Metagenome / Metatranscriptome Family F048596

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048596
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	55 residues
Representative Sequence	MSYQAITIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF
Number of Associated Samples	117
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.43 %
% of genes near scaffold ends (potentially truncated)	36.49 %
% of genes from short scaffolds (< 2000 bps)	95.95 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.919 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.540 % of family members)
Environment Ontology (ENVO)	Unclassified (32.432 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.027 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 83.64% β-sheet: 0.00% Coil/Unstructured: 16.36%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF07043	DUF1328	32.43
PF14248	DUF4345	2.70
PF00011	HSP20	2.03
PF00248	Aldo_ket_red	1.35
PF06844	DUF1244	1.35
PF02771	Acyl-CoA_dh_N	0.68
PF00441	Acyl-CoA_dh_1	0.68
PF07486	Hydrolase_2	0.68
PF05239	PRC	0.68
PF13360	PQQ_2	0.68
PF02464	CinA	0.68
PF13560	HTH_31	0.68
PF06319	MmcB-like	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	32.43
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	2.03
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.35
COG3492	Uncharacterized conserved protein, DUF1244 family	Function unknown [S]	1.35
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	0.68
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.68
COG5321	Uncharacterized conserved protein	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
All Organisms	root	All Organisms	31.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
cellular organisms	root	All Organisms → cellular organisms	31.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.19 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.14 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	1.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.38 %
Alteromonadales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadales genera incertae sedis	1.35 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.35 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.35 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.68 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.68 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
Motilimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadales genera incertae sedis → Motilimonas	1.35 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.35 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.35 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.68 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.68 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.68 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
Motilimonas pumila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadales genera incertae sedis → Motilimonas → Motilimonas pumila	1.35 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1.35 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.35 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.68 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.68 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.68 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.92 %
Motilimonas pumila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadales genera incertae sedis → Motilimonas → Motilimonas pumila	1.35 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1.35 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.35 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.68 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.68 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.68 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17484358	Not Available	1163	Open in IMG/M
2088090015\|GPICI_8683957	Not Available	1749	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1046288	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1043071	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300000955\|JGI1027J12803_101955213	Not Available	1521	Open in IMG/M
3300001139\|JGI10220J13317_11671655	Not Available	561	Open in IMG/M
3300004114\|Ga0062593_101795208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	674	Open in IMG/M
3300004157\|Ga0062590_100769779	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300004463\|Ga0063356_101782885	Not Available	924	Open in IMG/M
3300004463\|Ga0063356_104172089	Not Available	622	Open in IMG/M
3300004480\|Ga0062592_101092886	Not Available	737	Open in IMG/M
3300004480\|Ga0062592_101170247	Not Available	717	Open in IMG/M
3300004480\|Ga0062592_101895853	Not Available	586	Open in IMG/M
3300004480\|Ga0062592_102147286	Not Available	555	Open in IMG/M
3300004643\|Ga0062591_101033476	Not Available	785	Open in IMG/M
3300004801\|Ga0058860_11995321	Not Available	545	Open in IMG/M
3300005093\|Ga0062594_100267646	All Organisms → cellular organisms → Bacteria → Proteobacteria	1268	Open in IMG/M
3300005330\|Ga0070690_100747372	Not Available	755	Open in IMG/M
3300005330\|Ga0070690_101244244	Not Available	595	Open in IMG/M
3300005331\|Ga0070670_101143416	Not Available	710	Open in IMG/M
3300005332\|Ga0066388_106200879	Not Available	603	Open in IMG/M
3300005335\|Ga0070666_10755574	Not Available	715	Open in IMG/M
3300005336\|Ga0070680_100973911	Not Available	732	Open in IMG/M
3300005339\|Ga0070660_100363039	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300005340\|Ga0070689_100900182	Not Available	783	Open in IMG/M
3300005354\|Ga0070675_101447584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	633	Open in IMG/M
3300005364\|Ga0070673_100627785	Not Available	982	Open in IMG/M
3300005366\|Ga0070659_101988262	Not Available	522	Open in IMG/M
3300005435\|Ga0070714_100826462	Not Available	898	Open in IMG/M
3300005436\|Ga0070713_102260082	Not Available	527	Open in IMG/M
3300005437\|Ga0070710_10716938	Not Available	707	Open in IMG/M
3300005438\|Ga0070701_11180915	Not Available	542	Open in IMG/M
3300005439\|Ga0070711_100652140	Not Available	883	Open in IMG/M
3300005458\|Ga0070681_11307795	Not Available	648	Open in IMG/M
3300005466\|Ga0070685_11615495	Not Available	502	Open in IMG/M
3300005539\|Ga0068853_102184423	Not Available	537	Open in IMG/M
3300005545\|Ga0070695_100638085	Not Available	840	Open in IMG/M
3300005547\|Ga0070693_101586391	Not Available	514	Open in IMG/M
3300005614\|Ga0068856_102496780	Not Available	523	Open in IMG/M
3300005713\|Ga0066905_100006356	All Organisms → cellular organisms → Bacteria	5132	Open in IMG/M
3300005764\|Ga0066903_103198157	All Organisms → cellular organisms → Bacteria → Proteobacteria	886	Open in IMG/M
3300005764\|Ga0066903_103913238	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005764\|Ga0066903_106106144	Not Available	630	Open in IMG/M
3300005843\|Ga0068860_102307023	Not Available	559	Open in IMG/M
3300006163\|Ga0070715_10794831	Not Available	574	Open in IMG/M
3300006175\|Ga0070712_101128985	Not Available	681	Open in IMG/M
3300006358\|Ga0068871_101051363	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300006845\|Ga0075421_100442006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1555	Open in IMG/M
3300006903\|Ga0075426_10599799	Not Available	822	Open in IMG/M
3300009093\|Ga0105240_12454629	Not Available	539	Open in IMG/M
3300009098\|Ga0105245_12810486	Not Available	539	Open in IMG/M
3300009100\|Ga0075418_10615593	Not Available	1169	Open in IMG/M
3300009101\|Ga0105247_10469160	Not Available	911	Open in IMG/M
3300009174\|Ga0105241_11037089	Not Available	769	Open in IMG/M
3300009176\|Ga0105242_12085966	Not Available	610	Open in IMG/M
3300009545\|Ga0105237_11564747	Not Available	666	Open in IMG/M
3300009551\|Ga0105238_11713120	Not Available	660	Open in IMG/M
3300009553\|Ga0105249_10619610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1138	Open in IMG/M
3300009792\|Ga0126374_10028576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2577	Open in IMG/M
3300009792\|Ga0126374_10410633	Not Available	949	Open in IMG/M
3300010046\|Ga0126384_10028087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3708	Open in IMG/M
3300010046\|Ga0126384_10772949	Not Available	857	Open in IMG/M
3300010047\|Ga0126382_10299985	Not Available	1206	Open in IMG/M
3300010358\|Ga0126370_10003954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7261	Open in IMG/M
3300010358\|Ga0126370_12293256	Not Available	534	Open in IMG/M
3300010373\|Ga0134128_10550334	Not Available	1286	Open in IMG/M
3300010376\|Ga0126381_100662699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1490	Open in IMG/M
3300010396\|Ga0134126_11247231	Not Available	825	Open in IMG/M
3300010396\|Ga0134126_12206125	Not Available	601	Open in IMG/M
3300010397\|Ga0134124_11527598	Not Available	696	Open in IMG/M
3300010398\|Ga0126383_11982655	Not Available	670	Open in IMG/M
3300011119\|Ga0105246_11723195	Not Available	596	Open in IMG/M
3300012884\|Ga0157300_1005686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1364	Open in IMG/M
3300012884\|Ga0157300_1083461	Not Available	563	Open in IMG/M
3300012892\|Ga0157294_10018736	Not Available	1321	Open in IMG/M
3300012897\|Ga0157285_10058821	Not Available	960	Open in IMG/M
3300012903\|Ga0157289_10109314	Not Available	802	Open in IMG/M
3300012905\|Ga0157296_10257245	Not Available	589	Open in IMG/M
3300012906\|Ga0157295_10141601	Not Available	711	Open in IMG/M
3300012908\|Ga0157286_10110175	Not Available	823	Open in IMG/M
3300012910\|Ga0157308_10234879	Not Available	638	Open in IMG/M
3300012913\|Ga0157298_10298162	Not Available	570	Open in IMG/M
3300012914\|Ga0157297_10169803	Not Available	728	Open in IMG/M
3300012914\|Ga0157297_10396639	Not Available	551	Open in IMG/M
3300012915\|Ga0157302_10466008	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300012916\|Ga0157310_10480736	Not Available	536	Open in IMG/M
3300012960\|Ga0164301_11768510	Not Available	518	Open in IMG/M
3300012971\|Ga0126369_10478331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1300	Open in IMG/M
3300012971\|Ga0126369_10578534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1191	Open in IMG/M
3300013100\|Ga0157373_11010849	Not Available	621	Open in IMG/M
3300013104\|Ga0157370_11684153	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300013105\|Ga0157369_10794150	Not Available	973	Open in IMG/M
3300013296\|Ga0157374_12313607	Not Available	565	Open in IMG/M
3300013297\|Ga0157378_11876374	Not Available	648	Open in IMG/M
3300013297\|Ga0157378_11965056	Not Available	634	Open in IMG/M
3300013306\|Ga0163162_12987152	Not Available	544	Open in IMG/M
3300013306\|Ga0163162_13401904	Not Available	508	Open in IMG/M
3300014745\|Ga0157377_10345876	Not Available	996	Open in IMG/M
3300014968\|Ga0157379_10130700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2260	Open in IMG/M
3300014969\|Ga0157376_12741592	Not Available	533	Open in IMG/M
3300015371\|Ga0132258_10896592	All Organisms → cellular organisms → Bacteria	2239	Open in IMG/M
3300015371\|Ga0132258_12857583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1201	Open in IMG/M
3300015372\|Ga0132256_100817530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1048	Open in IMG/M
3300015372\|Ga0132256_100857583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300015373\|Ga0132257_101494087	All Organisms → cellular organisms → Bacteria → Proteobacteria	862	Open in IMG/M
3300015374\|Ga0132255_102698295	Not Available	759	Open in IMG/M
3300015374\|Ga0132255_103052524	Not Available	714	Open in IMG/M
3300015374\|Ga0132255_104409615	Not Available	597	Open in IMG/M
3300016371\|Ga0182034_11472996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadales genera incertae sedis → Motilimonas → Motilimonas pumila	596	Open in IMG/M
3300016387\|Ga0182040_10278646	Not Available	1269	Open in IMG/M
3300017792\|Ga0163161_10713741	Not Available	836	Open in IMG/M
3300017792\|Ga0163161_11445014	Not Available	602	Open in IMG/M
3300019356\|Ga0173481_10024249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1881	Open in IMG/M
3300019356\|Ga0173481_10128103	Not Available	1017	Open in IMG/M
3300019356\|Ga0173481_10217858	Not Available	839	Open in IMG/M
3300019356\|Ga0173481_10885704	Not Available	502	Open in IMG/M
3300019361\|Ga0173482_10027657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1682	Open in IMG/M
3300019361\|Ga0173482_10076199	All Organisms → cellular organisms → Bacteria → Proteobacteria	1161	Open in IMG/M
3300019361\|Ga0173482_10378398	Not Available	651	Open in IMG/M
3300019362\|Ga0173479_10514710	Not Available	607	Open in IMG/M
3300020610\|Ga0154015_1338088	Not Available	532	Open in IMG/M
3300021560\|Ga0126371_10341049	All Organisms → cellular organisms → Bacteria → Proteobacteria	1632	Open in IMG/M
3300021560\|Ga0126371_10450169	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300021560\|Ga0126371_10916402	Not Available	1020	Open in IMG/M
3300021560\|Ga0126371_11090983	Not Available	938	Open in IMG/M
3300021560\|Ga0126371_11104606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	932	Open in IMG/M
3300022899\|Ga0247795_1064696	Not Available	626	Open in IMG/M
3300023069\|Ga0247751_1087902	Not Available	551	Open in IMG/M
3300025905\|Ga0207685_10326871	Not Available	766	Open in IMG/M
3300025915\|Ga0207693_10168119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1727	Open in IMG/M
3300025915\|Ga0207693_10813784	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300025919\|Ga0207657_10535270	Not Available	916	Open in IMG/M
3300025926\|Ga0207659_11215706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	648	Open in IMG/M
3300025929\|Ga0207664_10335645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1336	Open in IMG/M
3300025936\|Ga0207670_11055181	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300025949\|Ga0207667_11098926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300025981\|Ga0207640_10834868	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300025986\|Ga0207658_11077775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	734	Open in IMG/M
3300026023\|Ga0207677_11378558	Not Available	649	Open in IMG/M
3300026041\|Ga0207639_12079240	Not Available	529	Open in IMG/M
3300026116\|Ga0207674_11653371	Not Available	609	Open in IMG/M
3300028379\|Ga0268266_10375110	Not Available	1341	Open in IMG/M
3300028380\|Ga0268265_11722127	Not Available	633	Open in IMG/M
3300031682\|Ga0318560_10527172	Not Available	640	Open in IMG/M
3300031744\|Ga0306918_10539292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	914	Open in IMG/M
3300031879\|Ga0306919_10618866	Not Available	835	Open in IMG/M
3300031945\|Ga0310913_10989769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadales genera incertae sedis → Motilimonas → Motilimonas pumila	590	Open in IMG/M
3300033289\|Ga0310914_10401980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	1240	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.16%
Host-Associated	Host-Associated	37.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.16%
Plants	Host-Associated → Plants	37.16%
Human	Host-Associated → Human	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.19%
Digestive System	Host-Associated → Human → Digestive System	0.68%
Roots	Host-Associated → Plants → Roots	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.27%
Loam	Environmental → Terrestrial → Soil → Loam	16.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.05%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.41%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.38%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.35%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.35%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.35%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01516340	2088090014	Soil	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF
GPICI_00228150	2088090015	Soil	MSYQAVTIVLALALLLSGVAQQVDNDLNEALGIKNTPLLQLIVGIGTGLLILKSF
AP72_2010_repI_A01DRAFT_10462881	3300000579	Forest Soil	MSTHAVIIVLALALLLSGVAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF*
AP72_2010_repI_A10DRAFT_10430711	3300000651	Forest Soil	MSTHAVIXVLALALLLSGVAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF*
JGI1027J12803_1019552131	3300000955	Soil	VAEQADNDLNEALGIKHTPLLQFIVGIGTGLLIWKSF*
JGI10220J13317_116716552	3300001139	Soil	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIG
Ga0062593_1017952081	3300004114	Soil	LLSGVAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF*
Ga0062590_1007697792	3300004157	Soil	MMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLILKSF*
Ga0063356_1017828854	3300004463	Arabidopsis Thaliana Rhizosphere	MFALFRPQNQLVIIWRYWLSPDQVIIMTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTG
Ga0063356_1041720892	3300004463	Arabidopsis Thaliana Rhizosphere	MSYQAFTIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGILIWKSF*
Ga0062592_1010928862	3300004480	Soil	MAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLILKSF*
Ga0062592_1011702472	3300004480	Soil	MFALFRPQNQLVIIWRYWLSPDQVIIMTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0062592_1018958531	3300004480	Soil	MSAIMSYQAFTIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLIWKSF*
Ga0062592_1021472862	3300004480	Soil	MKGAIMSTHAVIIVLALALLLSGVAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF
Ga0062591_1010334762	3300004643	Soil	TIVLALALLLSGVAQQADNDLNEALGLKNTPLLQMIVGIGTGLLILKSF*
Ga0058860_119953211	3300004801	Host-Associated	PDQVIIMTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0062594_1002676461	3300005093	Soil	MSYQAFTIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLIWKSF*
Ga0070690_1007473722	3300005330	Switchgrass Rhizosphere	MTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0070690_1012442441	3300005330	Switchgrass Rhizosphere	MMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF*
Ga0070670_1011434161	3300005331	Switchgrass Rhizosphere	MSYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0066388_1062008791	3300005332	Tropical Forest Soil	MSTHVVIIILALALLLSGIAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF*
Ga0070666_107555742	3300005335	Switchgrass Rhizosphere	MSSIMSYQAFTIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLIWKSF*
Ga0070680_1009739112	3300005336	Corn Rhizosphere	LSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0070660_1003630392	3300005339	Corn Rhizosphere	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0070689_1009001822	3300005340	Switchgrass Rhizosphere	MSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF*
Ga0070675_1014475842	3300005354	Miscanthus Rhizosphere	FCLGWMMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLILKSF*
Ga0070673_1006277852	3300005364	Switchgrass Rhizosphere	LSPDQVIIMTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0070659_1019882621	3300005366	Corn Rhizosphere	MMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLI
Ga0070714_1008264621	3300005435	Agricultural Soil	VSYQAIIIVLALALLLSGVAEQADNDLNEALGIKDTPLLQFIVGIGTGLLIWKSF*
Ga0070713_1022600822	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLILKSF*
Ga0070710_107169381	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSYQAIIIVLALALLLSGVAEQADNDLNEALGIKDTPLLQFIVGIGTGLLIWKSF*
Ga0070701_111809152	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLIWKSF*
Ga0070711_1006521402	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSYQAVTIVLALALLLSGVAQQADNDLNEALGLKNTPLLQMIVGIGTGLLILKSF*
Ga0070681_113077951	3300005458	Corn Rhizosphere	ALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0070685_116154951	3300005466	Switchgrass Rhizosphere	LALALLLSGVAQQADNDLNEALGIKNTPLLQMIVGIGTGLLILKSF*
Ga0068853_1021844232	3300005539	Corn Rhizosphere	GAIMSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0070695_1006380852	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MMAIMSYHAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF*
Ga0070693_1015863911	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSYHAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF*
Ga0068856_1024967802	3300005614	Corn Rhizosphere	FCLGWMMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF*
Ga0066905_10000635611	3300005713	Tropical Forest Soil	MSTHAVITVLALALLLSGVAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF*
Ga0066903_1031981571	3300005764	Tropical Forest Soil	MSTHVVIIILALALLLSGIAEQADNDLNEALGIRNTPLLQLIVGIGTGLLILKSF*
Ga0066903_1039132381	3300005764	Tropical Forest Soil	MSTHVFNILALALLLSGVAEQADNDLDEHSEKDIPLLQFIVGIGTG
Ga0066903_1061061442	3300005764	Tropical Forest Soil	MSYQAIIIVLALALLLSGVAKQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF*
Ga0068860_1023070231	3300005843	Switchgrass Rhizosphere	MAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLIWKSF*
Ga0070715_107948312	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VSYQAIIIVLALALLLSGVAEQADSDLNEALGIKNTPLLQFIVGIGTGLLIWKSF*
Ga0070712_1011289851	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ALALLLSGVAEQADNDLNEALGFKDTPLLQLIVGIGTGLLIWKSF*
Ga0068871_1010513631	3300006358	Miscanthus Rhizosphere	MAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF*
Ga0075421_1004420064	3300006845	Populus Rhizosphere	WSSSVVFCLGWMMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLILKSF*
Ga0075426_105997993	3300006903	Populus Rhizosphere	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGIGLLILKSF*
Ga0105240_124546291	3300009093	Corn Rhizosphere	MSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLIWKSF*
Ga0105245_128104862	3300009098	Miscanthus Rhizosphere	MTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLL
Ga0075418_106155934	3300009100	Populus Rhizosphere	MMAIMSYQAIIIVLALALLLSGVAKQADNDLNEALGLKNKPLLQMIVGIGTGLLILKSF*
Ga0105247_104691601	3300009101	Switchgrass Rhizosphere	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNTPLLQMIVGIGTGLLILKSF*
Ga0105241_110370891	3300009174	Corn Rhizosphere	VSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF*
Ga0105242_120859662	3300009176	Miscanthus Rhizosphere	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNTPLLQMIVGIGTGLLILKPF*
Ga0105237_115647472	3300009545	Corn Rhizosphere	MSYQAVTIVLAPALLLSGVAQQADNDLNEALGIKNTPLLQMIVGIGTGLLILKSF*
Ga0105238_117131202	3300009551	Corn Rhizosphere	MSYQAITIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGISLLIWKSF*
Ga0105249_106196101	3300009553	Switchgrass Rhizosphere	MSYQAVTIVLELALLLSGVAQQADNDLNEALGLKNTPLLQMIVGIGTGLLILKSF*
Ga0126374_100285764	3300009792	Tropical Forest Soil	LGHGAVTGAMKGAIMSTHAVIIVLALALLLSGVAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF*
Ga0126374_104106331	3300009792	Tropical Forest Soil	MSYQAIIIVLALALLLSGVAEQADNDLNEALGIKDTPLLQLIVGIGTGLLIWKSF*
Ga0126384_100280878	3300010046	Tropical Forest Soil	MKGAIMSTHAVITVLALALLLSGVVEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF
Ga0126384_107729493	3300010046	Tropical Forest Soil	MTYQAIIIVLALALLLSGVAEQADNDLNEALGIKDPPLLQLIVGIGTGLLIWKSF*
Ga0126382_102999851	3300010047	Tropical Forest Soil	LGHGAVTGAMKGAIMSTHAVITVLALALLLGGVAERTDNDLNEALGIKHTPLLQLIVGISTGLLIWKSF*
Ga0126370_100039545	3300010358	Tropical Forest Soil	MKGAIMSTHAVITVLALALLLSGVAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF
Ga0126370_122932561	3300010358	Tropical Forest Soil	MSYQAIIIVLALALLLSGVAEQADNDLNEALGIKHTPLLQFIVGIGTGLLIWKSF*
Ga0134128_105503343	3300010373	Terrestrial Soil	VLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0126381_1006626993	3300010376	Tropical Forest Soil	MSAHALIIILALALLLSGVAEQADNDLNEALGIKNTPLLQLIVGIGTGLLIWKSF*
Ga0134126_112472312	3300010396	Terrestrial Soil	MSYQALTIVLALALLLSGIAQQADKDLNEALGIKNAPLLQLIVGIGTGLLILKSF*
Ga0134126_122061252	3300010396	Terrestrial Soil	ALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0134124_115275983	3300010397	Terrestrial Soil	MTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILK
Ga0126383_119826552	3300010398	Tropical Forest Soil	VVEQADNDLNEALGIKHTPLLQFIVGIGTGLLIWKSF*
Ga0105246_117231951	3300011119	Miscanthus Rhizosphere	MSYQAVTIVLALALLLSGVAQQADNDLNEALGLKNTPLLQMIVGIGT
Ga0157300_10056863	3300012884	Soil	MSYQAITIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0157300_10834611	3300012884	Soil	MMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLIWKSF*
Ga0157294_100187361	3300012892	Soil	MSYQAITIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILK
Ga0157285_100588212	3300012897	Soil	QVIIMTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTLLLQLIVGIGTGLLILKSF*
Ga0157289_101093141	3300012903	Soil	IIWRYWLSPDQVIIMTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0157296_102572452	3300012905	Soil	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKDTPLLQLIVGIGTGLLILKSF*
Ga0157295_101416012	3300012906	Soil	MSYQVVTIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILK
Ga0157286_101101752	3300012908	Soil	MSYQAITIVLALALLLSRVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0157308_102348791	3300012910	Soil	IVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0157298_102981622	3300012913	Soil	MSYQAVTIVLALALLFSGVAQQADNDLNEALGIKNTRLLQLIVGIGTGLLILKSF*
Ga0157297_101698032	3300012914	Soil	IAQQADKDLNEALGIKNTLLLQLIVGIGTGLLILKSF*
Ga0157297_103966391	3300012914	Soil	MFALFRPQNQLVIIWRYWLSPDQVIIMTYQALTIVLTLALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0157302_104660081	3300012915	Soil	VSYQAIIIVLALALLLSGVAEQADNDLNEALGIKDTPLLQFIVGIGTGLLIWKS
Ga0157310_104807362	3300012916	Soil	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNTRLLQLIVGIGTGLLILKSF*
Ga0164301_117685102	3300012960	Soil	MSYQAVTIVLALALLLSGVAQQADNDLNEALGLKNTPLLQMIVGIGTGLLIWKSF*
Ga0126369_104783313	3300012971	Tropical Forest Soil	LALALLLSGVAEQVDNDLNEVLGIKDALVGIGRLLIWKSF*
Ga0126369_105785341	3300012971	Tropical Forest Soil	ALLLSGVAEQADNDLNEALGIKNTPLLQLIVGIGTGLLIWKSF*
Ga0157373_110108492	3300013100	Corn Rhizosphere	MSYQAVTIVLSLALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0157370_116841531	3300013104	Corn Rhizosphere	IMSYQAIIIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLIWKSF*
Ga0157369_107941501	3300013105	Corn Rhizosphere	IMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLILKSF*
Ga0157374_123136072	3300013296	Miscanthus Rhizosphere	LAVLSPDPVIIMSYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0157378_118763741	3300013297	Miscanthus Rhizosphere	MRGIMSFQSIIIVLAMALLLSGIAQQTDKDLTEALGIKDMPLLQLIIGIGTGLLMWRCF*
Ga0157378_119650562	3300013297	Miscanthus Rhizosphere	MSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLILKSF*
Ga0163162_129871521	3300013306	Switchgrass Rhizosphere	LLLSGVAEQADKDLNEALGIKDTPLLQFIVGIGTGLLIWKSF*
Ga0163162_134019042	3300013306	Switchgrass Rhizosphere	MSSIMSYQAFTIVLALALLLSGVAEQADNDLNEALGIKHTPLLQFIVGIGTGLLIWKSF*
Ga0157377_103458761	3300014745	Miscanthus Rhizosphere	MSYQALTIVLSLALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF*
Ga0157379_101307001	3300014968	Switchgrass Rhizosphere	MSYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLVQLIVGIGTGLLILKSF*
Ga0157376_127415922	3300014969	Miscanthus Rhizosphere	LALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF*
Ga0132258_108965923	3300015371	Arabidopsis Rhizosphere	LGHCAVTGAMKGAIMSTHAIIIVLALALLLSGVAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF*
Ga0132258_128575832	3300015371	Arabidopsis Rhizosphere	MRGIMSFQSIVIVLAMALLLSGIAEQTDKDLTKALGIKDMPFLQLIVGIGTGLLMWMSF*
Ga0132256_1008175301	3300015372	Arabidopsis Rhizosphere	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNAPLLQLIVGIGTGLLILKSF*
Ga0132256_1008575831	3300015372	Arabidopsis Rhizosphere	MRGIMSFQSIVIVLAMALLLSGIAEQTDKDLTKALGIKDMPLLQLIVGICTGLF
Ga0132257_1014940872	3300015373	Arabidopsis Rhizosphere	MRGIMSFQSIVIVLAMALLLSGIAEQTDKDLTKALGIKDMPFLQLIVGIGTGLLMWRSF*
Ga0132255_1026982951	3300015374	Arabidopsis Rhizosphere	LGHGAVTGAMKGAIMSTHAVIIVLALALLLSGVAQQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF
Ga0132255_1030525243	3300015374	Arabidopsis Rhizosphere	SGVAEQADNDLNEALGIKDTPLLQFIVGIGTGLLIWKSF*
Ga0132255_1044096151	3300015374	Arabidopsis Rhizosphere	MRGIMSFQSIVIVLAMALLLSGIAEQTDKDLTKALGIKDMPLLQLIVGIGTGLLMWRSF*
Ga0182034_114729962	3300016371	Soil	IGSGGAIVSYHAIVIVLALSLLLSGVVEQADNDLNDALGIKDTPLLQLIVGIVTGLLIWKSF
Ga0182040_102786462	3300016387	Soil	VSYHAIVIVLALSLLLSGVVEQADNDLNEALGIKDTPLLQLIVGIVTGLLIWKSF
Ga0163161_107137411	3300017792	Switchgrass Rhizosphere	VLSPDQVIIMSYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF
Ga0163161_114450142	3300017792	Switchgrass Rhizosphere	MSAIMSYQAFTIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLIWKSF
Ga0173481_100242492	3300019356	Soil	MSYQAITIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF
Ga0173481_101281032	3300019356	Soil	MFALFRPQNQLVIIWRYWLSPDQVIIMTYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF
Ga0173481_102178582	3300019356	Soil	MAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLILF
Ga0173481_108857041	3300019356	Soil	MSYQAFTIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMVVGIGTG
Ga0173482_100276575	3300019361	Soil	LLSGIAQQADKDLNEALGIKNTPLLELIVGIGTGLLILKSF
Ga0173482_100761994	3300019361	Soil	MSYQAFTIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLIWKSF
Ga0173482_103783981	3300019361	Soil	MAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLKMIVGIGTGLLILKSF
Ga0173479_105147102	3300019362	Soil	MSSIMSYQAFTIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLILKSF
Ga0154015_13380881	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	MAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF
Ga0126371_103410493	3300021560	Tropical Forest Soil	MSTHVVIIILALALLLSGIAEQADNDLNEALGIRNTPLLQLIVGIGTGLLILKSF
Ga0126371_104501694	3300021560	Tropical Forest Soil	LALALLLSGVAEQADNDLNEALGIKNTLLLQLIVGIGTGLLIWKSF
Ga0126371_109164023	3300021560	Tropical Forest Soil	MSAHALIIILALALLLSGVAEQADNDLNEALGIKNTPLLQLIVGIGTGLLIWKSF
Ga0126371_110909831	3300021560	Tropical Forest Soil	MSYQAIIIVLALALLLSGVAEQADNDLNEALGIKDTPLLQLIVGIGTGLLIWKSF
Ga0126371_111046064	3300021560	Tropical Forest Soil	LLLSGVADQADNDLNEALGIKDTPLLQLIVGIGTGLLIWKSF
Ga0247795_10646962	3300022899	Soil	MMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLILKSF
Ga0247751_10879022	3300023069	Soil	MSYQAITIVLALALLLSGVAQQADNDLNEALGIKNTPLLQLIVGIGTGL
Ga0207685_103268711	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKGAIMSTHAVIIVLALALLLSGVAEQADNDLNEALGIKDTPLLQFIVGIGTGLLIWKSF
Ga0207693_101681192	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LSPDQVIIMSYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF
Ga0207693_108137841	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LISGVAEQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF
Ga0207657_105352701	3300025919	Corn Rhizosphere	QVIIMSYQALTIVLALALLLSGIAQQADKDLNEALGIKNTPLLQLIVGIGTGLLILKSF
Ga0207659_112157061	3300025926	Miscanthus Rhizosphere	LASDWSSSVIFCLGWMMAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNAPLLQMIVGIGTGLLILKSF
Ga0207664_103356451	3300025929	Agricultural Soil	AVIIVLALALLLSGVAQQADNDLNEALGIKHTPLLQLIVGIGTGLLIWKSF
Ga0207670_110551812	3300025936	Switchgrass Rhizosphere	MAIMSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIG
Ga0207667_110989262	3300025949	Corn Rhizosphere	LLSGIAQQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF
Ga0207640_108348682	3300025981	Corn Rhizosphere	MAIMSYQAIIVVLALALLLSGVAEQADNDLNEALGIKNTPLLQLIVGIGTGLLILKSF
Ga0207658_110777752	3300025986	Switchgrass Rhizosphere	MMAIMSYHAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF
Ga0207677_113785582	3300026023	Miscanthus Rhizosphere	MSYQAVTIVLALALLLSGVAQQADNDLNEALGIKNTPLLQMIVGIGTGLLILKSF
Ga0207639_120792402	3300026041	Corn Rhizosphere	MSYQAFTIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLILKSF
Ga0207674_116533712	3300026116	Corn Rhizosphere	MSYQAIIIVLALALLLSGVAEQADNDLNEALGIKNAPLLQMIVGIGTGLLIWKSF
Ga0268266_103751101	3300028379	Switchgrass Rhizosphere	MSYQAIIIVLALALLLSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLIWKSF
Ga0268265_117221273	3300028380	Switchgrass Rhizosphere	LSGVAEQADNDLNEVLGLKNTPLLQMIVGIGTGLLILKSF
Ga0318560_105271722	3300031682	Soil	LIGSGGAIVSYHAIVIVLALSLLLSGVVEQADNDLNDALGIKDTPLLQLIVGIGTGLLIWKSF
Ga0306918_105392922	3300031744	Soil	LIGSGGAIVSYHAIVIVLALSLLLSGVVEQADNDLNDALGIKDTPLLQLIVGIVTGLLIWKSF
Ga0306919_106188662	3300031879	Soil	VSYHAIVIVLALSLLLSGVVEQADNDLNDALGIKDTPLLQLIVGIVTGLLIWKSF
Ga0310913_109897692	3300031945	Soil	ALLLSGVVEQADNDLNEALGIKDTPLLQLIVGIVTGLLIWKSF
Ga0310914_104019803	3300033289	Soil	VSYHAIVIVLALSLLLSGVVEQADNDLNDALGIKDTPLLQLIVGIGTGLLIWKSF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048596

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences