Metagenome / Metatranscriptome Family F048653

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048653
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	82 residues
Representative Sequence	MDIHILALGAVTIRRAQDAISSCEACNKDAELPFDWILDEVTGRDGSTTDYFLTEPAKCPRCGSVIIEKTLVEADGGVFSL
Number of Associated Samples	102
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.30 %
% of genes near scaffold ends (potentially truncated)	26.35 %
% of genes from short scaffolds (< 2000 bps)	83.78 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.595 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (20.946 % of family members)
Environment Ontology (ENVO)	Unclassified (31.757 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.757 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.18% β-sheet: 12.84% Coil/Unstructured: 66.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00710	Asparaginase	31.08
PF02597	ThiS	12.16
PF05163	DinB	10.14
PF00291	PALP	4.05
PF12867	DinB_2	3.38
PF05228	CHASE4	1.35
PF13570	PQQ_3	0.68
PF13354	Beta-lactamase2	0.68
PF05193	Peptidase_M16_C	0.68
PF13795	HupE_UreJ_2	0.68
PF02517	Rce1-like	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	62.16
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	12.16
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	12.16
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	10.14
COG3322	Extracellular (periplasmic) sensor domain CHASE (specificity unknown)	Signal transduction mechanisms [T]	1.35
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.59 %
Unclassified	root	N/A	5.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.59 %
Unclassified	root	N/A	5.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.59 %
Unclassified	root	N/A	5.41 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.51 %
Unclassified	root	N/A	5.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.35 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	51.35 %
Unclassified	root	N/A	5.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.35 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.35 %
Unclassified	root	N/A	5.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.35 %
Unclassified	root	N/A	5.41 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.68 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.35 %
Unclassified	root	N/A	5.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.68 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.35 %
Unclassified	root	N/A	5.41 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.68 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101648848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2597	Open in IMG/M
3300000559\|F14TC_102330966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300001431\|F14TB_106661991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300003267\|soilL1_10197097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1248	Open in IMG/M
3300003319\|soilL2_10165886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2089	Open in IMG/M
3300003321\|soilH1_10113318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300003321\|soilH1_10252481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1680	Open in IMG/M
3300003324\|soilH2_10134833	All Organisms → cellular organisms → Bacteria	3797	Open in IMG/M
3300004114\|Ga0062593_100186323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1632	Open in IMG/M
3300004139\|Ga0058897_11129950	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300004157\|Ga0062590_101331737	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300004157\|Ga0062590_102254988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300004633\|Ga0066395_10013519	All Organisms → cellular organisms → Bacteria	3085	Open in IMG/M
3300005171\|Ga0066677_10113551	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300005171\|Ga0066677_10217404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300005171\|Ga0066677_10637992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300005174\|Ga0066680_10954191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005176\|Ga0066679_10895371	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005180\|Ga0066685_10440519	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300005184\|Ga0066671_10374062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300005187\|Ga0066675_10742573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300005332\|Ga0066388_101228197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300005332\|Ga0066388_102764705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300005332\|Ga0066388_103243536	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005332\|Ga0066388_105390918	Not Available	648	Open in IMG/M
3300005332\|Ga0066388_105787396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300005332\|Ga0066388_106150728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300005332\|Ga0066388_106493385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005332\|Ga0066388_107600959	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005353\|Ga0070669_100496871	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300005445\|Ga0070708_100458257	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300005467\|Ga0070706_101539859	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300005468\|Ga0070707_100617618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300005518\|Ga0070699_100616639	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300005555\|Ga0066692_10404731	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300005560\|Ga0066670_10248951	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300005598\|Ga0066706_10744650	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300005713\|Ga0066905_100000888	All Organisms → cellular organisms → Bacteria	9471	Open in IMG/M
3300005713\|Ga0066905_100056994	Not Available	2431	Open in IMG/M
3300005713\|Ga0066905_100171948	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300005713\|Ga0066905_100191872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1518	Open in IMG/M
3300005719\|Ga0068861_101500856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300005764\|Ga0066903_100547490	Not Available	1983	Open in IMG/M
3300005764\|Ga0066903_102113150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300005764\|Ga0066903_104401105	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300006034\|Ga0066656_11119083	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300006049\|Ga0075417_10233106	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300006796\|Ga0066665_10121613	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300006797\|Ga0066659_10030885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3202	Open in IMG/M
3300006797\|Ga0066659_10169482	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300006844\|Ga0075428_100288146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1767	Open in IMG/M
3300006844\|Ga0075428_101083784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300006844\|Ga0075428_101295480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300006844\|Ga0075428_101926896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300006845\|Ga0075421_100346452	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300006845\|Ga0075421_100426605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1587	Open in IMG/M
3300006847\|Ga0075431_100045324	All Organisms → cellular organisms → Bacteria	4533	Open in IMG/M
3300006852\|Ga0075433_11092742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300006852\|Ga0075433_11557114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300006854\|Ga0075425_100117370	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300006854\|Ga0075425_100262497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1987	Open in IMG/M
3300006854\|Ga0075425_102267368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300006865\|Ga0073934_10142128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1726	Open in IMG/M
3300006871\|Ga0075434_100167927	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300006880\|Ga0075429_100681609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300006881\|Ga0068865_100258712	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300006904\|Ga0075424_101670519	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300006904\|Ga0075424_102627853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300009094\|Ga0111539_10400936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1598	Open in IMG/M
3300009094\|Ga0111539_12465599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300009100\|Ga0075418_12023364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300009100\|Ga0075418_12581894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300009137\|Ga0066709_104686334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300009147\|Ga0114129_10231710	All Organisms → cellular organisms → Bacteria	2487	Open in IMG/M
3300009147\|Ga0114129_11442782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300009156\|Ga0111538_10292147	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300009156\|Ga0111538_11814097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300009162\|Ga0075423_12944763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300009609\|Ga0105347_1279535	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300009678\|Ga0105252_10553948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300009792\|Ga0126374_10405109	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300009814\|Ga0105082_1041162	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300010043\|Ga0126380_10051066	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300010046\|Ga0126384_10119403	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300010047\|Ga0126382_10072442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2118	Open in IMG/M
3300010047\|Ga0126382_12402636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300010358\|Ga0126370_11020867	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300010358\|Ga0126370_11401973	Not Available	660	Open in IMG/M
3300010359\|Ga0126376_12602635	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300010360\|Ga0126372_10212260	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300010360\|Ga0126372_12319093	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300010361\|Ga0126378_11962664	Not Available	667	Open in IMG/M
3300010362\|Ga0126377_11383732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300010366\|Ga0126379_10821444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300010366\|Ga0126379_11672339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300010366\|Ga0126379_13175102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300010376\|Ga0126381_101248090	Not Available	1074	Open in IMG/M
3300010397\|Ga0134124_10346755	All Organisms → cellular organisms → Bacteria → Acidobacteria	1398	Open in IMG/M
3300010398\|Ga0126383_10126876	Not Available	2337	Open in IMG/M
3300010398\|Ga0126383_10340908	Not Available	1515	Open in IMG/M
3300010398\|Ga0126383_11536727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300010400\|Ga0134122_11770870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300011120\|Ga0150983_12182563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300011120\|Ga0150983_15215611	All Organisms → cellular organisms → Bacteria → Acidobacteria	2026	Open in IMG/M
3300011416\|Ga0137422_1019680	All Organisms → cellular organisms → Bacteria → Acidobacteria	1586	Open in IMG/M
3300011434\|Ga0137464_1000534	All Organisms → cellular organisms → Bacteria	12159	Open in IMG/M
3300011439\|Ga0137432_1008000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2942	Open in IMG/M
3300012167\|Ga0137319_1085599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300012173\|Ga0137327_1047094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300012205\|Ga0137362_10413232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300012685\|Ga0137397_10103561	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300012948\|Ga0126375_10015316	All Organisms → cellular organisms → Bacteria	3410	Open in IMG/M
3300012948\|Ga0126375_10119800	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300012948\|Ga0126375_11038117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300012948\|Ga0126375_11488443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300012948\|Ga0126375_11722998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300012971\|Ga0126369_11341089	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300013308\|Ga0157375_12137494	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300013308\|Ga0157375_12833983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300015371\|Ga0132258_10537148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2929	Open in IMG/M
3300015373\|Ga0132257_101712492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300015374\|Ga0132255_101207534	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300016270\|Ga0182036_10183269	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300016319\|Ga0182033_10563271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300016357\|Ga0182032_10399039	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300016357\|Ga0182032_11586219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300018468\|Ga0066662_10061919	All Organisms → cellular organisms → Bacteria	2453	Open in IMG/M
3300018482\|Ga0066669_11107458	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300022724\|Ga0242665_10086205	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300025922\|Ga0207646_10026920	All Organisms → cellular organisms → Bacteria	5243	Open in IMG/M
3300025930\|Ga0207701_10599908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	938	Open in IMG/M
3300026118\|Ga0207675_100903702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300026315\|Ga0209686_1126225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300026537\|Ga0209157_1371025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300027873\|Ga0209814_10154738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300027874\|Ga0209465_10061690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1807	Open in IMG/M
3300027880\|Ga0209481_10136239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1206	Open in IMG/M
3300027909\|Ga0209382_10046150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	5204	Open in IMG/M
3300027909\|Ga0209382_10320536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1743	Open in IMG/M
3300027909\|Ga0209382_11634730	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031716\|Ga0310813_10896616	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300031720\|Ga0307469_12374387	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300031740\|Ga0307468_101796695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300031890\|Ga0306925_11459866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300031945\|Ga0310913_10194822	All Organisms → cellular organisms → Bacteria	1414	Open in IMG/M
3300032180\|Ga0307471_102690433	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300032180\|Ga0307471_103958835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300034817\|Ga0373948_0076396	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.30%
Host-Associated	Host-Associated	27.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.89%
Plants	Host-Associated → Plants	27.70%
Aquatic	Environmental → Aquatic	5.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.65%
Sediment	Environmental → Aquatic → Sediment	4.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.05%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.30%
Loam	Environmental → Terrestrial → Soil → Loam	20.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.35%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.68%
Sand	Environmental → Terrestrial → Soil → Sand	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.35%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.46%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.05%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.35%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.68%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1016488484	3300000364	Soil	MTIQILALGTATIRRAQDAISSCEVCNKDAELPFDWILDEVTGRNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
F14TC_1023309661	3300000559	Soil	LGPRISAKSNASSINTEMNIHILALGASTIRRAQDSISSCEGCNKDAELPLDWILDQVTGQDGSNTDYFLTEPARCPRCGSTVIEKTLVEADSGVFSL*
F14TB_1066619911	3300001431	Soil	MNIHILALGASTIRRAQDSISSCEGCNKDAELPFDWILDQXXXXXXXXXXXFLTEPARCPRCGSTVIEKTLVEADSGVFSL*
soilL1_101970972	3300003267	Sugarcane Root And Bulk Soil	MMPQINIHIVVLGTATIRRAQEAISSCEACNDDAELPFDWILDEVTGRDGSTTDYFLTEPVRCPRCGSSVIEKTLVEADGGVFSL*
soilL2_101658861	3300003319	Sugarcane Root And Bulk Soil	MMPQINIHIVVLGTATIRRAQEAISSCEACNDDAELPFDWILDEVTGRDGSTTDYFLTEPVRCPRCGSSVIEKTLVEADGGV
soilH1_101133182	3300003321	Sugarcane Root And Bulk Soil	MSIEILALGAITIRRAQEAIASCEACNKDAELPFDWILDEITGRGGSTTDYFLTEPARCPRCGCGIIEKTLVEADAGVFSL*
soilH1_102524812	3300003321	Sugarcane Root And Bulk Soil	MNIHVLAIGAVTIRRAQEAISSCEACNREAELPFDWILDEVTGRDSSTTDYFLTEAARCPRCGSNIVEKTLVEADSGVFSF*
soilH2_101348334	3300003324	Sugarcane Root And Bulk Soil	MDLHVLAIGASTIRRAQEAIASCEACNEHAELPFDWILDEVTGRDGSTTDYFLTELARCPRCGGDIVEKTLVEADSGVLSL*
Ga0062593_1001863233	3300004114	Soil	MPQLNIHIVVLGTVTIRRAQEAISSCEACNDDAELPFDWILDEVTGRDGSTTDYFLTEPVRCPRCGSSVIEKTLVEADGGVFSL*
Ga0058897_111299502	3300004139	Forest Soil	MDYEVLALSTATIRRAQDAISSCESCNSEAEFPFDWVLDEVTGRDGSTTDYFLTEPAHCPRCGRSVIEKTLVEPYGGVYSF*
Ga0062590_1013317371	3300004157	Soil	RLRMCARFNGSSISTDMAIQILALAGPTIRRAQEAISSCEACNKDAELPFDWILDEITGRDGSTTDYFLTETVRCPRCGCDVSEKTLVEADGGVFST*
Ga0062590_1022549882	3300004157	Soil	MDIHILALGAITIRRAQDAISSCEACNKDAELPFDWILDEVTGRDGSTTDYFLTEPAKCPRCGSIIMEKTLVEADGGVFSL*
Ga0066395_100135195	3300004633	Tropical Forest Soil	MSISMTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0066677_101135512	3300005171	Soil	MTLKLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEITGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL*
Ga0066677_102174042	3300005171	Soil	MNIAVMALSTATIRRAQNAIASCESCNSEAELPFDWVLDEVTGCDGSTTDYFLTEPARCPRCGRSVIEKTLVEPHGEVYFLT*
Ga0066677_106379921	3300005171	Soil	MNFELLALSTATIRRAQNAISSCESCNSEAELPFDWVLDEVTGCDGSTTDYFLTEPARCPRCGRSVIEKTLVEPYGGVYSF*
Ga0066680_109541911	3300005174	Soil	SAATIRKAQEAIASCEACNNDAELPFDWILDEITGCKGSTTDYFLTEPARCPRCGCSVIEKTLVEADGGVFSL*
Ga0066679_108953712	3300005176	Soil	MGIKLLAVSADTIRRAQQAIASCESCNNDAELPFDWVLDEITGCDATTTDYFLTEPARCPRCGCSVIEKTLVEADGGVFSL*
Ga0066685_104405192	3300005180	Soil	MTIHILALSTATIRRAQEVISSCEACNKEAELPFDWVLDEVTGCDRSTTDYFLTEAARCPRCGYTIIEKTLVEAEL*
Ga0066671_103740622	3300005184	Soil	MSFEVLVLSAATIRRAQNAISSCEFCNSEAELPFDWVLDEVTGCDGSTTDYFLTEPARCPRCGRSVIEKTLVEPHGGVYSF*
Ga0066675_107425731	3300005187	Soil	MNLLAVSAVTIRRAQDAISSCEACNHDAELPFDWVLDQITGCDGSTTDYFLTQPARCPRCGCSVIEKTLVEPDGGVFSL*
Ga0066388_1012281973	3300005332	Tropical Forest Soil	MTIQILALGAATIRRAQEAISSCEACNKDAELPFDWILDEVTGHDGTTTDYFLTEPAQCPRCGRSIIEKTLVEADGGVNSGTVA*
Ga0066388_1027647052	3300005332	Tropical Forest Soil	MNIHILALSASTIRRAQDSISSCEGCNHDAELPFDWILDQVTGRDGSTTDYFLTEPARCPRCGSPIIEKTLVEADGGVLSF*
Ga0066388_1032435362	3300005332	Tropical Forest Soil	MTPQINIHIVVLGTATIRRAQEAISSCEACNDDAELPFDWILDEVTGRDGSTTDYFLTEPVRCPRCGSSVIEKTLVEADGGVFSI*
Ga0066388_1053909181	3300005332	Tropical Forest Soil	ALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0066388_1057873961	3300005332	Tropical Forest Soil	MGMQILALGVVTIRRAEETISSCEACNKDAELPFDWILDEVTARDGSTTDYFLTEPARCPRCGRNIIEKTLVEAEGGVLSV
Ga0066388_1061507282	3300005332	Tropical Forest Soil	MNIQVLALGTATIRRAQEAISSCEACNKDAELPFDWILDEVTGHDGTNTDYFLTEPAQCPRCGCSVVEKTLVEADGGVFSV*
Ga0066388_1064933852	3300005332	Tropical Forest Soil	MDIHVLAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAHCPRCNASIVEKTLVEADSGVFSL*
Ga0066388_1076009592	3300005332	Tropical Forest Soil	MSISMTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSVIEKTLVEADGGIFSV*
Ga0070669_1004968712	3300005353	Switchgrass Rhizosphere	MSIQILALGAMTIRRAQEAISSCESCNHEAELPFDWILDEITGRDGSTTDYFLTESVRCPRCGYGVNEKTLVEAEGGVFSI*
Ga0070708_1004582572	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTVKLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEITGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL*
Ga0070706_1015398592	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSINILAVSAATIRKAQQAIASCEACNNNAELPFDWILDEITGCKGSTTDYFLTEPARCPRCGCSVIEKTLVEADGGVFSL*
Ga0070707_1006176182	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKLLALSASTIRRAQDSISSCEACNREAELPFDWVLDEVTGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPH
Ga0070699_1006166392	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTTKLLALSASTIRRAQDSISSCEACNREAELPFDWVLDEVTGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL*
Ga0066692_104047312	3300005555	Soil	VRSSAFSTSTKYANMNFEVLALSTATIRRAQNAISSCESCNSEAELPFDWVIDEVTGCDGANTDYFLTEPARCPRCGRTVIEKTLVEPHDGVYRS*
Ga0066670_102489512	3300005560	Soil	MALKLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEITGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL*
Ga0066706_107446502	3300005598	Soil	MAIKLLAISADTIRRAQQAIASCESCNNDAELPFDWVLDEITGCDGTTTDYFLTEPARCPRCGCSVIEKTLVEADGGVFSL*
Ga0066905_1000008885	3300005713	Tropical Forest Soil	MTIQILALGGATIRRAQEAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGGGILEKTLVEADGGVFTV*
Ga0066905_1000569944	3300005713	Tropical Forest Soil	RRRIFERFNGSLMSISMTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0066905_1001719483	3300005713	Tropical Forest Soil	MTIQILALGAATIRRAQEAISSCEACNKEAELPFDWILDEVTGHDGATTDYFLTEPAQCPRCGRSIIEKTLVEADGGVNSGTVA*
Ga0066905_1001918721	3300005713	Tropical Forest Soil	MTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0068861_1015008562	3300005719	Switchgrass Rhizosphere	MDIHILALGAITIRRAQDAISSCEACNKDAELPFDWILDEVTGRDGSTTDYFLTEPAKCPRCGSIIMEKTLVEADGGVFS
Ga0066903_1005474901	3300005764	Tropical Forest Soil	QILALGVVTIRRAEEAISSCEACNKDAELPFDWILDEVTARDGSTTDYFLTEPARCPRCGRNIIEKTLVEAEGGVLSV*
Ga0066903_1021131502	3300005764	Tropical Forest Soil	ASTIRRAQAAISSCEACNKDAELPFDWILDEVTGRDGSTTDYFLTEPARCPRCGCIVVEKTLVEADGGVFSV*
Ga0066903_1044011052	3300005764	Tropical Forest Soil	MNIEVLALSATTIRRAQESISSCESCNNDAELPFDWVLDEVTGRDGSITDYFLTEPARCPRCGCSVIEKTLVEPHGGVFSI*
Ga0066656_111190832	3300006034	Soil	KLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEITGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL*
Ga0075417_102331063	3300006049	Populus Rhizosphere	RRRRTFERFNGSLISISMTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSA*
Ga0066665_101216132	3300006796	Soil	MTIKLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEVTGSDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL*
Ga0066659_100308854	3300006797	Soil	VRSSAFSTSTKYANMNFEVLALSTATIRRAQNAISSCESCNSEAELPFDWVIDEVTGCDGANTDYFLTEPARCPRCGRTVIEKTLVEPHDG
Ga0066659_101694822	3300006797	Soil	MTLKLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEVTGSDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL*
Ga0075428_1002881462	3300006844	Populus Rhizosphere	MSISMTIQILALGTSTIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0075428_1010837842	3300006844	Populus Rhizosphere	FNASSTSTEMNIHILALGANTIRRAQDAISSCESCNQDAELPFDWILDEVTGRDGSNTDYFLTEPARCPRCGSSIVEKTLVEADGGVFSL*
Ga0075428_1012954802	3300006844	Populus Rhizosphere	MSIHVLALGAATIRRAQDAISSCEACNQDAELPFDWILDEVTGRDGSTTDYFLTETVRCPRCGSNVAEKTLVEADGGVFSL*
Ga0075428_1019268962	3300006844	Populus Rhizosphere	MTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADSGVFSA*
Ga0075421_1003464522	3300006845	Populus Rhizosphere	MNIHILALGANTIRRAQDAISSCESCNQDAELPFDWILDEVTGRDGSNTDYFLTEPARCPRCGSSIVEKTLVEADGGVFSL*
Ga0075421_1004266052	3300006845	Populus Rhizosphere	MTIQILALGTSTIRRAQDAISSCEACNKDAELPFDWILDEVTGRNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0075431_1000453246	3300006847	Populus Rhizosphere	MTIQILALGTSTICRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0075433_110927421	3300006852	Populus Rhizosphere	MTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVDADGGVF
Ga0075433_115571142	3300006852	Populus Rhizosphere	MDIHILALGAVTIRRAQDAISSCEACNKDAELPFDWILDEVTGRDGSTTDYFLTEPAKCPRCGSVIIEKTLVEADGGVFSL*
Ga0075425_1001173703	3300006854	Populus Rhizosphere	MTIRLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEVTGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPQGGVFTL*
Ga0075425_1002624972	3300006854	Populus Rhizosphere	MDVHVLAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAQCPRCGANIVEKTLVEADSGVFSL*
Ga0075425_1022673682	3300006854	Populus Rhizosphere	MIQILALGAITIRRAQESISSCESCNREAELPFDWILDEITGRDGSTSDYFLTESVRCPRCGCGVNEKTLVEAEGGVFSI*
Ga0073934_101421282	3300006865	Hot Spring Sediment	MDIHILALGAVTIRRAQEAIASCESCNSDAELPFDWILDQVTGRDGSTTDYFLTEPARCPRCGGSVMEKTLVEADGGVFSL*
Ga0075434_1001679272	3300006871	Populus Rhizosphere	MDVHVLAIGASTIRSAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAQCPRCGANIVEKTLVEADSGVFSL*
Ga0075429_1006816092	3300006880	Populus Rhizosphere	MTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVDADGGVFSV*
Ga0068865_1002587122	3300006881	Miscanthus Rhizosphere	MTIRRAQEAISSCESCNNEAELPFDWILDEITGRDGSTTDYFLTESVRCPRCGSCVNEKTLVESEGGVFSI*
Ga0075424_1016705191	3300006904	Populus Rhizosphere	LSASTIRRAQESISSCEACNTEAELPFDWVLDEITGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL*
Ga0075424_1026278531	3300006904	Populus Rhizosphere	MSINILAVSAATIRKAQEAIASCEACNNDAELPFDWILDEVTGCKGSTTDYFLTEPARCPRCGCSVIEKTLVEAD
Ga0111539_104009362	3300009094	Populus Rhizosphere	MDVHILALGAATIRRAQDAITSCESCNKDAELPFEWILDEVTGLDGSSTDYILTEFARCPRCGSTVVETTLVEADGGVFSL*
Ga0111539_124655992	3300009094	Populus Rhizosphere	MTIQILALGTSTIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0075418_120233641	3300009100	Populus Rhizosphere	MSIHVLALGAATIRRAQDAISSCEACNQDAELPFDWILDEVTGRDGSTTDYFLTETVRCPRCGSNVAEKTL
Ga0075418_125818942	3300009100	Populus Rhizosphere	MTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSA*
Ga0066709_1046863342	3300009137	Grasslands Soil	MNIHILALGAITIRRAQDAISSCESCNEDAELPFDWILDEVTGRAGSNTDYFLTEPAKCPRCGSTIIEKTLVEADGGVFSI*
Ga0114129_102317102	3300009147	Populus Rhizosphere	MTIQLLALGVATIRRAQEAISSCESCNTDAELPFDWILDEVTGRDGSSTDYFLTEPVRCPRCGSGVIEKTLVEAEGGVFSV*
Ga0114129_114427821	3300009147	Populus Rhizosphere	MPIHILALGAITIRRAQEAIASCESCNKDAELPFDWILDEVTGCDGSTTDYFLTEPAQCPRCGCTVMEKTLVEADSGVFTL*
Ga0111538_102921473	3300009156	Populus Rhizosphere	MDIHILALGAITIRRAQDAISSCEACNRDAELPFDWILDEVTGRDGSTTDYFLTEPAKCPRCGSIIME
Ga0111538_118140972	3300009156	Populus Rhizosphere	MDVHILALGAATIRRAQDAITSCESCNKDAELPFEWILDEVTGLDGSSTDYILTEFARCPRCGSTVVEKTLVEADGGVFSL*
Ga0075423_129447631	3300009162	Populus Rhizosphere	MTIQILALGTATIRRAQDSISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0105347_12795351	3300009609	Soil	NVVALSAATIRRAQEAISSCEACNNDAELPFDWILDEVTGRDGSSTDYFLTEPAKCPRCGGSVIEKTLVEADGGVFSL*
Ga0105252_105539481	3300009678	Soil	MSIHILAIGTVTIRRAQEAISSCESCNNAAELPFDWILDEITGCDGSTTDYFLTEPARCPRCGCSVIEKTLVEADGGVFSV
Ga0126374_104051092	3300009792	Tropical Forest Soil	MTIQILALGTVTIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0105082_10411622	3300009814	Groundwater Sand	MNIYILALGANTIRRAQDAISSCEACNQDAEMPFDWILDEVTGRDGSTTDYFLTEPARCPRCGSTIMEKTLVEADGGVFSL*
Ga0126380_100510662	3300010043	Tropical Forest Soil	MTIQILALGAATIRRAQEAISSCEACNKEAELPFDWILDEVTGHDGVTTDYFLTEPAQCPRCGRSIIEKTLVEADGGVNSGTIA*
Ga0126384_101194032	3300010046	Tropical Forest Soil	MTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHDGTTTDYFLTEPAQCPRCGCIIIEKTLVEADGGVFSV*
Ga0126382_100724421	3300010047	Tropical Forest Soil	MTIQILALGAATIRRAQEAISSCEACNKDAELPFDWILDEVTGHDGTTTDYFLTEPAQCPRCGRSIIEKTLVEADGGVNSGTIA*
Ga0126382_124026361	3300010047	Tropical Forest Soil	MDIHILALGAVTIRRAQDAISSCEACNKDAELPFDWILDEVTGRDGSTTDYFLTEPAKCPRCGSVIIEKTLVEAD
Ga0126370_110208672	3300010358	Tropical Forest Soil	MSIQILALGAATIHRAQEAISSCEACNKDAELPFDWILDEVTGRDGANTDYFLTEPAQCPRCGCTIIEKTLVEADGGVFSV*
Ga0126370_114019731	3300010358	Tropical Forest Soil	SISMTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV*
Ga0126376_126026351	3300010359	Tropical Forest Soil	FSAFSISTNMDVHVLAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAHCPRCGANIVEKTLVEADSGVFSF*
Ga0126372_102122602	3300010360	Tropical Forest Soil	MGMQILALGVVTIRRAEEAISSCEACNKDAELPFDWILDEVTARDGSTTDYFLTEPARCPRCGRNIIEKTLVEAEGGVLSV*
Ga0126372_123190932	3300010360	Tropical Forest Soil	ASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAHCPRCGANIVEKTLVEADSGVFSL*
Ga0126378_119626641	3300010361	Tropical Forest Soil	RIFERFNGSLISISMTIQILALGAATIRRAQDAISSCEACNKDAELPFDWILDEVTGHDGTNTDYFLTEFAQCPRCGCSITEKTLVEGDGGVFSV*
Ga0126377_113837322	3300010362	Tropical Forest Soil	MSIQILALAASTIRRAQESISSCESCNTEAELPFDWILDEITGRDGSTTDYFLTESVRCPRCGCGVSEKTLVEAEGGVFSI*
Ga0126379_108214441	3300010366	Tropical Forest Soil	MGMQILALGVVTIRRAEETISSCEACNKDAELPFDWILDEVTARDGSTTDYFLTEPARCPRCGRNIIEKTLVEAEGGVLSV*
Ga0126379_116723392	3300010366	Tropical Forest Soil	MTIQILALGAATIRLAQEAISSCEACNKEAELPFDWILDEVTGHDGTTTDYFLTEPVECPRCGCSIIEKTLVEGDGGVFSV*
Ga0126379_131751022	3300010366	Tropical Forest Soil	MDIHVLAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRNGATTDYFLTEPAHCPRCSASIVEKTLVEADSGVFSL*
Ga0126381_1012480901	3300010376	Tropical Forest Soil	ATIRRAQEAISSCEACNRDAELPFDWILDEVTGHDGTTTDYFLTEPVECPRCGCSITEKTLVEGDGGVFSV*
Ga0134124_103467552	3300010397	Terrestrial Soil	MDVHVLAIGASTIRRAQEAIASCEACNQHAELPFDWILDEVTGRNGSTTDYFLTELARCPRCGGDIVEKTLVEADSGVFSL*
Ga0126383_101268762	3300010398	Tropical Forest Soil	MTIQILALGAATIRRAQEAISSCEACNKDAELPFDWILDEVTGHDGTTTDYFLTEPAQCPRCGRSIIEKTLVEADGGVNSGTAA*
Ga0126383_103409081	3300010398	Tropical Forest Soil	GSLMSISMTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAECPRCGCSIIEKTLVEADGGVFSV*
Ga0126383_115367271	3300010398	Tropical Forest Soil	MDVHVLAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAHCPRCGANIV
Ga0134122_117708702	3300010400	Terrestrial Soil	MSINILAVSAATIRKAQQAIASCEACNNDAELPFDWILDEITGCKGSTTDYFLTEPARCPRCGGCVIEKTLVEADGGVFSL*
Ga0150983_121825632	3300011120	Forest Soil	MSIQLVVLSTDTIRRAQEAIASCQACNNDAELPFDWVLDEITGCDGTSTDYFLTEPARCPRCGCSVIEKTLVEADGGVFSL*
Ga0150983_152156113	3300011120	Forest Soil	MNFEVLALSTATIRRAQEAISSCESCNSEAEFPFDWVLDEVTGCDGSTTDYFLTEPAHCPRCGRSVIEKTLVEPYGGVYSF*
Ga0137422_10196802	3300011416	Soil	MNINIVALSASTIRRAQEAISSCEACNNDAEMPFDWILDEVTGRDGSSTDYFLTEPAKCPRCGGSVIEKTLVEADGGVFSL*
Ga0137464_10005346	3300011434	Soil	MNINVVALSAATIRRAQEAISSCEACNNDAELPFDWILDEVTGRDGSSTDYFLTEPAKCPRCGGSVIEKTLVEADGGVFSL*
Ga0137432_10080004	3300011439	Soil	MNINIVAVSAATIRRAQEAISSCEACNNDAEMPFDWILDEVTGRDGSSTDYFLTEPAKCPRCGGSVIEKTLVEADGGVFSL*
Ga0137319_10855991	3300012167	Soil	MNINIVAVSAATIRRAQEAISSCEACNNDAELPFDWILDEVTGRDGSSTDYFLTEPAKCPRCGGSVIEKTLVEADGGVFSL*
Ga0137327_10470942	3300012173	Soil	MNINIVALSASTIRRAQEAISSCEACNNDAELPFDWILDEVTGRDGSSTDYFLTEPAKCPRCGGSVIEKTLVEADGGVFSL*
Ga0137362_104132322	3300012205	Vadose Zone Soil	MSFEVLALSAATIRRAQNAISSCEFCNSEAELPFDWVLDEVTGCDGSTTDYFLTEPARCPRCGRSVIEKTLVEPHGGVYSF*
Ga0137397_101035613	3300012685	Vadose Zone Soil	MNFEVLALSTATIRRAQSAISSCESCNSEAELPFDWVLDEVTGCDGSTTDYFLTEPARCPRCGRSVIEKTLVEPHGGVYSF*
Ga0126375_100153162	3300012948	Tropical Forest Soil	MTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQSPRCGCSIIEKTLVEADTGVFSV*
Ga0126375_101198003	3300012948	Tropical Forest Soil	MTIQILALGAATIRRAQEAISSCEACNKDAELPFDWILDEVTGHDGATTDYFLTEPAQCPRCGRSIIEKTLVEADGGVNSGTVA*
Ga0126375_110381171	3300012948	Tropical Forest Soil	MNIHIMTLGASTIRRAQDSISSCEGCNHDAELPFDWILDQVTGRDGSTTDYFLTEPARCPRCGSPIIEKTLVEADGGVFSF*
Ga0126375_114884431	3300012948	Tropical Forest Soil	MDIHVLAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAHCPRCSASILEKT
Ga0126375_117229981	3300012948	Tropical Forest Soil	MTIKLLALSASTIRRAQEVISSCEACNTEAELPFDWVLDDVTGCDGSSTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL*
Ga0126369_113410891	3300012971	Tropical Forest Soil	SAFSISTNMDVHVLAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAHCPRCGANIVEKTLVEADSGVFSL*
Ga0157375_121374941	3300013308	Miscanthus Rhizosphere	LRMCARFNGSSISTDMAIQILALAGPTIRRAQEAISSCEACNKDAELPFDWILDEITGRDGSTTDYFLTETVRCPRCGCDVSEKTLVEADGGVFST*
Ga0157375_128339832	3300013308	Miscanthus Rhizosphere	MPIQILALGAMTIRRAQEAISSCESCNNDAELPFDWILDEITGRDGSTTDYFLTESVRCPRCGCGVNEKTLVEAEGGVFSI*
Ga0132258_105371483	3300015371	Arabidopsis Rhizosphere	MSIHILALGAVTIRRAQEAVASCEACNKDAELPFDWILDEVTGRDGATTDYFLTEPARCPRCGGTIIEKTLVEADGGVFSL*
Ga0132257_1017124922	3300015373	Arabidopsis Rhizosphere	MSIHILALGAVTIRRAQEAVASCEACNKDAELPFDWILDEVTGRDGATTDYFLTEPARCPRCGGTIIEKTLV
Ga0132255_1012075342	3300015374	Arabidopsis Rhizosphere	MAIQILALAGPTIRRAQEAISSCEACNKDAELPFDWILDEITGRDGSTTDYFLTETVRCPRCGCDVSEKTLVEADGGVFST*
Ga0182036_101832692	3300016270	Soil	VRFSAFSISTNMDIHILAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAQCPRCSADIVEKTLVEADSGVFSL
Ga0182033_105632711	3300016319	Soil	MDIHILAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAQCPRCSSDIVEKTLVEADSGVFSL
Ga0182032_103990392	3300016357	Soil	MNIEIVALGTATIHRAQEVISSCEACNRDAELPFDWILDEVTGYSGSTTDYFLTEPARCPRCGGSIVEKTLVEPGREVSAFNF
Ga0182032_115862191	3300016357	Soil	MDIHILAIGASTIRRAQEVIASCEACSHRAELPFDWILADVTGRDGSTTDYFLTEPAQCPRCSSDIVEKTLVEADSGVFSL
Ga0066662_100619192	3300018468	Grasslands Soil	VRSSAFSTSTKYANMNFEVLALSTATIRRAQNAISSCESCNSEAELPFDWVIDEVTGCDGANTDYFLTEPARCPRCGRTVIEKTLVEPHDGVYRS
Ga0066669_111074582	3300018482	Grasslands Soil	MTIKLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEVTGSDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL
Ga0242665_100862052	3300022724	Soil	VRSSASLISTKYASMDYEVLALSTATIRRAQDAISSCESCNSEAEFPFDWVLDEVTGRDGSTTDYFLTEPAHCPRCGRSVIEKTLVEPYGGVYSF
Ga0207646_100269206	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTVKLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEITGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL
Ga0207701_105999081	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	SIDMSIQILALGAMTIRRAQEAISSCESCNNEAELPFDWILDEITGRDGSTTDYFLTESVRCPRCGSGVNEKTLVESEGGVFSI
Ga0207675_1009037023	3300026118	Switchgrass Rhizosphere	MDIHILALGAITIRRAQDAISSCEACNKDAELPFDWILDEVTGRDGSTTDYFLTEPAKCPRCGSIIMEKTLVEADGGVFSL
Ga0209686_11262252	3300026315	Soil	MNIAVMALSTATIRRAQNAIASCESCNSEAELPFDWVLDEVTGCDGSTTDYFLTEPARCPRCGRSVIEKTLVEPHGEVYFLT
Ga0209157_13710251	3300026537	Soil	MTIHILALSTATIRRAQEVISSCEACNKEAELPFDWVLDEVTGCDRSTTDYFLTEAARCPRCGYTIIEK
Ga0209814_101547382	3300027873	Populus Rhizosphere	MTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSA
Ga0209465_100616903	3300027874	Tropical Forest Soil	MSISMTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV
Ga0209481_101362391	3300027880	Populus Rhizosphere	MSISMTIQILALGTSTIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVEADGGVFSV
Ga0209382_100461507	3300027909	Populus Rhizosphere	MSIHVLALGAATIRRAQDAISSCEACNQDAELPFDWILDEVTGRDGSTTDYFLTETVRCPRCGSNVAEKTLVEADGGVFSL
Ga0209382_103205362	3300027909	Populus Rhizosphere	MNIHILALGANTIRRAQDAISSCESCNQDAELPFDWILDEVTGRDGSNTDYFLTEPARCPRCGSSIVEKTLVEADGGVFSL
Ga0209382_116347302	3300027909	Populus Rhizosphere	MTIQILALGTATIRRAQDAISSCEACNKDAELPFDWILDEVTGHNGTTTDYFLTEPAQCPRCGCSIIEKTLVDADGGVFSV
Ga0310813_108966162	3300031716	Soil	MDIHVLAIGASTIRRAQEAIASCEACNQHAELPFDWILDEVTGRNGSTTDYFLTELVRCPRCGANIVEKTLVEADSGVFSL
Ga0307469_123743871	3300031720	Hardwood Forest Soil	KLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEITGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL
Ga0307468_1017966951	3300031740	Hardwood Forest Soil	MMPQINIHIVVLGTATIRRAQEAISSCEACNDDAELPFDWILDEVTGRDGSTTDYFLTEPVRCPRCGSSVIEKTLVEADGGVFSL
Ga0306925_114598661	3300031890	Soil	MDIHILAIGASTIRRAQEVIASCEACSQRAELPFDWILDEVTGRDGSTTDYFLTEPAQCPRCSSDIVEKTLVEADSG
Ga0310913_101948222	3300031945	Soil	MNIEIVALGTATIHRAQEVISSCEACNRDAELPFDWILDEVTGYSGSTTDYFLTEPARCPRCGGSIVEKTLVEPGGEVSAFNF
Ga0307471_1026904332	3300032180	Hardwood Forest Soil	VRSSESSISTDHTSMDFEVLALSTATIRRAQDAISSCESCNSEAEFPFDWVLDEVTGCDGSTTDYFLTEPAHCPRCGRSVVEKTHVEP
Ga0307471_1039588352	3300032180	Hardwood Forest Soil	MTLKLLALSASTIRRAQESISSCEACNTEAELPFDWVLDEITGCDGSNTDYFLTEPARCPRCGRSVIEKTLVEPHGGVFTL
Ga0373948_0076396_400_645	3300034817	Rhizosphere Soil	MDIHVLAIGASTIRRAQEAIASCEACSQRAELPFDWILDEVTGRSGSTTDYFLTELARCPRCGADIVEKTLVEADSGVLSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048653

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences