Metagenome / Metatranscriptome Family F048599

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048599
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	51 residues
Representative Sequence	MAQTIWIHKLTDAKKAEADGMDYICEHLFQALTQTGKLTKVKGWNP
Number of Associated Samples	128
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.27 %
% of genes near scaffold ends (potentially truncated)	94.59 %
% of genes from short scaffolds (< 2000 bps)	93.92 %
Associated GOLD sequencing projects	123
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.622 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.946 % of family members)
Environment Ontology (ENVO)	Unclassified (28.378 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.703 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.43% β-sheet: 0.00% Coil/Unstructured: 67.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF01243	Putative_PNPOx	2.03
PF13561	adh_short_C2	2.03
PF00596	Aldolase_II	1.35
PF03544	TonB_C	1.35
PF00270	DEAD	1.35
PF01757	Acyl_transf_3	1.35
PF01872	RibD_C	1.35
PF14684	Tricorn_C1	1.35
PF10067	DUF2306	0.68
PF08897	DUF1841	0.68
PF13181	TPR_8	0.68
PF02517	Rce1-like	0.68
PF14534	DUF4440	0.68
PF00480	ROK	0.68
PF00069	Pkinase	0.68
PF00753	Lactamase_B	0.68
PF13411	MerR_1	0.68
PF04073	tRNA_edit	0.68
PF00291	PALP	0.68
PF13442	Cytochrome_CBB3	0.68
PF04545	Sigma70_r4	0.68
PF04185	Phosphoesterase	0.68
PF00515	TPR_1	0.68
PF01408	GFO_IDH_MocA	0.68
PF04978	DUF664	0.68
PF00872	Transposase_mut	0.68
PF00271	Helicase_C	0.68
PF03473	MOSC	0.68
PF02371	Transposase_20	0.68
PF07238	PilZ	0.68
PF00665	rve	0.68
PF13620	CarboxypepD_reg	0.68
PF02631	RecX	0.68
PF08922	DUF1905	0.68
PF05721	PhyH	0.68
PF00092	VWA	0.68
PF04255	DUF433	0.68
PF00072	Response_reg	0.68
PF02585	PIG-L	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.70
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.35
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.35
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.35
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.35
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.68
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.68
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.68
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.68
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.68
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.68
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.68
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.68
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.68
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.68
COG2137	SOS response regulatory protein OraA/RecX, interacts with RecA	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.68
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.62 %
Unclassified	root	N/A	3.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.62 %
Unclassified	root	N/A	3.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.62 %
Unclassified	root	N/A	3.38 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	81.08 %
Unclassified	root	N/A	3.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.35 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	61.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.41 %
Unclassified	root	N/A	3.38 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.49 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.41 %
Unclassified	root	N/A	3.38 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.68 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.41 %
Unclassified	root	N/A	3.38 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.68 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.68 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.49 %
Unclassified	root	N/A	3.38 %
Paracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium	2.03 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.68 %
Komagataeibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter	0.68 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.68 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.49 %
Unclassified	root	N/A	3.38 %
Paracidobacterium acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	2.03 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.68 %
unclassified Rhodanobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter	0.68 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	0.68 %
Komagataeibacter oboediens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter oboediens	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.49 %
Unclassified	root	N/A	3.38 %
Paracidobacterium acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	2.03 %
Rhodanobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp.	0.68 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.68 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	0.68 %
Komagataeibacter oboediens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter oboediens	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10093326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300001867\|JGI12627J18819_10148724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	954	Open in IMG/M
3300002245\|JGIcombinedJ26739_100892309	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300002245\|JGIcombinedJ26739_101249637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300004082\|Ga0062384_100087953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1629	Open in IMG/M
3300004267\|Ga0066396_10073269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300005093\|Ga0062594_101036835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300005293\|Ga0065715_10043952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1261	Open in IMG/M
3300005330\|Ga0070690_100314092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300005332\|Ga0066388_102871173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300005332\|Ga0066388_107417728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005338\|Ga0068868_100192139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1698	Open in IMG/M
3300005340\|Ga0070689_101713033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300005434\|Ga0070709_11553794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300005437\|Ga0070710_11019542	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300005440\|Ga0070705_100123422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1676	Open in IMG/M
3300005467\|Ga0070706_101498645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300005542\|Ga0070732_10022759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3537	Open in IMG/M
3300005545\|Ga0070695_101108352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300005561\|Ga0066699_10519188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300005610\|Ga0070763_10865166	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006163\|Ga0070715_10636482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300006175\|Ga0070712_100956613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300006354\|Ga0075021_11064706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300006797\|Ga0066659_11877652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300006914\|Ga0075436_101216578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300007258\|Ga0099793_10667108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300007788\|Ga0099795_10458224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300009088\|Ga0099830_11036048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300009098\|Ga0105245_10738925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300009143\|Ga0099792_10315053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	933	Open in IMG/M
3300009143\|Ga0099792_11148208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300010043\|Ga0126380_11366852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300010046\|Ga0126384_11567606	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010048\|Ga0126373_10381078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1430	Open in IMG/M
3300010048\|Ga0126373_11498586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300010048\|Ga0126373_11539050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300010048\|Ga0126373_11776798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300010048\|Ga0126373_12333952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300010048\|Ga0126373_12407919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300010159\|Ga0099796_10565261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300010360\|Ga0126372_12161213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300010361\|Ga0126378_10314276	All Organisms → cellular organisms → Bacteria → Acidobacteria	1672	Open in IMG/M
3300010366\|Ga0126379_10740394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp.	1079	Open in IMG/M
3300010376\|Ga0126381_102767220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300010398\|Ga0126383_11943909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300011119\|Ga0105246_12144636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300011269\|Ga0137392_11430341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300011270\|Ga0137391_10412185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300011271\|Ga0137393_10932893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter → Komagataeibacter oboediens	740	Open in IMG/M
3300012189\|Ga0137388_11014082	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	765	Open in IMG/M
3300012202\|Ga0137363_10914325	All Organisms → cellular organisms → Bacteria → Acidobacteria	745	Open in IMG/M
3300012351\|Ga0137386_10002393	All Organisms → cellular organisms → Bacteria	12077	Open in IMG/M
3300012361\|Ga0137360_10274510	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300012361\|Ga0137360_11020415	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300012362\|Ga0137361_10030222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4279	Open in IMG/M
3300012363\|Ga0137390_10712272	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300012582\|Ga0137358_10232300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300012685\|Ga0137397_11045472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300012924\|Ga0137413_11472047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300012925\|Ga0137419_10987999	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012925\|Ga0137419_11056268	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012927\|Ga0137416_10482188	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300012957\|Ga0164303_10276452	Not Available	977	Open in IMG/M
3300012984\|Ga0164309_11407805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012986\|Ga0164304_11163966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300012989\|Ga0164305_11517149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300014968\|Ga0157379_10508922	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300015242\|Ga0137412_10333774	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300016270\|Ga0182036_10167682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300016294\|Ga0182041_10140086	All Organisms → cellular organisms → Bacteria → Acidobacteria	1849	Open in IMG/M
3300016445\|Ga0182038_10672269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300017823\|Ga0187818_10246378	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300017973\|Ga0187780_11262531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300017974\|Ga0187777_11470354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300017995\|Ga0187816_10284755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300018064\|Ga0187773_10240914	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300018085\|Ga0187772_10477904	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300018086\|Ga0187769_10144964	All Organisms → cellular organisms → Bacteria → Acidobacteria	1735	Open in IMG/M
3300020199\|Ga0179592_10195529	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300020579\|Ga0210407_10737612	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300020579\|Ga0210407_10880997	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300020580\|Ga0210403_10935818	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300020583\|Ga0210401_10009564	All Organisms → cellular organisms → Bacteria → Acidobacteria	9524	Open in IMG/M
3300020583\|Ga0210401_10183928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1946	Open in IMG/M
3300020583\|Ga0210401_11353586	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300021168\|Ga0210406_10293469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	1324	Open in IMG/M
3300021168\|Ga0210406_11124128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300021170\|Ga0210400_10510426	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300021170\|Ga0210400_11529183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300021171\|Ga0210405_10043954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	3545	Open in IMG/M
3300021180\|Ga0210396_10059158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3500	Open in IMG/M
3300021180\|Ga0210396_10251496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Paracidobacterium → Paracidobacterium acidisoli	1571	Open in IMG/M
3300021401\|Ga0210393_11167051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300021403\|Ga0210397_11042877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300021407\|Ga0210383_11164148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300021432\|Ga0210384_10246394	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300021432\|Ga0210384_10710769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300021432\|Ga0210384_11398938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300021474\|Ga0210390_11092013	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300021479\|Ga0210410_11133401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300021559\|Ga0210409_10066627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3355	Open in IMG/M
3300021560\|Ga0126371_11999237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300022525\|Ga0242656_1123500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300023259\|Ga0224551_1053001	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300024288\|Ga0179589_10553382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300025900\|Ga0207710_10109311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312	Open in IMG/M
3300025927\|Ga0207687_11603533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300025928\|Ga0207700_10054687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2998	Open in IMG/M
3300025930\|Ga0207701_11489960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300025936\|Ga0207670_11224195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300025938\|Ga0207704_10893465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300026281\|Ga0209863_10048105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300026499\|Ga0257181_1015609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300026984\|Ga0208732_1004845	Not Available	1038	Open in IMG/M
3300027610\|Ga0209528_1066706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300027645\|Ga0209117_1081356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300027787\|Ga0209074_10214019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300027857\|Ga0209166_10526360	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300027867\|Ga0209167_10287057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300027875\|Ga0209283_10973389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300027889\|Ga0209380_10127365	All Organisms → cellular organisms → Bacteria → Acidobacteria	1482	Open in IMG/M
3300027894\|Ga0209068_10857695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300029636\|Ga0222749_10365755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300031057\|Ga0170834_110976749	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031679\|Ga0318561_10320864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300031718\|Ga0307474_11256410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300031719\|Ga0306917_10806198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300031753\|Ga0307477_10464957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300031754\|Ga0307475_10844413	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300031820\|Ga0307473_11412045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031820\|Ga0307473_11566884	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031823\|Ga0307478_10092867	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300031833\|Ga0310917_10979810	Not Available	567	Open in IMG/M
3300031879\|Ga0306919_11268856	Not Available	558	Open in IMG/M
3300031941\|Ga0310912_10271331	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1309	Open in IMG/M
3300031946\|Ga0310910_11056491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300031954\|Ga0306926_11574214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300031962\|Ga0307479_10392254	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300031962\|Ga0307479_10975663	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300032001\|Ga0306922_12037761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300032052\|Ga0318506_10409719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300032059\|Ga0318533_11098390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300032174\|Ga0307470_10060412	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300032180\|Ga0307471_104027971	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300032205\|Ga0307472_101509406	Not Available	656	Open in IMG/M
3300032261\|Ga0306920_101396459	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300032892\|Ga0335081_10681313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.92%
Host-Associated	Host-Associated	6.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.54%
Plants	Host-Associated → Plants	6.08%
Aquatic	Environmental → Aquatic	3.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.05%
Freshwater	Environmental → Aquatic → Freshwater	2.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.03%
Sediment	Environmental → Aquatic → Sediment	1.35%
Peat	Environmental → Terrestrial → Peat	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.59%
Loam	Environmental → Terrestrial → Soil → Loam	15.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.35%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.03%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.35%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.35%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100933261	3300001545	Forest Soil	MAQTIWIHKLTDAKKADADGMSYICEHLFQALIQSGKLTKAKGWNPIPNASAKDGT
JGI12627J18819_101487242	3300001867	Forest Soil	MAQTIWIHKLPDAKKAEADGPDYICGHLFQALALSGKLTKVKG*
JGIcombinedJ26739_1008923091	3300002245	Forest Soil	MAQTIWIHKLTDAKKADADGMSYICEHLFQALIQSGKLTKAKGWNP
JGIcombinedJ26739_1012496372	3300002245	Forest Soil	MAQTIWIHRLADAKKAEADGMGYICEHLFQAFTLSGKLTKAKG
Ga0062384_1000879533	3300004082	Bog Forest Soil	MAQTIWIHKLADAKKAEADGMDYICEHLFQGLTQAGKLTKAKGWNPVPNASAKDGTTYRALFCDSCG
Ga0066396_100732692	3300004267	Tropical Forest Soil	MAQTIWIHRLSDAKKADADGMEYICEHLFQALTQAGKVTKAKGWNPFQNASAKDGTTY
Ga0062594_1010368352	3300005093	Soil	MAQTIWIHKLADAKKVEADGMDYICEHLFQGLTQAGKLTKAKGWNPLQNASAKDGTTYRALFC
Ga0065715_100439521	3300005293	Miscanthus Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWN
Ga0070690_1003140925	3300005330	Switchgrass Rhizosphere	HKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKDGTPYRAHVCAEYPKRPTES*
Ga0066388_1028711731	3300005332	Tropical Forest Soil	MAQTIWIHRLSDAKKADADGMEYICEHLFQALTQAGKLTKAKGWNPFQN
Ga0066388_1074177282	3300005332	Tropical Forest Soil	MAQTIWIHKLTDTKKAEADGMDYICQHLFQALTQTGKLTKEKGWNALE
Ga0068868_1001921391	3300005338	Miscanthus Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKDGTPYRAHVCAEYPKRPTES*
Ga0070689_1017130331	3300005340	Switchgrass Rhizosphere	MAQTIWIHKLADAKKVEADGMDYICEHLFQGLTQAGKLTKAKGWNPLQNASAKDGTTYRA
Ga0070709_115537941	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTIWIHKLTNAQKAGADGMEYICEHLFQAFTDTGKLTKVKGWNPVENA
Ga0070710_110195421	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTIWIHKLADAKKAEADGMDYICEHLFQGLNQSGKLTKAKGWNPLPDATAKDG
Ga0070705_1001234221	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKDGTPYRA
Ga0070706_1014986451	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTIWIHKLSDPKKKAEADGMDYICEHLFKGLTQSGKLTRVNGWNPFDNATSKDGATYRALFCDSC
Ga0070732_100227594	3300005542	Surface Soil	MAQTIWIHKLADAKKRDADGMDYICEHLFQASTQTGKLTKIEGWNPFQNATAKDGTTYRALFCDS
Ga0070695_1011083521	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKDG
Ga0066699_105191883	3300005561	Soil	MAQTIWIHKLGDAQKSQADGMEYICEHLFQGLTQSGKL
Ga0070763_108651662	3300005610	Soil	MAQTIWIHKLADAKKAEADGMDYICQHLFQGLTQAGKLTKAKGWNPLQ
Ga0070715_106364821	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTIWIHRLADAKKKEADGMEYICEHLFQALTQSGKLTNAKGWNAEPNASTKDGSTYRS
Ga0070712_1009566132	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEAT
Ga0075021_110647062	3300006354	Watersheds	MAQTIWIHKLTDAKKAEADGMDYICEHLFQALTQTGKLTKVKGWNP
Ga0066659_118776522	3300006797	Soil	MAQTIWIHKLADAKKAEADGMDYICEHLFQGLTQAGKLSKAKGWNSL
Ga0075436_1012165781	3300006914	Populus Rhizosphere	MAQTIWIHKLTEAGKIIEADGMDYICEHLFQALTQTGKLTKAKGWNLFQNASAKDGKTYRALF
Ga0099793_106671081	3300007258	Vadose Zone Soil	MAQTIWIHKLADAKKADADGMDYICEHLFQALTQSGKLTKAKGWNPLPNATAKDGSPYR
Ga0099795_104582242	3300007788	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQSGKLTNTKGWNPF
Ga0099830_110360482	3300009088	Vadose Zone Soil	MAQTIWIHRLTDAKKAEADGMDYICEHLFQALTQGG
Ga0105245_107389251	3300009098	Miscanthus Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKDGTPYRAHVCAEY
Ga0099792_103150531	3300009143	Vadose Zone Soil	MAQTIWIHKLTGRAKAEADGMDYICEHLFQALTQSGKLTKD
Ga0099792_111482082	3300009143	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQSGKLTNAKGWNPFDSASTKEGNS
Ga0126380_113668521	3300010043	Tropical Forest Soil	MAQTIWIHKLADAKKREADGMDYICEHLFQALTQTGKLTKIE
Ga0126384_115676061	3300010046	Tropical Forest Soil	MAQTIWIHRLSDAKKADTDGMEYICEHLFQALTQTGQLTKAKGFNPFQNASAK
Ga0126373_103810784	3300010048	Tropical Forest Soil	MAQTIWIHKLAGEKKTEADGMDYICEHLFQALTQTGKL
Ga0126373_114985862	3300010048	Tropical Forest Soil	MAQTIWIHRLSDAKKADADGMEYICEHLFKVLTEAGKLTKAKGWNPFQNVSAKDGTTYRA
Ga0126373_115390502	3300010048	Tropical Forest Soil	MAQTIWIHKLADAKKVEAQGMEYICEHLFQALTSTSKLTKEKGWNPFP
Ga0126373_117767982	3300010048	Tropical Forest Soil	MAQTIWIHKLTDTKKTEADGMHYICQHLFQALTQTGKLTKEKGWNVLEDARAKDGTCYR
Ga0126373_123339521	3300010048	Tropical Forest Soil	MAQTIWIHKLPDTKKVEADGMDYICQHLFQALTQTGKLTKEKG
Ga0126373_124079191	3300010048	Tropical Forest Soil	MAQTIWIHKLIDAKKKEADGMDYICEHLFQAFTQTGELTKVNGWNPFPKASAKDGT
Ga0099796_105652612	3300010159	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQSGKLTNAKGWNPFDSASTKEG
Ga0126372_121612131	3300010360	Tropical Forest Soil	MAQTIWIHKLSDAKKAEADGMEYICEHLFQALTQSGKLTKVKG*
Ga0126378_103142762	3300010361	Tropical Forest Soil	MAQTIWIHKLIDAKKKEADGMDYICEHLFQAFTQTGELTKV
Ga0126379_107403942	3300010366	Tropical Forest Soil	MAQTIWIHKLADAKKVEAQGMEYICEHLFQALTSTSKLTKEKGWNPFPDASAKDG
Ga0126381_1027672201	3300010376	Tropical Forest Soil	MAQTIWIHRLSDAKKADADGMEYICEHLFQALTQAGKL
Ga0126383_119439091	3300010398	Tropical Forest Soil	MAQTIWIHRLSDAKKADAGGMEYICEHLFQALTQAGKLTQAKGWNPF
Ga0105246_121446361	3300011119	Miscanthus Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKDGTPYRAHVCAEYPKRPTESYPS*
Ga0137392_114303411	3300011269	Vadose Zone Soil	MAQTIWIHKLADSKKADADGMDYICEHLFQALTQSGKLTKDKGWNPLQNASSKDGTNYRALFC
Ga0137391_104121851	3300011270	Vadose Zone Soil	MAQTIWIHKLTDAKKVEAGGMEYICEHLFQALTQTGKLTKEKGW
Ga0137393_109328932	3300011271	Vadose Zone Soil	MAQTIWIHKLSDAQKAQADGMEYICEHLFQALALAQTGKLTKVKGWNPL
Ga0137388_110140822	3300012189	Vadose Zone Soil	MAQTIWIHKLTDAKKAEADGMDYICEHLFQALTQSGKL
Ga0137363_109143253	3300012202	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQ
Ga0137386_100023938	3300012351	Vadose Zone Soil	MAQTIWIHKLSDAQKAQADGMDYICEHLFQTLTQTGKL
Ga0137360_102745101	3300012361	Vadose Zone Soil	MAQTIWIHKLTEAKKAEADGMDYICEHLFQALTQTGKLTKVKGWNPFENASAKDGTTYRALFC
Ga0137360_110204151	3300012361	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQSGKLTNAKGWNPFD
Ga0137361_100302228	3300012362	Vadose Zone Soil	MAQTIWIHRLTDAKKAEADGMDYICEHLFQALTQTGKLTKAKGWNPFPNASAKDGTTYRALFC
Ga0137390_107122723	3300012363	Vadose Zone Soil	MAQTIWIHKLTDAKKAEADGMDYICEHLFQALTRTGKLTKANGWNPLPDASAK
Ga0137358_102323002	3300012582	Vadose Zone Soil	MAQTIWIHKLTDAKKAEADGMDYICEHLFQALTQTGKLTKVKGWNPFQNASAK
Ga0137397_110454722	3300012685	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQSGKLTNAKGWNPFDSASTKE
Ga0137413_114720472	3300012924	Vadose Zone Soil	MAQTIWIHKLSDPKKKTEADGMDYICEHLFQGLTQSGKLTNAKGWNPFDSASTKEGNSYRALFCDACA
Ga0137419_109879992	3300012925	Vadose Zone Soil	MNWRNYMAQTIWIHKLTDAKKAEADGMDYICEHLFQALTQSGKLTKAKGWNPLQNASAKDGTAYRALF
Ga0137419_110562682	3300012925	Vadose Zone Soil	MAQTIWIHKLTEAKKAEADGMDYICEHLFQSLTQTGKLTKVKGW
Ga0137416_104821882	3300012927	Vadose Zone Soil	MAQTIWIHRLSDAKKAEADGMEYVCQHLFQGLTQSGKLTKAKGWN
Ga0164303_102764522	3300012957	Soil	MAQTIWVHKLTEGKKAEADGMDYICEHLFQALTQTGKLTKARGWNPLLDAAAKDG
Ga0164309_114078052	3300012984	Soil	MAQTIWIHKLADAQKAGADGMEYICEHLFQGVTQTGKLTKVKGWNPSPNASAKDG
Ga0164304_111639661	3300012986	Soil	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKD
Ga0164305_115171491	3300012989	Soil	TIWIHKLTDAKKAEADGMDYICEHLFQALTQTGKLTKAKGWNPFQEATSKDGTPYRAHVCAEYPKRPTES*
Ga0157379_105089223	3300014968	Switchgrass Rhizosphere	MAQTIWIHKLADAKKVEADGMDYICEHLFQGLTQAGKLTKAKGWNPLQNA
Ga0137412_103337743	3300015242	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQSGKLTNAKGWN
Ga0182036_101676824	3300016270	Soil	MAQTIWLHRLPDSKKAEADGMAYICEHLFQALTQAGKLTKVNGWNPAP
Ga0182041_101400864	3300016294	Soil	MAQTIWLHRLPDSKKAEADGMAYICEHLFQALMQAGKLTKVNGWNPAPNATAKDGTTY
Ga0182038_106722692	3300016445	Soil	MAQTIWLHRLPDSKKAEADGMAYICEHLFQALTQAGKLTKVNGWNPAPNA
Ga0187818_102463782	3300017823	Freshwater Sediment	MAQTIWIHKLTEAKKVEADGMDYICEHLFQALTQSGKLTKVNG
Ga0187780_112625311	3300017973	Tropical Peatland	MAQTIWIHKLANAKKTEADGMDYICQHLFQALTQTGKLTKEKGWNIFEDANAKDGTSYRALFCD
Ga0187777_114703542	3300017974	Tropical Peatland	MAQTIWIHKLANAKKAEADGMDYICQHLFQALTQTGKLTKEKGWNILEDAIAKDGTSYR
Ga0187816_102847552	3300017995	Freshwater Sediment	MAQTIWIHKLTEAKKVEADGMDYVCEHLFQALTQSGKLTKVNGWNPLQ
Ga0187773_102409142	3300018064	Tropical Peatland	MAQTIWIHKLAEAKKRDADGMDYVCEHLFQAATPTGKLTKMKGWNPFQNATAKDGTTYRALFCDSC
Ga0187772_104779042	3300018085	Tropical Peatland	MAQTIWIHKLADAKKREADGMDYICEHLFQASTQTGKLTKIEGWNPF
Ga0187769_101449642	3300018086	Tropical Peatland	MAQTIWIHKLADSKKAEADGMDYICQHLFQAFTQTGKLTKTNGWNTFENACAKDGTSYRALFCD
Ga0179592_101955294	3300020199	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQSGKLTNAKGWNPFDSASTKEGN
Ga0210407_107376121	3300020579	Soil	MAQTIWIHKLADAKKADADGMDYICEHLFQALTQSGKLTKARGWNPLPNASAKDGTTYRALFC
Ga0210407_108809971	3300020579	Soil	MAQTIWIHKLADAKKAETDGMEYICEHLFQALTDRGKLTK
Ga0210403_109358181	3300020580	Soil	MAQTIWIHKLADAKKADADGMDYICEHLFQALTQSGKLTKAKGWNPLPNATAKDGT
Ga0210401_1000956412	3300020583	Soil	MAQTIWIHKLPDAKKAEAAGPDYICEHLFQALAQSGKLTKVKG
Ga0210401_101839282	3300020583	Soil	MAQTIWIHKLADAKKVEADGMDYICEHLFQGLTQAG
Ga0210401_113535861	3300020583	Soil	MAQTIWIHKLADAKKAETDGMEYICEHLFQALTDRGK
Ga0210406_102934691	3300021168	Soil	MAQTIWIHKLANAKKADADGMDYICEHLFQALTQSGKLTKAKGWNPLPNA
Ga0210406_111241281	3300021168	Soil	MAQTIWVHKLADAQKKDADGMEYICEHLFQGLTQSGKLTKVKGWN
Ga0210400_105104261	3300021170	Soil	MAQTIWIHKLANTKKAEADGMEYICEHLFQALTDRGKLTKEKGWNPVPN
Ga0210400_115291831	3300021170	Soil	MAQTIWIHKLANAKKADADGMDYICEHLFQALTQSGKLTKAKGWNPLP
Ga0210405_100439543	3300021171	Soil	MAQTIWIHKLPDAKKAEADGPDYICEHLFQALAQSGKLTKVKG
Ga0210396_100591588	3300021180	Soil	MAQTIWIHKLPDAKKAEADGPDYICGHLFQALAQSGKLTKVKG
Ga0210396_102514962	3300021180	Soil	KLPDAKKAEADGPDYICGHLFQALAQSGKLTKVKG
Ga0210393_111670512	3300021401	Soil	MAQTIWIHKLADAKKVEADGMDYICEHLFQGLTQSGKLTKAKG
Ga0210397_110428771	3300021403	Soil	MAQTIWIHKLADAQKAQADGMEYVCEHLFQAMTQSGKLTKAKGWNPLPNASAKDG
Ga0210383_111641482	3300021407	Soil	MAQTIWIHKLADAKKVEADGMDYICEHLFQGLTQAGKLTKAKG
Ga0210384_102463943	3300021432	Soil	MAQTIWIHKLSDAKKAEADGMDYICEHLFQALSQTGKLNKAKGWN
Ga0210384_107107692	3300021432	Soil	MAQTIWIHKLADAQKAEADGMDYICEHLFQGVTQTGKLTKAK
Ga0210384_113989381	3300021432	Soil	MAQTIWIHRLTDAKKAEADGMEYICDHLFKGLTQSGKLTKTNGWNPFPDASAKDGTTY
Ga0210390_110920131	3300021474	Soil	MAQTIWIHKLASTKKAEADGMEYICEHLFQALTDRGKLTKEKGWNPVPNASS
Ga0210410_111334011	3300021479	Soil	MAQTIWVHKLADAQKKDADGMEYICEHLFQGMQAGKLTKVKGWN
Ga0210409_100666271	3300021559	Soil	MAQTIWIHKLADAKKPEADGMDYVCEHLFQALSQAGKLTKAKGWNPSPNASAKDGTTYRALFCDS
Ga0126371_119992371	3300021560	Tropical Forest Soil	MAQTIWIHKLPDTKKVEADGMDYICQHLFQALTQTGKLTKEKGWNALEHASAKDGTCYRALFCDSC
Ga0242656_11235001	3300022525	Soil	MAQTIWIHKLANTKKAEADGMEYICEHLFQALTDRGKLTTIGK
Ga0224551_10530012	3300023259	Soil	MAQTIWIHKLADAKKVEADGMDYICEHLFQGLTQAGKLTKA
Ga0179589_105533822	3300024288	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQSGKLTNAKGWNPFDSASTKEGNTYR
Ga0207710_101093113	3300025900	Switchgrass Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKDGTPYRAHVCAEYPKRPTES
Ga0207687_116035331	3300025927	Miscanthus Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKDGTPYRAHVCA
Ga0207700_100546876	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTIWLHRLNDANRSQADGMEYICVHLFQGLTQSH
Ga0207701_114899601	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTIWLHKLAEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPF
Ga0207670_112241952	3300025936	Switchgrass Rhizosphere	MAQTIWIHKLADAKKVEADGMDYICEHLFQGLTQAGKLTKAKGWNPLQNASAKDGTTYRALF
Ga0207704_108934653	3300025938	Miscanthus Rhizosphere	RATGAAIKKAAPRDLEAKKAEADGMDYICEHPFQASAQTGKLTKAKGWNPFQEATSKDGTPYRAHVCAEYPKRPTES
Ga0209863_100481052	3300026281	Prmafrost Soil	MAQTIWIHKLTAAKKAEADGMDYICEHLFQSLTQSGQLTKVKGWNPFPDASTKDGTTYRALFCDSCG
Ga0257181_10156093	3300026499	Soil	MAQTIWIHKLADAKKADADGMDYICEHLFQALTQSGKLTKAKGWNPLPNASAKDGTTYRALF
Ga0208732_10048452	3300026984	Forest Soil	MAQTIWIHKLTDAKKAEADGMDYICEHLFQGLTQSGKLTKVKGWNPF
Ga0209528_10667061	3300027610	Forest Soil	MAQTIWIHKLTDAKKADADGMSYICEHLFQALIQSGKLTKAKGWNALPNA
Ga0209117_10813561	3300027645	Forest Soil	MAQTIWIHKLADAKKAGADGMDYICEHLFQALTHGGKLTK
Ga0209074_102140192	3300027787	Agricultural Soil	MAQTIWIHKLAATQKAQSDGMEYICEHLFQALTQSGKLSKAKGWNPQPNATAKDGATYRALF
Ga0209166_105263601	3300027857	Surface Soil	MAQTIWIHKLASTKKAEADGMEYICEHLFQALTDRGKLTKEKGWN
Ga0209167_102870572	3300027867	Surface Soil	MAQTIWIHKLTDAKKAEADGMDYICEHLFQALTQSGKLTKVKGWNPL
Ga0209283_109733892	3300027875	Vadose Zone Soil	MAQTIWIHKLSDPKKKAEADGMDYICEHLFQGLTQSGKLTKVNG
Ga0209380_101273651	3300027889	Soil	MAQTIWIHKLASTKKAEADGMEYICEHLFQALTDRGKLTK
Ga0209068_108576951	3300027894	Watersheds	MAQTIWIHKLTEAKKAEADGMDYICEHLFQALTQTGKLTKVKGWN
Ga0222749_103657552	3300029636	Soil	MAQTIWIHKLADAKKADADGMSYICEHLFQALIQSGKLTKAKGWNPSPNATAKDGTIY
Ga0170834_1109767491	3300031057	Forest Soil	MAQTIWIHKLADAKKADADGMDYICEHLFQALTQSGKLTK
Ga0318561_103208641	3300031679	Soil	MAQTIWIHKLTDTKKAEADGMDYICQHLFQALTQTGKLTKEKGWNALEHASAKDGTCY
Ga0307474_112564101	3300031718	Hardwood Forest Soil	MAQTIWIHKLSSAKKAEADGMDYICEHLFQALAQSGKLTKAKGWNPFENAGAKDGSTYRALFCDSCG
Ga0306917_108061981	3300031719	Soil	MAQTIWIHKLTDTKKAEADGMDYICQHLFQALTQTGKLT
Ga0307477_104649571	3300031753	Hardwood Forest Soil	MAQTIWIHKLSDAKKREADGMDYICEHLFQAFTQTGKLSKTQGWNPLQNASAKDGTTYRALFCDLC
Ga0307475_108444132	3300031754	Hardwood Forest Soil	MAQTIWIHKLSDAKKAEADGMDYICEHLFQALSQTGKLTKAKGWNPLPNASAKDGT
Ga0307473_114120452	3300031820	Hardwood Forest Soil	MAQTIWIHKLTDAKRAEADGMEYICEHLFQAFEQAGKLTKAKGWNLVPDASAKDGTEYRAVFCD
Ga0307473_115668842	3300031820	Hardwood Forest Soil	MAQTIWIHKLTDAKKAEADGMDYICEHLFQALTQSSKL
Ga0307478_100928671	3300031823	Hardwood Forest Soil	MAQTIWIHKLADAKKVEADGMDYICEHLFQGLTQAGKLTKAKGWNPLQNASAKDGTTYR
Ga0310917_109798102	3300031833	Soil	MAQTIWIHKLANAKKAEADGMDYICQHLFQALTLTGKLT
Ga0306919_112688561	3300031879	Soil	MAQTIWIHKLANAKKAEADGMDYICQHLFQALTQTGKLTKE
Ga0310912_102713313	3300031941	Soil	MAQTIWIHRLSDTKKADADGMEYICEHLFQVLTQAGKLTKAKGWNPFQNASAKDGTTYRALF
Ga0310910_110564912	3300031946	Soil	MAQTIWIHKLANAKRAEADGMDYICQHLFQALTQTGKLTKEKGWNIFEDASAKDGTSYRALFCDSC
Ga0306926_115742141	3300031954	Soil	MAQTIWLHRLPDSKKAEADGMEYICEHLFQALTQAGKLTKVNGWNPAPNATAKDGTTYPALFC
Ga0307479_103922543	3300031962	Hardwood Forest Soil	MAQTIWIHRLNNPKKGEADGMEYICEHLFQELTHGGKLTKV
Ga0307479_109756631	3300031962	Hardwood Forest Soil	MAQTIWIHKLADAKKPEADGMDYVCEHLFQALTQAGKLTKVKGWNPSPNASAKD
Ga0306922_120377611	3300032001	Soil	MAQTIWLHRLPDSKKAEADGMEYICEHLFQALTQAGKLTKVNGWN
Ga0318506_104097191	3300032052	Soil	MAQTIWIHKLANAKKAEADGMDYICQHLFQALTLTGKLTKEKGWNIFEDASAKDGTSYRALFC
Ga0318533_110983901	3300032059	Soil	MAQTIWLHRLPDSKKAEADGMAYICEHLFQALTQAGK
Ga0307470_100604121	3300032174	Hardwood Forest Soil	MAQTIWIHKLADAKKADADGMDYICEHLFQALTQS
Ga0307471_1040279711	3300032180	Hardwood Forest Soil	MAQTIWIHRLSDAKKAEADGMEYICEHLFQSLTQSGKLTKAKGW
Ga0307472_1015094061	3300032205	Hardwood Forest Soil	MAQTIWIHKLTEAKKAEADGMDYICEHLFQALTQSGKLTK
Ga0306920_1013964591	3300032261	Soil	MAQTIWLHRLPDSKKAEADGMEYICEHLFQALTQSGKLAKV
Ga0335081_106813131	3300032892	Soil	MAQTIWIHKLGEKHKAEAEGMEYICEHLFQALEQSGKLSKAKGWNPMPNASSKEGGSYRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048599

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences