Metagenome / Metatranscriptome Family F048810

Overview

Basic Information

• Family ID: F048810
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 147
• Average Sequence Length: 41 residues
• Representative Sequence: MSTLLRTIEFLSLSLWLGSDVFLSFVVAPGAFRILGSRDQ
• Number of Associated Samples: 122
• Number of Associated Scaffolds: 147

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 60.27 %
• % of genes near scaffold ends (potentially truncated): 96.60 %
• % of genes from short scaffolds (< 2000 bps): 84.35 %
• Associated GOLD sequencing projects: 115
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (74.830 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.809 % of family members)
• Environment Ontology (ENVO): Unclassified (26.531 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (58.503 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 55.88%
  β-sheet: 0.00%
  Coil/Unstructured: 44.12%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF07726	AAA_3	36.05
PF01850	PIN	9.52
PF01882	DUF58	3.40
PF03693	ParD_antitoxin	3.40
PF05168	HEPN	2.72
PF00072	Response_reg	1.36
PF05016	ParE_toxin	1.36
PF14255	Cys_rich_CPXG	1.36
PF12697	Abhydrolase_6	1.36
PF10576	EndIII_4Fe-2S	1.36
PF00561	Abhydrolase_1	0.68
PF04014	MazE_antitoxin	0.68
PF07730	HisKA_3	0.68
PF07479	NAD_Gly3P_dh_C	0.68
PF11992	TgpA_N	0.68
PF12146	Hydrolase_4	0.68
PF01694	Rhomboid	0.68
PF13559	DUF4129	0.68
PF13545	HTH_Crp_2	0.68
PF04055	Radical_SAM	0.68
PF00730	HhH-GPD	0.68
PF11304	DUF3106	0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	3.40
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	3.40
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	2.72
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	2.72
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.68
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.68
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.68
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.68
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.68
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.68
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.68
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.68
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.68
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.68

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.83 %
Unclassified	root	N/A	25.17 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.83 %
Unclassified	root	N/A	25.17 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.83 %
Unclassified	root	N/A	25.17 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	46.26 %
Unclassified	root	N/A	25.17 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.68 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.44 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.68 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.40 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.68 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.68 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.40 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.68 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.68 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.88 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.36 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.68 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.68 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.68 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.88 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.36 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.68 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.68 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.68 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001084|JGI12648J13191_1010399	All Organisms → cellular organisms → Bacteria	903
3300001159|JGI12650J13346_1004903	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	629
3300002909|JGI25388J43891_1000773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6411
3300002917|JGI25616J43925_10163446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882
3300002917|JGI25616J43925_10184092	All Organisms → cellular organisms → Bacteria	817
3300004631|Ga0058899_12205185	All Organisms → cellular organisms → Bacteria	1016
3300005332|Ga0066388_102663919	All Organisms → cellular organisms → Bacteria → Acidobacteria	912
3300005553|Ga0066695_10043788	All Organisms → cellular organisms → Bacteria	2641
3300005554|Ga0066661_10245078	All Organisms → cellular organisms → Bacteria	1109
3300005602|Ga0070762_10813567	All Organisms → cellular organisms → Bacteria	633
3300006034|Ga0066656_10443997	All Organisms → cellular organisms → Bacteria	844
3300006041|Ga0075023_100548767	All Organisms → cellular organisms → Bacteria	529
3300006871|Ga0075434_100946978	All Organisms → cellular organisms → Bacteria	875
3300007265|Ga0099794_10351689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767
3300009038|Ga0099829_10143901	All Organisms → cellular organisms → Bacteria	1897
3300009088|Ga0099830_10491930	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000
3300009088|Ga0099830_11557693	All Organisms → cellular organisms → Bacteria	550
3300009521|Ga0116222_1065598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1571
3300009552|Ga0116138_1033611	All Organisms → cellular organisms → Bacteria → Acidobacteria	1523
3300009672|Ga0116215_1475180	Not Available	540
3300010046|Ga0126384_10663471	All Organisms → cellular organisms → Bacteria → Acidobacteria	920
3300010048|Ga0126373_11241420	All Organisms → cellular organisms → Bacteria → Acidobacteria	811
3300010048|Ga0126373_13300128	All Organisms → cellular organisms → Bacteria → Acidobacteria	502
3300010301|Ga0134070_10404712	Not Available	538
3300010333|Ga0134080_10626179	Not Available	526
3300010337|Ga0134062_10096473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264
3300010366|Ga0126379_11616424	Not Available	753
3300011270|Ga0137391_10647252	All Organisms → cellular organisms → Bacteria → Acidobacteria	882
3300012096|Ga0137389_10071295	All Organisms → cellular organisms → Bacteria → Acidobacteria	2688
3300012189|Ga0137388_10995314	All Organisms → cellular organisms → Bacteria → Acidobacteria	774
3300012189|Ga0137388_12038891	All Organisms → cellular organisms → Bacteria → Acidobacteria	501
3300012203|Ga0137399_10963079	All Organisms → cellular organisms → Bacteria → Acidobacteria	719
3300012205|Ga0137362_11515698	All Organisms → cellular organisms → Bacteria → Acidobacteria	557
3300012349|Ga0137387_10007417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6249
3300012349|Ga0137387_10983378	Not Available	606
3300012351|Ga0137386_10992095	All Organisms → cellular organisms → Bacteria → Acidobacteria	598
3300012361|Ga0137360_10680187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883
3300012362|Ga0137361_11365966	All Organisms → cellular organisms → Bacteria	632
3300012362|Ga0137361_11509545	All Organisms → cellular organisms → Bacteria → Acidobacteria	594
3300012685|Ga0137397_10246174	All Organisms → cellular organisms → Bacteria	1332
3300012685|Ga0137397_11351741	All Organisms → cellular organisms → Bacteria	503
3300012923|Ga0137359_10965502	All Organisms → cellular organisms → Bacteria → Acidobacteria	732
3300012925|Ga0137419_10474259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990
3300012925|Ga0137419_10659121	All Organisms → cellular organisms → Bacteria → Acidobacteria	846
3300012927|Ga0137416_10599069	Not Available	960
3300012927|Ga0137416_11766353	All Organisms → cellular organisms → Bacteria → Acidobacteria	565
3300012930|Ga0137407_11005638	All Organisms → cellular organisms → Bacteria → Acidobacteria	790
3300012944|Ga0137410_10168881	All Organisms → cellular organisms → Bacteria	1678
3300012948|Ga0126375_11945441	All Organisms → cellular organisms → Bacteria	518
3300012986|Ga0164304_10719728	Not Available	761
3300014168|Ga0181534_10237167	Not Available	964
3300015054|Ga0137420_1393188	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233
3300015241|Ga0137418_10195811	All Organisms → cellular organisms → Bacteria	1750
3300015241|Ga0137418_10640081	All Organisms → cellular organisms → Bacteria → Acidobacteria	828
3300015264|Ga0137403_10286093	Not Available	1547
3300015356|Ga0134073_10353842	All Organisms → cellular organisms → Bacteria → Acidobacteria	540
3300015358|Ga0134089_10347462	Not Available	624
3300016357|Ga0182032_10052778	All Organisms → cellular organisms → Bacteria → Acidobacteria	2647
3300016357|Ga0182032_10134739	Not Available	1804
3300017940|Ga0187853_10188894	Not Available	970
3300017955|Ga0187817_10452678	Not Available	819
3300017970|Ga0187783_10038200	All Organisms → cellular organisms → Bacteria	3556
3300018019|Ga0187874_10054439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1844
3300018085|Ga0187772_10980309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	617
3300018086|Ga0187769_11420227	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	525
3300019268|Ga0181514_1165460	All Organisms → cellular organisms → Bacteria → Acidobacteria	668
3300020021|Ga0193726_1181443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898
3300020140|Ga0179590_1058952	All Organisms → cellular organisms → Bacteria	999
3300020579|Ga0210407_10215582	Not Available	1493
3300020580|Ga0210403_10429680	All Organisms → cellular organisms → Bacteria	1077
3300020580|Ga0210403_10811097	All Organisms → cellular organisms → Bacteria → Acidobacteria	743
3300020582|Ga0210395_10069787	All Organisms → cellular organisms → Bacteria	2583
3300020582|Ga0210395_10922900	All Organisms → cellular organisms → Bacteria	648
3300020583|Ga0210401_10742093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842
3300021088|Ga0210404_10365135	Not Available	803
3300021168|Ga0210406_10447630	All Organisms → cellular organisms → Bacteria	1028
3300021170|Ga0210400_10022296	All Organisms → cellular organisms → Bacteria → Acidobacteria	4934
3300021170|Ga0210400_10089850	All Organisms → cellular organisms → Bacteria	2422
3300021180|Ga0210396_10992827	All Organisms → cellular organisms → Bacteria	711
3300021180|Ga0210396_11069980	Not Available	680
3300021180|Ga0210396_11085504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674
3300021404|Ga0210389_10000819	All Organisms → cellular organisms → Bacteria → Acidobacteria	26281
3300021404|Ga0210389_10343602	All Organisms → cellular organisms → Bacteria	1171
3300021406|Ga0210386_11773661	All Organisms → cellular organisms → Bacteria	508
3300021420|Ga0210394_10032022	All Organisms → cellular organisms → Bacteria → Acidobacteria	4717
3300021477|Ga0210398_10029506	All Organisms → cellular organisms → Bacteria	4599
3300021478|Ga0210402_11857135	All Organisms → cellular organisms → Bacteria → Acidobacteria	528
3300021479|Ga0210410_10228794	Not Available	1666
3300021479|Ga0210410_10599947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978
3300021559|Ga0210409_10861831	All Organisms → cellular organisms → Bacteria	779
3300021560|Ga0126371_10941521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007
3300022510|Ga0242652_1031412	Not Available	613
3300022533|Ga0242662_10210698	All Organisms → cellular organisms → Bacteria → Acidobacteria	615
3300022717|Ga0242661_1166374	All Organisms → cellular organisms → Bacteria → Acidobacteria	503
3300022724|Ga0242665_10370813	Not Available	517
3300022873|Ga0224550_1039358	All Organisms → cellular organisms → Bacteria → Acidobacteria	675
3300024275|Ga0247674_1023612	Not Available	715
3300024283|Ga0247670_1023229	All Organisms → cellular organisms → Bacteria	1111
3300024330|Ga0137417_1040669	All Organisms → cellular organisms → Bacteria → Acidobacteria	2094
3300025472|Ga0208692_1107416	All Organisms → cellular organisms → Bacteria → Acidobacteria	541
3300025916|Ga0207663_10018890	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3872
3300025918|Ga0207662_10399431	All Organisms → cellular organisms → Bacteria	932
3300026078|Ga0207702_11740554	All Organisms → cellular organisms → Bacteria → Acidobacteria	616
3300026310|Ga0209239_1039175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2195
3300026330|Ga0209473_1209187	Not Available	731
3300026334|Ga0209377_1055932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1744
3300026469|Ga0257169_1066238	All Organisms → cellular organisms → Bacteria → Acidobacteria	581
3300026555|Ga0179593_1186550	All Organisms → cellular organisms → Bacteria → Acidobacteria	2699
3300026862|Ga0207724_1018999	All Organisms → cellular organisms → Bacteria → Acidobacteria	599
3300026909|Ga0207858_1009951	Not Available	944
3300027548|Ga0209523_1130340	Not Available	518
3300027565|Ga0209219_1060735	All Organisms → cellular organisms → Bacteria	942
3300027616|Ga0209106_1154734	Not Available	510
3300027662|Ga0208565_1082346	Not Available	986
3300027663|Ga0208990_1015909	All Organisms → cellular organisms → Bacteria	2487
3300027846|Ga0209180_10496279	Not Available	684
3300027846|Ga0209180_10674999	Not Available	564
3300027854|Ga0209517_10195413	Not Available	1253
3300027855|Ga0209693_10106033	Not Available	1391
3300027884|Ga0209275_10454623	All Organisms → cellular organisms → Bacteria → Acidobacteria	727
3300027884|Ga0209275_10543236	All Organisms → cellular organisms → Bacteria	665
3300027903|Ga0209488_10433777	All Organisms → cellular organisms → Bacteria	969
3300027908|Ga0209006_11260364	All Organisms → cellular organisms → Bacteria	574
3300028906|Ga0308309_10001422	All Organisms → cellular organisms → Bacteria → Acidobacteria	14302
3300028906|Ga0308309_11849042	All Organisms → cellular organisms → Bacteria → Acidobacteria	510
3300031128|Ga0170823_11137547	All Organisms → cellular organisms → Bacteria → Acidobacteria	937
3300031231|Ga0170824_109057254	Not Available	1577
3300031474|Ga0170818_101881725	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006
3300031545|Ga0318541_10183841	Not Available	1154
3300031708|Ga0310686_106888167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2105
3300031718|Ga0307474_11188560	Not Available	603
3300031744|Ga0306918_11123053	Not Available	608
3300031744|Ga0306918_11468923	All Organisms → cellular organisms → Bacteria → Acidobacteria	521
3300031754|Ga0307475_10501838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974
3300031754|Ga0307475_10777258	All Organisms → cellular organisms → Bacteria → Acidobacteria	761
3300031754|Ga0307475_10999637	Not Available	657
3300031833|Ga0310917_10066491	All Organisms → cellular organisms → Bacteria	2250
3300031879|Ga0306919_10537229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	902
3300031897|Ga0318520_10747744	Not Available	612
3300031910|Ga0306923_10846531	All Organisms → cellular organisms → Bacteria	1006
3300031942|Ga0310916_11286308	Not Available	602
3300031954|Ga0306926_10000678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	32302
3300032076|Ga0306924_10020981	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6937
3300032261|Ga0306920_100710936	All Organisms → cellular organisms → Bacteria	1480
3300032829|Ga0335070_11893204	All Organisms → cellular organisms → Bacteria	538
3300033977|Ga0314861_0344998	All Organisms → cellular organisms → Bacteria	662

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.64%
Host-Associated	Host-Associated	1.36%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.20%
Aquatic	Environmental → Aquatic	5.44%
Plants	Host-Associated → Plants	1.36%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.52%
Freshwater	Environmental → Aquatic → Freshwater	4.76%
Sediment	Environmental → Aquatic → Sediment	0.68%
Peat	Environmental → Terrestrial → Peat	0.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.19%
Loam	Environmental → Terrestrial → Soil → Loam	12.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.72%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%

Habitat

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.40%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.04%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.04%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental
3300001159	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2	Environmental
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental
3300026862	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31 (SPAdes)	Environmental
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10103991	3300001084	Forest Soil	MATFLRTVEFLALSLWLGSDVFLSFVVAPGAFRVLAG
JGI12650J13346_10049032	3300001159	Forest Soil	MTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGSRDAAGMMVGFALARLH
JGI25388J43891_10007736	3300002909	Grasslands Soil	MATFLRAIEFLGLSLWLGSDVFLSFVVAPGAFRILSSRDQAG
JGI25616J43925_101634463	3300002917	Grasslands Soil	MSTMLRTVEFLGLSLWLGSDVFLSFVVAPGAFSLLGSRDQA
JGI25616J43925_101840922	3300002917	Grasslands Soil	LVTTLFRTIEFLSLSLWLGADAFLSFVVAPGAFTILGNRDAAGM
Ga0058899_122051851	3300004631	Forest Soil	MTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDAAGMMV
Ga0066388_1026639191	3300005332	Tropical Forest Soil	MQTLPRTLEFLCLSLWLGADTFLSFVVAPGAFAIFGNRDAAGMMVG
Ga0066695_100437884	3300005553	Soil	LYSAPMASLLRTIEFLGLGLWLGSDVFLSFVVAPGAFRILA
Ga0066661_102450783	3300005554	Soil	MMNFLRTLEFLGLSLWLGSDVFLSFVVARGAFRILASR
Ga0070762_108135673	3300005602	Soil	MQTILRTIEVLTLSLWLGADVFLSFVVAPGAFAILG
Ga0066656_104439973	3300006034	Soil	MMNLLRTLEFLGLSVWVGSDAFLSLVMAPGAFRILA
Ga0075023_1005487673	3300006041	Watersheds	MSTALRTIEFLCLGVWLGGICLLSFVIAPGAFTILPTRDIAGTFVG
Ga0075434_1009469783	3300006871	Populus Rhizosphere	MTILRTLEYLALSIWVGSDVFLSFIVAPGAFSVIASRDQA
Ga0099794_103516891	3300007265	Vadose Zone Soil	MSTLLRTIEFLGLSLWLGSDVFLSFVVAPGAFRILASRDQ
Ga0099829_101439011	3300009038	Vadose Zone Soil	MSTVLRSIEFLCLGLWLGSDVFLSFVVAPGAFRVL
Ga0099830_104919301	3300009088	Vadose Zone Soil	MSTVLRSIEFLCLGLWLGSDVFLSFVVAPGAFRVLG
Ga0099830_115576931	3300009088	Vadose Zone Soil	MSTLLRTIEFLCLGLWLGSDVFLSFVVAPGAFRVLGSR
Ga0116222_10655983	3300009521	Peatlands Soil	MQALLRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDAAG
Ga0116138_10336111	3300009552	Peatland	MSIFLRTVEFLGLSLWLGADAFLSFVVAPGAFAILGNRDAAGMMVGFSLAR
Ga0116215_14751803	3300009672	Peatlands Soil	MSTALRTIEFLCLGVWLGGICLLSFVIAPGAFGILQSRDVAGEFVGYALGRLHLIG
Ga0126384_106634714	3300010046	Tropical Forest Soil	MISILRTFEFLALSVWLGSDVFLSFVVAPGAFHILPNRDQA
Ga0126373_107488443	3300010048	Tropical Forest Soil	MATLLRTIEFLGIALWLGSDIFVSLILAPGAFRLLASRDQAGAMVGFSL
Ga0126373_112414201	3300010048	Tropical Forest Soil	MNILRTLEFLALSIWLGSDAFLSFIVAPGAFLVMASRDQAGAMVGYSL
Ga0126373_133001281	3300010048	Tropical Forest Soil	MTTLFRTIEFLSLSLWLGGDAFLSFVVAPGAFAILGSRDAAGMMVGYALTRLHFA
Ga0134070_104047123	3300010301	Grasslands Soil	MSTLLRTIEFLGLSVWLGSDVFLSFVVAPGAFRILGS
Ga0134080_106261791	3300010333	Grasslands Soil	MSTLLRTIEFLSLSLWLGSDVFLSFVVAPGAFRILGSRDQ
Ga0134062_100964731	3300010337	Grasslands Soil	MSTFLRVIEFLGLSLWLGSDVFLSFVVAPGAFRILASRDQA
Ga0126379_116164243	3300010366	Tropical Forest Soil	MSTVLRALEFLGLSIWLGSDIFLSFIVAPGAFSVLASRDQAG
Ga0137391_106472523	3300011270	Vadose Zone Soil	MSTLLRTIEFLCLGLWLGSDVFLSFVVAPGAFRVLGGRD
Ga0137389_100712951	3300012096	Vadose Zone Soil	MSTFLRTIEFLCLGLWLGSDVFLSFVVAPGAFRVLG
Ga0137388_109953141	3300012189	Vadose Zone Soil	MSTLLRTVEFLGLSLWLGSDVFLSFVVAPGAFSILASRDQAG
Ga0137388_120388911	3300012189	Vadose Zone Soil	MSVFLRAIEFLGLSIWLGGDVFLSFVVAPGAFSVLASRDQAG
Ga0137399_109630792	3300012203	Vadose Zone Soil	MSIFLRAIEFLGLGIWLGSDIFLSFVVAPGAFSVLAS
Ga0137362_115156982	3300012205	Vadose Zone Soil	MAFMSGTIEFLCLGLWLGSDVFLSFVVAPWAFRVLGSR
Ga0137387_100074171	3300012349	Vadose Zone Soil	MLTVLRAFEFLGLSIWLGSDIFLSFVVAPGAFSVLASRDQ
Ga0137387_109833783	3300012349	Vadose Zone Soil	MSNIFRALEFLGLSVWLGSDIFLSFVVAPGAFRILASRDQAG
Ga0137386_109920951	3300012351	Vadose Zone Soil	MMSFLRTLEFLGLSLWLGSDVFLSFVVAPGAFWILTSRDQ
Ga0137360_106801871	3300012361	Vadose Zone Soil	MSTLLRTVEFLTLSLWLGSDVFLSFVVAPGAFRVL
Ga0137361_113659661	3300012362	Vadose Zone Soil	MSILLRTIEFLGLGYWLGSDGFLSFVVAPGAFSVL
Ga0137361_115095453	3300012362	Vadose Zone Soil	MSIVLRTLEFLSLSLWLGSDVFLSFVVAPGAFSVLASRDQ
Ga0137397_102461744	3300012685	Vadose Zone Soil	LVTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFTILGNRDAAGMMVGYSLARLH
Ga0137397_113517412	3300012685	Vadose Zone Soil	MSILLRTIEYLGLGYWLGSDGFLSFVVAPGAFSVLASR
Ga0137359_109655022	3300012923	Vadose Zone Soil	MSTFLRSIEFLCLGLWLGSDVFLSFVVAPGAFRVLGSRD
Ga0137419_104742591	3300012925	Vadose Zone Soil	MSTVLRTIEFLCLGLWVGSDVFLSFVVAPGAFRIL
Ga0137419_106591211	3300012925	Vadose Zone Soil	MSTLLRTVEFLCLGLWLGSDVFLSFVVAPGAFRILGS
Ga0137416_105990691	3300012927	Vadose Zone Soil	MSTVLRTIEFLCLGLWVGSDVFLSFVVAPGAFRILGSRGMLLELW
Ga0137416_117663532	3300012927	Vadose Zone Soil	MASLLRTIEFLGLSLWLGSDVFLSFVLAPGAFRILAS
Ga0137407_110056383	3300012930	Vadose Zone Soil	MTILLQTIEFLGLSLWLGSDVFLSFVVAPGAFRILASRDQAG
Ga0137410_101688811	3300012944	Vadose Zone Soil	MTILLQSIEFLGLSLWLGSDVFLSFVVAPGAFRIL
Ga0126375_119454413	3300012948	Tropical Forest Soil	MNNIFRALEFLGLSVWLGSDIFLSFVVAPGAFRVLAPNR
Ga0164304_107197281	3300012986	Soil	MSTLLRTIEFLGLSLWLGSDVFLSFVVAPGAFRIL
Ga0181534_102371673	3300014168	Bog	MQAFLRTIEFLSLGLWLGADAFLSFVVAPGAFTILNNRDSAG
Ga0137420_13931881	3300015054	Vadose Zone Soil	MSTLLRTIEFLGLSLWLGSDVFLSFVVAPGAFRILASR
Ga0137418_101958113	3300015241	Vadose Zone Soil	MQSLLRTIEFLGLSLWLGSDVFLSFVVAPGAFRILANRDQ
Ga0137418_106400811	3300015241	Vadose Zone Soil	MSTLLRTVEFLCLGLWLGSDVFLSFVVAPGAFRVLG
Ga0137403_102860934	3300015264	Vadose Zone Soil	MTHLFRSIEFLSLGLWLGADAFLSFVVAPGAFAILGNRDAAGMM
Ga0134073_103538423	3300015356	Grasslands Soil	MASLLRTIEFLGLSLWLGSDVFLSFVVAPGAFRILA
Ga0134089_103474621	3300015358	Grasslands Soil	MSTFLRTIEFLGLSVWLGSDVFLSFVVAPGAFRIL
Ga0182032_100527784	3300016357	Soil	MILRTFEFLCLSLWLGADVFLSFVVAPGAFGILGSRD
Ga0182032_101347393	3300016357	Soil	MSTLLRTIEFLSLGLWLAGIAFLSFVVTPGAFAILGAAMRQG
Ga0187853_101888943	3300017940	Peatland	MQTILRSIEFLCLSLWLGADAFLSFVVAPGAFAIL
Ga0187817_104526781	3300017955	Freshwater Sediment	MQTILRSVEFLCVSLWLGADALLSFVVAPGAFAILGSREAAG
Ga0187783_100382001	3300017970	Tropical Peatland	MSTVLRAIEFLTVGLWLGADVFLSFVVAPGAFSILGN
Ga0187874_100544391	3300018019	Peatland	MQTILRSIEFLCLSLWLGADAFLSFVVAQGAFAILGSRDTAG
Ga0187772_109803092	3300018085	Tropical Peatland	LFAGASEMSSVFRFVEFLSLSLWLGADAFLSFVVAPGAFAILGSR
Ga0187769_114202271	3300018086	Tropical Peatland	VTTILRTVEFLGLSLWLGSDVFLSFVVAPGAFSVLASRD
Ga0181514_11654601	3300019268	Peatland	MIFIARTFEFLCLSLWLGSDVFLSFVVAPGAFRILGN
Ga0193726_11814432	3300020021	Soil	MSNFLRTVEFLCVGLWLGSDAFLSFVVAPGAFSVLARRD
Ga0179590_10589521	3300020140	Vadose Zone Soil	VTTLFRTIEFLSLSLWLGADAFLSFVVAPGAFTILGNRD
Ga0210407_102155821	3300020579	Soil	MLRTVEFLCLGLWLGADVFLSFVVAPGAFRILGSR
Ga0210403_104296801	3300020580	Soil	MTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNR
Ga0210403_108110973	3300020580	Soil	MVSILRTIEFLGLSLWLGSDVFLSFVVAPGAFRILAS
Ga0210395_100697871	3300020582	Soil	MAGGESFVTTFFRTIEFLSLGLWLGADAFLSFVVAPGA
Ga0210395_109229001	3300020582	Soil	MQTLLRAIEFLSLSLWLGGDAFLSFVVAPGAFSILGNRDAAGMMVGYALGRL
Ga0210401_107420931	3300020583	Soil	VTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFTILGNRDAAGMMVG
Ga0210404_103651353	3300021088	Soil	MSTLLRTIEFLGLSLWLGSDVFLSFVMAPGAFRILA
Ga0210406_104476303	3300021168	Soil	VTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGN
Ga0210400_100222961	3300021170	Soil	MSSFLRTIEFLGLSLWLGSDVFLSFVVAPGAFRILASR
Ga0210400_100898506	3300021170	Soil	MTILLQAIEFLGLSLWLGSDVFLSFVMAPGAFRILASRDQAGT
Ga0210396_109928271	3300021180	Soil	VTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFTILG
Ga0210396_110699801	3300021180	Soil	MTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGDRDAAGMM
Ga0210396_110855041	3300021180	Soil	VTTLFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGSRDAAGMMVGFALGRLH
Ga0210389_1000081923	3300021404	Soil	MTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDAAGMMVGFALGRLHF
Ga0210389_103436024	3300021404	Soil	VTTFFRTIEFLSLGLWLGADAFLSFVVAPGAFAILGNRDAAAMMVGFA
Ga0210386_117736612	3300021406	Soil	VTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILG
Ga0210394_100320221	3300021420	Soil	MAGGESFVTTFFRTIEFLSLGLWLGADAFLSFVVAPGAFAMLGNRD
Ga0210398_100295061	3300021477	Soil	MQTFLRGIEFLSLGLWLGGDVFLSFVVAPGAFSILGNR
Ga0210402_118571351	3300021478	Soil	MSTVLRSIEFLGLGLWLGSDIFLSFVVAPGAFRILASRD
Ga0210410_102287941	3300021479	Soil	VTTFFRKIEFLSLSLWLGADAFLSFVVAPGAFTILGNRDAAGMMVGFALARLHFA
Ga0210410_105999473	3300021479	Soil	MSSLLRTIEFLGLSLWLGSDAFMSLILAPGAFRILASRDQA
Ga0210409_108618313	3300021559	Soil	VTTFFRTIEFLSLGLWLGADAFLSFVVAPGAFAILGNRDAAAMMVGFALG
Ga0126371_109415211	3300021560	Tropical Forest Soil	MTSILRTIEFLALGVWLGSDVFLSFVVAPGAFGLLQSRDAAGAMV
Ga0242652_10314121	3300022510	Soil	MTTFFRTIEFLSLSLWLGSVAFLSFVVAPGAFAILGNRDAAGMM
Ga0242662_102106981	3300022533	Soil	MTSILRTIEFLALSLWLGSDVFLSFVVAPGAFRVLAPNRDQ
Ga0242661_11663741	3300022717	Soil	MTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDAAGMMVSFALARLHF
Ga0242665_103708133	3300022724	Soil	MTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDA
Ga0224550_10393581	3300022873	Soil	MSIFLRTVEFLALSLWLGSDVFLSFVVAPGAFRVLAGRDQA
Ga0247674_10236123	3300024275	Soil	MSNIFRALEFLGLSVWLGSDIFLSFVVAPGAFRVLAPNR
Ga0247670_10232293	3300024283	Soil	MVTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDAAGMMVGYSLA
Ga0137417_10406691	3300024330	Vadose Zone Soil	MTTFLRTIEFLSLSLWLGADAFLSFVVAPGAFTILGNRDAAGMMV
Ga0208692_11074162	3300025472	Peatland	MSIFLRTVEFLGLSLWLGADAFLSFVVAPGAFAILGNRDAAGMMVGFS
Ga0207663_100188901	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MQTLLRAIEFLSLSLWLGGDVFLSFVVAPGAFSILGNRDAAG
Ga0207662_103994314	3300025918	Switchgrass Rhizosphere	MSTFLRTVEFLALSLWLGSDVFLSFVVAPGAFRILA
Ga0207702_117405542	3300026078	Corn Rhizosphere	MSTFLRTVEFLALSLWLGSDVFLSFVVAPGAFRILASR
Ga0209239_10391751	3300026310	Grasslands Soil	MATFLRAIEFLGLSLWLGSDVFLSFVVAPGAFRILSSR
Ga0209473_12091873	3300026330	Soil	MATFLRAIEFLGLSLWLGSDVFLSFVVAPGAFRIL
Ga0209377_10559323	3300026334	Soil	MLTVLRAFEFLGLSIWLGSDIFLSFVVAPGAFSVLASRD
Ga0257169_10662382	3300026469	Soil	MSIFLRAIEFLGLGIWLGSDIFLSFVVAPGAFSVLASRD
Ga0179593_11865505	3300026555	Vadose Zone Soil	MSNIFRALEFLGLSVWLGSDIFLSFVVAPGAFRVLAPNRDQPEQWWGLR
Ga0207724_10189992	3300026862	Tropical Forest Soil	MSTILRTVEFLCLSLWLGADVFLSFVVAPGAFGILGSRDAAGM
Ga0207858_10099513	3300026909	Tropical Forest Soil	MSTMLRTVEFLCLSLWLGADVFLSFVVAPGAFGILGSRDAAGMMVGYVLTR
Ga0209523_11303401	3300027548	Forest Soil	MTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGSRDVAGM
Ga0209219_10607351	3300027565	Forest Soil	MTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGSRDAAGMMVGFA
Ga0209106_11547341	3300027616	Forest Soil	MSTFLRTIEFLCLGLWLGSDVFLSFVVAPGAFRVLGSRD
Ga0208565_10823461	3300027662	Peatlands Soil	MQAFLRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDAA
Ga0208990_10159091	3300027663	Forest Soil	VTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFTILGNRDAAGMMVGYSLARLH
Ga0209180_104962793	3300027846	Vadose Zone Soil	MSNFLRTVEFLCLGLWLGADVFLSFVVAPGAFAVLGNRD
Ga0209180_106749993	3300027846	Vadose Zone Soil	LSTILRTIEFLCLSLWVGGIVFLSFVVAPGAFSILPGRDIA
Ga0209517_101954133	3300027854	Peatlands Soil	MQAFLRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDAAG
Ga0209693_101060334	3300027855	Soil	MALPAAPFTMTSILRTVEFLALSVWLGSDVFLSFVVAPGAFRVLAPNRDQ
Ga0209275_104546231	3300027884	Soil	MANVLRTVEFLALSLWLGSDVFLSFVLAPGAFRILASRDQA
Ga0209275_105432361	3300027884	Soil	MQTILRTIEVLTLSLWLGADVFLSFVVAPGAFAILGNRDAAGMMVGF
Ga0209488_104337771	3300027903	Vadose Zone Soil	MSTVLRTIEFLCLGLWVGSDVFLSFVVAPGAFRILG
Ga0209006_112603641	3300027908	Forest Soil	MQDLLRTIEFLGLSLWLGSDVFLSFVVAPGAFRILGS
Ga0308309_100014221	3300028906	Soil	MTIFSRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDAAGMMVGF
Ga0308309_118490421	3300028906	Soil	MANFLRTVEFLCLSLWLGSDVFLSFVVAPGAFRVLA
Ga0170823_111375473	3300031128	Forest Soil	MTNFLRTLEFLTLGLWLGSDVFLSFVVAPGAFHVLATRD
Ga0170824_1090572541	3300031231	Forest Soil	VTTFFRTIEFLSLSLWLGADAFLSFVVAPGAFAILGNRDAAGMV
Ga0170818_1018817253	3300031474	Forest Soil	MIVVLRTLEFLGLSIWLGSDVFLSFVVAPGAFSVLA
Ga0318541_101838413	3300031545	Soil	MSTLLRTIEFLSLGLWLAGIAFLSFVVTPGAFAILGAAMRRG
Ga0310686_1068881671	3300031708	Soil	MSTALRTIEFLCLGVWLGGICLLSFVIAPGAFGILQSR
Ga0307474_111885603	3300031718	Hardwood Forest Soil	MSTVFRAIEFLGLSIWLGSDVFLSFVVAPGAFSVLASRDQ
Ga0306918_111230533	3300031744	Soil	MSTILRTIEFLCLSLWLGADVFLSLVVAPGAFGILGSRDAAGMMVGYVLA
Ga0306918_114689233	3300031744	Soil	MSTILRAVEFLCLSLWLGADVFLSFVVAPGAFGILGSRDAAGMMVGYALARLHF
Ga0307475_105018383	3300031754	Hardwood Forest Soil	MSTLLRTVEFLCLSLWLGSDVFLSFVVAPGAFSILA
Ga0307475_107772582	3300031754	Hardwood Forest Soil	MSTILRTIEFLALGLWLGSDVFLSFVVAPGAFRILASR
Ga0307475_109996371	3300031754	Hardwood Forest Soil	MSTVLRTIEFLGLSLWLGSDVFLSFVVAPGAFSLLGS
Ga0310917_100664911	3300031833	Soil	IEFLSLGLWLAGIAFLSFVVAPGAFAILGAAMRRG
Ga0306919_105372291	3300031879	Soil	MQTLLRTVEFLALGLWLGGDAFLSLVVAPGAFTLLGNRDAAGMMVG
Ga0318520_107477441	3300031897	Soil	MSTLLRTIEFLSLGLWLAGIALLSFVVTPGAFAIQGAARR
Ga0306923_108465313	3300031910	Soil	MSTILRTIEFLCLSLWLGADVFLSLVVAPGAFGILGSRDAAGMMVGYVLARLHF
Ga0310916_112863081	3300031942	Soil	MHTFLRGVEFLSVSLWLGADAFLSFVVAPGAFLLLGNRDAAGMLVG
Ga0306926_100006784	3300031954	Soil	MSTLLRTIEFLSLGLWLAGIAFLSFVVAPGAFAILGAAMRRG
Ga0306924_100209811	3300032076	Soil	MSTILRAVEFLCLSLWLGADVFLSFVVAPGAFGILGSRDAAGMMV
Ga0306920_1007109362	3300032261	Soil	MSTFLRATEFLCLSLWLGSDAFLSFVVAPGAFRILSNRN
Ga0335070_118932041	3300032829	Soil	MQTTLRFIEFLSLSLWLGADAFLSFVVAPGAFAILG
Ga0314861_0344998_540_662	3300033977	Peatland	MNLTLRFIEFLSLSLWLGADAFLSFVVAPGAFSILGSRDAA