Metagenome / Metatranscriptome Family F048535

Basic Information
Family ID	F048535
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	71 residues
Representative Sequence	MTQETVRALPDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGAVGVSVAIGGVRGRPVKAKADKKPE
Number of Associated Samples	107
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	91.16 %
% of genes near scaffold ends (potentially truncated)	20.95 %
% of genes from short scaffolds (< 2000 bps)	71.62 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (58.784 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (13.514 % of family members)
Environment Ontology (ENVO)	Unclassified (29.054 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.297 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104 1JGI12270J11330_102358492 2JGI12270J11330_102830021 3JGI12712J15308_1000012220 4rootH2_100068513 5Ga0062385_104768182 6Ga0062389_1031722021 7Ga0070711_1001520562 8Ga0070737_100827543 9Ga0070732_100133204 10Ga0070732_100607833 11Ga0075028_10000083513 12Ga0075029_10000096510 13Ga0075029_1000060982 14Ga0075019_101284742 15Ga0075030_1003324781 16Ga0075030_1003944281 17Ga0075030_1004640623 18Ga0075018_105941122 19Ga0075521_102230602 20Ga0075520_10323602 21Ga0075520_10729103 22Ga0105245_101343482 23Ga0073936_101713852 24Ga0116229_112316242 25Ga0116229_116291401 26Ga0116221_13734682 27Ga0105237_119513832 28Ga0105238_126229381 29Ga0116129_10117963 30Ga0116135_12101482 31Ga0116231_103656932 32Ga0116227_111353312 33Ga0116219_100337262 34Ga0136449_1010374393 35Ga0136449_1036533072 36Ga0126383_110343882 37Ga0181518_104736542 38Ga0181517_104868572 39Ga0181529_101462312 40Ga0181537_107550672 41Ga0182018_103003841 42Ga0182014_101530333 43Ga0182013_100021983 44Ga0182013_100238153 45Ga0182015_100555433 46Ga0182015_101603243 47Ga0182015_107727151 48Ga0182024_1000123462 49Ga0182024_110879222 50Ga0182024_121125652 51Ga0181536_101125962 52Ga0182030_100877412 53Ga0182030_104327112 54Ga0187879_100321672 55Ga0181520_100197335 56Ga0181520_105613952 57Ga0187884_101316132 58Ga0187867_100345634 59Ga0187867_104747142 60Ga0187875_100737243 61Ga0187875_103415462 62Ga0187883_101276632 63Ga0187883_107642922 64Ga0187871_106170031 65Ga0187859_100743051 66Ga0187859_105322591 67Ga0187784_115073792 68Ga0182031_10404812 69Ga0182031_14441373 70Ga0193727_10900513 71Ga0210386_110097091 72Ga0210394_1000011474 73Ga0210390_104071992 74Ga0210390_112427611 75Ga0210398_1000036428 76Ga0126371_127659092 77Ga0212088_100984603 78Ga0224553_10419612 79Ga0224556_11579231 80Ga0208193_10084313 81Ga0209385_12037922 82Ga0209584_103988142 83Ga0207687_105023891 84Ga0208044_10379352 85Ga0209580_100203782 86Ga0209580_100317503 87Ga0209517_102338372 88Ga0209068_100000362 89Ga0209067_100275823 90Ga0209415_101074265 91Ga0209006_1000013242 92Ga0209698_1000047243 93Ga0209698_1000099415 94Ga0209698_103687514 95Ga0209061_10576322 96Ga0302301_11199421 97Ga0302233_100588543 98Ga0302156_103628622 99Ga0302224_102292702 100Ga0302225_101438613 101Ga0302201_103715611 102Ga0311341_103742111 103Ga0311369_110026082 104Ga0311369_110554102 105Ga0311340_104227521 106Ga0311352_104795771 107Ga0311330_101158054 108Ga0311330_112748052 109Ga0311331_113859082 110Ga0302188_104333491 111Ga0311338_108077703 112Ga0302274_103367551 113Ga0311355_115507562 114Ga0311354_103093891 115Ga0311354_106268841 116Ga0265745_10191212 117Ga0302308_103149773 118Ga0265760_102003822 119Ga0302325_100140622 120Ga0302325_116044472 121Ga0302324_1010522062 122Ga0302324_1011706561 123Ga0302324_1019878532 124Ga0302324_1035478252 125Ga0302318_106159022 126Ga0302326_110922321 127Ga0310686_1141141374 128Ga0310686_1177900582 129Ga0310686_1179295132 130Ga0310686_1189388335 131Ga0310686_1190339521 132Ga0307474_105019031 133Ga0311301_107840963 134Ga0335078_108121252 135Ga0335078_108619202 136Ga0335078_109198572 137Ga0335074_1000332111 138Ga0335074_101290351 139Ga0335072_100031078 140Ga0335072_100345558 141Ga0335073_103973852 142Ga0326728_1000525029 143Ga0326728_103847672 144Ga0334804_036775_27_245 145Ga0334804_068002_597_875 146Ga0334828_150177_368_538 147Ga0334840_129750_2_223 148Ga0334790_000136_7775_8005
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104 1JGI12270J11330_102358492 2JGI12270J11330_102830021 3JGI12712J15308_1000012220 4rootH2_100068513 5Ga0062385_104768182 6Ga0062389_1031722021 7Ga0070711_1001520562 8Ga0070737_100827543 9Ga0070732_100133204 10Ga0070732_100607833 11Ga0075029_10000096510 12Ga0075030_1003324781 13Ga0075030_1003944281 14Ga0075018_105941122 15Ga0075521_102230602 16Ga0075520_10323602 17Ga0105245_101343482 18Ga0073936_101713852 19Ga0116229_112316242 20Ga0116229_116291401 21Ga0116221_13734682 22Ga0105237_119513832 23Ga0116129_10117963 24Ga0116135_12101482 25Ga0116231_103656932 26Ga0136449_1010374393 27Ga0136449_1036533072 28Ga0126383_110343882 29Ga0182018_103003841 30Ga0182014_101530333 31Ga0182013_100021983 32Ga0182015_100555433 33Ga0182024_110879222 34Ga0187867_100345634 35Ga0187875_100737243 36Ga0187883_107642922 37Ga0187859_105322591 38Ga0193727_10900513 39Ga0210386_110097091 40Ga0210394_1000011474 41Ga0210390_104071992 42Ga0210398_1000036428 43Ga0126371_127659092 44Ga0224556_11579231 45Ga0209415_101074265 46Ga0302233_100588543 47Ga0302201_103715611 48Ga0311340_104227521 49Ga0311331_113859082 50Ga0302188_104333491 51Ga0311354_106268841 52Ga0265745_10191212 53Ga0265760_102003822 54Ga0310686_1177900582 55Ga0307474_105019031 56Ga0335072_100031078 57Ga0335072_100345558 58Ga0335073_103973852 59Ga0334828_150177_368_538 60Ga0334790_000136_7775_8005
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1Ga0075030_1004640623 2JGI12270J11330_102358492 3JGI12270J11330_102830021 4JGI12712J15308_1000012220 5rootH2_100068513 6Ga0062385_104768182 7Ga0062389_1031722021 8Ga0070711_1001520562 9Ga0070737_100827543 10Ga0070732_100133204 11Ga0075028_10000083513 12Ga0075029_10000096510 13Ga0075029_1000060982 14Ga0075030_1003324781 15Ga0116229_116291401 16Ga0105237_119513832 17Ga0105238_126229381 18Ga0116135_12101482 19Ga0116231_103656932 20Ga0116227_111353312 21Ga0136449_1036533072 22Ga0126383_110343882 23Ga0181518_104736542 24Ga0181517_104868572 25Ga0182018_103003841 26Ga0182015_100555433 27Ga0182015_107727151 28Ga0182024_1000123462 29Ga0182024_110879222 30Ga0181536_101125962 31Ga0187867_100345634 32Ga0187875_100737243 33Ga0187875_103415462 34Ga0187883_107642922 35Ga0187871_106170031 36Ga0187859_105322591 37Ga0193727_10900513 38Ga0210386_110097091 39Ga0210394_1000011474 40Ga0210390_104071992 41Ga0210390_112427611 42Ga0210398_1000036428 43Ga0126371_127659092 44Ga0212088_100984603 45Ga0224556_11579231 46Ga0208193_10084313 47Ga0209385_12037922 48Ga0209584_103988142 49Ga0207687_105023891 50Ga0208044_10379352 51Ga0209580_100203782 52Ga0209067_100275823 53Ga0209698_103687514 54Ga0302301_11199421 55Ga0302224_102292702 56Ga0302225_101438613 57Ga0311369_110554102 58Ga0311331_113859082 59Ga0265745_10191212 60Ga0302325_100140622 61Ga0302324_1035478252 62Ga0302326_110922321 63Ga0310686_1177900582 64Ga0310686_1179295132 65Ga0310686_1189388335 66Ga0307474_105019031 67Ga0335078_108121252 68Ga0335078_109198572 69Ga0335074_1000332111 70Ga0335072_100031078 71Ga0335072_100345558 72Ga0335073_103973852 73Ga0326728_103847672 74Ga0334804_036775_27_245 75Ga0334804_068002_597_875 76Ga0334828_150177_368_538 77Ga0334790_000136_7775_8005
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.84% β-sheet: 2.04% Coil/Unstructured: 56.12%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF13604	AAA_30	8.11
PF01555	N6_N4_Mtase	4.73
PF05593	RHS_repeat	2.70
PF00816	Histone_HNS	2.70
PF00589	Phage_integrase	2.03
PF07963	N_methyl	2.03
PF01443	Viral_helicase1	1.35
PF05284	DUF736	1.35
PF03527	RHS	0.68
PF13538	UvrD_C_2	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	4.73
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	4.73
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	4.73
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	3.38
COG2916	DNA-binding protein H-NS	Transcription [K]	2.70
COG5489	Uncharacterized conserved protein, DUF736 family	Function unknown [S]	1.35
COG0223	Methionyl-tRNA formyltransferase	Translation, ribosomal structure and biogenesis [J]	0.68
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.68
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.68
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	41.22 %
Unclassified	root	N/A	58.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	41.22 %
Unclassified	root	N/A	58.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.22 %
Unclassified	root	N/A	58.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.05 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.35 %
Synergistetes	phylum	All Organisms → cellular organisms → Bacteria → Synergistetes	0.68 %
Unclassified	root	N/A	58.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.35 %
Synergistia	class	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia	0.68 %
Unclassified	root	N/A	58.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.70 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.35 %
Synergistales	order	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales	0.68 %
Unclassified	root	N/A	58.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.35 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.68 %
Synergistaceae	family	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae	0.68 %
Unclassified	root	N/A	58.78 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.68 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.68 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.35 %
Unclassified	root	N/A	58.78 %
unclassified Synergistaceae	no rank	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → unclassified Synergistaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.68 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.35 %
Synergistaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → unclassified Synergistaceae → Synergistaceae bacterium	0.68 %
Unclassified	root	N/A	58.78 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.68 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.68 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.35 %
Synergistaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → unclassified Synergistaceae → Synergistaceae bacterium	0.68 %
Unclassified	root	N/A	58.78 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10235849	Not Available	598	Open in IMG/M
3300000567\|JGI12270J11330_10283002	Not Available	521	Open in IMG/M
3300001471\|JGI12712J15308_10000122	All Organisms → cellular organisms → Bacteria	21736	Open in IMG/M
3300003320\|rootH2_10006851	All Organisms → cellular organisms → Bacteria	28511	Open in IMG/M
3300004080\|Ga0062385_10476818	Not Available	764	Open in IMG/M
3300004092\|Ga0062389_103172202	Not Available	615	Open in IMG/M
3300005439\|Ga0070711_100152056	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300005524\|Ga0070737_10082754	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300005542\|Ga0070732_10013320	All Organisms → cellular organisms → Bacteria → Proteobacteria	4552	Open in IMG/M
3300005542\|Ga0070732_10060783	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M

Showing 1 to 10 of 147 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.92%
Host-Associated	Host-Associated	6.08%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	25.68%
Plants	Host-Associated → Plants	6.08%
Terrestrial	Environmental → Terrestrial	68.24%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	16.89%
Peat	Environmental → Terrestrial → Peat	25.68%
Peat Moss	Host-Associated → Plants → Peat Moss	2.70%
Rhizome	Host-Associated → Plants → Rhizome	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.70%
Sediment	Environmental → Aquatic → Sediment	8.78%
Soil	Environmental → Terrestrial → Soil	42.57%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	1.35%
Loam	Environmental → Terrestrial → Soil → Loam	2.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	25.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.54%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.35%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.46%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	25.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.03%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.38%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.08%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.73%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.35%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.35%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	13.51%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.43%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.03%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.41%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.38%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.35%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.78%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M

Showing 1 to 10 of 107 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102358492	3300000567	Peatlands Soil	MTIETVRALSDGDLSQVVAWAQAEIKARAEKRKQETIAKIKELAGAVGVTVAIGGVRGRPRTVHNKSIAGLKALSR*
JGI12270J11330_102830021	3300000567	Peatlands Soil	MTLETVRALSDADLSQVAVWAGQEIEARKEKRKQEAIAKIKELAGAVGVAVLIKGQRGRPAKS
JGI12712J15308_1000012220	3300001471	Forest Soil	MTQESVKALSDVDLSQVIIWAQEEVKTRTERRKQEAIAKIKALALQVGVSVSIAGTRGRPATIRTATKTVKAG*
rootH2_100068513	3300003320	Sugarcane Root And Bulk Soil	MTQDTVKALTDGELVQVIAWAQDEQKARKSHRKRETVAKIKQMAKLAGVSVSIQGTRGRQSSRTAVHDER*
Ga0062385_104768182	3300004080	Bog Forest Soil	MTLETVKTLSDAELAQVIVWAQDEIKTRTERRRQEAIATIKSLAAQNNISVSIAGMRGRPARIKSAEKAEKPPETVRR
Ga0062389_1031722021	3300004092	Bog Forest Soil	MTRDVVKALSDTELEQVVAWAQDEQKARAERRKRETIAKIKALANAVGVSVSIAGGRGRPPKTRVSEHDSGNSQ*
Ga0070711_1001520562	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTLESVKALADSEIEQVIGWGRQELKARAEKRKAETIAKIKQLAGSVGVRVAIGGVRGRPAKGRPGAKPEKTAR*
Ga0070737_100827543	3300005524	Surface Soil	MTQEAVKALPEATLSQVIIWAQDELKARAEQRKQVTIAKIKELAGTAGLSITINGRRGRPPKAKVDAVPQRAGKL*
Ga0070732_100133204	3300005542	Surface Soil	MTQEAIRAFTDSELSQFVAWAQSEIKARTERRKQETIAKIKELAGAVGVSVAIGGVRGRPVRPHAKPSQKG*
Ga0070732_100607833	3300005542	Surface Soil	MTIETVRALPDADLAQVAAWAQAEIKTRAEKRKQETIAKIKELAGAVGVTVAIGGTRGRPLKPKTVSGKAPAKNGG*
Ga0075028_10000083513	3300006050	Watersheds	MTQEAIKALTDVELSQVVVWTQAEVKARTEHRKQEAIARIKELAGAVGVSVAIGGVRGRPARVRAKPSLKG*
Ga0075029_10000096510	3300006052	Watersheds	MTIDAVKALSDADLSQVAAWAQSEIKARAERRKQETIARIKELAGSVGVSVAIGGTRGRPVKNGHKPGQKT*
Ga0075029_1000060982	3300006052	Watersheds	MTQETVKALSDTDLSQVITWAQEEIRTRTERRKQDAIAKIKALAAQVGVAVSIAGVRGRPARIKPVTKPAKVL*
Ga0075019_101284742	3300006086	Watersheds	MTQETVRALSDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGTVGVTVAIDGVRGRPRKGRRGMEKKFAGR*
Ga0075030_1003324781	3300006162	Watersheds	NDTELAQVVAWGQEEQKARAEKRRQETIAKIKELAGAVGVSVSISGARGRPAKPSEIRTGKAGQKAG*
Ga0075030_1003944281	3300006162	Watersheds	PDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGAVGVSVVIGGARGRPKKERNAKA*
Ga0075030_1004640623	3300006162	Watersheds	MTQETVRALPDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGAVGVSVAIGGVRGRPVKAKADKKPE*
Ga0075018_105941122	3300006172	Watersheds	MTQETVRALPDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGTVGVTVAIGGVR
Ga0075521_102230602	3300006642	Arctic Peat Soil	MKPDDLKALSDSDLAQLRAAAESEQKERAEKRKQETIAKIKELARSIEVDVRIAGVRGRPPKGKEERGKTGAGAGR*
Ga0075520_10323602	3300006795	Arctic Peat Soil	MTMESIKALSDSELTEFIASAQGELKARAEKRKQETIAKIRELAGSVGVTVKIDGTRGRPPKAKAEKPKRA*
Ga0075520_10729103	3300006795	Arctic Peat Soil	MTQENIKALSDSELTQVIASAQDELKARAEKRKQETIAKIRELAGSVGVTVRIDGTRGRPPKAKEEKPKKA*
Ga0105245_101343482	3300009098	Miscanthus Rhizosphere	MTQDMVKALADGELVQVIAWAQAEQQARAERRKRETIAKIKELAGAVGVSVSIAGVRGRPKKSSLQKTKA*
Ga0073936_101713852	3300009175	Freshwater Lake Hypolimnion	MTQETVRALSDADLSQVIAWAQAEIKARAEKRKQETIAKIKELAGAVGVSVAIGGARGRPLKRSTQPAHLRVKQ*
Ga0116229_112316242	3300009500	Host-Associated	MTQDAIRALTDADLAQVILWGQAEVKARTERRKQETIAKIKELAGGVGVKVAISGQRGRPVAAKALK
Ga0116229_116291401	3300009500	Host-Associated	MTPDTVRALSDLELDQFIAIAQGEQKARAERHKHETIAKIKLLARSIEVGIRIEGVRGRQPGAAKGAKKEN*
Ga0116221_13734682	3300009523	Peatlands Soil	HNYERRRGFMTVETIRALADADLSQVALWAQAEIKARAEKRKQETIAKIKELAGAVGVTVAIGGVRGRPAKGMKASIRTTSS*
Ga0105237_119513832	3300009545	Corn Rhizosphere	MTQEAVRALTDTELNQVEAWVQVERKARTERRKQEAIAKIKELAGAVGVSVAIGGTRGRPAQSRTKPAAKA*
Ga0105238_126229381	3300009551	Corn Rhizosphere	MTQETVRALSDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGTVGVSVAIGGVRGRPARPTHVKTGEGH*
Ga0116129_10117963	3300009633	Peatland	MTQETVRALPDADLMQVVAWAQAEIKARAEKRKQETIAKIRELAEAVGVTVAIGGVRGRPSTKPPHGVRTKT*
Ga0116135_12101482	3300009665	Peatland	MTQDTVKAMSDGELVQVIAWAQEEQKARTERRKRETIAKIKEMAQTVGVSVSIAGVRGRPTRKDRYHEKPSTQH*
Ga0116231_103656932	3300009697	Host-Associated	MTQDMVKGLSDGELVQVIAWAQGEQKARAEQRKRETIARIKELAQQAGVSVSIAGRRGSPGRPAKGAGARTVR*
Ga0116227_111353312	3300009709	Host-Associated	MTQDAIRALTDADLAQVILWGQAEVKARTERRKQETIAKIKELAGGVGVKVAISGQRGRPVAAKALKPAKGKA*
Ga0116219_100337262	3300009824	Peatlands Soil	MTVETIRALADADLSQVALWAQAEIKARAEKRKQETIAKIKELAGAVGVTVAIGGVRGRPAKGMKASIRTTSS*
Ga0136449_1010374393	3300010379	Peatlands Soil	LSDSELTEVIASAQDELKARAEKRRQETIAKIRELAGSVGVTVRIDGTRGRPPKAKEE
Ga0136449_1036533072	3300010379	Peatlands Soil	MTIEAVRALSDGDLSQVVAWAQAEIKARAEKRKQETIAKIRELAGTVGVSVAIGGVRGRPVRAKNEKKLNILVNTSP*
Ga0126383_110343882	3300010398	Tropical Forest Soil	LSDSEIEQVIAWGQAELKSRAERRRQETIAKIKQLACAVGVRVAIGGVRGRPARVKPAPEKTAR*
Ga0181518_104736542	3300014156	Bog	MTQETVRTLSDADLSQVITWAQDEIKTRTERRKQEAIAKIKALASQVGVSVSIAGVRGRPARLKQAAKPEKAG*
Ga0181517_104868572	3300014160	Bog	MTQEAIRALTDGELSQVVAWAQVEIKARTERRKQETIAKIKELAGTVGVSVAIGGVRGRPVKSNHKPGQKA*
Ga0181529_101462312	3300014161	Bog	MTQDAIRALTDADQAQVILWGQAEVKARTERRKQETIAKIKELACVVGVKVAISGQRGRPVAAKAPKPARAKA*
Ga0181537_107550672	3300014201	Bog	MTQDAIRALTDADLAQVILWGQAEVKARTERRKQETIAKIKELAGAVGVKVAISGQRGRPVAATVPKPAKGKA*
Ga0182018_103003841	3300014489	Palsa	MTQDTVKELGDAELEQVIDWAQGEQKARAEKRKRETIAKIKELAQTVGVSVNIAGTRGRPAKVNRLQQRA*
Ga0182014_101530333	3300014491	Bog	LNDKELLEVIAWAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGTRGRPPKAREDKPKAQTITNEKGKLL*
Ga0182013_100021983	3300014492	Bog	LSDSELEQVRAWTETEQKARAEKKKQDTIAKIRELAGSVGVAVKIDGARGRPPKAKESKPAKA*
Ga0182013_100238153	3300014492	Bog	VTQETVRALSDVELSQVITWAQDEIKTRTERRKQEAIAKIKALALQVGVSVSIAGVRGRPARLKQVTKPTKA*
Ga0182015_100555433	3300014495	Palsa	MTPDTVKALSDSELVQVIAWAQTETRARTERRKQETIAKIKAMAAEVGVSVAIQGGRGRPAKANHAGRFKK*
Ga0182015_101603243	3300014495	Palsa	MTQDTVKELGDAELEQVIDWAQGEQKARAEKRKRETIAKIKELAQTVGVSVNIAGTRGRPAKANRLQQRA*
Ga0182015_107727151	3300014495	Palsa	MTQDAVKALSDNELVQVIAWAQTETKARTERRKQETIAKIKAMAAEVGVSVAIQGSRGRPAKGKTART*
Ga0182024_1000123462	3300014501	Permafrost	MTIETVRALSDSDLSQVVAWAQAEMKTRAEKRKQETIAKIKELAGTVGVSVAIGGVRGRPAKGKATKQ*
Ga0182024_110879222	3300014501	Permafrost	MTQETVQALSDSELAQVIAWGQEELNARAEKRKRETIAKIKELAGAVGVSVSIGGMRGRPATLATKSKARKAD*
Ga0182024_121125652	3300014501	Permafrost	MTQEAIRALTDADLAQVILWGQAEVKARTERRKQETIAKIKELAGIVGVKVAIGGQRGRPVAAKAPKPALRKV*
Ga0181536_101125962	3300014638	Bog	MTQDTVKALSDADLSQVITWAQEEIKTRTERRKQEAIAKIKALASQVGVSVSIAGVRGRPARIRTTTKAAKAG*
Ga0182030_100877412	3300014838	Bog	MTQDTVKALSDADLSQVITWAQEEIKTRTERRKQDAIAKIKALASQVGVTVSIAGVRGRPARIRTTTKTAKAG*
Ga0182030_104327112	3300014838	Bog	LNDKELLEVIAWAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGTRGRPPKAREDKPKAQTSITEKGKLP*
Ga0187879_100321672	3300017946	Peatland	MTEQNIKALSDSELEQVRAWTESECKARAEKKKQDTIAKIRELAGSVGVAVKIDGARGRPPKAKESKPAKA
Ga0181520_100197335	3300017988	Bog	MTQDAIRALTDADQAQVILWGQAEVKARTERRKQETIAKIKELACVVGVKVAISGQRGRPVAAKAPKPARAKA
Ga0181520_105613952	3300017988	Bog	MTQEAIRALTDGELSQVVAWAQVEIKARTERRKQETIAKIKELAGTVGVSVAIGGVRGRPVKSNHKPGQKA
Ga0187884_101316132	3300018009	Peatland	ALSDSELVDVVSWAQAEQKARAEKKKQETIAKIRELAGSVGVAVHIDGTRGRPPKAREEKPGKA
Ga0187867_100345634	3300018033	Peatland	MKPDELKALSDSDLAQLRTAAEAEQKARAEKRKQETIAKIRELAGSVGVTVKIDGARGRPPKAKEEKLKRG
Ga0187867_104747142	3300018033	Peatland	MTEQNIKALSDSEMEQVRAWTEAECKARAEKKKQDTIAKIRELAGSVGVAVKIDGARGRPPKAKESKPAKA
Ga0187875_100737243	3300018035	Peatland	MTIETVRALSDGDLSQVVAWAQAEVKARAEKRKQETIAKIKELAGTVGVSVAIGGQRGRPKIERNAKARN
Ga0187875_103415462	3300018035	Peatland	CHAMTEQNIKALSDSELEQVRAWTETEQKARAEKKKQDTIAKIRELAGSVGVAVKIDGARGRPPKAKESKPAKA
Ga0187883_101276632	3300018037	Peatland	MTEQNIKALSDSELEQVRAWTEAECKARAEKKKQDTIAKIRELAGSVGVAVKIDGARGRPPKAKESKPAKA
Ga0187883_107642922	3300018037	Peatland	MTQADLRALNDDELTQVKAWAIDEEKARAEKKKQETIAKIRELAGSIDVPVRIGTRGRPPKARDNGQKKA
Ga0187871_106170031	3300018042	Peatland	MTEQSIKALSDSELVDVVSWAQAEQKARAEKKKQETIAKIRELAGSVGVAVHIDGTRGRPPKAREEKPGKA
Ga0187859_100743051	3300018047	Peatland	KALSDSDLAQLRTAAEAEQKARAEKRKQETIAKIRELAGSVGVTVKIDGARGRPPKAKEEKLKRG
Ga0187859_105322591	3300018047	Peatland	MTQETVRALSDADLVNVIAWAQGEQKARAERRKRETIAKIKELAQTVGVSVNIAGTRGRPAKVSRPQQQAQKVPQAQK
Ga0187784_115073792	3300018062	Tropical Peatland	MTIETVRALSDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGTVGVSVAIGGQRGRPTK
Ga0182031_10404812	3300019787	Bog	MTQDTVKALSDADLSQVITWAQEEIKTRTERRKQDAIAKIKALASQVGVTVSIAGVRGRPARIRTTTKTAKAG
Ga0182031_14441373	3300019787	Bog	VIAEQSIKALNDKELLEVIAWAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGTRGRPPKAREDKPKAQTITNEKGKLL
Ga0193727_10900513	3300019886	Soil	MTQEMVKALSDGELVQVIAWAQGEQKTRTERRKQETIAKIKELAKSIEVGVKIEGQRGRPSKQAVNSQ
Ga0210386_110097091	3300021406	Soil	MTQDTVKALSDGELVQVIAWAEAEQKARAEKRKRETIAKIKEMARSIEVGIRIEGVRGRPAKNSTSPAAR
Ga0210394_1000011474	3300021420	Soil	MTQEGVKALSDSELVQVEGWVKDEQKARAERKKRETIAKIKELAQVAGVQVAIGGARGRPKNGIKRG
Ga0210390_104071992	3300021474	Soil	VKALSDGELTQVVAWAQAEIKARAERRKQEAIAKIKALASAVGVSVTIAGGRGRPAKARECKEN
Ga0210390_112427611	3300021474	Soil	MTIETVRALSDGDLSQVVAWAQAEIKARAEKRKQETIARIKELAGTVGVSVAINGQRGRPAKMKSRKES
Ga0210398_1000036428	3300021477	Soil	MTQETVKALSDAELAQVAGWADEEQKVRAEKRKQEAIAKIRELAGAVGVTVAIGGVRGRPARIKPEAKPANKA
Ga0126371_127659092	3300021560	Tropical Forest Soil	MTQDTVRALSDTELPQFIAWAQAELKARAEKRKAETIAKIRELAGSVGVRVTIGGARGRPGVVRAETPTGKRKEC
Ga0212088_100984603	3300022555	Freshwater Lake Hypolimnion	MTQETVRALSDADLSQVIAWAQAEIKARAEKRKQETIAKIKELAGAVGVSVAIGGARGRPLKRSTQPAHLRVKQ
Ga0224553_10419612	3300022875	Soil	VIAEQSIKALNDKELLEVIAWAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGTRGRPPKAREDKPKAQTSITEKGKLP
Ga0224556_11579231	3300024295	Soil	MTQDAIRALTDGDLAQVATWAQAEIKTRTERRKQETIAKIKEMAGAVGVSVAIGGARGRP
Ga0208193_10084313	3300025463	Peatland	MTQETVRALPDADLMQVVAWAQAEIKARAEKRKQETIAKIRELAEAVGVTVAIGGVRGRPSTKPPHGVRTKT
Ga0209385_12037922	3300025650	Arctic Peat Soil	MTMESIKALSDSELTEFIASAQGELKARAEKRKQETIAKIRELAGSVGVTVRIDGTRGRPPKAKDEKPKKT
Ga0209584_103988142	3300025878	Arctic Peat Soil	MKPDDLKALSDSDLAQLRAAAESEQKERAEKRKQETIAKIKELARSIEVDVRIAGVRGRPPKGKEERGKTGAGAGR
Ga0207687_105023891	3300025927	Miscanthus Rhizosphere	MTQDMVKALADGELVQDIAWAQAEQQARAERRKRETIAKIKELAGAVGVSVSIAGVRGRPKKSSLQKTKA
Ga0208044_10379352	3300027625	Peatlands Soil	MTVETIRALADADLSQVALWAQAEIKARAEKRKQETIAKIKELAGAVGVTVAIGGVRGRPAKGMKASIRTTSS
Ga0209580_100203782	3300027842	Surface Soil	MTIETVRALPDADLAQVAAWAQAEIKTRAEKRKQETIAKIKELAGAVGVTVAIGGTRGRPLKPKTVSGKAPAKNGG
Ga0209580_100317503	3300027842	Surface Soil	MTQEAIRAFTDSELSQFVAWAQSEIKARTERRKQETIAKIKELAGAVGVSVAIGGVRGRPVRPHAKPSQKG
Ga0209517_102338372	3300027854	Peatlands Soil	MTIETVRALSDGDLSQVVAWAQAEIKARAEKRKQETIAKIKELAGAVGVTVAIGGVRGRPRTVHNKSIAGLKALSR
Ga0209068_100000362	3300027894	Watersheds	MTQEAIKALTDVELSQVVVWTQAEVKARTEHRKQEAIARIKELAGAVGVSVAIGGVRGRPARVRAKPSLKG
Ga0209067_100275823	3300027898	Watersheds	MTQETVRALSDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGTVGVTVAIDGVRGRPRKGRRGMEKKFAGR
Ga0209415_101074265	3300027905	Peatlands Soil	MTQDTVRALSDSELGEVIAWAQSEQKARAEKRKQETIARIRELAGTVGVSVTINGTRGRPPKAREDANGSRARH
Ga0209006_1000013242	3300027908	Forest Soil	MTQESVKALSDVDLSQVIIWAQEEVKTRTERRKQEAIAKIKALALQVGVSVSIAGTRGRPATIRTATKTVKAG
Ga0209698_1000047243	3300027911	Watersheds	MTIDAVKALSDADLSQVAAWAQSEIKARAERRKQETIARIKELAGSVGVSVAIGGTRGRPVKNGHKPGQKT
Ga0209698_1000099415	3300027911	Watersheds	MTQETVKALSDTDLSQVITWAQEEIRTRTERRKQDAIAKIKALAAQVGVAVSIAGVRGRPARIKPVTKPAKVL
Ga0209698_103687514	3300027911	Watersheds	IETVRALSDGDLSQVVAWAQAEIKARAEKRKQETIAKIKELAGAVGVSVVIGGARGRPKKERNAKA
Ga0209061_10576322	3300027968	Surface Soil	MTQEAVKALPEATLSQVIIWAQDELKARAEQRKQVTIAKIKELAGTAGLSITINGRRGRPPKAKVDAVPQRAGKL
Ga0302301_11199421	3300028731	Palsa	MTLETVKALSDAELAQVVVWVQDEIKTRTERRRQEAIATIKSLAAQNNISVSIAGLRGRPARTRTDEKAEKPATTAKQ
Ga0302233_100588543	3300028746	Palsa	MTQETVKALSDSELVLVIDWAQAEQKARAEKRKQETIAKIRELAGAVGVTVAISGVRGRPAKPDKHAVFKKRA
Ga0302156_103628622	3300028748	Bog	MTQETVKALSDTDLSQVITWAQEEIKTRTERRKQEAIAKIKALASQVGVSVSIAGVRGRPARIKPVAKPAKAAL
Ga0302224_102292702	3300028759	Palsa	MTQETVKALSDAELSQVITWAQEEIQTRTQRRKQEAIAKIKALASQVGVSVSIAGVRGRPARVKPGVKTAKAE
Ga0302225_101438613	3300028780	Palsa	MTEDTVKALSDSELVLVIDWAQAEQKARAEKRKQETIAKIRELAGAVGVTVAISGVRGRPAKADKHAVFKKRA
Ga0302201_103715611	3300028785	Bog	VIAEQSIKALNDKELLEVIAWAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGT
Ga0311341_103742111	3300029908	Bog	WAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGTRGRPPKAREDKPKAQTITNEKGKLL
Ga0311369_110026082	3300029910	Palsa	MTQEAIRALTDADLAQVILWGQAEVKARTERRKQETIAKIKELAEGVGVKVAISGQRGRPVAAKVPKPAKGKA
Ga0311369_110554102	3300029910	Palsa	MTLETVKALSDAELAQVVVWAQEEVKTRTERRRQEAIATIKSLAAQNNINISIAGLRGRPAGIRTDEKAEKPATTVKH
Ga0311340_104227521	3300029943	Palsa	MTREALKALSDSDLSEVMAWGEEERKARAEKRKQEAIAKIRELAGAVGVTVAIGGARGRPARAKPDAKAVNKLDK
Ga0311352_104795771	3300029944	Palsa	YSELVLVIDWAQAEQKARAEKRKQETIAKIRELAGAVGVTVAISGVRGRPAKPDKHAVFKKRA
Ga0311330_101158054	3300029945	Bog	MTEQKIKALSDSELEQVRAWTETEQKARAEKKKQDTIAKIRELAGSVGVAVKIDGARGRPPKAKESKPAKA
Ga0311330_112748052	3300029945	Bog	VIAEQSIKALNYKELLEVIAWAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGTRGRPPKAREDKPKAQTITNEKGKLL
Ga0311331_113859082	3300029954	Bog	MTQETVRALTDDQLVLVIAWAQGEQKLRAEKRKQETIAKIKELARSIDKSVRIEGTRGRPAGKKQGHA
Ga0302188_104333491	3300029986	Bog	MTEQNIKALSDSELEQVRAWTETEQKARAEKKKQDTIAKIRELAGSVGVAVKIDGA
Ga0311338_108077703	3300030007	Palsa	MTQETVKALSDSELVLVIDWAQAEQKARAEKRKQETIAKIRELAGAVGVTVAISGVR
Ga0302274_103367551	3300030041	Bog	VIAEQSIKALNDKELLEVIAWAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGTRGRPPKARE
Ga0311355_115507562	3300030580	Palsa	MTEDTVKALSDSELVLVIDWAQAEQKARAEKRKQETIAKIRELAGAVGVTVAISGVRGRPAKAD
Ga0311354_103093891	3300030618	Palsa	MTEDTVKALSDSELVLVIDWAQAEQKARAEKRKQETIAKIRELAGAVGVTVAISGVRGRP
Ga0311354_106268841	3300030618	Palsa	FPGRTNPDHGRGHGMTQEAIRALTDADLAQVILWGQAEVKARTERRKQETIAKIKELAEGVGVKVAISGQRGRPVAAKVPKPAKGKA
Ga0265745_10191212	3300030759	Soil	MTQDTVKALSDTELAQVIDWAQGEQKARTDRRKRETLAKIRELAQSVEVKVKVLGERGRPRKKHA
Ga0302308_103149773	3300031027	Palsa	MTQETVKALSDSELVLVIDWAQAEQKARAEKRKQETIAKIRELAGAVGVTVAISGVRGRPAK
Ga0265760_102003822	3300031090	Soil	MTQEAVKALSDTDLSQVITWAQDEVKTRTERRKQDAIAKIKALAAQVGVNVSIAGVRGRP
Ga0302325_100140622	3300031234	Palsa	MTREALMALSDSDLSEVMAWGEEERKARAEKRRQEAIAKIRELAGAVGVTVAIGGVRGRPARAKLDAKAAKKA
Ga0302325_116044472	3300031234	Palsa	MTQETVKALSDTDLSQVITWAQDEIKTRTERRKQDAIAKIKALAAQVGVCVSIAGVRGRPARTKPDAKPARAAV
Ga0302324_1010522062	3300031236	Palsa	MTQEAIRALTDGELSQVVAWAQVEIKARTERRKQETIAKIKELAGTVGVSVAIGGVRGRPVKSGHKPGQKG
Ga0302324_1011706561	3300031236	Palsa	MTQDTVKELGDAELEQVIDWAQGEQKARAEKRKRETIAKIKELAQTVGVSVNIAGTRGRPAKVNRLQQRA
Ga0302324_1019878532	3300031236	Palsa	MTLETVKALSDAELAQVVVWAQEEVKTRTERRRQEAIATIKSLAAQNNINISIAGLRGRPAGIRTDEKAEKPATTAKH
Ga0302324_1035478252	3300031236	Palsa	MTQETVKALSDVDLSQVITWAQEEIQTRTQRRKQEAIAKIKALAAQVGVSVSIAGVRGRPARIKTTSDNK
Ga0302318_106159022	3300031258	Bog	MTQETVKALSDTDLSQVITWAQEEIKTRTERRKQEAIAKIKALASQVGVSVSIEGVRGRPARIKPVAKPAKAAL
Ga0302326_110922321	3300031525	Palsa	MTQEAIRALTDADLAQVILWGQAEVKARTERRKQETIAKIKELAGGVGVKVAISGQRGRPLKGSSPKAKPE
Ga0310686_1141141374	3300031708	Soil	RGHGMTQEAIRALTDADLAQVILWGQAEVKARTERRKQETIAKIKELAGIVGVKVAIGGQRGRPVAAKALKPALRKV
Ga0310686_1177900582	3300031708	Soil	MTQDMVKALSDGELEQVITWTQDEQKARTARRKRETIARIKELAKVVGVSVNIAGVPGRPRTSKSRTGRSKSTA
Ga0310686_1179295132	3300031708	Soil	MTIETVRALSDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGAVGVSVAIGGARGRPVKAVKNETARP
Ga0310686_1189388335	3300031708	Soil	MTQDAIRALTDGELTQVVQWAQAEIKARTERRKQETIAKIKELAGAVGVSVAISGARGRPARGKGKPLLKG
Ga0310686_1190339521	3300031708	Soil	MTQEAIRALTDADLAQVILWGQAEVKARTERRKQETIAKIKELAGVVGVKVAISGQRGRPVAAKAQKPAKGKA
Ga0307474_105019031	3300031718	Hardwood Forest Soil	MTQETVRALSDGELAQIIAWGQEEVKARAEKRKRETIAKIKELAGAVGVSVIIDGQRGRPATGLAKTKALESERKVGNGRRLIED
Ga0311301_107840963	3300032160	Peatlands Soil	MTEQNIKALSDSELTEVIASAQDELKARAEKRRQETIAKIRELAGSVGVTVRIDGTRGRPPKAKEE
Ga0335078_108121252	3300032805	Soil	MTIETMRALSDADLSQVVAWAQAEIKARAEKRKQETIAKIKELAGAVGVSVSIGGQRGRPAKPAKSKGAR
Ga0335078_108619202	3300032805	Soil	MTQESVKALSDADLSQVIVWAQEEIKTRTERRKQEAIANIKALASQVGVSVSIAGTRGRPARIRTTTKAMKAG
Ga0335078_109198572	3300032805	Soil	MTQDTVRALSDSELGEVIAWAQGEQKARAEKRKQETIAKIRELAGSVGVSVTINGTRGRPPKAREDANGGKGRR
Ga0335074_1000332111	3300032895	Soil	MTLETVKALSDAELSQVITWAQDEVKTRTERRRQEAIATIKSLAAQNNLNVSIAGTRGRPAGTKPAGKAEKPPEPIRR
Ga0335074_101290351	3300032895	Soil	MTLETVKALSDVELSQVIAWAQDEIKTRTERRRQEAIATIKSLAAQNNLNISIAGVRGRPAGTKPGGKTEKPPETLRR
Ga0335072_100031078	3300032898	Soil	MTQESVKALSDGELAQVIAWAQDEQKARAENRKRETIAKIKEMAQAVGVSVSVGGARGRPPSAKKKAGSDK
Ga0335072_100345558	3300032898	Soil	MTQEAVKQLTDGELVQVITWAQAEQKERADRRKQETIAKIKQMAQAVGVSVNIEGARGRPKGARKPVRTELQD
Ga0335073_103973852	3300033134	Soil	MTQENIRALSDSELPQVIAWAQEEIRTRAENRKREAIAKIKALASQVGVSVSIAGVRGRPARIKPGIKPAKAQ
Ga0326728_1000525029	3300033402	Peat Soil	MTQESVKALSDADLSQVIVWAQEEIKTRTERRKQEAIAKIKALASQVGVSISIAGTRGRPARIRTATKTVKAG
Ga0326728_103847672	3300033402	Peat Soil	MTIETVRALSDGDLSQVVAWAQAEIKARAEKRKQETIAKIKELAGAVGVSVSIGGVRGRPAITTKRPQVKATSNR
Ga0334804_036775_27_245	3300033818	Soil	VTQETVRALSDVELSQVITWAQDEIKTRTERRKQEAIAKIKALALQVGVSVSIAGVRGRPARLKQVTKPTKA
Ga0334804_068002_597_875	3300033818	Soil	VRRKPSGRYSVIAEQSIKALNDKELLEVIAWAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGTRGRPPKAREDKPKAQTITNEKGKLL
Ga0334828_150177_368_538	3300033822	Soil	MTLETVKALSDAELSQVEVWVQDEKKSRSERRKEDAIAKIKALAESVGVKVAIGGVR
Ga0334840_129750_2_223	3300033824	Soil	MIAEQSIKALNDKELLEVIAWAEAEQKARAERRKQETIAKIRELAGSVGIAVRIDGTRGRPPKAREDKPKAQTS
Ga0334790_000136_7775_8005	3300033887	Soil	MTQETIKALSDSELPQVIIWAQEEIKSRTERRRQEAIAKIKTLAAENHISVAIGGVRGRPAKIKTPEKLDKPLKTA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048535

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences