Metagenome / Metatranscriptome Family F048514

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048514
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	87 residues
Representative Sequence	MRKFYVRPECDTGYGKGDGTSYENAWNGFKAVSWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV
Number of Associated Samples	119
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.41 %
% of genes near scaffold ends (potentially truncated)	29.73 %
% of genes from short scaffolds (< 2000 bps)	89.19 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.892 % of family members)
Environment Ontology (ENVO)	Unclassified (28.378 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.270 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.19% β-sheet: 11.50% Coil/Unstructured: 82.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF13477	Glyco_trans_4_2	49.32
PF08241	Methyltransf_11	14.19
PF03720	UDPG_MGDP_dh_C	5.41
PF13692	Glyco_trans_1_4	3.38
PF03721	UDPG_MGDP_dh_N	1.35
PF13439	Glyco_transf_4	1.35
PF05219	DREV	1.35
PF02543	Carbam_trans_N	1.35
PF13545	HTH_Crp_2	0.68
PF13360	PQQ_2	0.68
PF01370	Epimerase	0.68
PF13472	Lipase_GDSL_2	0.68
PF13579	Glyco_trans_4_4	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.35
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.35
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	1.35
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	1.35
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	1.35
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	1.35

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.19 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	34.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.35 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	34.46 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	34.46 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	2.70 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	34.46 %
unclassified Xanthomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae	2.70 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	34.46 %
Xanthomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	2.70 %
Methylobacterium nodulans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	0.68 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10044068	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300002562\|JGI25382J37095_10275952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300002568\|C688J35102_120204234	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300002906\|JGI25614J43888_10004640	All Organisms → cellular organisms → Bacteria	4371	Open in IMG/M
3300002908\|JGI25382J43887_10322721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	664	Open in IMG/M
3300003693\|Ga0032354_1047546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	565	Open in IMG/M
3300003693\|Ga0032354_1129633	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300004153\|Ga0063455_100045746	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300004157\|Ga0062590_100188172	All Organisms → cellular organisms → Bacteria → Proteobacteria	1474	Open in IMG/M
3300004463\|Ga0063356_101894587	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300004463\|Ga0063356_102311892	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300004643\|Ga0062591_100668035	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300005166\|Ga0066674_10216331	All Organisms → cellular organisms → Bacteria → Proteobacteria	912	Open in IMG/M
3300005167\|Ga0066672_10468671	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300005171\|Ga0066677_10433362	All Organisms → cellular organisms → Bacteria → Proteobacteria	752	Open in IMG/M
3300005179\|Ga0066684_10465107	All Organisms → cellular organisms → Bacteria → Proteobacteria	850	Open in IMG/M
3300005181\|Ga0066678_10267302	All Organisms → cellular organisms → Bacteria → Proteobacteria	1110	Open in IMG/M
3300005186\|Ga0066676_10943001	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300005186\|Ga0066676_10945875	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300005336\|Ga0070680_100052507	All Organisms → cellular organisms → Bacteria → Proteobacteria	3327	Open in IMG/M
3300005435\|Ga0070714_100117630	All Organisms → cellular organisms → Bacteria → Proteobacteria	2361	Open in IMG/M
3300005436\|Ga0070713_100611247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1036	Open in IMG/M
3300005440\|Ga0070705_100677622	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300005447\|Ga0066689_11019821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	509	Open in IMG/M
3300005451\|Ga0066681_10274075	All Organisms → cellular organisms → Bacteria → Proteobacteria	1028	Open in IMG/M
3300005454\|Ga0066687_10570696	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300005468\|Ga0070707_100668204	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300005518\|Ga0070699_100023097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5359	Open in IMG/M
3300005518\|Ga0070699_102107932	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300005536\|Ga0070697_101733004	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300005536\|Ga0070697_101963201	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300005537\|Ga0070730_10118011	All Organisms → cellular organisms → Bacteria → Proteobacteria	1821	Open in IMG/M
3300005544\|Ga0070686_100577286	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300005546\|Ga0070696_100092488	All Organisms → cellular organisms → Bacteria → Proteobacteria	2155	Open in IMG/M
3300005552\|Ga0066701_10674618	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300005560\|Ga0066670_10917951	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300005566\|Ga0066693_10337922	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300005578\|Ga0068854_102257324	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300005615\|Ga0070702_100896969	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300005615\|Ga0070702_101456334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	562	Open in IMG/M
3300006031\|Ga0066651_10795687	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300006032\|Ga0066696_10532422	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300006032\|Ga0066696_10566498	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300006046\|Ga0066652_101417136	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300006173\|Ga0070716_100389978	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300006755\|Ga0079222_10384406	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300006755\|Ga0079222_11235037	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300006755\|Ga0079222_11762268	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300006796\|Ga0066665_10259164	All Organisms → cellular organisms → Bacteria → Proteobacteria	1380	Open in IMG/M
3300006797\|Ga0066659_11379271	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300006804\|Ga0079221_11547437	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300006852\|Ga0075433_10187581	All Organisms → cellular organisms → Bacteria → Proteobacteria	1840	Open in IMG/M
3300006854\|Ga0075425_100324020	All Organisms → cellular organisms → Bacteria → Proteobacteria	1774	Open in IMG/M
3300006904\|Ga0075424_102118056	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006914\|Ga0075436_100376856	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300006954\|Ga0079219_12384837	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300007255\|Ga0099791_10150822	All Organisms → cellular organisms → Bacteria → Proteobacteria	1085	Open in IMG/M
3300009012\|Ga0066710_100547972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1749	Open in IMG/M
3300009012\|Ga0066710_102107479	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300009143\|Ga0099792_10103780	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300009147\|Ga0114129_11089613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1001	Open in IMG/M
3300009147\|Ga0114129_11807412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	743	Open in IMG/M
3300009162\|Ga0075423_10060619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3914	Open in IMG/M
3300010320\|Ga0134109_10250668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	667	Open in IMG/M
3300010333\|Ga0134080_10155812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	971	Open in IMG/M
3300010364\|Ga0134066_10087895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	879	Open in IMG/M
3300010364\|Ga0134066_10122306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	784	Open in IMG/M
3300010400\|Ga0134122_10276352	All Organisms → cellular organisms → Bacteria → Proteobacteria	1431	Open in IMG/M
3300010400\|Ga0134122_11430673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	707	Open in IMG/M
3300010401\|Ga0134121_10030537	All Organisms → cellular organisms → Bacteria → Proteobacteria	4366	Open in IMG/M
3300010401\|Ga0134121_10074579	All Organisms → cellular organisms → Bacteria → Proteobacteria	2810	Open in IMG/M
3300011270\|Ga0137391_10561442	All Organisms → cellular organisms → Bacteria → Proteobacteria	961	Open in IMG/M
3300012202\|Ga0137363_11004028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	709	Open in IMG/M
3300012203\|Ga0137399_10106250	All Organisms → cellular organisms → Bacteria → Proteobacteria	2181	Open in IMG/M
3300012203\|Ga0137399_10805802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	791	Open in IMG/M
3300012205\|Ga0137362_10279082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1445	Open in IMG/M
3300012205\|Ga0137362_10647233	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300012206\|Ga0137380_11628797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	530	Open in IMG/M
3300012208\|Ga0137376_10694061	All Organisms → cellular organisms → Bacteria → Proteobacteria	878	Open in IMG/M
3300012212\|Ga0150985_106849721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300012360\|Ga0137375_10959821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	675	Open in IMG/M
3300012361\|Ga0137360_11391853	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300012362\|Ga0137361_11118861	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300012469\|Ga0150984_103208862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	776	Open in IMG/M
3300012469\|Ga0150984_114931272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1061	Open in IMG/M
3300012469\|Ga0150984_117287454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	713	Open in IMG/M
3300012469\|Ga0150984_123226856	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300012685\|Ga0137397_10407689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1012	Open in IMG/M
3300012685\|Ga0137397_10556405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	854	Open in IMG/M
3300012917\|Ga0137395_11028716	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012918\|Ga0137396_10270560	All Organisms → cellular organisms → Bacteria → Proteobacteria	1255	Open in IMG/M
3300012922\|Ga0137394_10267931	All Organisms → cellular organisms → Bacteria → Proteobacteria	1461	Open in IMG/M
3300012922\|Ga0137394_10395425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium nodulans	1178	Open in IMG/M
3300012927\|Ga0137416_12023592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	528	Open in IMG/M
3300012944\|Ga0137410_10906854	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300012951\|Ga0164300_10820439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	579	Open in IMG/M
3300012958\|Ga0164299_10615367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	745	Open in IMG/M
3300012958\|Ga0164299_11040865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	607	Open in IMG/M
3300012960\|Ga0164301_11612174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	539	Open in IMG/M
3300012961\|Ga0164302_11274297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	592	Open in IMG/M
3300012986\|Ga0164304_11009434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	659	Open in IMG/M
3300012987\|Ga0164307_10323935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1108	Open in IMG/M
3300013307\|Ga0157372_13070787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	533	Open in IMG/M
3300015079\|Ga0167657_1000364	All Organisms → cellular organisms → Bacteria → Proteobacteria	12238	Open in IMG/M
3300015245\|Ga0137409_10515230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300015372\|Ga0132256_100775827	All Organisms → cellular organisms → Bacteria → Proteobacteria	1075	Open in IMG/M
3300015374\|Ga0132255_105608326	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300018433\|Ga0066667_10977691	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300018433\|Ga0066667_11106302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	686	Open in IMG/M
3300018465\|Ga0190269_11552729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	549	Open in IMG/M
3300018468\|Ga0066662_10201616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1574	Open in IMG/M
3300018482\|Ga0066669_10719797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	880	Open in IMG/M
3300020202\|Ga0196964_10018334	All Organisms → cellular organisms → Bacteria	2889	Open in IMG/M
3300020202\|Ga0196964_10136374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1104	Open in IMG/M
3300020215\|Ga0196963_10021021	All Organisms → cellular organisms → Bacteria → Proteobacteria	2809	Open in IMG/M
3300021057\|Ga0196981_1060362	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300021953\|Ga0213880_10038354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1136	Open in IMG/M
3300024330\|Ga0137417_1010453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1109	Open in IMG/M
3300025912\|Ga0207707_10118457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2314	Open in IMG/M
3300025917\|Ga0207660_10034768	All Organisms → cellular organisms → Bacteria → Proteobacteria	3494	Open in IMG/M
3300025922\|Ga0207646_10574366	All Organisms → cellular organisms → Bacteria → Proteobacteria	1013	Open in IMG/M
3300026142\|Ga0207698_11662347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	654	Open in IMG/M
3300026300\|Ga0209027_1172206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	715	Open in IMG/M
3300026304\|Ga0209240_1008632	All Organisms → cellular organisms → Bacteria → Proteobacteria	3850	Open in IMG/M
3300026312\|Ga0209153_1170584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	789	Open in IMG/M
3300026313\|Ga0209761_1321114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	529	Open in IMG/M
3300026524\|Ga0209690_1124043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1011	Open in IMG/M
3300026538\|Ga0209056_10430764	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300026550\|Ga0209474_10103468	All Organisms → cellular organisms → Bacteria	1913	Open in IMG/M
3300026550\|Ga0209474_10174916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1384	Open in IMG/M
3300027857\|Ga0209166_10103306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1589	Open in IMG/M
3300027903\|Ga0209488_10042643	All Organisms → cellular organisms → Bacteria	3327	Open in IMG/M
3300027903\|Ga0209488_11091505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	545	Open in IMG/M
3300031562\|Ga0310886_10369799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	838	Open in IMG/M
3300031720\|Ga0307469_11062618	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300031720\|Ga0307469_12504603	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031740\|Ga0307468_100178073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1407	Open in IMG/M
3300031740\|Ga0307468_100473417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	984	Open in IMG/M
3300031820\|Ga0307473_10530980	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300031854\|Ga0310904_10369132	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300031908\|Ga0310900_10653484	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300031911\|Ga0307412_10647768	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300031944\|Ga0310884_10376953	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300032002\|Ga0307416_101749512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	726	Open in IMG/M
3300032174\|Ga0307470_11496824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	561	Open in IMG/M
3300032180\|Ga0307471_103844598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	531	Open in IMG/M
3300032205\|Ga0307472_100809247	All Organisms → cellular organisms → Bacteria → Proteobacteria	857	Open in IMG/M
3300032205\|Ga0307472_101878601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.46%
Host-Associated	Host-Associated	15.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.46%
Plants	Host-Associated → Plants	15.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.05%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.89%
Loam	Environmental → Terrestrial → Soil → Loam	14.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.73%
Sand	Environmental → Terrestrial → Soil → Sand	2.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.35%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.70%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.35%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	2.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.35%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.35%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003693	Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021057	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3_20-13C	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_100440681	3300001305	Soil	NGFQSVNWQALAGQPATLWVCGEPGGPGGFVTLHVEWSYLKSRPEIQVASENKTRTDPRREPALAI*
JGI25382J37095_102759522	3300002562	Grasslands Soil	MRTFYVRPESDRGYGKGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV*
C688J35102_1202042342	3300002568	Soil	MIRTFYVRPECVAGYGRGDGSSYQNAWNGFESVDWQALAGQPATLWVCGAPGGPGGFVTLHVEWSYLDNPNKLNEIPTRPHTRRESPVSV*
JGI25614J43888_100046405	3300002906	Grasslands Soil	MRTFYVRPESDTGYGRGDGTSYENAWNGFKAVSWEALSGAPATLWVCGGPEGPAGFVTLHVEWSYLKANDGETRPHPRRESPIAV*
JGI25382J43887_103227212	3300002908	Grasslands Soil	MRTFYVRPESDRGYGKGDGTSYEHAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARQARPHPRRESPIAV*
Ga0032354_10475462	3300003693	Avena Fatua Rhizosphere	MRTFYVRPDCDAGYGRGDGSSYEHAWNGFKSVCWEALSGEPATLWVCGDPAGPGGFVTLHVEWSYLKTSPEAALAGAEPKAEPKPEPKAE
Ga0032354_11296332	3300003693	Avena Fatua Rhizosphere	MIRTFYVRPHAAEGYGKGDGSSYENAWNGFQSVNWQALAGQPATLWVCGEPGGPGGFVTLHVEWSYLKSRPEIQVASENKTRTDPRREPALAI*
Ga0063455_1000457463	3300004153	Soil	MIRTFYVRPECVAGYGRGDGSSYENAWNGFESVDWQALAGQPATLWVCGAPGGPGGFVTLHVEWSYLDNPNKLNEIPTRPHTRRESPVSV*
Ga0062590_1001881723	3300004157	Soil	MIRIFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHTRRESAVPV*
Ga0063356_1018945871	3300004463	Arabidopsis Thaliana Rhizosphere	MIRTFYVRPESAAGYGKGDGSSYENAWNGFKSVDWNALAGAPATLWVCGEAGGPGGFVTLHIEWSYLQSGPEINVEPQAKTRINSRRES
Ga0063356_1023118921	3300004463	Arabidopsis Thaliana Rhizosphere	MIRTFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNHSNAIEPHEIAARPHTRRES
Ga0062591_1006680353	3300004643	Soil	MIRIFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHTRRESA
Ga0066674_102163312	3300005166	Soil	MRTFYVRPERDTGYGRGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGDDVQARPNTRRESPIAV*
Ga0066672_104686712	3300005167	Soil	MRTFYVRPASDKGYGKGDGTSYENAWNGFKAVSWDALAGEPATLWVCGGPQGPAGFVTLHVEWSYLKGDDVQARPNTRRESPIAV*
Ga0066677_104333622	3300005171	Soil	MRTFYVRPACDAGYGRGDGTSYDNAWNGFESVDWQALAGEPATLWACGGRGDPGGFVILCVEWSYLKNHGLPARTDPRRESPVAV*
Ga0066684_104651071	3300005179	Soil	MRKFYVRPECDAGYGKGDGTSYANAWNGFRAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0066678_102673022	3300005181	Soil	MRTFYVRPERDTGYGRGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV*
Ga0066676_109430011	3300005186	Soil	GYGKGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV*
Ga0066676_109458752	3300005186	Soil	AGYGKGDGTSYANAWNGFKAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0070680_1000525073	3300005336	Corn Rhizosphere	MIRTFYVRPDCACGYGNGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNNTVKNDEIPARPHTRREPAVAV*
Ga0070714_1001176303	3300005435	Agricultural Soil	MRIYYVRPQCDTGYGSGDGSSYENAWNGFKSVDWDALAGEPATLWVCGDPGGPGGFVTLHVEWSYLKTRPETALAPEREAKADPHPRREPAVAV*
Ga0070713_1006112472	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFYVRPECDTGYGKGDGTSYANAWNGFKAVDWNVLRAEPATLWVCGESVADAPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0070705_1006776222	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VRTFYIRPECDAGYGSGDGTSYDNAWNGFKAVNWDALRGGPATVWVCGGAESMATGPAGFITLHVEWSYLKANDREARPDPRRESPIAV
Ga0066689_110198211	3300005447	Soil	MRKFYVRPECDTGYGKGDGTSYDNAWNGFKSVKWEVLRGAPATLWVCGGPESMSTGPTGFVTLHVEWSYLKANEREARPDPRRESPLAV*
Ga0066681_102740752	3300005451	Soil	MSKRIFYVRPDSAEGYGQGDGSSYENAWNGFKSVDWDALAGTPATLWVCGDPGGPGGFVTLHVEWSYLKSSPEAAVAPESQTRTNTRRESPVPV*
Ga0066687_105706962	3300005454	Soil	MRKFYVRPECDAGYGKGDGTSYANAWNGFKAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0070707_1006682042	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFYVRPECDTGYGKGDGSSYANAWNGFKAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARTDPRRESPLAV*
Ga0070699_1000230974	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFYVRPDCASDYGKGDGTSYEDAWNGFKSVNWAALAGAPATLWVCGDAGGPGGFVTLHVEWSYLKSHPLAPIARDVQARSSTRRESPVAL*
Ga0070699_1021079322	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PQRPSKMIRTFYVRPEGPAGYGKGDGTSYENAWNGFKSVDWSALAGQPATLWVCGGPGGPGGFVTLHVEWSYLQSAPVLNEAQARPHTRRESPVPV*
Ga0070697_1017330042	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRTFYVRPECDAGYGKGDGTSYDNAWNGFKAVNWDALAGAPATLWVCGGPAGPAGFITLHVEWSYLKAHDGEARPHPRRESPIAV*
Ga0070697_1019632011	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	YYVRPQCDTGYGSGDGSSYENAWNGFKSVDWDALAGEPATLWVCGDPGGPAGFVTLHVEWSYLKTRPETALAPEREAKADPHPRREPAVAV*
Ga0070730_101180112	3300005537	Surface Soil	MRKFYVRPECDTGYGKGDGTSYDNAWNGFKSVNWDALRGAPATLWVCGGPDSMTAGPAGFVTLHIEWSYLKSNEREARTDPRRESALPV*
Ga0070686_1005772862	3300005544	Switchgrass Rhizosphere	MRKFYVRPECDTGYGRGDGTSYENAWNGFKSVRWEALAGAPATLWVCGGAEGPAGFVTLHVEWSYLKSNEREARTDPRRESPLAV*
Ga0070696_1000924881	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VRTFYIRPECDAGYGSGDGTSYDNAWNGFKAVNWDALRGGPATVWVCGGAESMATGPAGFITLHVEWSYLKANDREARPDPRRESP
Ga0066701_106746182	3300005552	Soil	MRTFYVRPESDRGYGKGDGTSYEHAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGND
Ga0066670_109179511	3300005560	Soil	RPECDTGYGKGDGTSYANAWNGFKAVDWSVLRAEPATLWVCGESVADAPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0066693_103379222	3300005566	Soil	MRKFYVRPECDAGYGKGDGTSYANAWNGFQAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0068854_1022573242	3300005578	Corn Rhizosphere	MIRTFYVRPDCACGYGNGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHTRRESAVPV*
Ga0070702_1008969692	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFYVRPECDTGYGRGDGTSYENAWNGFKSVKWEALAGAPATLWVCGGAEGPAGFVTLHVEWSYLKSNEREARTDPRRESPLPV*
Ga0070702_1014563342	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFYVRPECDTGYGKGDGSSYANAWNGFKAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0066651_107956872	3300006031	Soil	MRKFYVRPECDTGYGKGDGTSYENAWNGFKAVSWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV*
Ga0066696_105324222	3300006032	Soil	MRIFYVRPDCTPDYGKGDGTSYENAWNGFKSVNWAALAGAPATLWVCGDPGGPGGFVTLHVEWSYLKSRPLVAVVREAQARPNTRRESPVAL*
Ga0066696_105664982	3300006032	Soil	MRTFYVRPESDRGYGKGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGDDVQARPHTRRESPIAV*
Ga0066652_1014171362	3300006046	Soil	MIRTFYVRPETPSGYGKGDGTSYEHAWNGFQSVNWQALAGQPATLWVCGEPGGPGGFVTLHVEWSYLQSRPEISVATENKTRTDPRREPALAV*
Ga0070716_1003899782	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRIYYVRPQCDTGYGSGDGSSYENAWNGFKSVDWAALAGEPATLWVCGDPGGPGGFVTLHVEWSYLKTRPETALAPEREAKADPHPRREPAVAV*
Ga0079222_103844062	3300006755	Agricultural Soil	MIRIFYVRPDCASGYGMGDGSSYENAWNGFRSVDWNALAGQPATLWVCGAPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHTRRESPVPV*
Ga0079222_112350372	3300006755	Agricultural Soil	MRTYYVRPQCDTGYGSGDGSSYENAWNGFKSVNWDALAGEPATLWVCGDPGGPGGFVTLHVEWSYLKTSPEAALAAAEPAAEPKAEAKARPHTRRESPVAV*
Ga0079222_117622682	3300006755	Agricultural Soil	MRQFYVRPECDTGYGKGDGTSYANAWNGFKAVDWSVLHGEPSTLWVCGESSANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0066665_102591641	3300006796	Soil	MRTFYVRPESDRGYGKGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGDDVQARPNTRRESP
Ga0066659_113792712	3300006797	Soil	MRKFYVRPECDTGYGKGDGTSYDNAWNGFKSVKWEVLRGAPATLWVCGGPESMSTGPTGFVTLHVEWSYLK
Ga0079221_115474372	3300006804	Agricultural Soil	MRKFYVRPACDRGYGQGDGTSYENAWNGFESVNWEALAGEPATLWVCGDPAGPGGFVTLHVEWSYLNSRPEAALAAEPKARTHPRRESPVAV*
Ga0075433_101875812	3300006852	Populus Rhizosphere	MRKFYVRPECDTGYGKGDGTSYANAWNGFKSVDWSVLHGEPSTLWVCGESSANGPTGFVTLHIEWSYLKANEREARTDPRRESPLAV*
Ga0075425_1003240202	3300006854	Populus Rhizosphere	MRIFYVRPDCTPGYGKGDGTSYENAWNGFKSVNWAALAGTPATLWVCGDPGGPGGFVTLHVEWSYLKSRPLVAVVREAQARPNTRRESPVAL*
Ga0075424_1021180561	3300006904	Populus Rhizosphere	MRKFYVRPECDTGYGKGDGTSYANAWNGFKAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREAR
Ga0075436_1003768562	3300006914	Populus Rhizosphere	PGYGKGDGTSYENAWNGFKSVNWAALAGTPATLWVCGDPGGPGGFVTLHVEWSYLKSRPLVAVVREAQARPNTRRESPVAL*
Ga0079219_123848372	3300006954	Agricultural Soil	PECDTGYGKGDGTSYANAWNGFKAVDWSVLHGEPSTLWVCGESSANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0099791_101508222	3300007255	Vadose Zone Soil	MRTFYVRPASDKGYGKGDGTSYENAWNGFKAVSWDALAGEPATLWVCGGPDSMTAGPAGFVTLHVEWSYLKGDDVQARPNTRRESPIAV*
Ga0066710_1005479723	3300009012	Grasslands Soil	MRTFYVRPERDTGYGRGDGTSYEHAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGDDVQARPNTRRESPIAV
Ga0066710_1021074792	3300009012	Grasslands Soil	MRTFYVRPECDTGYGRGDGSSYDNAWNGFKSVNWDALRGAPATIWVCGGPESMATGPSGFITLHVEWNYLKSANDGEARPYP
Ga0099792_101037802	3300009143	Vadose Zone Soil	MRTFYVRPESDTGYGRGDGTSYENAWNGFKAVSWEALSGAPATLWVCGGPEGPAGFVTLHVEWSYLKANDGETHPHPRRESPIAV*
Ga0114129_110896132	3300009147	Populus Rhizosphere	MRTFYVRPESDAGYGRGDGTSYEHAWNGFKAVKWDALSGEPATLWVCGGPEGPAGFVTLHVEWSYLKGDDVQARPHTRRESPITV*
Ga0114129_118074122	3300009147	Populus Rhizosphere	MIRTFYVRPDSSTGYGTGDGSSYENAWNGFKSVKWEALAGQPATLWVCGEAGGPGGFVTLHVEWSYLKSHPEIQVAPAPEAKTRTHTRRESPVTV*
Ga0075423_100606193	3300009162	Populus Rhizosphere	MRKFYVRPECDTGYGKGDGTSYANAWNGFKSVDWSVLHGEPSTLWVCGESSANGPTGFVTLHIEWSYLKANEREAHTDPRRESPLAV*
Ga0134109_102506682	3300010320	Grasslands Soil	MRKFYVRPECDAGYGKGDGTSYANAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHTRRESPIAV*
Ga0134080_101558122	3300010333	Grasslands Soil	MRTFYVRPESDRGYGKGDGTSYENAWNGFKAVNWDALAGEPAKLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV*
Ga0134066_100878952	3300010364	Grasslands Soil	MRTFYVRSDCDAGYGRGDGSSYEHAWNGFKSVCWAALSGEPATLWVCGDPAGPGGFVTLHVEWSYLKTSPEAALAAAEPKAEPKTDSKAEPKARPHTRRESPVAV*
Ga0134066_101223062	3300010364	Grasslands Soil	MRKFYVRPECDTGYGRGDGTSYDNAWNGFKSVQWDALAGVPATLWVCGGAEGPAGFVTLHVEWSYLKSNELEARTDPRRESPVAV*
Ga0134122_102763523	3300010400	Terrestrial Soil	VRTFYIRPECDAGYGSGDGTSYDNAWNGFKAVNWDALRGGPATVWVCGGAESMATGPAGFITLHVEWSYLKANDREARPDPRRESPIAV*
Ga0134122_114306731	3300010400	Terrestrial Soil	AGYGKGDGTSYENAWNGFKSVNWQALAGEPATLWVCGEPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHTRRESAVPV*
Ga0134121_100305372	3300010401	Terrestrial Soil	MRKFYVRPECDTGYGKGDGTSYANAWNGFKAVDWSVLHGEPSTLWVCGESSANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV*
Ga0134121_100745793	3300010401	Terrestrial Soil	MRTFYVRPDSDSGYGRGDGSSYEHAWNGFKSVKWEALAGEPATLWVCGDPERPGGFVTLHVEWSYLKTSPEAALAAAEPTAEAKARPHTRRESTVAV*
Ga0137391_105614422	3300011270	Vadose Zone Soil	MRTFYVRPERDTGYGRGDGTSYENAWNGFKAVSWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV*
Ga0137363_110040281	3300012202	Vadose Zone Soil	MRKFYVRPECDTGYGKGDGTSYENAWNGFKAVSWEALSGAPATLWVCGGPEGPAGFVTLHVEWSYLKANDGETRPHPRRESPIAV*
Ga0137399_101062502	3300012203	Vadose Zone Soil	MRTFYVRPECDAGYGTGDGTSYDNAWNGFKAVNWEALRGAPATVWVCGGPESMATGPGGFITLHIEWSYLKANDGEARPYPRRESSIAV*
Ga0137399_108058021	3300012203	Vadose Zone Soil	TSYENAWNGFKAVNWDALAGEPATLWVCGGPDSMTAGPAGFVTLHVEWSYLKGDDLQARPDTRRESPIAV*
Ga0137362_102790822	3300012205	Vadose Zone Soil	MRKFYVRPECDTGYGKGDGTSYDNAWNGFKSVNWDALAGAPATLWVCGGPDSMTAGPAGFITLHVEWSYLKSNEREARPDTRRESPLAV*
Ga0137362_106472332	3300012205	Vadose Zone Soil	MRTFYVRPASDKGYGKGDGTSYENAWNGFKAVNWDALSGEPATLWVCGGPEGPAGFVTLHVEWSYLKGDDVQARPDTRRESAIAV*
Ga0137380_116287971	3300012206	Vadose Zone Soil	MRTFYVRPESDRGYGKGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRARQAGRS
Ga0137376_106940611	3300012208	Vadose Zone Soil	MRTFYVRPQRDTGYGRGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV*
Ga0150985_1068497211	3300012212	Avena Fatua Rhizosphere	MRKYYVRPECDTGYGRGDGTSYDNAWNGFKSVNWDVLSGAPATLWVCGGAEGPAGFVTLHVEWSYLKSNEREARTD
Ga0137375_109598212	3300012360	Vadose Zone Soil	IRTYYVRPECPTGHGKGDGTSYENAWNGFGAVNWDALAGEPATLWVCGDPGGPGGFVTLHVEWSYINSRPETSVVGEAKARPNTRRESPVAV*
Ga0137360_113918531	3300012361	Vadose Zone Soil	MRTFYVRPESDRGYGKGDGTSYENAWNGFKAVSWDALAGEPATLWVCGGPQGPAGFVTLHVEWSYLKGDDVQARPDTRRESAIAV*
Ga0137361_111188612	3300012362	Vadose Zone Soil	MRKFYVRPECDTGYGKGDGTSYDNAWNGFKSVNWDALAGAPATLWVCGGPDSMTAGPAGFITLHVEWSYLKSNEREARPDTRRESAIAV*
Ga0150984_1032088622	3300012469	Avena Fatua Rhizosphere	MLTFYVRPDSDAGYGRGDGSSYEHAWNGFKSVQWQALAGEPATLWVCGDPEGPGGFVTLHVEWSYLKTSPENALAAAQPKPEPKPEAKARPHTRRESAVAV*
Ga0150984_1149312721	3300012469	Avena Fatua Rhizosphere	SYENAWNGFKSVNWQTLAGQPATLWVCGEPGGPGGFVTLHVEWSYLQASNAMHRPEESVVPESVSPEAKARINSRRESPVAV*
Ga0150984_1172874542	3300012469	Avena Fatua Rhizosphere	MMRTFYVRPDCDAGYGRGDGSSYEHAWNGFKSVKWEALSGEPATLWVCGDPGGPGGFVTLHVEWSYLKTSPEAALAVAEPKAEARPEPKAEPKARPHTRRESPVAV*
Ga0150984_1232268561	3300012469	Avena Fatua Rhizosphere	SNTMRKYYVRPECDTGYGRGDGTSYDNAWNGFKSVNWDVLSGAPATLWVCGGAEGPAGFVTLHVEWSYLKSNEREARTDPRRESPLPV*
Ga0137397_104076892	3300012685	Vadose Zone Soil	MRTFYVRPASDKGYGKGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPQGPAGFVTLHVEWSYLKGDDVQARPNTRRESPIAV*
Ga0137397_105564052	3300012685	Vadose Zone Soil	VRPECGTCYGKGDGTSYANAWNGFKAVDWSVLRAEPATLWVCGESMANGPTGFVTLHIEWSYLKENEREARTDPRRESPLAV*
Ga0137395_110287162	3300012917	Vadose Zone Soil	GDGTSYDNAWNGFKSVKWDALAGAPATLWVCGGAEGPAGFVTLHVEWSYLKSNELEARTDPRRESPVAV*
Ga0137396_102705602	3300012918	Vadose Zone Soil	MRTFYVRPASDKGYGKGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPDSMTAGPAGFVTLHVEWSYLKGDDVQARPNTRRESPIAV*
Ga0137394_102679313	3300012922	Vadose Zone Soil	MRTFYVRPESDAGYGRGDGTSYDNAWNGFKAVNWDALAGEPATLWVCGGPESMTAGPAGFVTLHVEWSYLKGDDIQARPHTRRESPIAV*
Ga0137394_103954252	3300012922	Vadose Zone Soil	MRTFYVRPECDAGYGQGDGTSYDNAWNGFKAVNWEALRGAPATVWVCGGPESMATGPGGFITLHIEWSYLKANDGEARPYPRRESSIAV*
Ga0137416_120235921	3300012927	Vadose Zone Soil	MRKFYVRPECDTGYGRGDGTSYDNAWNGFKSVKWDALAGAPATLWVCGGAEGPAGFVTLHVEWSYLKSNELEARTDPRRESPVAV*
Ga0137410_109068541	3300012944	Vadose Zone Soil	MRTFYVRPESDTGYGRGDGTSYENAWNGFKAVSWEALSGAPATLWVCGGPEGPAGFVTLHVEWSYLKANDGEARPHPRRESPIAV*
Ga0164300_108204392	3300012951	Soil	DQVMRTFYVRPDSDSGYGRGDGSSYEHAWNGFKSVKWEALAGEPATLWVCGDPERPGGFVTLHVEWSYLKTSPEAALAAAEPTAEAKARPHTRRESTVAV*
Ga0164299_106153671	3300012958	Soil	MRTFYVRPDSDSGYGRGDGSSYEHAWNGFKSVTWEALAGEPATLWGCGDPEGPGGFVTLHVEWSYLKTSPEAALVAAEPKAEPKARPHTR
Ga0164299_110408652	3300012958	Soil	MIRTFYVRPDCACGYGKGDGTSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHTRRESAVPV*
Ga0164301_116121742	3300012960	Soil	MRTFYVRPDSDSGYGRGDGSSYEHAWNGFKSVKWEALAGEPATLWVCGDPEGPGGFVTLHVEWSYLKTSPEAALAAAEPTAEAKARPHTRRESTVAV*
Ga0164302_112742972	3300012961	Soil	MIRIFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNKSNAIEPHEIAARPHTRRESAVPV*
Ga0164304_110094341	3300012986	Soil	VRPECDTGYGKGDGSSYANAWNGFKAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARTDPRRESPLAV*
Ga0164307_103239352	3300012987	Soil	MRKFYVRPECDAGYGKGDGTSYANAWNGFKAVDWDLLRSGPATLWLCGESTTTAPTGFVTVHIEWSYLKENEREARTDPRRESPLAV*
Ga0157372_130707872	3300013307	Corn Rhizosphere	MIRTFYVRPDCACGYGKGDGTSYENAWNGFRSVNWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNNTVKNDEIPARPHTRREPAVAV*
Ga0167657_10003643	3300015079	Glacier Forefield Soil	MRKFYVRPECDTGYGRGDGTSYENAWNGFKSVNWNALAGAPATLWVCGGAGGPAGFVTLHVEWSYLKSNELEARTDPRRESPIAV*
Ga0137409_105152302	3300015245	Vadose Zone Soil	MRTFYVRPESDTGYGRGDGTSYDNAWNGFKAVSWEALSGAPATLWVCGGPEGPAGFVTLHVEWSYLKANDGEARPHPRRESPIAV*
Ga0132256_1007758271	3300015372	Arabidopsis Rhizosphere	MIRTFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNHSNAIEPHEIAARPHTRRESPVPV*
Ga0132255_1056083262	3300015374	Arabidopsis Rhizosphere	RQVPAGGDQVGVRTFYVRPECDAGYGTGDGTSYDNAWNGFKAVNWNALAGGPATVWVCGGAEGPGGFITLHVEWSYLKANDREARPDPRRESSIAV*
Ga0066667_109776912	3300018433	Grasslands Soil	MRTFYVRPERDTGYGRGDGTSYENAWNGFKAVSWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGDDVQARPNTRRESPIAV
Ga0066667_111063022	3300018433	Grasslands Soil	MRKFYVRPECDTGYGKGDGTSYDNAWNGFKSVRWEVLRGAPATLWVCGGPESMSTGPTGFVTLHVEWSYLKANEREARPDPRRESPLAV
Ga0190269_115527292	3300018465	Soil	MTIRTFYVRPERMQGYGRGDGTTYESAWNGFKAVDWSALAGQPATLWVCGEPGGPGGFVSLHVEWSYLSKNDVEVEARPNTRREPALAV
Ga0066662_102016162	3300018468	Grasslands Soil	MRKFYVRPECDTGYGKGDGTSYANAWNGFKAVDWSVLRAEPATLWVCGESVADAPTGFVTLHIEWSYLKANEREARPDPRRESPLAV
Ga0066669_107197972	3300018482	Grasslands Soil	GKGDGTSYANAWNGFQAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV
Ga0196964_100183341	3300020202	Soil	GLGKGDGSTYENAWNGFRAVNWDALSGAPATLWVCGEPGGPGGFVTLHVEWSYLKANDVEVEARTDPRREPALAV
Ga0196964_101363742	3300020202	Soil	MIRTFYVRPERPQGYGKGDGTSYENAWNGFKSVNWDALAGQPATLWVCGDPGGPGGFVTLHVEWSYLKANEEIEARPHTRREPALAV
Ga0196963_100210214	3300020215	Soil	MTIRTFYVRPERPQGYGKGDGSTYENAWNGFRAVNWDALAGAPATLWVCGEPGGPGGFVTLHVEWSYLKANDVEVEARTDPRREPALAV
Ga0196981_10603621	3300021057	Soil	GKGDGTSYENAWNGFKSVNWDALAGQPATLWVCGDPGGPGGFVTLHVEWSYLKANEEIEARPHTRREPALAV
Ga0213880_100383542	3300021953	Exposed Rock	MRKFYVRPECDAGYGKGDGTSYANAWNGFKAVDWNVLRAEPATLWVCGEPTSSGPTGFVTLHIEWSYLKENEREARTDPRRESPLAV
Ga0137417_10104532	3300024330	Vadose Zone Soil	MRTFYVRPECDAGYGQGDGTSYDNAWNGFKAVNWEALRGAPATVWVCGGPESMATGPGGFITLHIEWSYLKANDGEARPYPRRESSIAV
Ga0207707_101184572	3300025912	Corn Rhizosphere	MIRTFYVRPDCACGYGNGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNNTVKNDEIAARPHTRREPAVAV
Ga0207660_100347683	3300025917	Corn Rhizosphere	MIRTFYVRPDCACGYGNGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNNTVKNDEIPARPHTRREPAVAV
Ga0207646_105743662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRKFYVRPECDTGYGKGDGSSYANAWNGFKAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARTDPRRESPLAV
Ga0207698_116623472	3300026142	Corn Rhizosphere	MIRIFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHTRRESAVPV
Ga0209027_11722062	3300026300	Grasslands Soil	MRTFYVRPECDTGYGRGDGSSYDNAWNGFKAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARPDPRRESRNLSRSVSG
Ga0209240_10086322	3300026304	Grasslands Soil	MRTFYVRPESDTGYGRGDGTSYENAWNGFKAVSWEALSGAPATLWVCGGPEGPAGFVTLHVEWSYLKANDGETRPHPRRESPIAV
Ga0209153_11705842	3300026312	Soil	MRKFYVRPQCDTGYGKGDGTSYANAWNGFKAVDWNVLRAAPATLWVCGESLADAPTGFVTLHIEWSYLKANEREARPDPRRESPLAV
Ga0209761_13211141	3300026313	Grasslands Soil	MRTFYVRPESDRGYGKGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV
Ga0209690_11240432	3300026524	Soil	MRTFYVRPESDRGYGKGDGTSYEHAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGNDVQARPHPRRESPIAV
Ga0209056_104307641	3300026538	Soil	MRTFYVRPERDTGYGRGDGTSYENAWNGFKAVNWDALAGEPATLWVCGGPEGPAGFVTLHVEWSYLKGDDVQARPNTRRESPIAV
Ga0209474_101034682	3300026550	Soil	MRIFYVRPDCTPGYGKGDGTSYENAWNGFKSVNWAALAGAPATLWVCGDPGGPGGFVTLHVEWSYLKSRPLVAVVREAQARPNTRRESPVAL
Ga0209474_101749162	3300026550	Soil	MRKFYVRPECDAGYGKGDGTSYANAWNGFRAVDWNVLRSEPATLWVCGESMANGPTGFVTLHIEWSYLKANEREARPDPRRESPLAV
Ga0209166_101033062	3300027857	Surface Soil	MRKFYVRPECDTGYGKGDGTSYDNAWNGFKSVNWDALRGAPATLWVCGGPDSMTAGPAGFVTLHIEWSYLKSNEREARTDPRRESALPV
Ga0209488_100426432	3300027903	Vadose Zone Soil	MRTFYVRPESDTGYGRGDGTSYENAWNGFKAVSWEALSGAPATLWVCGGPEGPAGFVTLHVEWSYLKANDGETHPHPRRESPIAV
Ga0209488_110915052	3300027903	Vadose Zone Soil	MRTFYVRPASDKGYGKGDGTSYENAWNGFKAVSWDALAGEPATLWVCGGPQGPAGFVTLHVEWSYLKGDDVQARPDTRRESAIAV
Ga0310886_103697991	3300031562	Soil	TFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHTRRESPVPV
Ga0307469_110626182	3300031720	Hardwood Forest Soil	MRKFYVRPECDAGYGKGDGTSYANAWNGFKSVDWSALRGEPSTLWVCGESEANAPTGFVTLHIEWSYLKANEREARPDPRRESPLAV
Ga0307469_125046031	3300031720	Hardwood Forest Soil	GYGRGDGTSYDNAWNGFKSVQWDALAGAPATLWVCGGAEGPAGFVTLHVEWSYLKSNELEARTDPRRESPVAV
Ga0307468_1001780733	3300031740	Hardwood Forest Soil	VRTFYVRPECDSGYGTGDGSSYDNAWNGFKAVKWEALAGSPATVWVCGGAEGPGGFITLHVEWSYLKTNDGEARPHPRR
Ga0307468_1004734172	3300031740	Hardwood Forest Soil	MRKFYVRPECDTGYGKGDGTSYANAWNGFKSVDWSALRGEPSTLWVCGESTTNAPTGFVTLHIEWSYLKENEREARTDPRRESPLAV
Ga0307473_105309802	3300031820	Hardwood Forest Soil	MRKFYVRPECDAGYGKGDGTSYDNAWNGFKAVNWDALAGAPATLWVCGGPEGPAGFVTLHIEWSYLKSNEREARTDPRRESALPV
Ga0310904_103691322	3300031854	Soil	MIRTFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNHSNAIEPHEIAARPHTRRESPVPV
Ga0310900_106534842	3300031908	Soil	MIRIFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHTRRESPVPV
Ga0307412_106477682	3300031911	Rhizosphere	MRTFYVRPERDEGYGAGDGTTYENAWNGFRAVDWSALAGTPATLWVCGEPGGPGGFVTLHVEWSYLNKNDVEVEARPNTRREPALAV
Ga0310884_103769532	3300031944	Soil	MIRIFYVRPDCASGYGMGDGSSYENAWNGFRSVDWSALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNNSNAIEPHEIAARPHSRRESPVPV
Ga0307416_1017495122	3300032002	Rhizosphere	MIRTFYVRPERPQGYGKGDGTTYEHAWNGFKSVDWTALAGQPATLWVCGEPGGPGGFVTLHVEWSYLNKNDVEVEAR
Ga0307470_114968242	3300032174	Hardwood Forest Soil	MRKFYVRPECDTGYGRGDGTSYDNAWNGFKSVQWEALAGAPATLWVCGGAEGPAGFVTLHVEWSYLKSNELEARTDPRRESPVAV
Ga0307471_1038445981	3300032180	Hardwood Forest Soil	RKFYVRPECDAGYGKGDGTSYANAWNGFKSVDWSALHGEPATLWVCGESEANAPTGFVTLHIEWSYLKANEREARPDPRRESPLAV
Ga0307472_1008092472	3300032205	Hardwood Forest Soil	MRSFYVRPESDQGYGAGDGTSYENAWNGLESVDWDALRTEPATLWVCGAPDGPQGFVTVHVEWSYLKASGDNALPARPDPRREPAVAV
Ga0307472_1018786011	3300032205	Hardwood Forest Soil	AWTTTSASPRSGNAMRKFYVRPECDTGYGRGDGTSYDNAWNGFKSVQWDALAGAPATLWVCGGAEGPAGFVTLHVEWSYLKSNELEARTDPRRESPVAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048514

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences