Metagenome Family F048687

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F048687
Family Type	Metagenome
Number of Sequences	147
Average Sequence Length	69 residues
Representative Sequence	MGENQRAFVRALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Number of Associated Samples	58
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.42 %
% of genes near scaffold ends (potentially truncated)	38.78 %
% of genes from short scaffolds (< 2000 bps)	76.87 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (55.782 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (59.864 % of family members)
Environment Ontology (ENVO)	Unclassified (93.197 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.87% β-sheet: 0.00% Coil/Unstructured: 52.13%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF00196	GerE	37.41
PF03401	TctC	6.12
PF00027	cNMP_binding	3.40
PF13467	RHH_4	2.72
PF13545	HTH_Crp_2	1.36
PF12833	HTH_18	0.68
PF03466	LysR_substrate	0.68
PF01471	PG_binding_1	0.68
PF13276	HTH_21	0.68
PF14559	TPR_19	0.68
PF03237	Terminase_6N	0.68
PF04392	ABC_sub_bind	0.68
PF12307	DUF3631	0.68
PF00582	Usp	0.68
PF12697	Abhydrolase_6	0.68
PF13340	DUF4096	0.68
PF00589	Phage_integrase	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	6.12
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.78 %
Unclassified	root	N/A	44.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.78 %
Unclassified	root	N/A	44.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.78 %
Unclassified	root	N/A	44.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.20 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.40 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.36 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_102143646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1077	Open in IMG/M
3300005764\|Ga0066903_108146371	Not Available	537	Open in IMG/M
3300016270\|Ga0182036_10082017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2138	Open in IMG/M
3300016270\|Ga0182036_11186657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300016270\|Ga0182036_11471760	Not Available	571	Open in IMG/M
3300016294\|Ga0182041_10198616	Not Available	1595	Open in IMG/M
3300016294\|Ga0182041_10324551	Not Available	1285	Open in IMG/M
3300016294\|Ga0182041_10352087	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300016294\|Ga0182041_12283289	Not Available	506	Open in IMG/M
3300016319\|Ga0182033_10261995	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300016319\|Ga0182033_10549848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	998	Open in IMG/M
3300016319\|Ga0182033_10576283	Not Available	975	Open in IMG/M
3300016319\|Ga0182033_11708971	Not Available	570	Open in IMG/M
3300016341\|Ga0182035_10030696	All Organisms → cellular organisms → Bacteria → Proteobacteria	3466	Open in IMG/M
3300016341\|Ga0182035_10458388	Not Available	1082	Open in IMG/M
3300016341\|Ga0182035_11089928	Not Available	710	Open in IMG/M
3300016341\|Ga0182035_11308025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300016341\|Ga0182035_11371961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300016357\|Ga0182032_11345947	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300016371\|Ga0182034_10025335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3619	Open in IMG/M
3300016371\|Ga0182034_11057652	Not Available	702	Open in IMG/M
3300016371\|Ga0182034_11092134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300016387\|Ga0182040_10087306	Not Available	2078	Open in IMG/M
3300016387\|Ga0182040_10462730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300016387\|Ga0182040_10780159	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300016387\|Ga0182040_11006988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300016387\|Ga0182040_11279128	Not Available	619	Open in IMG/M
3300016404\|Ga0182037_10226339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300016404\|Ga0182037_10547512	All Organisms → cellular organisms → Bacteria → Proteobacteria	976	Open in IMG/M
3300016404\|Ga0182037_11036957	Not Available	716	Open in IMG/M
3300016422\|Ga0182039_10115375	All Organisms → cellular organisms → Bacteria → Proteobacteria	2014	Open in IMG/M
3300016422\|Ga0182039_10145974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1825	Open in IMG/M
3300016422\|Ga0182039_10731086	Not Available	874	Open in IMG/M
3300016445\|Ga0182038_10245359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1437	Open in IMG/M
3300016445\|Ga0182038_10301485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1310	Open in IMG/M
3300016445\|Ga0182038_10881623	Not Available	788	Open in IMG/M
3300016445\|Ga0182038_10979824	Not Available	748	Open in IMG/M
3300016445\|Ga0182038_11435924	Not Available	619	Open in IMG/M
3300018058\|Ga0187766_10868789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300026896\|Ga0207730_1008401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300027063\|Ga0207762_1007878	All Organisms → cellular organisms → Bacteria → Proteobacteria	2016	Open in IMG/M
3300027330\|Ga0207777_1003597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3810	Open in IMG/M
3300027516\|Ga0207761_1095964	Not Available	578	Open in IMG/M
3300027680\|Ga0207826_1052490	Not Available	1128	Open in IMG/M
3300027680\|Ga0207826_1182931	Not Available	568	Open in IMG/M
3300031543\|Ga0318516_10545656	Not Available	664	Open in IMG/M
3300031545\|Ga0318541_10065494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1895	Open in IMG/M
3300031545\|Ga0318541_10107463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1504	Open in IMG/M
3300031545\|Ga0318541_10165888	Not Available	1216	Open in IMG/M
3300031545\|Ga0318541_10794870	Not Available	528	Open in IMG/M
3300031573\|Ga0310915_10001421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12383	Open in IMG/M
3300031573\|Ga0310915_10317826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1101	Open in IMG/M
3300031573\|Ga0310915_10357121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1036	Open in IMG/M
3300031681\|Ga0318572_10372835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300031682\|Ga0318560_10294256	Not Available	875	Open in IMG/M
3300031719\|Ga0306917_10008768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5697	Open in IMG/M
3300031719\|Ga0306917_10211868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1471	Open in IMG/M
3300031719\|Ga0306917_10912622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300031744\|Ga0306918_10053375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2696	Open in IMG/M
3300031744\|Ga0306918_10257003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1335	Open in IMG/M
3300031768\|Ga0318509_10824748	Not Available	513	Open in IMG/M
3300031770\|Ga0318521_10810099	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300031770\|Ga0318521_10979328	Not Available	518	Open in IMG/M
3300031771\|Ga0318546_11354735	Not Available	500	Open in IMG/M
3300031781\|Ga0318547_10099702	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300031781\|Ga0318547_10430284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300031796\|Ga0318576_10396957	Not Available	652	Open in IMG/M
3300031798\|Ga0318523_10453338	Not Available	636	Open in IMG/M
3300031819\|Ga0318568_10890001	Not Available	551	Open in IMG/M
3300031835\|Ga0318517_10194532	Not Available	913	Open in IMG/M
3300031879\|Ga0306919_10009354	Not Available	5448	Open in IMG/M
3300031879\|Ga0306919_10142785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1738	Open in IMG/M
3300031879\|Ga0306919_10838526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300031880\|Ga0318544_10053705	Not Available	1460	Open in IMG/M
3300031890\|Ga0306925_10022420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6330	Open in IMG/M
3300031890\|Ga0306925_10078876	All Organisms → cellular organisms → Bacteria → Proteobacteria	3477	Open in IMG/M
3300031890\|Ga0306925_10091943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3222	Open in IMG/M
3300031890\|Ga0306925_10250869	Not Available	1907	Open in IMG/M
3300031890\|Ga0306925_10415579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1440	Open in IMG/M
3300031890\|Ga0306925_10489324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1311	Open in IMG/M
3300031890\|Ga0306925_10654213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104	Open in IMG/M
3300031890\|Ga0306925_10730936	Not Available	1033	Open in IMG/M
3300031890\|Ga0306925_11488464	Not Available	663	Open in IMG/M
3300031897\|Ga0318520_10666174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300031910\|Ga0306923_10238333	All Organisms → cellular organisms → Bacteria	2081	Open in IMG/M
3300031910\|Ga0306923_10240952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2069	Open in IMG/M
3300031910\|Ga0306923_11555838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300031910\|Ga0306923_11855425	Not Available	617	Open in IMG/M
3300031910\|Ga0306923_12279260	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031912\|Ga0306921_10396717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1611	Open in IMG/M
3300031912\|Ga0306921_10475605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1454	Open in IMG/M
3300031912\|Ga0306921_11432471	Not Available	758	Open in IMG/M
3300031912\|Ga0306921_11635751	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031912\|Ga0306921_12147438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	590	Open in IMG/M
3300031941\|Ga0310912_11370918	Not Available	535	Open in IMG/M
3300031942\|Ga0310916_10309105	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300031942\|Ga0310916_10501529	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300031942\|Ga0310916_10813896	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300031942\|Ga0310916_11062288	Not Available	674	Open in IMG/M
3300031942\|Ga0310916_11511958	Not Available	547	Open in IMG/M
3300031942\|Ga0310916_11569276	Not Available	535	Open in IMG/M
3300031945\|Ga0310913_10028662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3529	Open in IMG/M
3300031946\|Ga0310910_10232681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1437	Open in IMG/M
3300031946\|Ga0310910_10750300	Not Available	770	Open in IMG/M
3300031947\|Ga0310909_10970385	Not Available	695	Open in IMG/M
3300031954\|Ga0306926_10105084	All Organisms → cellular organisms → Bacteria	3467	Open in IMG/M
3300031954\|Ga0306926_10174454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2666	Open in IMG/M
3300031954\|Ga0306926_10494805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1503	Open in IMG/M
3300031954\|Ga0306926_10622323	Not Available	1316	Open in IMG/M
3300031954\|Ga0306926_10720833	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300032001\|Ga0306922_10058156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4016	Open in IMG/M
3300032001\|Ga0306922_10706953	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300032001\|Ga0306922_10719366	Not Available	1049	Open in IMG/M
3300032001\|Ga0306922_11168841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300032025\|Ga0318507_10034360	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300032035\|Ga0310911_10647268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300032039\|Ga0318559_10232574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	851	Open in IMG/M
3300032060\|Ga0318505_10556134	Not Available	540	Open in IMG/M
3300032064\|Ga0318510_10482345	Not Available	535	Open in IMG/M
3300032076\|Ga0306924_10020557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7007	Open in IMG/M
3300032076\|Ga0306924_10081330	All Organisms → cellular organisms → Bacteria	3633	Open in IMG/M
3300032076\|Ga0306924_10272723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1943	Open in IMG/M
3300032076\|Ga0306924_11721293	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300032076\|Ga0306924_12291193	Not Available	548	Open in IMG/M
3300032261\|Ga0306920_100106413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4154	Open in IMG/M
3300032261\|Ga0306920_100301623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2386	Open in IMG/M
3300032261\|Ga0306920_100306279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2366	Open in IMG/M
3300032261\|Ga0306920_100470376	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300032261\|Ga0306920_101485847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	968	Open in IMG/M
3300032261\|Ga0306920_101502461	Not Available	962	Open in IMG/M
3300032261\|Ga0306920_103008094	Not Available	636	Open in IMG/M
3300032261\|Ga0306920_103105541	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300032261\|Ga0306920_103584146	Not Available	572	Open in IMG/M
3300033289\|Ga0310914_10362481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1311	Open in IMG/M
3300033289\|Ga0310914_10821100	Not Available	828	Open in IMG/M
3300033289\|Ga0310914_11225831	Not Available	652	Open in IMG/M
3300033289\|Ga0310914_11296200	Not Available	631	Open in IMG/M
3300033290\|Ga0318519_10888433	Not Available	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.20%
Loam	Environmental → Terrestrial → Soil → Loam	6.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	93.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.12%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	59.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.12%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066903_1021436463	3300005764	Tropical Forest Soil	RALHESTAIADLIREAIADAPPKLVMLALCDLLQEHLTRSVMVKADREQTPAPKVLS*
Ga0066903_1081463712	3300005764	Tropical Forest Soil	RALHESTAIADLIREAIADAPPKLVMLALCDLLQEHLTRLVMVEADREQTPAPKVLS*
Ga0182036_100820175	3300016270	Soil	MTAGSDQRDFERALRESTVIADRIREVIADAPPKLVMLALTDLLQEHLTYLVMVEQDREQTPLPKVLS
Ga0182036_111866572	3300016270	Soil	MTDGADQRDFERALHESTVIADRIREAIAGAPPKLVMLALSDLLQENLTRLVMVEPDIEQAPLPNLVS
Ga0182036_114717601	3300016270	Soil	RMTDGSDDDGAARPAFERALHEFTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVIAEPDTERTPLPKALS
Ga0182041_101986161	3300016294	Soil	LHESTSIADRIREAIAGAPPKLVMLALSDLLQEHLTRLVTVESDKEQTLLSKMLFSN
Ga0182041_103245513	3300016294	Soil	MSDNQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQTPGSSQG
Ga0182041_103520871	3300016294	Soil	MTAGSDQRDFERALRESTVIADRIREVIADAPPKLVMLALTDLLQEHLTHLVMVEPGREQTPLPKVLS
Ga0182041_122832891	3300016294	Soil	MTDGSDGGTAQPAFVRALHESTAIADRIREAIAGAPPKLVMLALSDLLEHLTHLVMVESDREQTPFPRVLS
Ga0182033_102619953	3300016319	Soil	MTHGSDDSPARGCSLAMSENQRAVERALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMVEPDRKQTPLPRVVS
Ga0182033_105498481	3300016319	Soil	MCENQRAFERALHESTVIADRIREAIAGAPPKLVMLALSDLLQEHLTRLVTVESDKEQTLLSK
Ga0182033_105762832	3300016319	Soil	MSCAKRAGGRMTDGTAQRAFVRALHESTSIADRIREAIAGAPPKLVMLALSDLLQEHLTHSVMVESDREQMDTEQRLPKVLS
Ga0182033_117089711	3300016319	Soil	MSESQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMVEPDRKQTPPPRVVS
Ga0182035_100306965	3300016341	Soil	MTDGSDGGTAQPAFVRALHESTAIADRIREAIAGAPPKLVMLALSDLLEHLTHLVMVESDRDQTSFPRVLS
Ga0182035_104583882	3300016341	Soil	MTDGTAQRAFVRALHESTSIADRIREAIAGAPPKLVMLALSDLLQEHLTRLVTVESDKEQTLLSKMLFSN
Ga0182035_110899281	3300016341	Soil	RAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQTPGSSQG
Ga0182035_113080252	3300016341	Soil	MTAGSDQRDFERALHESTVIADRIREAIADAPPKLVMLALTDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0182035_113719612	3300016341	Soil	MTDGSDETARRVFERALHESTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVMAEPDTEQTPLPKALS
Ga0182032_113459471	3300016357	Soil	MADDLYNGSARQAFVRALHDSTTVADRIREAIADAPPKLVMLALSDLLQEQLTHLVMVEPDRETADGA
Ga0182034_100253354	3300016371	Soil	LTVQMIARSLTMGENQRAFVRALHESTAIADRIREVIADAPPKLVILALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Ga0182034_110576521	3300016371	Soil	MIARLGIAAWAMSANQRAFERALHESTDIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMVEPDRKQTPLPRVVS
Ga0182034_110921342	3300016371	Soil	MILLLGTKRGGAMGESQRAFEQALHESTAIADRIREVIADAPPKPVMLALTDLLQEHLTHLVMVEPDREQ
Ga0182034_115253561	3300016371	Soil	MTGDLDDGTACRAFERALHESTVIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMAEP
Ga0182040_100873063	3300016387	Soil	LSAGVRMTDGSDETAHRVFERALHESTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVIAEPDTERTPLPKALS
Ga0182040_104627301	3300016387	Soil	MGENQRAFVRALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKV
Ga0182040_107801591	3300016387	Soil	VLGRYLSGRAWPMSDNQRAFEQALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLARLVMVEPDRKQSPLPKVLS
Ga0182040_110069882	3300016387	Soil	MGESQRAFEQALHESTAIADRIREVIADAPPKPVMLPLTDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0182040_112791281	3300016387	Soil	MSENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLTSLVMVEPDEPDRKQTPLPKVL
Ga0182037_102263391	3300016404	Soil	DDGTACRAVERALHEPTVFADRIREAIADPPPTRVMLALSDLLQEHLTRLVMAEPDTEQTLLLKVLS
Ga0182037_105475122	3300016404	Soil	MNESQRAFERALHESTAIADLIREAIADAPPKLVILALCDLLQEHLTRLVMVEADREQTPAPKVLS
Ga0182037_110369571	3300016404	Soil	MSENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLTHLVLVEPDKEQTLLSKMPFSN
Ga0182039_101153752	3300016422	Soil	VVRALHESTAIADRIREAIAHAPPKLVMLALSDLLQEHLTRLVMVKPNREQTPLPKVLS
Ga0182039_101459743	3300016422	Soil	MGENQRAFVRALHESTAIADRIRGVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Ga0182039_107310861	3300016422	Soil	HRGESQLSDDLDDSTARRAFVRALHESTVIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMVEPDIEQAPLPNLVS
Ga0182038_102453591	3300016445	Soil	MTDGSDETARRVFERALHESTAIADRIRAAIADAPPKLVMLALTDLLQEHLTHLVMVEPD
Ga0182038_103014851	3300016445	Soil	MIDSSDDSTAWDCSLTMGENQRAFVRALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTP
Ga0182038_108816231	3300016445	Soil	LMNENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLAMVEPDREQAPLPKMV
Ga0182038_109798242	3300016445	Soil	MSENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQTPGSSQG
Ga0182038_114359242	3300016445	Soil	GTAQRAFVRALHESTSIADRIREAIAGAPPKLVMLALSDLLQEHLTHSVMVESDREQMDTEQTLPKVLS
Ga0187766_108687891	3300018058	Tropical Peatland	MRVARMTDGLDQRDFERALRESTVIADRIREAITDAPPKLVMLALSDLLQEHLTRLVMVEPDREQASLSPLSERLPKVLS
Ga0207730_10084012	3300026896	Tropical Forest Soil	MTDGSDQRDFQRALRESTVIADRIREAIADAPPKLVMLALSDLLQEYLTNLVKVEPDREQTPLPKVLS
Ga0207762_10078783	3300027063	Tropical Forest Soil	MGSIDFHWGRRMPDGTDQRQFERALHESTVIADRIREVIADAPTKLVMLALSDLLQEHLTRLVMVEPDREQASLSPLSERLPKVLS
Ga0207777_10035975	3300027330	Tropical Forest Soil	MTCDSDDGTARRLTSENQRTFERALHESTAIADRIREAIDDAPPKLVMLALSDLLQEHLTHLVMVEPDREQTPLS
Ga0207761_10959641	3300027516	Tropical Forest Soil	MRGQMTDDSDQRNFVRALHESTAIADRIREAIADAPTKLVMLALSDLLQEHLTRLVMVEPDREQTPLSRAQTDGAHSLSALRCRQAH
Ga0207826_10524901	3300027680	Tropical Forest Soil	MSCAKREGRMTDGSDGDTAQPAFVRALHESTTIADRIREAIAGAPPKLVMLALSDLLQEHLTHSVMVESDRKQTSFPRVLS
Ga0207826_11829311	3300027680	Tropical Forest Soil	ERALLESTAIADRIREAIADAPPKLVMLALSDLLQEHLTHSVMAEPDTEQTSLPNLVS
Ga0207862_11204802	3300027703	Tropical Forest Soil	MRGTRMIGSDNSTAWDCSLTMGENQRGFVRALHESTAIADRIREAIADAPLKLVMLALSDLLQEHLTHLVMLEQDREQMPLPKVLS
Ga0318516_105456561	3300031543	Soil	MGESQRAFEQALHESTAIADRIREVIADAPPKPVMLALTDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0318541_100654942	3300031545	Soil	MTDGSDDGTVQNQQRAFERALHESTIVADRIREAIGDAPPKLVMLALSDLLQEHLTRLVTIEPDKQQTDLSPLRERLLKVLS
Ga0318541_101074631	3300031545	Soil	MTAGSDQRDFERALRESTVIADRIREVIADAPPKLVMLALTDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0318541_101658881	3300031545	Soil	MTGDLDDGTACRAFERALHESTVIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMAEPDTEQTLLLKVLS
Ga0318541_107948701	3300031545	Soil	LMNENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQAPLP
Ga0318538_105127581	3300031546	Soil	MTDCSDDSTARGRSMTMDENQRTFVRALHESTVIADRIRETIADAPAKLVLLALSDLLQEHLTAFVRVERDSEQARKVLS
Ga0310915_100014211	3300031573	Soil	ALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Ga0310915_103178261	3300031573	Soil	MTDSSDDGTARPAFVRALHESTTIADRIREAIADAPPKLVMLALSDLLQEHLTHLVMVERDRKQTPLTKVLS
Ga0310915_103571211	3300031573	Soil	MTDGSDDDGAARPAFERALHESTAIADRIREAIADAPPKLAMLALSDLLQEHLTRLVMAEPDTEQTPLPKALS
Ga0318572_103728352	3300031681	Soil	DDGTVQNQQRAFERALHESTIVADRIREAIGDAPPKLVMLALSDLLQEHLTRLVTIEPDKQQTDLSPLRERLLKVLS
Ga0318572_108593271	3300031681	Soil	MTDCSDGSTARGRSMTMDENQRTFVRALHESTVIADRIRETIADAPAKLVLLALSDLLQEHLTAFVRVERDSEQARKVLS
Ga0318560_102942561	3300031682	Soil	MTDGSDDDGAARPAFERALHESTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVIAEPDTERTPLPKALS
Ga0306917_100087686	3300031719	Soil	GNQRAFVRALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Ga0306917_102118682	3300031719	Soil	AFERALHESTIVADRIREAIGDAPPKLVMLALSDLLQEHLTRLVTIEPDKQQTDLSPLRERLLKVLS
Ga0306917_109126221	3300031719	Soil	NQGDFERALHESTAIAERIREAIADAPPKLVMLALSDLLQEHLTRLVMVDGEQTALSPLLELLPKVLS
Ga0306918_100533755	3300031744	Soil	MTDGSDETAHRVFERALHESTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVIAEPDTERTPLPKALS
Ga0306918_102570031	3300031744	Soil	MGENQRAFVRALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Ga0318502_104287992	3300031747	Soil	MDENQRTFVRALHESTVIADRIRETIADAPAKLVLLALSDLLQEHLTAFVRVERDSEQARKVLS
Ga0318509_108247482	3300031768	Soil	MTDGSDDDGAARPAFERALHESTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVIAEPDTERTPL
Ga0318521_108100992	3300031770	Soil	LHESTAIADLIREAIADAPPKLAMLALCDLLQEHLTCLVMVEADREQTPAPKVLS
Ga0318521_109793281	3300031770	Soil	MTDSSDDGTARPAFVRALHESTTIADRIREAIADAPPKLLMLALSDLLQEHLTHLVMVERDRKQTPLTKVLS
Ga0318546_107322401	3300031771	Soil	MPDCSDDSTARGRSMTMDENQRTFVRALHESTVIADRIRETIADAPAKLVLLALSDLLQEHLTAFVRVERDSEQARKVLS
Ga0318546_113547352	3300031771	Soil	GCSLMNENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQAPLPKMVS
Ga0318547_100997024	3300031781	Soil	MILLLGTKRGAMGESQRAFEQALHESTAIADRIREVIADAPPKLVMLALTDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0318547_104302842	3300031781	Soil	MTDDLDDGTARRAFVRSLHESTTIADRIREAIADAPPNLVMLALSDLLQEHLTRLVMVEPDRETAAAA
Ga0318576_103969572	3300031796	Soil	TVIADRIREVIADAPPKLVMLALTDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0318523_104533381	3300031798	Soil	MSESQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLTHLVMVEPDKEKTPLPKVLS
Ga0318568_108900011	3300031819	Soil	LHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQAPLPKMVS
Ga0318517_101945322	3300031835	Soil	MTDGSDDDGAARPAFERALHEFTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVIAEPDTERTPLPKALS
Ga0306919_100093544	3300031879	Soil	VVRALHESTAIADRIREAIAHAPPKLVMLALSDLLQEHLTRLVMVEPNREQTPLPKVLS
Ga0306919_101252322	3300031879	Soil	RMTDCSDGSTARGRSMTMDENQRTFVRALHESTVIADRIRETIADAPAKLVLLALSDLLQEHLTAFVRVERDSEQARKVLS
Ga0306919_101427852	3300031879	Soil	MTDSSDDGTARPAFVRALHESTTIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMVDGEQTALSPLLELLPKVLS
Ga0306919_108385261	3300031879	Soil	MTDGSDETAHRVFERALHESTAIADRIREAIADAPPKLAMLALSDLLQEHLTRLVMAEPDTEQTPLPKALS
Ga0318544_100537052	3300031880	Soil	MILLLGTKRGGAMGESQRAFEQALHESTAIADRIREVIADAPPKPVMLALTDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0306925_100224201	3300031890	Soil	MTAGSDQRDFERALRESTVIADRIREVIADAPPKLVMLALTDLLQEHLTHLVMVEPDREQ
Ga0306925_100788763	3300031890	Soil	VVRALHESTAIADRIREAIAHAPPKLVMLALSDLLQEHLTRLVMVEPNREQTPLPNVLS
Ga0306925_100919432	3300031890	Soil	VVGCSLMNENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQAPLPKMVS
Ga0306925_102508692	3300031890	Soil	MSDNQRAFEQALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLARLVMVEPDRKQSPLPKVLS
Ga0306925_104155793	3300031890	Soil	LIARLGIAAWAMSENQRAFERALHESTDIADRIREAIADAPPKLVMLALSDLLQENLTRLVMLEPDREQTPLPKVLS
Ga0306925_104893242	3300031890	Soil	MCENQRAFERALHESTVIADRIREAIAGAPPKLVMLALSDLLQEHLTRLVTVESDKEQTLLSKMLFSN
Ga0306925_106542131	3300031890	Soil	VRALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Ga0306925_107309361	3300031890	Soil	MSENQRAFERALHESTAIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMVEHNGVRVP
Ga0306925_114884641	3300031890	Soil	GTARPAFVGALHEVTAIADRIREAIADAPPKLVMLALSDLLQEHLTRLVVEPAREQTPLPKLLS
Ga0318520_106661742	3300031897	Soil	AFERALHESTVIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMAEPDTEQTLLLKVLS
Ga0306923_102383332	3300031910	Soil	LMNENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQAPLPKMVS
Ga0306923_102409521	3300031910	Soil	MIDSSDDSTAWDCSLTMGENQRAFVRALHESTAIADRIREVIADAPPELVMLALSDLLQEHLTRLVMVEPDNEQTPVPKVLS
Ga0306923_115558382	3300031910	Soil	MTDGSDQRDFERALHESTVIADRIREAIAGAPPKLVMLALSDLLQENLTRLVMVEPDIEQAPLPNLVS
Ga0306923_118554251	3300031910	Soil	ESQRTFERALHESTAIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMVELDGEQTPPLNSI
Ga0306923_122792601	3300031910	Soil	QPTVQMIARLGIAAWAMSENQRAFERALHESTDIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQTPGSSQG
Ga0306921_103967172	3300031912	Soil	MIARSLTMGENQRAFVRALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Ga0306921_104756054	3300031912	Soil	MTAGSDQRDFERALRESTVIADRIREVIADAPPKLVMLALTDLLQEHLTHLVMVEPDREQTPLPKVL
Ga0306921_114324711	3300031912	Soil	MTDDLDDGTARPAFVRALHESTAIADRIREAIADAPPKLVMLALSDLLQERLTRLVMAEPDTEQTPVPKVLS
Ga0306921_116357511	3300031912	Soil	MTDGSDETAHRVFERALHESTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVIAEPDTE
Ga0306921_121474382	3300031912	Soil	MSENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDRKQTPLPKVL
Ga0310912_113709181	3300031941	Soil	MSENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLTHLVMVEPDKEKTPLPKVLS
Ga0310916_103091053	3300031942	Soil	MTHGSDDSPARGCSLAMSENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLARLVMVEPDRKQSPLPKVLS
Ga0310916_105015291	3300031942	Soil	MHRFGQPSLLRGCSLATSENQRAFERALHESVAIADRIREAIVDAPPKLVMLALSDLLQEHLTRLVMVEPDRKQTPPPRVVS
Ga0310916_108138961	3300031942	Soil	MILLLGTKRGGAMGESQRAFEQALHESTAIADRIREIIADAPPKLVMLALTDLLQEHLTHLVMVEPDR
Ga0310916_110622881	3300031942	Soil	MTDDSDDGPARPVFERALHESTVIADRIREAIAGAPPKLVMLALSDLLQEHLTRLVTVESDKEQTLLSKMLFSN
Ga0310916_115119582	3300031942	Soil	RALHESTAIADRIREAIADAPPKLVMLALSDLLQEHLTRLVEPHREQTPLPKVLS
Ga0310916_115692761	3300031942	Soil	MIARLGIAAWAMSENQRAFERALHESTDIADRIREAIADSPPKLVMLALSDLLQENLTRLVMVEPDR
Ga0310913_100286622	3300031945	Soil	MTDGSDDGTVQNQQRAFERALHESTIVADRIREAIGDAPPKLVMLALSDLLQEHLTRLVMVDGEQTALSPLLELLPKVLS
Ga0310910_102326811	3300031946	Soil	MTDGSDDDGAARPAFERALHESTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVIAEPDTERTPLPKAL
Ga0310910_107503001	3300031946	Soil	MGGNQRAFVRALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Ga0310909_109703852	3300031947	Soil	MIARLGIAAWAMSENQRAFERALHESTDIADRIREAIADSPPKLVMLALSDLLQENLTRLVMVEPDREQAPD
Ga0306926_101050842	3300031954	Soil	MNENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQAPLPKMVS
Ga0306926_101744543	3300031954	Soil	LHRGTPITDDLDDDTACRASVVRALHESTAIADRIREAIAHAPPKLVMLALSDLLQEHLTRLVMVEPNREQTPLPKVLS
Ga0306926_104948051	3300031954	Soil	MTDGSDDDGAARPAFERALHEFTAIADRIREAIADAPPNLVMLALSDLLQEHLTRLVIAEPDT
Ga0306926_106223232	3300031954	Soil	MTGDLDDGTACRAFERALHESTVIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMAEPDTEQ
Ga0306926_107208332	3300031954	Soil	MIARLGIAAWAMSANQRAFERALHESTDIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDRKQTPLPKVL
Ga0306922_100581563	3300032001	Soil	MTDGSDDGTVQNQQRAFERALHESTIVADRIREAIGDAPPILVMLALSDLLQEHLTRLVTIEPDKQQTDLSPLRERLLKVLS
Ga0306922_107069531	3300032001	Soil	LAEVVGCSLMNENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQAPLPKMVS
Ga0306922_107193662	3300032001	Soil	MGESQRAFEQALHESTAIADRIREAIADAPPKLVMLALTDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0306922_111688412	3300032001	Soil	MTDGSDRRAFERALHESTAIADRIRETIADAPPKLVMLALSDLLQENLTRLVMVEPDREQTPLLKMPHSPSVQSN
Ga0318507_100343602	3300032025	Soil	MTDGSDDGTARPAFVRALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0310911_106472681	3300032035	Soil	AGAPMNCDSDEGTVRRLALTENQRTFERALHESTAIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMAEPDTEQTLLLKVLS
Ga0318559_102325743	3300032039	Soil	MTAGSDQRDFERALRESTAIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMVEPDRECTK
Ga0318570_102897882	3300032054	Soil	GSTARGRSMTMDENQRTFVRALHESTVIADRIRETIADAPAKLVLLALSDLLQEHLTAFVRVERDSEQARKVLS
Ga0318505_105561341	3300032060	Soil	RMTDGSDDGTARRVFERALHGSTVIADRIREAIADAPPKLVMLALSDLLQEHLTRLVTIEPDKQQTDLSPLRERLLKVLS
Ga0318510_104823451	3300032064	Soil	MTGDLDDGTACRAFERALHESTVIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMAEPDTEQTLLLK
Ga0306924_100205571	3300032076	Soil	RSLTMGENQRAFVRALHESTAIADRIREVIADAPPKLVMLALSDLLQEHLTRLVTVEPDREQTPVPKVLS
Ga0306924_100813304	3300032076	Soil	MTDGSDDDGAARPAFERALHESTAIADRIREAIADAPPNLVMLALSDLLQEHLSRLVIAEPDTERTPLPKALS
Ga0306924_102727232	3300032076	Soil	QMIARLGIAAWAMSENQRAFERALHESTDIADRIREAIADSPPKLVMLALSDLLQENLTRLVMVEPDIEQAPLPNLVS
Ga0306924_117212933	3300032076	Soil	MSENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLARLVMVEPDRKQSPLPKVLS
Ga0306924_122911931	3300032076	Soil	SDVERGGRMTDGSDDGTARRVFERALHGSTVIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMAEPHTEQTPLPKVLS
Ga0306920_1001064134	3300032261	Soil	MTAGSDQRDFERALRESTVIADRIREAIADAPPKLVMLALTDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0306920_1003016232	3300032261	Soil	LSDDLDDSTARRAFVRALHESTVIADRIREAIADAPPKLVMLALSDLLQEHLTHSVMVEPDREQTPLSPLRERLPKMLS
Ga0306920_1003062791	3300032261	Soil	MTTDDDTAHPAFVRALHESTVIAARIREAIADAPPNLVTLALSDLLQEHLTRLVMVELDREQTPLPKVLS
Ga0306920_1004703762	3300032261	Soil	MSCAKRAGGRMTDGTAQRAFVRALHESTSIADRIREAIAGAPPKLVMLALSDLLQEHLTHSVMVESDREQMDTEQTLPKVLS
Ga0306920_1014858472	3300032261	Soil	MTDGSDRRAFERALHESTAIADRIRETIADAPPKLVMLTLSDLLQENLTRLVMVEPDREQTPLLKMPHSPSVQSN
Ga0306920_1015024612	3300032261	Soil	MIARLGIAAWAMSANQRAFERALHESTDIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQTPGSSQG
Ga0306920_1030080942	3300032261	Soil	MTDGSDAQRAFERALHESTGIADRIREAIADAPPRLVMLALSDLLQEHLTRLVMVESDSEQTPFPKVLS
Ga0306920_1031055411	3300032261	Soil	AMSENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQEHLARLVMVEPDRKQSPLPKVLS
Ga0306920_1035841461	3300032261	Soil	VLLLGAMGKSQGDFERALRESTVIADRIREAIADAQPKLVMLALSDLLQEHLTRLVMVDPETAQAPLLKVLS
Ga0310914_101360871	3300033289	Soil	MTDGSDDGTVQNQQRAFERALHESTIVADRIREAIGDAPPKLVMLALSDLLQEHLTRLVT
Ga0310914_103624811	3300033289	Soil	LHESVAIADRIREAIADAPPKLVMLALSDLLQEHLTRLVMAEPDTEQTLLLKVLS
Ga0310914_108211002	3300033289	Soil	MTGDLDDGTACRAFERALHESTVIADRIREAIADAPPKLVMLALSDLLQEHLTHLVMVEPDREQTPLPKVLS
Ga0310914_112258312	3300033289	Soil	GWVGMGENQRDFVRALHESTAIADRIREAIADAPPKLVLLALSDLLQEHLTRLVELDRERAPLSSLRERPPILS
Ga0310914_112962001	3300033289	Soil	LMNENQRAFERALHESVAIADRIREAIADAPPKLVMLALSDLLQENLTRLVMVEPDREQA
Ga0318519_108884331	3300033290	Soil	RESTVIADRIREVIADAPPKLVMLALTDLLQEHLTHLVMVEPDREQTPLPKVLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F048687

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences