Metagenome / Metatranscriptome Family F048885

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048885
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	63 residues
Representative Sequence	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Number of Associated Samples	94
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.43 %
% of genes near scaffold ends (potentially truncated)	22.45 %
% of genes from short scaffolds (< 2000 bps)	48.30 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (44.218 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil (29.252 % of family members)
Environment Ontology (ENVO)	Unclassified (65.306 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.347 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 14.49% Coil/Unstructured: 85.51%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF00285	Citrate_synt	55.78
PF00180	Iso_dh	6.80
PF02142	MGS	6.12
PF02787	CPSase_L_D3	2.72
PF00903	Glyoxalase	2.72
PF05746	DALR_1	2.72
PF00988	CPSase_sm_chain	2.04
PF08327	AHSA1	1.36
PF02786	CPSase_L_D2	1.36
PF01925	TauE	1.36
PF07843	DUF1634	0.68
PF06224	HTH_42	0.68
PF04014	MazE_antitoxin	0.68
PF02737	3HCDH_N	0.68
PF09858	DUF2085	0.68
PF01636	APH	0.68
PF01957	NfeD	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG0372	Citrate synthase	Energy production and conversion [C]	55.78
COG0505	Carbamoylphosphate synthase small subunit	Amino acid transport and metabolism [E]	4.08
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	2.72
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	2.72
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.36
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.68
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.68
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.68
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.68
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.68
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.68
COG4272	Uncharacterized membrane protein	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.78 %
Unclassified	root	N/A	44.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.10 %
Unclassified	root	N/A	44.22 %
Viruses	superkingdom	All Organisms → Viruses	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	42.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	2.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1.36 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.36 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	1.36 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.36 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1.36 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.36 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.36 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1.36 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.36 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.36 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1.36 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.36 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.36 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1.36 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.36 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1.36 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	1.36 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10000132	All Organisms → cellular organisms → Archaea	15534	Open in IMG/M
3300002558\|JGI25385J37094_10028868	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300002558\|JGI25385J37094_10096720	All Organisms → cellular organisms → Archaea	883	Open in IMG/M
3300002558\|JGI25385J37094_10108283	All Organisms → cellular organisms → Archaea	811	Open in IMG/M
3300002558\|JGI25385J37094_10157593	All Organisms → cellular organisms → Archaea	608	Open in IMG/M
3300002560\|JGI25383J37093_10026102	Not Available	1959	Open in IMG/M
3300002561\|JGI25384J37096_10106239	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300002562\|JGI25382J37095_10059949	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300002562\|JGI25382J37095_10192936	Not Available	619	Open in IMG/M
3300002562\|JGI25382J37095_10220296	All Organisms → cellular organisms → Archaea	573	Open in IMG/M
3300002908\|JGI25382J43887_10044408	All Organisms → cellular organisms → Archaea	2415	Open in IMG/M
3300002908\|JGI25382J43887_10103948	Not Available	1499	Open in IMG/M
3300002908\|JGI25382J43887_10121462	Not Available	1359	Open in IMG/M
3300002908\|JGI25382J43887_10221136	All Organisms → cellular organisms → Archaea	894	Open in IMG/M
3300002908\|JGI25382J43887_10431593	Not Available	557	Open in IMG/M
3300002912\|JGI25386J43895_10186375	Not Available	521	Open in IMG/M
3300005167\|Ga0066672_10683441	All Organisms → cellular organisms → Archaea	659	Open in IMG/M
3300005174\|Ga0066680_10108717	All Organisms → cellular organisms → Archaea	1704	Open in IMG/M
3300005176\|Ga0066679_10000027	All Organisms → cellular organisms → Archaea	29897	Open in IMG/M
3300005178\|Ga0066688_10016580	All Organisms → cellular organisms → Archaea	3797	Open in IMG/M
3300005180\|Ga0066685_10100855	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300005180\|Ga0066685_10395821	All Organisms → cellular organisms → Archaea	959	Open in IMG/M
3300005180\|Ga0066685_11026096	All Organisms → cellular organisms → Archaea	543	Open in IMG/M
3300005181\|Ga0066678_10008045	Not Available	4968	Open in IMG/M
3300005450\|Ga0066682_10001982	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	8544	Open in IMG/M
3300005518\|Ga0070699_100294923	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300005536\|Ga0070697_100502285	All Organisms → cellular organisms → Archaea	1060	Open in IMG/M
3300005536\|Ga0070697_102060840	All Organisms → cellular organisms → Archaea	511	Open in IMG/M
3300005556\|Ga0066707_10563916	Not Available	732	Open in IMG/M
3300005557\|Ga0066704_10997806	Not Available	517	Open in IMG/M
3300005558\|Ga0066698_10206622	All Organisms → cellular organisms → Archaea	1344	Open in IMG/M
3300005559\|Ga0066700_10321686	Not Available	1092	Open in IMG/M
3300005568\|Ga0066703_10221553	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300006794\|Ga0066658_10001127	All Organisms → cellular organisms → Archaea	9516	Open in IMG/M
3300006800\|Ga0066660_10017943	All Organisms → cellular organisms → Archaea	4056	Open in IMG/M
3300007255\|Ga0099791_10004171	All Organisms → cellular organisms → Bacteria	5914	Open in IMG/M
3300007265\|Ga0099794_10018760	All Organisms → cellular organisms → Archaea	3105	Open in IMG/M
3300007265\|Ga0099794_10022765	All Organisms → cellular organisms → Bacteria	2859	Open in IMG/M
3300007265\|Ga0099794_10224215	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	966	Open in IMG/M
3300009012\|Ga0066710_101957696	All Organisms → cellular organisms → Archaea	873	Open in IMG/M
3300009012\|Ga0066710_103305689	All Organisms → cellular organisms → Archaea	616	Open in IMG/M
3300009038\|Ga0099829_10824761	All Organisms → cellular organisms → Archaea	770	Open in IMG/M
3300009088\|Ga0099830_11113385	All Organisms → cellular organisms → Archaea	655	Open in IMG/M
3300009088\|Ga0099830_11700628	All Organisms → cellular organisms → Archaea	526	Open in IMG/M
3300009089\|Ga0099828_10290176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1471	Open in IMG/M
3300009090\|Ga0099827_10236317	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300009137\|Ga0066709_104249926	All Organisms → cellular organisms → Archaea	522	Open in IMG/M
3300010303\|Ga0134082_10257943	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	723	Open in IMG/M
3300010335\|Ga0134063_10245857	All Organisms → cellular organisms → Archaea	850	Open in IMG/M
3300012096\|Ga0137389_10760996	All Organisms → cellular organisms → Archaea	832	Open in IMG/M
3300012199\|Ga0137383_10082140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	2329	Open in IMG/M
3300012203\|Ga0137399_10065979	Not Available	2696	Open in IMG/M
3300012203\|Ga0137399_10616426	Not Available	912	Open in IMG/M
3300012206\|Ga0137380_10010563	All Organisms → cellular organisms → Archaea	8370	Open in IMG/M
3300012206\|Ga0137380_10058070	All Organisms → cellular organisms → Bacteria	3542	Open in IMG/M
3300012206\|Ga0137380_10063231	All Organisms → cellular organisms → Archaea	3387	Open in IMG/M
3300012206\|Ga0137380_10165209	All Organisms → cellular organisms → Archaea	2017	Open in IMG/M
3300012206\|Ga0137380_10177253	All Organisms → cellular organisms → Archaea	1939	Open in IMG/M
3300012209\|Ga0137379_10239718	All Organisms → cellular organisms → Archaea	1727	Open in IMG/M
3300012349\|Ga0137387_10252755	All Organisms → Viruses → Predicted Viral	1271	Open in IMG/M
3300012349\|Ga0137387_10923769	Not Available	629	Open in IMG/M
3300012350\|Ga0137372_10285457	All Organisms → cellular organisms → Archaea	1284	Open in IMG/M
3300012351\|Ga0137386_10061475	Not Available	2610	Open in IMG/M
3300012353\|Ga0137367_10045647	All Organisms → cellular organisms → Archaea	3315	Open in IMG/M
3300012358\|Ga0137368_10062635	Not Available	3064	Open in IMG/M
3300012362\|Ga0137361_10021449	All Organisms → cellular organisms → Archaea	4928	Open in IMG/M
3300012363\|Ga0137390_10474907	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300012363\|Ga0137390_11167044	All Organisms → cellular organisms → Archaea	718	Open in IMG/M
3300012376\|Ga0134032_1094059	Not Available	576	Open in IMG/M
3300012380\|Ga0134047_1130071	Not Available	923	Open in IMG/M
3300012397\|Ga0134056_1134658	All Organisms → cellular organisms → Archaea	592	Open in IMG/M
3300012918\|Ga0137396_10178775	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300012918\|Ga0137396_11038168	Not Available	591	Open in IMG/M
3300012976\|Ga0134076_10463527	All Organisms → cellular organisms → Archaea	574	Open in IMG/M
3300017656\|Ga0134112_10022586	All Organisms → cellular organisms → Archaea	2172	Open in IMG/M
3300018433\|Ga0066667_11599541	All Organisms → cellular organisms → Archaea	580	Open in IMG/M
3300018468\|Ga0066662_10018913	All Organisms → cellular organisms → Archaea	3812	Open in IMG/M
3300018468\|Ga0066662_11723142	All Organisms → cellular organisms → Archaea	655	Open in IMG/M
3300021046\|Ga0215015_10225081	All Organisms → cellular organisms → Archaea	1129	Open in IMG/M
3300021088\|Ga0210404_10140613	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300026296\|Ga0209235_1000214	All Organisms → cellular organisms → Archaea	27943	Open in IMG/M
3300026296\|Ga0209235_1019195	All Organisms → cellular organisms → Archaea	3675	Open in IMG/M
3300026296\|Ga0209235_1043240	All Organisms → cellular organisms → Archaea	2225	Open in IMG/M
3300026296\|Ga0209235_1066443	Not Available	1662	Open in IMG/M
3300026296\|Ga0209235_1079318	Not Available	1470	Open in IMG/M
3300026297\|Ga0209237_1037827	All Organisms → cellular organisms → Archaea	2556	Open in IMG/M
3300026297\|Ga0209237_1095989	All Organisms → cellular organisms → Archaea	1314	Open in IMG/M
3300026301\|Ga0209238_1001915	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	8163	Open in IMG/M
3300026301\|Ga0209238_1242490	All Organisms → cellular organisms → Archaea	535	Open in IMG/M
3300026324\|Ga0209470_1002506	All Organisms → cellular organisms → Archaea	13022	Open in IMG/M
3300026325\|Ga0209152_10000342	All Organisms → cellular organisms → Archaea	22647	Open in IMG/M
3300026328\|Ga0209802_1273047	Not Available	567	Open in IMG/M
3300026333\|Ga0209158_1165051	All Organisms → cellular organisms → Archaea	804	Open in IMG/M
3300026528\|Ga0209378_1310848	Not Available	506	Open in IMG/M
3300026532\|Ga0209160_1005544	All Organisms → cellular organisms → Archaea	9943	Open in IMG/M
3300026536\|Ga0209058_1159577	All Organisms → cellular organisms → Archaea	1039	Open in IMG/M
3300026537\|Ga0209157_1067308	All Organisms → cellular organisms → Bacteria	1813	Open in IMG/M
3300026540\|Ga0209376_1141777	All Organisms → cellular organisms → Archaea	1163	Open in IMG/M
3300027655\|Ga0209388_1000822	All Organisms → cellular organisms → Bacteria	6891	Open in IMG/M
3300027671\|Ga0209588_1016391	All Organisms → cellular organisms → Archaea	2287	Open in IMG/M
3300027862\|Ga0209701_10069509	Not Available	2231	Open in IMG/M
3300027875\|Ga0209283_10352236	All Organisms → cellular organisms → Archaea	966	Open in IMG/M
3300027875\|Ga0209283_10787530	All Organisms → cellular organisms → Archaea	586	Open in IMG/M
3300027882\|Ga0209590_11037736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	510	Open in IMG/M
3300028536\|Ga0137415_10142997	All Organisms → cellular organisms → Archaea	2231	Open in IMG/M
3300028673\|Ga0257175_1081366	Not Available	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.96%
Loam	Environmental → Terrestrial → Soil → Loam	2.04%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	57.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.36%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	29.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_1000013211	3300002558	Grasslands Soil	VTGLTSVVVSGQMFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
JGI25385J37094_100169621	3300002558	Grasslands Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
JGI25385J37094_100206122	3300002558	Grasslands Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
JGI25385J37094_100288681	3300002558	Grasslands Soil	RMFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR*
JGI25385J37094_100967202	3300002558	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
JGI25385J37094_101082831	3300002558	Grasslands Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
JGI25385J37094_101575932	3300002558	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
JGI25383J37093_100261022	3300002560	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
JGI25383J37093_100445762	3300002560	Grasslands Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR*
JGI25383J37093_101747232	3300002560	Grasslands Soil	SCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
JGI25384J37096_101062392	3300002561	Grasslands Soil	MFTCTKCDKREFQITQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
JGI25382J37095_100599492	3300002562	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKVEKWIPAKRN*
JGI25382J37095_101168372	3300002562	Grasslands Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKVEKWIPAKRN*
JGI25382J37095_101929361	3300002562	Grasslands Soil	EFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKAEKWVPAKR*
JGI25382J37095_102084952	3300002562	Grasslands Soil	TQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR*
JGI25382J37095_102202962	3300002562	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR*
JGI25382J43887_100444083	3300002908	Grasslands Soil	SGQMFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
JGI25382J43887_101039481	3300002908	Grasslands Soil	IDKGLDLPASSPADQMFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR*
JGI25382J43887_101214621	3300002908	Grasslands Soil	LPASSPAGQMFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKAEKWVPAKR*
JGI25382J43887_102211362	3300002908	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGGSFIMDTVTEKXPRVEASDPNQHIIWDWKAEKWIPAKRN*
JGI25382J43887_104315932	3300002908	Grasslands Soil	SGQMFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
JGI25386J43895_101863752	3300002912	Grasslands Soil	CTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
JGI25389J43894_10245681	3300002916	Grasslands Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHVIWDWKAEKWIPAKRN*
Ga0066672_102078472	3300005167	Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRD*
Ga0066672_106834412	3300005167	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0066680_100039884	3300005174	Soil	LTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKVEKWIPAKRN*
Ga0066680_101087172	3300005174	Soil	MFTCTKCDKREFQITQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWIPAKRN*
Ga0066679_100000274	3300005176	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRD*
Ga0066688_100165803	3300005178	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWIPAKRN*
Ga0066685_101008551	3300005180	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWVPAKRN*
Ga0066685_103958212	3300005180	Soil	MFTCIKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPVKRN*
Ga0066685_110260961	3300005180	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKRD*
Ga0066678_100080454	3300005181	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWK
Ga0066675_108004632	3300005187	Soil	MRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPANRN*
Ga0066686_103438722	3300005446	Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPVKRN*
Ga0066682_100019822	3300005450	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPANRN*
Ga0070699_1002949233	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGWSFIMDTVTEKRPRVEASDPNQHIIWDW
Ga0070697_1005022851	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MFTCNKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0070697_1020608401	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTITEKRPRVEASDPNEHIIWDWKAEKWIPAKR*
Ga0066697_100306393	3300005540	Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWVPAKRN*
Ga0066697_108322031	3300005540	Soil	TQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKRD*
Ga0066661_100148052	3300005554	Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWIPAKRN*
Ga0066692_100180993	3300005555	Soil	LTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR*
Ga0066692_105078562	3300005555	Soil	MDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0066707_105639162	3300005556	Soil	KREFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPANRN*
Ga0066704_107348701	3300005557	Soil	CGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR*
Ga0066704_109978062	3300005557	Soil	GQMFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0066698_102066222	3300005558	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPVKRN*
Ga0066700_103216862	3300005559	Soil	EFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0066703_102215532	3300005568	Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0066658_100011276	3300006794	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRS*
Ga0066660_100179431	3300006800	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTLTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0099791_100041715	3300007255	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0099793_104844051	3300007258	Vadose Zone Soil	LTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0099794_100187602	3300007265	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIIDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0099794_100227652	3300007265	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWVPAKR*
Ga0099794_102242151	3300007265	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNEHIIWDWKVEKWVPAKRN*
Ga0066710_1019576962	3300009012	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKA
Ga0066710_1033056891	3300009012	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTLTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0099829_107742251	3300009038	Vadose Zone Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWK
Ga0099829_108247612	3300009038	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGWSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0099830_111133851	3300009088	Vadose Zone Soil	KKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0099830_117006281	3300009088	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0099828_102901762	3300009089	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKTEKWVPAKRN*
Ga0099827_102363171	3300009090	Vadose Zone Soil	SKGKLIRDWTCQRYRFGQMFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0066709_1042499261	3300009137	Grasslands Soil	MFTCTNCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHVIWDWKAEKWIPAKRN*
Ga0134070_100499173	3300010301	Grasslands Soil	GASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0134082_102579431	3300010303	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDW
Ga0134086_103711372	3300010323	Grasslands Soil	PSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0134063_102458572	3300010335	Grasslands Soil	MFTCTKCDKREFQLTQLSEMGLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0137391_103858322	3300011270	Vadose Zone Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKTEKWVPAKRN*
Ga0137389_107609962	3300012096	Vadose Zone Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKRS*
Ga0137383_100821402	3300012199	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWIPAKRN*
Ga0137399_100659792	3300012203	Vadose Zone Soil	MKGQIDKGLDLPFIASGQMFTCTKCDKREFQLTQLSEMRLLAECSSCGSSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0137399_106164262	3300012203	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNEHIIWDWRVEKWIPAKRN*
Ga0137399_106660822	3300012203	Vadose Zone Soil	TQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0137380_100105636	3300012206	Vadose Zone Soil	LFTFSGLERQIDKGLDLPASSQMFTCTRCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHVIWDWKAEKWVPAKR*
Ga0137380_100580703	3300012206	Vadose Zone Soil	MFTCTKCEKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0137380_100632311	3300012206	Vadose Zone Soil	GTEPTTVVASGQMFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0137380_101652091	3300012206	Vadose Zone Soil	GTEPTTVVASGQMFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0137380_101772531	3300012206	Vadose Zone Soil	VAGGQMFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0137379_102397183	3300012209	Vadose Zone Soil	VASGQMFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0137387_102527552	3300012349	Vadose Zone Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWI
Ga0137387_109237691	3300012349	Vadose Zone Soil	GQMFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0137372_102854572	3300012350	Vadose Zone Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQRIIWDWKAEKWIPANRN*
Ga0137386_100614751	3300012351	Vadose Zone Soil	EQKELQLTQLSEMRLLGECPYCGGSFIMDTVKEKRHRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0137386_111374211	3300012351	Vadose Zone Soil	SCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR*
Ga0137367_100456472	3300012353	Vadose Zone Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQRIIWDWKAEKWIPAKRN*
Ga0137368_100626352	3300012358	Vadose Zone Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQRIIWDWKAEKWIPAKRD*
Ga0137361_100214492	3300012362	Vadose Zone Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKAEKWIPVKRN*
Ga0137390_104749072	3300012363	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR*
Ga0137390_111670442	3300012363	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIVWDWKAEKWIPAKRN*
Ga0134032_10940592	3300012376	Grasslands Soil	DKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPANRN*
Ga0134047_11300711	3300012380	Grasslands Soil	QMFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWVPAKRN*
Ga0134056_11346581	3300012397	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHVIWDWKAEKWIPAKRN*
Ga0137396_101787753	3300012918	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGTSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN*
Ga0137396_110381681	3300012918	Vadose Zone Soil	RARSDADGLMFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTITEKRPRVEASDPNEHIIWDWKAEKWIPAKR*
Ga0134076_104635271	3300012976	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHILWDWKAEKWIPAKRN*
Ga0134069_13129871	3300017654	Grasslands Soil	TQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0134112_100225863	3300017656	Grasslands Soil	CDKREFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0134083_104565801	3300017659	Grasslands Soil	QLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0066655_100106503	3300018431	Grasslands Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWVPAKRN
Ga0066667_115995412	3300018433	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0066662_100189132	3300018468	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEMRPRVEASDPNQHIVWDWKVEKWIPAKRN
Ga0066662_100195974	3300018468	Grasslands Soil	LTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR
Ga0066662_117231421	3300018468	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWIPAKRN
Ga0215015_102250811	3300021046	Soil	TELGLSLAGCKMFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0210404_101406132	3300021088	Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGWSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWTPAKR
Ga0209324_101072202	3300025174	Soil	MRLLAECTGCGASFIADAVNEKRPRVEASDPNQHIVWDWKSEQWVPAKRE
Ga0209520_100547473	3300025319	Soil	MRLLAECTGCGAAFIADAVNEKRPRVEASDPNQHIVWDWKSEQWVPAKRE
Ga0209235_100021421	3300026296	Grasslands Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0209235_10191954	3300026296	Grasslands Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0209235_10432403	3300026296	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR
Ga0209235_10664432	3300026296	Grasslands Soil	MFTCTKCDKREFQITQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0209235_10793181	3300026296	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0209237_10190123	3300026297	Grasslands Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR
Ga0209237_10378273	3300026297	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR
Ga0209237_10959892	3300026297	Grasslands Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKVEKWIPAKRN
Ga0209236_10400204	3300026298	Grasslands Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHVIWDWKAEKWIPAKRN
Ga0209236_10485203	3300026298	Grasslands Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0209238_10019153	3300026301	Grasslands Soil	MFTCTNCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHVIWDWKAEKWIPAKRN
Ga0209238_12424902	3300026301	Grasslands Soil	TSVVTSGQMFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0209154_10261183	3300026317	Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRD
Ga0209470_10025066	3300026324	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWVPAKRN
Ga0209152_100003429	3300026325	Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRS
Ga0209802_12730472	3300026328	Soil	GYQMFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKVEKWIPAKRN
Ga0209803_10118843	3300026332	Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKVEKWIPAKRN
Ga0209158_11650512	3300026333	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKAEKWIPVKRN
Ga0209158_12159281	3300026333	Soil	SCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0209377_10350904	3300026334	Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIVWDWKVEKWIPAKRN
Ga0209378_13108481	3300026528	Soil	KREFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPANR
Ga0209160_100554410	3300026532	Soil	LLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR
Ga0209058_11595771	3300026536	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPVKRN
Ga0209157_10425722	3300026537	Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPVKRN
Ga0209157_10673082	3300026537	Soil	MFTCTKCDKKEFQLTQLSEMRMLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0209376_11417771	3300026540	Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKRD
Ga0209474_100243121	3300026550	Soil	MDTVTEKRPRVEASDPNQHIIWDWKAEKWVPANRN
Ga0209388_10008223	3300027655	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR
Ga0209588_10163913	3300027671	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGGSFIIDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR
Ga0209689_10828033	3300027748	Soil	LSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRD
Ga0209701_100695092	3300027862	Vadose Zone Soil	MFTCTTCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0209283_103522361	3300027875	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKR
Ga0209283_107875301	3300027875	Vadose Zone Soil	MFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWV
Ga0209590_105110232	3300027882	Vadose Zone Soil	MRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWVPAKR
Ga0209590_110377361	3300027882	Vadose Zone Soil	KEFQLTQLSEMRLLAECPSCGGSFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN
Ga0137415_101429972	3300028536	Vadose Zone Soil	MFTCTKCDKREFQLTQLSEMRLLAECPSCGASFIMDTITEKRPRVEASDPNEHIIWDWKAEKWIPAKR
Ga0257175_10813662	3300028673	Soil	QRRRFGQMFTCTKCDKKEFQLTQLSEMRLLAECPSCGASFIMDTVTEKRPRVEASDPNQHIIWDWKAEKWIPAKRN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048885

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences