10426189	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300010379\|Ga0136449_100481023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2165	Open in IMG/M
3300014151\|Ga0181539_1000744	All Organisms → cellular organisms → Bacteria	38663	Open in IMG/M
3300014151\|Ga0181539_1035688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2495	Open in IMG/M
3300014153\|Ga0181527_1004401	All Organisms → cellular organisms → Bacteria	12106	Open in IMG/M
3300014156\|Ga0181518_10000618	All Organisms → cellular organisms → Bacteria	38487	Open in IMG/M
3300014156\|Ga0181518_10212132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1001	Open in IMG/M
3300014156\|Ga0181518_10238575	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300014158\|Ga0181521_10420797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300014159\|Ga0181530_10075740	Not Available	2082	Open in IMG/M
3300014159\|Ga0181530_10202240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1092	Open in IMG/M
3300014159\|Ga0181530_10595606	Not Available	541	Open in IMG/M
3300014160\|Ga0181517_10102638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1661	Open in IMG/M
3300014161\|Ga0181529_10067913	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300014162\|Ga0181538_10028314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3758	Open in IMG/M
3300014164\|Ga0181532_10002930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	15651	Open in IMG/M
3300014164\|Ga0181532_10176235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1268	Open in IMG/M
3300014167\|Ga0181528_10094965	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300014199\|Ga0181535_10068486	All Organisms → cellular organisms → Bacteria	2367	Open in IMG/M
3300014199\|Ga0181535_10193409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1253	Open in IMG/M
3300014200\|Ga0181526_10567537	Not Available	717	Open in IMG/M
3300014489\|Ga0182018_10025624	All Organisms → cellular organisms → Bacteria → Proteobacteria	3820	Open in IMG/M
3300014489\|Ga0182018_10280891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	909	Open in IMG/M
3300014491\|Ga0182014_10196445	Not Available	1094	Open in IMG/M
3300014492\|Ga0182013_10051209	All Organisms → cellular organisms → Bacteria	3143	Open in IMG/M
3300014492\|Ga0182013_10078959	Not Available	2316	Open in IMG/M
3300014492\|Ga0182013_10136944	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1570	Open in IMG/M
3300014492\|Ga0182013_10259407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1000	Open in IMG/M
3300014493\|Ga0182016_10017596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	6527	Open in IMG/M
3300014494\|Ga0182017_10549951	Not Available	705	Open in IMG/M
3300014498\|Ga0182019_11062703	Not Available	590	Open in IMG/M
3300014501\|Ga0182024_10001159	All Organisms → cellular organisms → Bacteria	68231	Open in IMG/M
3300014501\|Ga0182024_10051455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6520	Open in IMG/M
3300014501\|Ga0182024_11900847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300014838\|Ga0182030_10066283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	5435	Open in IMG/M
3300014838\|Ga0182030_11353161	Not Available	597	Open in IMG/M
3300014839\|Ga0182027_10002585	All Organisms → cellular organisms → Bacteria	29237	Open in IMG/M
3300014839\|Ga0182027_10070138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4309	Open in IMG/M
3300014839\|Ga0182027_10143130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2824	Open in IMG/M
3300014839\|Ga0182027_10763870	Not Available	1016	Open in IMG/M
3300016750\|Ga0181505_10718369	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300017929\|Ga0187849_1167626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	875	Open in IMG/M
3300017935\|Ga0187848_10004402	All Organisms → cellular organisms → Bacteria	9826	Open in IMG/M
3300017935\|Ga0187848_10139371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1075	Open in IMG/M
3300017935\|Ga0187848_10416369	Not Available	553	Open in IMG/M
3300017940\|Ga0187853_10157547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1083	Open in IMG/M
3300017946\|Ga0187879_10232288	Not Available	1030	Open in IMG/M
3300017948\|Ga0187847_10505993	Not Available	670	Open in IMG/M
3300017988\|Ga0181520_10070503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3152	Open in IMG/M
3300017988\|Ga0181520_10157298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1840	Open in IMG/M
3300017988\|Ga0181520_10250252	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300017988\|Ga0181520_10306233	Not Available	1187	Open in IMG/M
3300017988\|Ga0181520_10313142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1170	Open in IMG/M
3300017988\|Ga0181520_10778192	Not Available	647	Open in IMG/M
3300017988\|Ga0181520_11093163	Not Available	524	Open in IMG/M
3300017996\|Ga0187891_1174777	Not Available	748	Open in IMG/M
3300018003\|Ga0187876_1245465	Not Available	585	Open in IMG/M
3300018013\|Ga0187873_1087221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1255	Open in IMG/M
3300018014\|Ga0187860_1072275	Not Available	1650	Open in IMG/M
3300018019\|Ga0187874_10045196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2072	Open in IMG/M
3300018024\|Ga0187881_10265611	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300018024\|Ga0187881_10405763	Not Available	558	Open in IMG/M
3300018033\|Ga0187867_10333658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	845	Open in IMG/M
3300018033\|Ga0187867_10447141	Not Available	713	Open in IMG/M
3300018033\|Ga0187867_10677412	Not Available	562	Open in IMG/M
3300018034\|Ga0187863_10357030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	813	Open in IMG/M
3300018034\|Ga0187863_10746508	Not Available	554	Open in IMG/M
3300018035\|Ga0187875_10042494	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2677	Open in IMG/M
3300018035\|Ga0187875_10108988	All Organisms → cellular organisms → Bacteria → PVC group	1569	Open in IMG/M
3300018035\|Ga0187875_10119666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1487	Open in IMG/M
3300018035\|Ga0187875_10539287	Not Available	617	Open in IMG/M
3300018038\|Ga0187855_10442725	Not Available	757	Open in IMG/M
3300018042\|Ga0187871_10040985	Not Available	2837	Open in IMG/M
3300018044\|Ga0187890_10228019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1052	Open in IMG/M
3300018044\|Ga0187890_10883592	Not Available	504	Open in IMG/M
3300018046\|Ga0187851_10700939	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300018057\|Ga0187858_10183693	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300018090\|Ga0187770_10475953	Not Available	987	Open in IMG/M
3300022524\|Ga0224534_1058325	Not Available	768	Open in IMG/M
3300022875\|Ga0224553_1018496	Not Available	1806	Open in IMG/M
3300023088\|Ga0224555_1031580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2229	Open in IMG/M
3300023101\|Ga0224557_1057439	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300023101\|Ga0224557_1067248	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300023101\|Ga0224557_1210564	Not Available	669	Open in IMG/M
3300025444\|Ga0208189_1064993	Not Available	672	Open in IMG/M
3300025446\|Ga0208038_1045453	Not Available	867	Open in IMG/M
3300025574\|Ga0208717_1135357	Not Available	534	Open in IMG/M
3300025862\|Ga0209483_1004260	All Organisms → cellular organisms → Bacteria	9132	Open in IMG/M
3300025921\|Ga0207652_11782565	Not Available	520	Open in IMG/M
3300027662\|Ga0208565_1232414	Not Available	517	Open in IMG/M
3300027825\|Ga0209039_10200307	Not Available	812	Open in IMG/M
3300027854\|Ga0209517_10319008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300027854\|Ga0209517_10375957	Not Available	806	Open in IMG/M
3300027854\|Ga0209517_10420769	Not Available	746	Open in IMG/M
3300029817\|Ga0247275_1057103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1092	Open in IMG/M
3300029817\|Ga0247275_1177206	Not Available	525	Open in IMG/M
3300029889\|Ga0246001_1089183	Not Available	552	Open in IMG/M
3300031234\|Ga0302325_10520659	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300031234\|Ga0302325_11371172	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	923	Open in IMG/M
3300031236\|Ga0302324_101410764	Not Available	911	Open in IMG/M
3300031251\|Ga0265327_10002607	All Organisms → cellular organisms → Bacteria	18665	Open in IMG/M
3300031524\|Ga0302320_10042870	All Organisms → cellular organisms → Bacteria	8237	Open in IMG/M
3300031524\|Ga0302320_10098072	Not Available	4734	Open in IMG/M
3300031524\|Ga0302320_10212653	All Organisms → cellular organisms → Bacteria	2741	Open in IMG/M
3300031524\|Ga0302320_12241249	Not Available	503	Open in IMG/M
3300031525\|Ga0302326_11044847	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300031595\|Ga0265313_10134183	Not Available	1070	Open in IMG/M
3300031708\|Ga0310686_108506820	Not Available	523	Open in IMG/M
3300031708\|Ga0310686_112380907	All Organisms → cellular organisms → Bacteria	18657	Open in IMG/M
3300031708\|Ga0310686_115569522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	8416	Open in IMG/M
3300031708\|Ga0310686_115649487	Not Available	549	Open in IMG/M
3300031715\|Ga0307476_10834458	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga skermanii	681	Open in IMG/M
3300032160\|Ga0311301_10012842	All Organisms → cellular organisms → Bacteria	25870	Open in IMG/M
3300032160\|Ga0311301_10226155	Not Available	3141	Open in IMG/M
3300032562\|Ga0316226_1022935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3603	Open in IMG/M
3300032893\|Ga0335069_11327676	Not Available	781	Open in IMG/M
3300033402\|Ga0326728_10000847	All Organisms → cellular organisms → Bacteria	115208	Open in IMG/M
3300033402\|Ga0326728_10001488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	82447	Open in IMG/M
3300033402\|Ga0326728_10004458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	41391	Open in IMG/M
3300033402\|Ga0326728_10004834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	39078	Open in IMG/M
3300033402\|Ga0326728_10007430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	28129	Open in IMG/M
3300033402\|Ga0326728_10020988	All Organisms → cellular organisms → Bacteria	12358	Open in IMG/M
3300033402\|Ga0326728_10023422	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	11310	Open in IMG/M
3300033402\|Ga0326728_10117460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3081	Open in IMG/M
3300033402\|Ga0326728_10168705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2306	Open in IMG/M
3300033402\|Ga0326728_10218198	Not Available	1881	Open in IMG/M
3300033402\|Ga0326728_10233892	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300033405\|Ga0326727_10943449	Not Available	638	Open in IMG/M
3300033977\|Ga0314861_0480625	Not Available	535	Open in IMG/M
3300033983\|Ga0371488_0278790	Not Available	808	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.64%
Host-Associated	Host-Associated	1.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.38%
Aquatic	Environmental → Aquatic	46.26%
Plants	Host-Associated → Plants	1.36%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	46.26%
Soil	Environmental → Terrestrial → Soil	33.33%
Peat	Environmental → Terrestrial → Peat	19.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.36%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	45.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.61%
Loam	Environmental → Terrestrial → Soil → Loam	2.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.36%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.68%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	40.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.36%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.68%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	20.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	17.69%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	8.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.80%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.44%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.76%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.08%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.08%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.72%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.04%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.36%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.36%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025444	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)	Environmental	Open in IMG/M
3300025446	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1009979521	3300004092	Bog Forest Soil	MAGNNVGKGSMTKKEQFLAFVWVGALAQDFSCKTNDTSLIMHIASRIPEDHIPDNVMNAAKVFLAYCNGVCKRPYHWMLAR*
Ga0062389_1045296752	3300004092	Bog Forest Soil	WKGTMSKKEQFLAFVLVGALAQEFGQKSGDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARN*
Ga0062386_1001519503	3300004152	Bog Forest Soil	MSKKEQFLAFVLVGALAQEFGRKSDDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCEKPHDWMLARG*
Ga0070714_1018926831	3300005435	Agricultural Soil	MTKKEQFLAFVLVGALAQDYATQSNDLPLMMRMAAQIPEDDIPENPMNAAKVFLAFCNGVVKRPHKWMLKAA*
Ga0070679_1012664271	3300005530	Corn Rhizosphere	MSKKEQFLAFVLVGALAQDSVNNSNDLPLMMRLAADIPEDCIPENPMNAAKVFLAFCNGVCKRPHKWMVARN*
Ga0075522_100047046	3300006638	Arctic Peat Soil	MSKKQQFLGFVLAGAVAQEAGEKTSDTELIMEIAGQIPEERIPANIMNAARVFLAFCHGESKRPHRWMLGRAK*
Ga0116225_12090021	3300009524	Peatlands Soil	MSKKEQFLAFVLVGAMAQDISTKSNDCPLIMHMAGQIPEDRIPDNVINAAKVFLAFCNGVCKRPHDWMLAHN*
Ga0116136_11556271	3300009547	Peatland	MMERVYMSKKEQFLAFVLVGAMAQDISIKSHDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHD
Ga0116107_10080432	3300009548	Peatland	MMERVYMSKKEQFLAFVLVGAMAQDISIKSHDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHK*
Ga0116127_10199051	3300009618	Peatland	MTNVAGEHGRKNDGKGLMSKREQFLAFVWVGALAQDFGRKSNDTPLIMHIASQIPPEQIPDNVMNAAKVFLAFCNGICKRPHHWMLARRRF*
Ga0116114_10469222	3300009630	Peatland	MTKKEQFLAFILAGATAQDISTESNDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHK*
Ga0116132_11328542	3300009646	Peatland	MMERVYMSKKEQFLAFVLVGAMAQDISIKSHDCPLIMHMAGQIPEDLIPDNVMNAAKVFLAFCNGVCNGPHDWMLAHK*
Ga0116215_15147391	3300009672	Peatlands Soil	MMERVYMSKKEQFLAFVLVGAMAQDISTKSNDCPLIMHMAGQIPEDRIPDNVINAAKVFLAFCNGVCKRPHDWMLAHN*
Ga0116217_100421482	3300009700	Peatlands Soil	MSKKEQFLAFVLVAAMAQDVSLQSNDCPLIMHMAGQIPEERIPDNVMNAAKVFLAFCNGVCKRPHGWMLARR*
Ga0074045_100994091	3300010341	Bog Forest Soil	KREQFLAFVWVGALAQDFSQNSHEAPLIMHIASRIPPDQIPDNVMNAAKVFLAFCNGVCKRPHHWMLPPQRRS*
Ga0074045_103669362	3300010341	Bog Forest Soil	MSKKEQFLAFVLVGALAQEFGRKSDDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARS*
Ga0074045_104056241	3300010341	Bog Forest Soil	MTKKEQFMAFILVGATARDINAETNDAQLILHIAGQIPEDAIPENIMNAAKVFLAF
Ga0074045_104261892	3300010341	Bog Forest Soil	VKLWAENDGKGFMSKKEQFLAFVLVGALAQDISTESNDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLARK*
Ga0136449_1004810232	3300010379	Peatlands Soil	MSKREQFLAFVWVGAAAQDFGRKTTDAALIMHIASQIPEDHIPDNVMNAAKVFLAFCSGLCKRPHHWMLARR*
Ga0181539_100074416	3300014151	Bog	MTKKEQFLAFVLVGALAQDVSTASHDCPLIMHIATQIPEDRIPENLINAAKVFLAFCNGVCKRPHNWMLARK*
Ga0181539_10356882	3300014151	Bog	MSKKEQFLAFVWVGAMAQDISTQSNDCRLILHIAAQIPEDRIPDNVMNAAKVFLAFCNGICQRPHDWMLARK*
Ga0181527_10044017	3300014153	Bog	MSMRMEETGAENNGKGLMTKKEQFLAFVLVGALAQDVSTASHDCPLIMHIATQIPEDRIPENLINAAKVFLAFCNGVCKRPHNWMLARK*
Ga0181518_1000061818	3300014156	Bog	MSKKEQFLAFVLVAAKAQDISTKNNDCPLIMHIAGQIAEDQIPDNVMNAAKVFLAFCNGVCKKPHAWMVARK*
Ga0181518_102121322	3300014156	Bog	MTKKEQFLAFVLVGALAQDVCTQSHDCALIMHVATQIPEDRIPKNAMNAAKVFLAFCNGVCKRPHNWMLARN*
Ga0181518_102385751	3300014156	Bog	KGLMTKKEQFLAFVLVGALAQDVSTASHDCPLIMHIATQIPEDRIPENLINAAKVFLAFCNGVCKRPHNWMLARK*
Ga0181521_104207972	3300014158	Bog	VNDGKGHMSKKEQFLAFVLVGALAQDLRDKCNDCPLIMHIAGQIPEERIPDNVMNAAKVFLAFCNGICKRPHDWMLARN*
Ga0181530_100757403	3300014159	Bog	MSKKEQFLAFVLVGALAQDLRDKCNDCPLIMHIAGQIPEERIPDNVMNAAKVFLAFCNGICKRPHDWMLARN*
Ga0181530_102022403	3300014159	Bog	MSKREQFLAFVWVGALAQDFSQKSNDAPLIMHIASRIPPDQIPDNVMNAAKVFLAFCSGLCKLPHHWMLPRRHF*
Ga0181530_105956062	3300014159	Bog	MSKREQFLAFVWVGALVQDFSRKSNDATLIMPIATQIPEDRIPDNVMNAAKVFLAFCNGLCKRPHHWMLARR*
Ga0181517_101026381	3300014160	Bog	MSKREQFLAFVRVEALAQDFGRNSNDTPLMMHMASQIPPDQIPDNVMNAAKVFLAFCNGICKRPHHWMLPRRRF*
Ga0181529_100679134	3300014161	Bog	MSMRVGETVRKNDGKGNMSKKEEFLAFVLVGATAQDISTGNNDCPLIMHLAGQIPEERVPDNVINAAKVFLAFCNGVCERPHAWMLAHK*
Ga0181538_100283142	3300014162	Bog	LFLVAEPASGRPKEQFLAFVLVGALAREFGRKSDDASLIMHIASQIPEEKIPENAMNAAKVFLAFCNGVCKKTHNWMLARS*
Ga0181532_100029308	3300014164	Bog	LFLVAEPASGRPKEQFLAFVLVGALAREFGRKSGDASLIMHIASQIPEEKIPENAMNAAKVFLAFCNGVCKKTHNWMLARS*
Ga0181532_101762351	3300014164	Bog	MSNGTGDHDGKNDGKGLMSKREQFLAFVWVGALARDFNQKSNDTSLIIHIASQIPEEQIPDNVLNAAKVFLAFCHGVCKRPHHWMLRRS*
Ga0181528_100949654	3300014167	Bog	MTKKEQFLAFIIVGAMAQDVTLGSNDCPVILHIAEQIPEEKIPHNVMNAAKVFLAFCNGATLRPHKWMLARK*
Ga0181535_100684862	3300014199	Bog	MGKNAGDMSKKEQFLAFVWVGALAQDFSRKTSDTALIMHIASRIPDENIPDNAMNAAKVFLAYCNGLCKRPYPWMLAKR*
Ga0181535_101934092	3300014199	Bog	MSKKEQFLAFVWVGAMAQDINTQSNDCRLILHIAAQIPEDRIPDNVMNAAKVFLAFCNGICQRPHDWMLARK*
Ga0181526_105675372	3300014200	Bog	MSKREQFLAFVWVGALAQDFGRKSNDTPLIMHMASQIPPDQIPDNVMNAAKVFLAFCNGICKRPHHWMLARRRF*
Ga0182018_100256244	3300014489	Palsa	MSKREQFLAFVWVGAIAQDFNVKSNDTSLIMRIASQIPEERIPDDVKDAAKVFLAFCNGVRKRPRHWMLARTQT*
Ga0182018_102808911	3300014489	Palsa	MSKREQFLAVVCVGALAQDFNGKSNDTSLIMHIASQIPEDRIPDDVINAAKVFLAFCNGVCKRPPRWMLARMQK*
Ga0182014_101964453	3300014491	Bog	MSKKEQFLAFVLVGAMAQDISARSNDCRLILHIAGQIPEGRIPENAMNAARVFLAFCNGICQRPPDWMLARK*
Ga0182013_100512093	3300014492	Bog	MGKIEKGPMSKKEQFLAFVLVGALAQQVGRESDDASLIMHIAGQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARS*
Ga0182013_100789592	3300014492	Bog	MKIRAHGQAMSKRADKIVGKNYGKGFMSKKEQFLAFVLVGATAQDISTGNNDCSLIMHMAGQIPEDQIPDNVFNAAKVFLAFCNGICKQPHPWMLARN*
Ga0182013_101369443	3300014492	Bog	MSKKEQFLAFVLVGATVQDISTDNNDCPLILHLASQIPEERIPDNVTNAAKVFLAFCNGVCERPHGWMVAAKAES*
Ga0182013_102594071	3300014492	Bog	RWIRFMSKKEQFLAFVLVGAMAQDISARSNDCRLILHIAGQIPEGRIPDNAMNAARVFLAFCNGICQRPPDWMLARK*
Ga0182016_100175961	3300014493	Bog	MSKREQFLAFVWVGAVAQDFGRKSNDTPLIMHIASQIPPEQIPDNVMNAAKVFLAFCNGICKRPHHWMLPRRRF*
Ga0182017_105499511	3300014494	Fen	MSKKEQFLAFVLVGAMAQDITNESNDCPLIMHMAGQIPEDRIPDNVTNAAKVFLAFCNGVCKRPHAWMLARM*
Ga0182019_110627031	3300014498	Fen	MSKKEQFLAFVLVGAMAQDVSTKSNDCPLIMHMAGQIPEERIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHN*
Ga0182024_1000115945	3300014501	Permafrost	MARNNEKGIMSKREQFLAFVWVGAVAQDFSRKTSDSSLIVQLASAIPEDHIPDNAMNAAKVFLAYCNGISKRPFHWMLARKKPKG*
Ga0182024_100514553	3300014501	Permafrost	MAGNNVEKGFMSKKEQFLAFVWVGALAQDFSRKTNDTSLIMHIASRIPEDHIPDNVMNAAKVFLAYCNGLCKRPYHWMLARE*
Ga0182024_119008471	3300014501	Permafrost	MTKKEQFLGFVFVGAIVQDISNDSHDCGLIMHIASQIPEEKIPENVMNAAKVFLAFSNGVCPRPHNWMLARN*
Ga0182030_100662833	3300014838	Bog	MTKKEQFLAFVKVGAQAQDSTLEVNDSPLILHVAGQIPEERIPGNPMNAAKVFLAFCNGVCPKPHDWMMPRK*
Ga0182030_113531611	3300014838	Bog	MGNNGKGLMSKKEQFLAFVLVGALARECGQQSGDASLIMHIASQIPEEKIPENAMNAAKVFLAFCNGACKKPHNWMLARN*
Ga0182027_100025857	3300014839	Fen	MSKKEQFLAFVLVGATAQDLSTESHDCPLIMHMAGQIPEDRIPDNVTNAAKVFLAFCNGVCKRPHAWMLARQ*
Ga0182027_100701385	3300014839	Fen	MTKKEQFLAFVLVGALAQDVSTESHDCALIMHIATQIPEERIPDNVINAAKVFLAFCNGVCKQPHNWMLAAT*
Ga0182027_101431304	3300014839	Fen	MSKKEQFLAFVLVGATAQDLSTESNDCPLIMHMAGQIPEERIPDNVINAAKVFLAFCNGVCKRPHAWMLARQ*
Ga0182027_107638703	3300014839	Fen	MSKKQQFLAFVQVGAKAQDISTENNDCPLIMHVAGQIPEDQIPGNPMNAAKVFLAFCNGVCKRPHAWMMPQN*
Ga0181505_107183692	3300016750	Peatland	LFLVAEPASGRPKEQFLAFVLVGALAREFGRKSGDASLIMHIASQIPEEKIPENAMNAAKVFLAFCNGVCKKTHN
Ga0187849_11676261	3300017929	Peatland	VAGEHGRKNDGKGLMSKREQFLAFVWVGALAQDFGRKSNDTPLIMHIASQIPPEQIPDNVMNAAKVFLAFCNGICKRPHHWMLARRRF
Ga0187848_100044029	3300017935	Peatland	MERVYMSKKEQFLAFVLVGAMAQDISIKSHDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHK
Ga0187848_101393711	3300017935	Peatland	MESYSLGQPMSNGTGDHDGKNDGKGLMSKREQFLAFVWVGALARDFNQKSNDTSLIMHIASQIPEEQIPDNVLNAAKVFLAFCHGVCKRPHHWMLRRS
Ga0187848_104163692	3300017935	Peatland	MSKREQFLAFVWVGALAQDFSQKSNDAPLIMHIASRIPPDQIPDNVMNAAKVFLAFCSGLCKLPHHWMLPRRHF
Ga0187853_101575471	3300017940	Peatland	MSKKEQFLAFVLVGAMAQDISIKSHDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHK
Ga0187879_102322882	3300017946	Peatland	MSKREQFLAFVWVGALAQDFGRKSNDTPLIMHMASQIPPDQIPDNVMNAAKVFLAFCNGICKRPHHWMLARRRF
Ga0187847_105059932	3300017948	Peatland	MTKKEQFLAFIIVGAMAQDVTLGSNDCPVILHIAEQIPEEKIPHNVMNAAKVFLAFCNGATLRPHKWMLARK
Ga0181520_100705034	3300017988	Bog	MSKRLQFLAFVLADASAQDISNGNNDCPLIMHLAGQIPEKQIPDNVRNAAKVFLAFCNGACKQPHPWMLARRQ
Ga0181520_101572982	3300017988	Bog	MSKKEQFLAFVWVGAMAQDINTQSNDCRLILHIAAQIPEDRIPDNVMNAAKVFLAFCNGLCQRPHDWMLARK
Ga0181520_102502522	3300017988	Bog	MAGDNNEMGFMSKKEQFLAFVWVGALAQDVSRETNETALIMHIASRIPEEHIPDNVMNAAKVFLAYCNGLCKRPHHWMLARG
Ga0181520_103062332	3300017988	Bog	MRVGETVRKNDGKGNMSKKEEFLAFVLVGATAQDISTGNNDCPLIMHLAGQIPEERVPDNVINAAKVFLAFCNGVCERPHAWMLAHK
Ga0181520_103131421	3300017988	Bog	MSKKEQFLAFVLVGALAQDISARSNDCRLILHIAGQIPEGRIPENAMNAARVFLAFCNGICQRPPDWMLART
Ga0181520_107781921	3300017988	Bog	CVKLGAENDGKGFMSKKEQFLAFVLAGATAQDMSTANHDCPLIMHMAGQIPEDRIPDNVTNAAKVFLAFCNGVCKRPHPWMLARQ
Ga0181520_110931631	3300017988	Bog	MSKKEQFLAFVLAGAEAQDTCTENNDSPLITHVAGQIPEERIPENVTNAAKVYLAFCNGACKPHPWMFPRKC
Ga0187891_11747772	3300017996	Peatland	VKLRAENDGKGFMTKKEQFLAFILAGATAQDISTESNDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHK
Ga0187876_12454651	3300018003	Peatland	GWVKLRAENDGKGFMTKKEQFLAFILAGATAQDISTESNDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHK
Ga0187873_10872213	3300018013	Peatland	FMSKKEQFLAFVLVAAMAQDVSLQSNDCPLIMHMAGQIPEERIPDNVMNAAKVFLAFCNGVCKRPHGWMLARR
Ga0187860_10722754	3300018014	Peatland	MTKKEQFLAFILAGATAQDISTESNDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHK
Ga0187874_100451963	3300018019	Peatland	MMERVYMSKKEQFLAFVLVGAMAQDISIKSHDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHK
Ga0187881_102656111	3300018024	Peatland	AIMAEKNDENGLMSKKKQFLAFVWVGALAQDFSRKTNDASLIMHIASRIPEENIPDNIMNAAKVFLAYCNGLCKRPHHWMLACG
Ga0187881_104057632	3300018024	Peatland	KERNQRAMESYSHGQGMTNVAGEHGRKNDGKGLMSKREQFLAFVWVGALAQDFGRKSNDTPLIMHIASQIPPEQIPDNVMNAAKVFLAFCNGICKRPHHWMLARRRF
Ga0187867_103336582	3300018033	Peatland	MSKKEQFLAFVLVAAKAQDISTKNNDCPLIMHIAGQIAEDQIPDNVMNAAKVFLAFCNGVCKKPHAWMVARK
Ga0187867_104471411	3300018033	Peatland	MSKKEEFLAFVLAGATAQDGSTGSNDCPLIMHIASQIQEERIPDNVMNAAKVFLAFCNGVCTRPHDWMLARK
Ga0187867_106774121	3300018033	Peatland	MAGNNVEKGPMSKREQFLAFVWVGALAQDFSRKTNDTALIMHIASRIPEDHIPENVMNAAKVFLAYCNGLCKRPHL
Ga0187863_103570301	3300018034	Peatland	EQFLAFVLAGATAQDMSTANHDCPLIMHMAGQIPEDRIPVNVTNAAKVFLAFCNGVCKRPHPWMLARQ
Ga0187863_107465082	3300018034	Peatland	MSKKEQFLAFVLAAATAQDICTENKDCPLIMHMAAQIPEDRIPDNITNAAKVFLAFCNGVCKRPHPWMLARQ
Ga0187875_100424944	3300018035	Peatland	GKNDGKGLMSKREQFLAFVWVGALARDFNQKSNDTSLIMHIASQIPEEQIPDNVLNAAKVFLAFCHGVCKRPHHWMLRRS
Ga0187875_101089884	3300018035	Peatland	PGESPAFLFLVAEPASGRPKEQFLAFVLVGALAREFGRKSDDASLIMHIASQIPEEKIPENAMNAAKVFLAFCNGVCKKTHNWMLARS
Ga0187875_101196662	3300018035	Peatland	MSKREQFLAFVWVGALAQDFGRKSNDTPLIMHMASQIPPDQIPDNVMNAAKVFLAFCNGICKRPHHWMLPRRRF
Ga0187875_105392872	3300018035	Peatland	MSKKEQFLAFVLAGATAQDMSTANHDCPLIMHMAGQIPEDRIPDNVTNAAKVFLAFCNGVCKRPHPWMLARQ
Ga0187855_104427252	3300018038	Peatland	MSMRVGETVRKNDGKGNMSKKEEFLAFVLVGATAQDISTGNNDCPLIMHLAGQIPEERVPDNVINAAKVFLAFCNGVCERPHAWMLAHK
Ga0187871_100409852	3300018042	Peatland	MSRRVCETGAQNHGKGIMSKKEQFLAFVSVGAKAQDISTNNNDCPLIVHIAGQISEDQIPDNVVNAAKVFLAYCNGACKKPHPWMMARK
Ga0187890_102280193	3300018044	Peatland	LFLVAEPASGRPKEQFLAFVLVGALAREFGRKSGDASLIMHIASQIPEEKIPENAMNAAKVFLAFCNGVCKKTHNWMLARS
Ga0187890_108835921	3300018044	Peatland	MSKKEQFLAFVLVGAMAQDVSTESHDCPLIMHIACQIPEERIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHN
Ga0187851_107009391	3300018046	Peatland	NDGKGYMSKRLQFLAFVLADASAQDISNGNNDCPLIMHLAGQIPEKQIPDNVRNAAKVFLAFCNGACKQPHPWMLARRQ
Ga0187858_101836932	3300018057	Peatland	TKKEQFLAFILAGATAQDISTESNDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLAHK
Ga0187770_104759532	3300018090	Tropical Peatland	MSKKEQFLAFVLVGALAQDLRDDCNDCPLIMHIANQIPEEKIPDNVMNAAKVFLAFCHGLCKRPHDWMLARN
Ga0224534_10583252	3300022524	Soil	KGFMSKKEQFMAFVLVGAMAQDISTESNDCPLIIHMAGQIPEERIPDNVMNAAKVFLAFCNGVCKRPHEWMLAHK
Ga0224553_10184961	3300022875	Soil	MSKKEQFLAFVLVGAMAQDISARSNDCRLILHIAGQIPEGRIPENAMNAARVFLAFCNGICQRPPDWML
Ga0224555_10315802	3300023088	Soil	MSKKEQFLAFVLVGAMAQDISTQSNDCRLILHIAAQIPEDRIPDNVMNAAKVFLAFCNGICLRPHDWMLARK
Ga0224557_10574392	3300023101	Soil	MSKRADKIVGKNYGKGFMSKKEQFLAFVLVGATAQDISTGNNDCSLIMHMAGQIPEDQIPDNVFNAAKVFLAFCNGICKQPHPWMLARN
Ga0224557_10672482	3300023101	Soil	MSKKEQFLAFVLVGATAQDLSTESHDCPLIMHMAGQIPEDRIPDNVTNAAKVFLAFCNGVCKRPHAWMLARQ
Ga0224557_12105641	3300023101	Soil	MSKKEQFLAFVLVGAMAQDISARSNDCRLILHIAGQIPEGRIPDNAMNAARVFLAFCNGICQRPPDWMLA
Ga0208189_10649932	3300025444	Peatland	MTKKEQFLAFILAGATAQDISTESNDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHNWMLARN
Ga0208038_10454531	3300025446	Peatland	MESYSHGQGMTNVAGEHGRKNDGKGLMSKREQFLAFVWVGALAQDFGRKSNDTPLIMHIASQIPPEQIPDNVMNAAKVFLAFCNGICKRPHHW
Ga0208717_11353571	3300025574	Arctic Peat Soil	DPMSKKQQFLGFVLAGAVAQEAGAKTSDTELIMEIARQIPEERIPANIMNAARVFLAFCHGDSKRPHRWMLRRSK
Ga0209483_10042606	3300025862	Arctic Peat Soil	MSKKQQFLGFVLAGAVAQEAGEKTSDTELIMEIAGQIPEERIPANIMNAARVFLAFCHGESKRPHRWMLGRAK
Ga0207652_117825652	3300025921	Corn Rhizosphere	MSKKEQFLAFVLVGALAQDSVNNSNDLPLMMRLAADIPEDCIPENPMNAAKVFLAFCNGVCKRPHKWMVARN
Ga0208565_12324141	3300027662	Peatlands Soil	MSKKEQFLAFVLVGAMAQDISTKSNDCPLIMHMAGQIPEDRIPDNVINAAKVFLAFCNGVCKRPHDWMLAHN
Ga0209039_102003072	3300027825	Bog Forest Soil	MDADCPTEQAIMGRTGKGPIMSKKEQFLAFVLVGALAQEFGRKSDDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCEKPHDWMLARG
Ga0209517_103190081	3300027854	Peatlands Soil	MSKKEQFLAFVLVGAMAQDLSTKSNDCPLIMHMAGQIPEDRIPDNVTNAAKVFLAFCNGVCKRPHEWMLAHN
Ga0209517_103759571	3300027854	Peatlands Soil	MAGNEDVMGPMSKREQFLAFVWVGAAAQDFGRKTTDAALIMHIASQIPEDHIPDNVMNAAKVFLAFCSGLCKRPHHWMLARR
Ga0209517_104207692	3300027854	Peatlands Soil	MSKKEQFLAFVLVAAMAQDVSLQSNDCPLIMHMAGQIPEERIPDNVMNAAKVFLAFCNGVCKRPHGWMLARR
Ga0247275_10571032	3300029817	Soil	MTKKEQFLAFVLVGALAQDVCTQSHDCALIMHVATQIPEDRIPKNAMNAAKVFLAFCNGVCKRPHDWMLAHK
Ga0247275_11772061	3300029817	Soil	MSKKEQFLAFVLVGAMAQDISIKSHDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHAWMLAHN
Ga0246001_10891831	3300029889	Peat	MSNGTGDHDGKNDGKGLMSKREQFLAFVWVGALARDFNQKSNDTSLIMHIASQIPEEQIPDNVLNAAKVFLAFCHGVCKRPHHWMLRRS
Ga0302325_105206593	3300031234	Palsa	MSNKEQFLAFVYAGALAQDFSRKTNETALIMHLANCIPEDHIPDNAINAAKVFLAYCNGFCKLPHHWMLARG
Ga0302325_113711723	3300031234	Palsa	MSKKEQFLAFVLVGALAQDAKSHGNDTSLMMHMANLIPEDQIPDNVMNAAKVFLAFCAGLSKRPHPWMMARAK
Ga0302324_1014107641	3300031236	Palsa	MGKNGKGIMSKKEQFMAFVLVGALAQEFGRKSGDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARS
Ga0265327_100026076	3300031251	Rhizosphere	MTKKEQFLAFVLVGALAQDYATNSNDLPLMMRMASQIPEDDIPENPMNAAKVFLAFCNGVVKRPHKWMLKVQ
Ga0302320_100428706	3300031524	Bog	MSKKEQFLAFVLVGATVQDISTDNNDCPLILHLASQIPEERIPDNVTNAAKVFLAFCNGVCERPHGWMVAAKAES
Ga0302320_100980721	3300031524	Bog	MGKIEKGPMSKKEQFLAFVLVGALAQQVGRESDDASLIMHIAGQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARS
Ga0302320_102126533	3300031524	Bog	MSIRGGQTAGKRWKGIMTKKEQFLAFVLVGAMAQDVTLGSNDCPVILHFAEQIPEENIPRNVANAAKVFLAFCNGVCLRPHGWMLARK
Ga0302320_122412491	3300031524	Bog	KGLMSKKEQFLAFVLVGALARECGQQSGDASLIMHIASQIPEEKIPENAMNAAKVFLAFCNGACKKPHNWMLARN
Ga0302326_110448472	3300031525	Palsa	FMAFVWVGALAQDFSHKTNDTPLIVQIASSIPEDHIPDNVMNAAKVFLAYCNGVCKRPYRWMLARE
Ga0265313_101341833	3300031595	Rhizosphere	MGKIGKGLMSKKEQFLAFVLVGALAQDFGRKSGDASLIMHIAGQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARS
Ga0310686_1085068201	3300031708	Soil	KQIGTPRRTCLPGQKCPAEQAIMGKIGKGLMSKKEQFLAFVLVGALAQEFGRKSGDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARS
Ga0310686_1123809077	3300031708	Soil	MSKKEQFLAFVWVGALAQDFSRKSNDTPLILHIAGGIPEDHIPDNVMNAAKVFLAYCNGVCKRPYRWMLARG
Ga0310686_11556952210	3300031708	Soil	MSKKEQFLAFVWVGALAQDFSLKTNDTPLIMDIANRIPEDDIPDDVMNAAKVFLAYCNGLCKRPYHWMLARG
Ga0310686_1156494871	3300031708	Soil	MTKKEQFLGFVFVGAIAQDISNDSHDCGLIMHIASQIPEEKIPENVMNAAKVFLAFSNGVCPRPHNWMLARK
Ga0307476_108344581	3300031715	Hardwood Forest Soil	MSSVAGDHGGKMMKGIMSKREQFLAFVWVGALAQDFNGKTNDTSLIMHIASQIPEGRIPDNVMNAAKVFLAFCNGVCKRPHHWMLARTQP
Ga0311301_1001284213	3300032160	Peatlands Soil	MERVYMSKKEQFLAFVLVGAMAQDISTKSNDCPLIMHMAGQIPEDRIPDNVINAAKVFLAFCNGVCKRPHDWMLAHN
Ga0311301_102261552	3300032160	Peatlands Soil	MSKKERFLAFVLVAAMAQDVSLQSNDCPLIMHMAGQIPEERIPDNVMNAAKVFLAFCNGVCKRPHGWMLARR
Ga0316226_10229355	3300032562	Freshwater	MAGDNVGPMSKREQFLAFVWVGALAQDFSRKTNDSELIMHIASRIPEDNIPDNVMNAAKVFLAYCNGLCKRPHHWMLAHG
Ga0335069_113276761	3300032893	Soil	MSNQAGILGGKNGKGVMSKKEQFLAFVLVGAMAQDVSKQSNDCPLIMHTAGQIPEEQIPDNVMNAAKVFLAYCNGVYERPHAWMLIRR
Ga0326728_1000084787	3300033402	Peat Soil	MAGNNDGKGFMSKREQFLAFVWVGALAQDFSRNTNDTALIMDIASRIPEDHIPDNVMNAAKVFLAFCNGLCKRPHLWMLARR
Ga0326728_1000148816	3300033402	Peat Soil	MSKKEQFLAFVLVGAMAQDLSTKSNDCPLIMHMAGQIPEDRIPDNVTNAAKVFLAFCNGVCTRPHDWMLARN
Ga0326728_1000445811	3300033402	Peat Soil	MSKREQFLAFVWVGALAQDLGGKTNDTALIMHIASQIPEDRIPDNVMNAAKVFLAFCNGLCKRPHHWMLARR
Ga0326728_1000483437	3300033402	Peat Soil	MTKKEQFLAFILAGATAQDISTESNDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCKRPHDWMLARK
Ga0326728_1000743013	3300033402	Peat Soil	MDGDCPTVQAIMGKTGKGLIMSKKEQFLAFVLVGALAQEFGRKSDDASLIMHVASQIPEERIPENAMNAAKVFLAFCNGVCKTPHDWMLARS
Ga0326728_100209884	3300033402	Peat Soil	MSKKEQFLAFVLVGALAQECGAKNGDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARG
Ga0326728_1002342210	3300033402	Peat Soil	MGTIGKGLMSKKEQFLAFVLVGALAQEFGPKRGDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARS
Ga0326728_101174602	3300033402	Peat Soil	MSKKEQFLAFVLVGAMAQDLSNESHDCPLIMHMAGQIPEDRIPDNVMNAAKVFLAFCNGVCERPHAWMLARL
Ga0326728_101687053	3300033402	Peat Soil	MSKKEQFLAFVWVGAMAQDISTQSNDCRLILHIAAQIPEDRIPDNVMNAAKVFLAFCNGLCQRPHDWMLARK
Ga0326728_102181981	3300033402	Peat Soil	MEQAIMGTIGKGLMSKKEQFLAFVLVGALAQEFGPKSGDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCKKTHNWMLARS
Ga0326728_102338922	3300033402	Peat Soil	MGKIGKGLMSKKEQFLAFVLVGALAQEFGSKNGDASLIMHIASQIPEEKIPENAMNAAKVFLAFCNGVCKKPHNWMLARG
Ga0326727_109434492	3300033405	Peat Soil	LGRPGELVHKDGEDPAEQAIMGKLGKGLMSKKEQFLAFVLVGALAQEFGPKRGDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCKKPHNWMLARS
Ga0314861_0480625_244_462	3300033977	Peatland	MSKREQFLAFVLVGAIAQDMNNESNDSPLIMRIASEIPEEKIPDNVMNAAKVFLAFCNGICERPHDWMLARK
Ga0371488_0278790_1_192	3300033983	Peat Soil	MSKKEQFLAFVLVGALAQECGAKNGDASLIMHIASQIPEERIPENAMNAAKVFLAFCNGVCKKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048955

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences