Metagenome / Metatranscriptome Family F048419

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F048419
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	55 residues
Representative Sequence	VEAGERMLIRCEGGPSRSRLVRYPPPVEVVETEGLYVLVDDGPPEQWWYQFVPREL
Number of Associated Samples	113
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.18 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	83.11 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (79.730 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.216 % of family members)
Environment Ontology (ENVO)	Unclassified (33.784 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.919 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.57% β-sheet: 33.33% Coil/Unstructured: 63.10%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.15.1.1: Ubiquitin-like	d1wx8a1	1wx8	0.58
d.15.1.1: Ubiquitin-like	d1wx8a1	1wx8	0.58
d.391.1.1: POlypeptide TRansport Associated (PORTRA) domain-like	d2mhja1	2mhj	0.56
d.15.9.0: Glutamine synthetase, N-terminal domain	d5zlia1	5zli	0.56
d.391.1.1: POlypeptide TRansport Associated (PORTRA) domain-like	d2mhja1	2mhj	0.56
d.15.9.0: Glutamine synthetase, N-terminal domain	d5zlia1	5zli	0.56
d.15.1.1: Ubiquitin-like	d1yqba1	1yqb	0.55
b.53.1.0: Ribosomal protein L25-like	d5bnza2	5bnz	0.55
d.15.1.1: Ubiquitin-like	d1yqba1	1yqb	0.55
b.53.1.0: Ribosomal protein L25-like	d5bnza2	5bnz	0.55

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00583	Acetyltransf_1	10.14
PF01593	Amino_oxidase	4.05
PF01039	Carboxyl_trans	4.05
PF00107	ADH_zinc_N	3.38
PF13493	DUF4118	2.70
PF00903	Glyoxalase	2.70
PF02195	ParBc	2.03
PF14588	YjgF_endoribonc	2.03
PF12867	DinB_2	2.03
PF08240	ADH_N	2.03
PF02720	DUF222	2.03
PF00072	Response_reg	2.03
PF13671	AAA_33	1.35
PF12681	Glyoxalase_2	1.35
PF13508	Acetyltransf_7	1.35
PF09995	MPAB_Lcp_cat	1.35
PF01018	GTP1_OBG	1.35
PF02583	Trns_repr_metal	1.35
PF00378	ECH_1	1.35
PF12147	Methyltransf_20	1.35
PF02646	RmuC	1.35
PF02410	RsfS	1.35
PF05721	PhyH	1.35
PF00005	ABC_tran	0.68
PF00067	p450	0.68
PF02803	Thiolase_C	0.68
PF03861	ANTAR	0.68
PF09966	DUF2200	0.68
PF16859	TetR_C_11	0.68
PF11272	DUF3072	0.68
PF11716	MDMPI_N	0.68
PF00781	DAGK_cat	0.68
PF00441	Acyl-CoA_dh_1	0.68
PF02577	BFN_dom	0.68
PF10604	Polyketide_cyc2	0.68
PF00782	DSPc	0.68
PF13419	HAD_2	0.68
PF01230	HIT	0.68
PF14137	DUF4304	0.68
PF00589	Phage_integrase	0.68
PF01048	PNP_UDP_1	0.68
PF00012	HSP70	0.68
PF05762	VWA_CoxE	0.68
PF02371	Transposase_20	0.68
PF13701	DDE_Tnp_1_4	0.68
PF07992	Pyr_redox_2	0.68
PF00766	ETF_alpha	0.68
PF04167	DUF402	0.68
PF04075	F420H2_quin_red	0.68
PF00122	E1-E2_ATPase	0.68
PF08264	Anticodon_1	0.68
PF00196	GerE	0.68
PF10861	DUF2784	0.68
PF16697	Yop-YscD_cpl	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	4.05
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	4.05
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	4.05
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.35
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.35
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	1.35
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	1.35
COG0799	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits	Translation, ribosomal structure and biogenesis [J]	1.35
COG0536	GTPase involved in cell partioning and DNA repair	Replication, recombination and repair [L]	1.35
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.68
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.68
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.68
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.68
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.68
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.68
COG2124	Cytochrome P450	Defense mechanisms [V]	0.68
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	0.68
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.68
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.68
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.68
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.68
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.68
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.41 %
Unclassified	root	N/A	19.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.41 %
Unclassified	root	N/A	19.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.73 %
Unclassified	root	N/A	19.59 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.68 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.16 %
Unclassified	root	N/A	19.59 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.68 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58.11 %
Unclassified	root	N/A	19.59 %
uncultured bacterium A1Q1_fos_15	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_15	0.68 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.30 %
Unclassified	root	N/A	19.59 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	13.51 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.68 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.68 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.68 %
uncultured bacterium A1Q1_fos_15	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_15	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.59 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	13.51 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	6.08 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.03 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.03 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.35 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.68 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.68 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.68 %
uncultured bacterium A1Q1_fos_15	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_15	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.59 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	13.51 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.03 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	1.35 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.35 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	1.35 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.68 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.68 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.68 %
uncultured bacterium A1Q1_fos_15	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_15	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.03 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1.35 %
Actinomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces	1.35 %
Iamia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia	0.68 %
Rhabdothermincola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola	0.68 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.68 %
Agrococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agrococcus	0.68 %
Subtercola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.68 %
uncultured bacterium A1Q1_fos_15	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_15	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.03 %
unclassified Actinomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces	1.35 %
Rhabdothermincola salaria	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria	0.68 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.68 %
unclassified Iamia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia	0.68 %
unclassified Agrococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agrococcus → unclassified Agrococcus	0.68 %
Subtercola vilae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola vilae	0.68 %
Symbiodinium pilosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	0.68 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.68 %
uncultured bacterium A1Q1_fos_15	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_15	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.03 %
Actinomyces sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp.	1.35 %
Iamia sp. SCSIO 61187	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	0.68 %
Agrococcus sp. SGAir0287	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agrococcus → unclassified Agrococcus → Agrococcus sp. SGAir0287	0.68 %
Rhabdothermincola salaria	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria	0.68 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.68 %
Subtercola vilae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola vilae	0.68 %
Symbiodinium pilosum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	0.68 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.68 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.68 %
uncultured bacterium A1Q1_fos_15	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_15	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103662496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1381	Open in IMG/M
3300002184\|JGI24770J26754_10102151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1068	Open in IMG/M
3300003997\|Ga0055466_10234854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300004114\|Ga0062593_102340893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	601	Open in IMG/M
3300004156\|Ga0062589_100643698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	929	Open in IMG/M
3300004156\|Ga0062589_101645868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300004643\|Ga0062591_100220660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1415	Open in IMG/M
3300005093\|Ga0062594_100047617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2161	Open in IMG/M
3300005093\|Ga0062594_100386980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300005093\|Ga0062594_101546784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	683	Open in IMG/M
3300005178\|Ga0066688_10352722	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300005332\|Ga0066388_104063988	Not Available	746	Open in IMG/M
3300005338\|Ga0068868_101530909	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005366\|Ga0070659_100683462	Not Available	887	Open in IMG/M
3300005444\|Ga0070694_101176714	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300005456\|Ga0070678_100320022	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300005554\|Ga0066661_10311348	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium pilosum	969	Open in IMG/M
3300005557\|Ga0066704_10124908	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300005559\|Ga0066700_11047677	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005591\|Ga0070761_11070675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	513	Open in IMG/M
3300005764\|Ga0066903_104283991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	763	Open in IMG/M
3300005842\|Ga0068858_101013187	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005937\|Ga0081455_10018452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6646	Open in IMG/M
3300005937\|Ga0081455_10324019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1096	Open in IMG/M
3300005981\|Ga0081538_10152076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1046	Open in IMG/M
3300006038\|Ga0075365_10093350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2053	Open in IMG/M
3300006038\|Ga0075365_10202429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1391	Open in IMG/M
3300006038\|Ga0075365_10284849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1163	Open in IMG/M
3300006038\|Ga0075365_10717413	Not Available	706	Open in IMG/M
3300006046\|Ga0066652_100985395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	801	Open in IMG/M
3300006049\|Ga0075417_10001244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6875	Open in IMG/M
3300006049\|Ga0075417_10251284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	848	Open in IMG/M
3300006049\|Ga0075417_10569780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300006051\|Ga0075364_10947353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300006051\|Ga0075364_10973350	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300006057\|Ga0075026_100592485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	650	Open in IMG/M
3300006178\|Ga0075367_10451900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	814	Open in IMG/M
3300006194\|Ga0075427_10018263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1099	Open in IMG/M
3300006354\|Ga0075021_10490513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	778	Open in IMG/M
3300006354\|Ga0075021_10529345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	748	Open in IMG/M
3300006574\|Ga0074056_11592497	Not Available	588	Open in IMG/M
3300006844\|Ga0075428_101517676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	702	Open in IMG/M
3300006845\|Ga0075421_100348400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1789	Open in IMG/M
3300006845\|Ga0075421_100814972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1073	Open in IMG/M
3300006847\|Ga0075431_100483043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1231	Open in IMG/M
3300006847\|Ga0075431_100648178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1037	Open in IMG/M
3300006853\|Ga0075420_100012013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7693	Open in IMG/M
3300006881\|Ga0068865_100866856	Not Available	783	Open in IMG/M
3300007521\|Ga0105044_10080356	All Organisms → cellular organisms → Bacteria	3774	Open in IMG/M
3300007799\|Ga0105049_10059126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3868	Open in IMG/M
3300009012\|Ga0066710_102072728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300009053\|Ga0105095_10035523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2684	Open in IMG/M
3300009094\|Ga0111539_10023916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7506	Open in IMG/M
3300009094\|Ga0111539_10495589	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1423	Open in IMG/M
3300009095\|Ga0079224_102234822	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300009095\|Ga0079224_103074560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	665	Open in IMG/M
3300009098\|Ga0105245_10603728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300009100\|Ga0075418_11391402	All Organisms → cellular organisms → Bacteria → Terrabacteria group	761	Open in IMG/M
3300009100\|Ga0075418_12846799	Not Available	528	Open in IMG/M
3300009156\|Ga0111538_10149532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2967	Open in IMG/M
3300009156\|Ga0111538_10327840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1938	Open in IMG/M
3300009162\|Ga0075423_11579677	Not Available	705	Open in IMG/M
3300009789\|Ga0126307_11199965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300010047\|Ga0126382_11476938	Not Available	624	Open in IMG/M
3300012008\|Ga0120174_1060720	Not Available	1014	Open in IMG/M
3300012014\|Ga0120159_1001178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14814	Open in IMG/M
3300012212\|Ga0150985_114103606	Not Available	640	Open in IMG/M
3300012948\|Ga0126375_11170679	Not Available	638	Open in IMG/M
3300012958\|Ga0164299_11149653	Not Available	584	Open in IMG/M
3300012960\|Ga0164301_10888314	Not Available	690	Open in IMG/M
3300012985\|Ga0164308_12052511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	533	Open in IMG/M
3300013306\|Ga0163162_10810491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1053	Open in IMG/M
3300013308\|Ga0157375_10430612	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300015371\|Ga0132258_10365310	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3574	Open in IMG/M
3300015371\|Ga0132258_10709305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2533	Open in IMG/M
3300015371\|Ga0132258_11259896	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300015371\|Ga0132258_13211897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp.	1127	Open in IMG/M
3300015372\|Ga0132256_101572919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria	768	Open in IMG/M
3300015372\|Ga0132256_102544840	All Organisms → cellular organisms → Bacteria → Terrabacteria group	613	Open in IMG/M
3300015373\|Ga0132257_101464901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	870	Open in IMG/M
3300015374\|Ga0132255_101705362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300015374\|Ga0132255_104437331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp.	595	Open in IMG/M
3300018072\|Ga0184635_10186995	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300018433\|Ga0066667_10067376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2246	Open in IMG/M
3300018466\|Ga0190268_11673155	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300018466\|Ga0190268_11757392	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_15	556	Open in IMG/M
3300018469\|Ga0190270_10159038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1849	Open in IMG/M
3300018469\|Ga0190270_10330019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1376	Open in IMG/M
3300018476\|Ga0190274_13112011	Not Available	558	Open in IMG/M
3300018481\|Ga0190271_11106030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300018481\|Ga0190271_12260623	Not Available	649	Open in IMG/M
3300019356\|Ga0173481_10713494	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300022413\|Ga0224508_10461652	Not Available	796	Open in IMG/M
3300025927\|Ga0207687_10439367	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300025935\|Ga0207709_10948305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agrococcus → unclassified Agrococcus → Agrococcus sp. SGAir0287	701	Open in IMG/M
3300026035\|Ga0207703_10489319	Not Available	1153	Open in IMG/M
3300026118\|Ga0207675_101567501	Not Available	679	Open in IMG/M
3300026331\|Ga0209267_1326506	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300027636\|Ga0214469_1027816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1855	Open in IMG/M
3300027823\|Ga0209490_10508313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	660	Open in IMG/M
3300027850\|Ga0209591_10017561	Not Available	7414	Open in IMG/M
3300027870\|Ga0209023_10012866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7748	Open in IMG/M
3300027870\|Ga0209023_10341406	Not Available	939	Open in IMG/M
3300027873\|Ga0209814_10000485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13071	Open in IMG/M
3300027873\|Ga0209814_10349080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300027894\|Ga0209068_10494265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	705	Open in IMG/M
3300027907\|Ga0207428_10325870	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1134	Open in IMG/M
3300027907\|Ga0207428_10443726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	947	Open in IMG/M
3300027909\|Ga0209382_10121094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3051	Open in IMG/M
3300027909\|Ga0209382_10845621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	969	Open in IMG/M
3300027909\|Ga0209382_10957333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300027998\|Ga0247709_101524	Not Available	925	Open in IMG/M
3300028573\|Ga0265334_10116499	Not Available	957	Open in IMG/M
3300028819\|Ga0307296_10392956	Not Available	758	Open in IMG/M
3300029980\|Ga0302298_10183455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	681	Open in IMG/M
3300029987\|Ga0311334_10499903	Not Available	977	Open in IMG/M
3300029990\|Ga0311336_10158709	Not Available	1826	Open in IMG/M
3300030000\|Ga0311337_10430611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	1120	Open in IMG/M
3300030002\|Ga0311350_10033277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4489	Open in IMG/M
3300030010\|Ga0302299_10081875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1789	Open in IMG/M
3300030019\|Ga0311348_10405827	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300030294\|Ga0311349_10142588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2245	Open in IMG/M
3300030336\|Ga0247826_10153550	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300030339\|Ga0311360_10182129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	1723	Open in IMG/M
3300030619\|Ga0268386_10274404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300030619\|Ga0268386_10761771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	623	Open in IMG/M
3300030838\|Ga0311335_10112311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	1767	Open in IMG/M
3300030838\|Ga0311335_10659302	Not Available	735	Open in IMG/M
3300031199\|Ga0307495_10258522	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031228\|Ga0299914_10523265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300031229\|Ga0299913_10447220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300031521\|Ga0311364_10277335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1710	Open in IMG/M
3300031521\|Ga0311364_11286190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	725	Open in IMG/M
3300031548\|Ga0307408_101290608	Not Available	684	Open in IMG/M
3300031670\|Ga0307374_10011593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12507	Open in IMG/M
3300031726\|Ga0302321_100026802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5412	Open in IMG/M
3300031852\|Ga0307410_10186139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1576	Open in IMG/M
3300031918\|Ga0311367_11265315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	730	Open in IMG/M
3300031918\|Ga0311367_11900747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	576	Open in IMG/M
3300032002\|Ga0307416_101179019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola vilae	871	Open in IMG/M
3300032126\|Ga0307415_100200231	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300032126\|Ga0307415_101501309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300032160\|Ga0311301_10302318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2561	Open in IMG/M
3300032896\|Ga0335075_11383339	Not Available	595	Open in IMG/M
3300032897\|Ga0335071_10075335	All Organisms → cellular organisms → Bacteria	3308	Open in IMG/M
3300033433\|Ga0326726_11446971	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300034281\|Ga0370481_0050209	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.11%
Host-Associated	Host-Associated	41.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.97%
Plants	Host-Associated → Plants	41.89%
Aquatic	Environmental → Aquatic	10.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.00%
Peat	Environmental → Terrestrial → Peat	11.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.49%
Freshwater	Environmental → Aquatic → Freshwater	5.41%
Roots	Host-Associated → Plants → Roots	5.41%
Sediment	Environmental → Aquatic → Sediment	3.38%
Marine	Environmental → Aquatic → Marine	1.35%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.30%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.49%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.41%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	4.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.38%
Ice	Environmental → Aquatic → Freshwater → Ice	2.70%
Loam	Environmental → Terrestrial → Soil → Loam	2.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.70%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.68%
Sediment	Environmental → Aquatic → Marine → Sediment	0.68%
Clay	Environmental → Terrestrial → Soil → Clay	0.68%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.73%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	4.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.38%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.03%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.03%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.03%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.35%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.68%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.81%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	10.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.73%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	4.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.38%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	2.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.70%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	2.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	1.35%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.35%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.35%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.68%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002184	Freshwater and sediment microbial communities from Lake Erie, Canada	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300007799	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022413	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_21	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027823	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes)	Environmental	Open in IMG/M
3300027850	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027998	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-2-E_D	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300029980	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_3	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1036624963	3300000956	Soil	MEAGERMLIPCDGGRSQSRLVRFPPPLEIDEREGTYVLVDDGPPERWRYEFVTRAGG*
JGI24770J26754_101021512	3300002184	Freshwater And Sediment	MFDLGDRMLIPCDGGPSISRLERFPPAFEIPTDDGTYVLVDDGPPEQWRYEYVPRRL*
Ga0055466_102348541	3300003997	Natural And Restored Wetlands	LGVGVLEEGERFFIPCDGGPSASRLVRFPPPLEVEEEDGMYVLVDEGPPEEWRYLFVPREP*
Ga0062593_1023408932	3300004114	Soil	MPEPGERMLLGCEGGPSQSRLVHWPPPLEIVERGGMYVLEDDGPPDSWRYVFVPDSAT*
Ga0062589_1006436982	3300004156	Soil	VPELGERLLIRCEGGPSSSRLVHHPPPLEIVERGGVYVLVDDGPAESWRYLFVAS*
Ga0062589_1016458682	3300004156	Soil	VDDGERMLLPCDGGPSQSRLVRYPPPLEIEERNGTYVLVDDGPPEHWHYLFVPEVR*
Ga0062591_1002206603	3300004643	Soil	VDDGERMLLPCDGGPSQSRLVRYPPPLEIEERNGMYVLVDDGPPEHWHYLFVPEVR*
Ga0062594_1000476176	3300005093	Soil	MPEPGERLLLGCEGGPSQSRLVHWPPPLEIVERGGMYVLEDDGPPESWRYVFVPDSAR*
Ga0062594_1003869801	3300005093	Soil	MLIACEGGPSMGRLVHHPPPLEIVERGGIYVLVDDGPIETWRYVFVPT*
Ga0062594_1015467841	3300005093	Soil	MEAGERMLLPCDGGPSQSRLVRFPPPLEIEEPDGIYVLVDEGPPERWRYTFVPDPG*
Ga0066688_103527222	3300005178	Soil	MQPGERMFIPCQGGPSTSRLERYPPPLEVVERDGMYVLEDEGPPEQWRYLFVPREASG*
Ga0066388_1040639881	3300005332	Tropical Forest Soil	VERGQRMLIRCEGGPSQSRLARFPPPVEVEEDEGLYVLVDDGPPEGWWYQFVPRKP*
Ga0068868_1015309092	3300005338	Miscanthus Rhizosphere	VSPPDEPPVPEPGERMLLPCDGGPSISRLVTYPPPLEIPERDGTYVLVDDGPPAQWSYTFLPHGP*
Ga0070659_1006834622	3300005366	Corn Rhizosphere	MGCDTEAVQDGERMLIPCVGGSGYSRLVRYPPPLEIPERGGMYVLVDDGPPHEWRYEFLADEE*
Ga0070694_1011767142	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MEAGERMLLPCDGGPSQSRLVRFPPPLEIEEPDGIYVLVDEGPPERWRYAFVPDPG*
Ga0070678_1003200221	3300005456	Miscanthus Rhizosphere	LLPCDGGPSISRLVTYPPPLEIPERDGTYVLVDDGPPAQWSYTFLPHGP*
Ga0066661_103113482	3300005554	Soil	MQPGERMFIPCQGGPSMSRLERYPPPLEVVERDGMYVLEDEGPPEQWRYLFVPREASG*
Ga0066704_101249082	3300005557	Soil	MQPGERMFIPCQGGPSTSRLERYPPPREVVERDGMYVLEDEGPPEQWRYLFVPREASG*
Ga0066700_110476772	3300005559	Soil	MQPGERMFIPCQGGPSMSRLERYPPPLEVVESDGMYVLEDEGPPEQWRYLFVPREASG*
Ga0070761_110706751	3300005591	Soil	VQEADGIFVLQPGDRMFIPCRGGPCVSRVERFPPPLEIEELGGLYVLEDDGPAEEWRYLFVPREF*
Ga0066903_1042839912	3300005764	Tropical Forest Soil	MEQGERMLIPCRGGPSSSRLVRYPPPLEIDERGGMYVLVDDGPAEQWTYEFVATIE*
Ga0068858_1010131872	3300005842	Switchgrass Rhizosphere	VPEPGERMLLPCDGGPSISRLVTYPPPLEIPERDGTYVLVDDGPPAQWSYTFLPHGP*
Ga0081455_100184529	3300005937	Tabebuia Heterophylla Rhizosphere	MLIRCEGGPSMSRLVRYPPPLEIVEETGLYVLVDDGPPQTWWYEFVPRVL*
Ga0081455_103240192	3300005937	Tabebuia Heterophylla Rhizosphere	VEPGQRMLIRCEGGPSQSRLVRFPPPVEVEEDQGLYVLVDDGPPDHWWYQFVPRES*
Ga0081538_101520763	3300005981	Tabebuia Heterophylla Rhizosphere	MLIRCEGGPSMSRLVRYPPPLEIEEETGLYVLVDDGPPQTWWYEFVPRLL*
Ga0075365_100933503	3300006038	Populus Endosphere	MEDGDRMLLRCEGGPGRSRLVRYPPPVERPEPGGIYVLVDDGPPEQWWYEWVPDET*
Ga0075365_102024293	3300006038	Populus Endosphere	VEHGERMLLPCDGGPSTSRLVRYPPPLEIVERDGIYVLVDEGPPAAWRYEFVPDAG*
Ga0075365_102848492	3300006038	Populus Endosphere	MGAVEEGERMLIPCDRGPSISRLVRYPPPLEIPEGDGIYVLVDDGPPEHWRYDFVTDGG*
Ga0075365_107174133	3300006038	Populus Endosphere	MSGEPIVEPGERMLIPCVGGPSISRLVRFPPPLEIEEPDGTYVLVDDGPPQHWRYDFVPFA*
Ga0066652_1009853952	3300006046	Soil	VEDGERMLVPCDGGPSRSRLVRYPPPLEIQEINGMYVLVDEGPPEHWSYVFVHEVG*
Ga0075417_100012444	3300006049	Populus Rhizosphere	VEAGERMLIRCEGGPSRSRLVRYPPPVEVVETEGLYVLVDDGPPEQWWYQFVPREL*
Ga0075417_102512843	3300006049	Populus Rhizosphere	CEGGPSQSRLARFPPPVEVAEDEGLYVLVDDGPPEGWWYRFVPREP*
Ga0075417_105697801	3300006049	Populus Rhizosphere	MLIRCEGGPSMSRLVRYPPPVEVEEETGMYVLVDDGPPESWWYAFVPHEL*
Ga0075364_109473531	3300006051	Populus Endosphere	MLLPCDGGPSQSRLVRYPPPLEIEERNGMYVLVDDGPPEHWHYLFVPEVR*
Ga0075364_109733502	3300006051	Populus Endosphere	MLIPCEGEGPSQSRLVRYPPPLEIEEDTGVYVLVDDGPLETWRYEFVPRSTTR*
Ga0075026_1005924852	3300006057	Watersheds	MLIPCKGGPSVSRLVRYPPPLEIDEKEGTYVLVDEGAPENWQYDFISRRT*
Ga0075367_104519002	3300006178	Populus Endosphere	MEDAEGPPPPEHGERMLIGCDGGPSQGRLVRFPPPLEIAERGGMYVLVDDGPPHEWRYLFVPDEP*
Ga0075427_100182632	3300006194	Populus Rhizosphere	VDAGERMLIRCEGGPSRSRLVRYPPPVEVVETEGLYVLVDDGPPEQWWYQFVPREL*
Ga0075021_104905132	3300006354	Watersheds	CEGGPSTSRLVRYPPPLEIKERGGEYVLVDDGPPEHWRYDFIPVEP*
Ga0075021_105293452	3300006354	Watersheds	MLIPCDGGPSISRLQRYPPPFEIHETDGMYVLVDDGPPQNWRYEFVPHSS*
Ga0074056_115924972	3300006574	Soil	MEPGERMLIPCTGHGPSVSRLVTFPPPLEIELDRDGGVYVLEDDGEPEVWTYRFVPRP*
Ga0075428_1015176762	3300006844	Populus Rhizosphere	VEPGQRMLIHCEGGPSQSRLARFPPPVEVKEDEGLYVLVDDGPPEGWWYQFVPREP*
Ga0075421_1003484004	3300006845	Populus Rhizosphere	VEPGQRMLIRCEGGPSQSRLARFPPPVEVAEDEGLYVLVDDGPPEGWWYQFVPREP*
Ga0075421_1008149722	3300006845	Populus Rhizosphere	MLIRCEGGPSQSRLVRYPPPVEVEETQGLYVLVDDGPPEQWWYQFVPREV*
Ga0075431_1004830433	3300006847	Populus Rhizosphere	MLIRCEGGPSQSRLVRYPPPVEVEETQGLYVLVDDGPPEQWWYQFVPRE
Ga0075431_1006481781	3300006847	Populus Rhizosphere	VEPGQRMLIRCEGGPSQSRLARSPPPVEVAEDEGLYVLVDDGPPEGWWYRFVPREP*
Ga0075420_1000120133	3300006853	Populus Rhizosphere	VEPGQRMLIRCEGGPSQSRLARFPPPVEVAEDEGLYVLVDDGPPEGWWYRFVPREP*
Ga0068865_1008668561	3300006881	Miscanthus Rhizosphere	ERMLLPCDGGPSISRLVTYPPPLEIPERDGTYVLVDDGPPAQWSYTFLPHGP*
Ga0105044_100803567	3300007521	Freshwater	MEPGERMLLPCDGGPSQSRLVRYPPPLEIDARDGQYVLLDDGPAERWRYVFVAATA*
Ga0105049_100591268	3300007799	Freshwater	MEPGERMLLPCDGGPSQSRLVRYPPPLEIDVRDGQYVLLDDGPAERWRYVFVAATA*
Ga0066710_1020727281	3300009012	Grasslands Soil	VEDGERMLIPCDGGPCRSRLVRYPPPLEIAERGGTYVLVDDGPAELWRYDFLVKDG
Ga0105095_100355231	3300009053	Freshwater Sediment	LIPCNGGPSISRLVRYPPPLEIEERGGVYVLVDDGPPELWRYEFIQPER*
Ga0111539_100239164	3300009094	Populus Rhizosphere	VEAGERMLIRCEGGPSRSRLVRYPPPVEVVETEGLYVLIDDGPPEQWWYQFVPREL*
Ga0111539_104955893	3300009094	Populus Rhizosphere	MLIRCEGGPSQSRLARFPPPVEVAEDEGLYVLVDDGPPEGWWYQFVPREP*
Ga0079224_1022348222	3300009095	Agricultural Soil	MEEGDRMLIPCRGGPSTSRLVRYPPPPEIDERGGTYVLVDDGPPERWRYDFVPDDR*
Ga0079224_1030745602	3300009095	Agricultural Soil	MPLSDGDRMLIPCDGGPVMSRLVRYPPPLEISDDTGEYVLVDEGPPEEWRYRQVTEG*
Ga0105245_106037281	3300009098	Miscanthus Rhizosphere	VPEPGDRLLIACEGGPSSSRLVQHPPPLEIVERGGVYVLVDDGPAASWRYVFVPS*
Ga0075418_113914022	3300009100	Populus Rhizosphere	MLIRCEGGPSMSRLVRYPPPVEVEEETGMYVLVDDGPPETWWYAFVPREL*
Ga0075418_128467992	3300009100	Populus Rhizosphere	MLIRCEGGPSQSRLARFPPPVEVAEDEGLYVLVDDGPPEGWWYRFVPREP*
Ga0111538_101495323	3300009156	Populus Rhizosphere	MLIRCEGGPSQSRLARSPPPVEVAEDEGLYVLVDDGPPEGWWYQFVPREP*
Ga0111538_103278403	3300009156	Populus Rhizosphere	VPQDGERLFIRCEGGPSASRLERWPPALEVEEVDGVYVLIDEGPPEEWRYLFVPRQH*
Ga0075423_115796772	3300009162	Populus Rhizosphere	MLIHCEGGPSQSRLARFPPPVEVKEDEGLYVLVDDGPPEGWWYQF
Ga0126307_111999652	3300009789	Serpentine Soil	MTTGYCTMAPMEPGERMLIPCRGGPSTSRLVRYPPPVEVAERGGMYVLVDDGPPEHWSYDFVPAD*
Ga0126382_114769382	3300010047	Tropical Forest Soil	MVEQGERMLIRCDGGPSQSRLVRYPPPLEVEETEGLYVLVDDGPPDQWWYQFVPREL*
Ga0120174_10607202	3300012008	Permafrost	MMPGERMLIRCEGGPSTSRLERFPPPVEIEERDGTYVLDDDGPTEQWRYLFVARTM*
Ga0120159_100117813	3300012014	Permafrost	LFSMMPGERMLIRCEGGPSTSRLERFPPPVEIEERDGTYVLDDDGPTEQWRYLFVARTM*
Ga0150985_1141036061	3300012212	Avena Fatua Rhizosphere	VPEAGERLFVRCEGGPSASRLERWPPPLEVPEADGMYVLVDEGPVEQWRYVFVPREL*
Ga0126375_111706792	3300012948	Tropical Forest Soil	MEAGERMLVPCDGGPSQSRLVRYPPPLEIAENGGMYVLVDQGPPEHWRYEFVPEQ*
Ga0164299_111496532	3300012958	Soil	VEAGERMLIRCDSGPSRSRLERFPPPLEVPERDGTYVLVDDGPPEHWWDQFVPSVP*
Ga0164301_108883141	3300012960	Soil	TAMERFEGPPPPEPGDRLLLPCDGGPSQSRLVHWPPPLEIPERDGTYVLVDDGPPAQWSYTFLPHGP*
Ga0164308_120525111	3300012985	Soil	MLQAGDRMLIRCEGGPSTSRLERFPPPLEVSERDGMYVLVDDGSPDEWWYQFVPHRP*
Ga0163162_108104911	3300013306	Switchgrass Rhizosphere	MLLPCDGGPSISRLVTWPPPLEIVEHDGMYVLVDDGPPATWSYTFVPSEPS*
Ga0157375_104306122	3300013308	Miscanthus Rhizosphere	VSTPAEPPVPEPGERMLLPCDGGPSISRLVTYPPPLEIPERDGTYVLVDDGPPAQWSYTFLPHGP*
Ga0132258_103653104	3300015371	Arabidopsis Rhizosphere	MEPGERMLIPCVGGRDYSRLVRYPPPVEIEEDTGIYVLVDDGPPELWRYEFVPNGA*
Ga0132258_107093052	3300015371	Arabidopsis Rhizosphere	MQPGERMLIRCEGGPSTSRLERFPPPLEIEERGGTYVLDDDGPPEQWQYVFVANEL*
Ga0132258_112598962	3300015371	Arabidopsis Rhizosphere	MLIPCAGGPAISRLVRYPPPLEVEVEGGTYVLVDSGSPENWTYEFVAGTR*
Ga0132258_132118972	3300015371	Arabidopsis Rhizosphere	MRTSVTRGYDSEMVEPGERMLIPCDGGPCMSRLVRYPPPFEVQERGGMYVLVDDGPPNEWRYEFVADDQ*
Ga0132256_1015729192	3300015372	Arabidopsis Rhizosphere	MRASVTRGYDSEMVEPGERMLIPCDGGPCMSRLVRYPPPFEVQERGGMYVLVDDGPTNEWRYEFVADDQ*
Ga0132256_1025448402	3300015372	Arabidopsis Rhizosphere	MLIWCEGGPSIGRAVYFPPPLEIAVEGGLYVLVDGG
Ga0132257_1014649011	3300015373	Arabidopsis Rhizosphere	MVEQGERMLIPCDGGPCRSRLVRYPPPFEVQERGGMYVLVDDGPPNEWRYEFVADDQ*
Ga0132255_1017053623	3300015374	Arabidopsis Rhizosphere	MEPGERMLIPCVGGRDYSRLVRYPPPVEIEEDTGIYVLVDDGPPELWRYEFVP
Ga0132255_1044373312	3300015374	Arabidopsis Rhizosphere	PCDGGPCRSRLGRYPPPFEVQERGGMYVLVDDGPPNEWRYEFVADDQ*
Ga0184635_101869952	3300018072	Groundwater Sediment	VEHGQRMLIRCEGGPSQSRLVRYPPPVEVEESEGLYVLVDDGSPEQWWYQLVPRQI
Ga0066667_100673763	3300018433	Grasslands Soil	MQPGERMLIRCEGGPSTSRLERYPPPLEIEERGGMYVLEDDGPPEQWHYLFVPTRPLRGS
Ga0190268_116731552	3300018466	Soil	IWCDGGPSISRLVVYPPPLEIVDREGVYVLVDDGPPEQWRYDFIRSGG
Ga0190268_117573922	3300018466	Soil	LRPGDRLFISCEGGPSWNRLEVWPPRLEVEEPDGVYVLQDEGPRAEWRYLFVPREA
Ga0190270_101590383	3300018469	Soil	MEDGERMLIPCQGGPSRSRLVRCPPPLEIEEDTGLYVLVDDGAPDAWRYEFVPRAATR
Ga0190270_103300193	3300018469	Soil	VEQGQRMLIRCEGGPSQSRLVRYPPPVEVEETEGLYVLVDDGPPEQWWYQFVPREP
Ga0190274_131120112	3300018476	Soil	RCVGGPSLSRLEHFPPALEVEERDGMYVLVDDGPPSSWWYQFIPHEL
Ga0190271_111060302	3300018481	Soil	MDDGDRMLIPCVGGPSTSRLVRYPPPHEIDERGGIYVLVDEGLPSMWHFEFVPSDR
Ga0190271_122606231	3300018481	Soil	MEDGERMLIPCQGGPSRSRLVRCPPPLEIEEDTGLYMLVDDGPPDGWRYAFVPRAPR
Ga0173481_107134942	3300019356	Soil	MLLPCDGGPSQSRLVRYPPPLEIEERNGTYVLVDDGPPEHWHYLFVPEVR
Ga0224508_104616522	3300022413	Sediment	MEPGDRMLIRCDSGGPSISRLVTYPPPFEIDVREGTYVLVDDGPAHLWRYLFIRSG
Ga0207687_104393672	3300025927	Miscanthus Rhizosphere	VPEPGERMLLPCDGGPSISRLVTYPPPLEIPERDGTYVLVDDGPPAQWSYTFLPHGP
Ga0207709_109483051	3300025935	Miscanthus Rhizosphere	MLLPCDGGPSISRLVTWPPPLEIVEHDGMYVLVDDGPPATWSYTFVPSEPS
Ga0207703_104893191	3300026035	Switchgrass Rhizosphere	VSPPDEPPAPEPGERMLLPCDGGPSISRLVTYPPPLEIPERDGTYVLVDDGPPAQWSYTFLPHGP
Ga0207675_1015675012	3300026118	Switchgrass Rhizosphere	LLPCDGGPSISRLVTYPPPLEIPERDGTYVLVDDGPPAQWSYTFLPHGP
Ga0209267_13265062	3300026331	Soil	MQPGERMFIPCQGGPSTSRLERYPPPLEVVERDGMYVLEDEGPPEQWRYLFVPREASR
Ga0214469_10278162	3300027636	Soil	MLIRCEGGPSASRLVRYPPPVEIEERGGVYVLVDDGHPATWWYDFVPHER
Ga0209490_105083132	3300027823	Freshwater	MEPGERMLLPCDGGPSQSRLVRYPPPLEIDVRYGQYVLLDDGPAERWRYVFVAATA
Ga0209591_100175614	3300027850	Freshwater	MEPGERMLLPCDGGPSQSRLVRYPPPLEIDARDGQYVLLDDGPAERWRYVFVAATA
Ga0209023_100128664	3300027870	Freshwater And Sediment	METGERMLIPCVGGPALSRLVVYPPPLEVPMRDGVYVLLDDGPVEEWCYEFVADSSSSDARR
Ga0209023_103414061	3300027870	Freshwater And Sediment	VRVRLADQALIPCDGGPCTSRLVRTPPPLEIPERAGTYVLVDDGPPERWRYHFVPST
Ga0209814_1000048510	3300027873	Populus Rhizosphere	VEAGERMLIRCEGGPSRSRLVRYPPPVEVVETEGLYVLVDDGPPEQWWYQFVPREL
Ga0209814_103490802	3300027873	Populus Rhizosphere	MLIRCEGGPSMSRLVRYPPPVEVEEETGMYVLVDDGPPESWWYAFVPHEL
Ga0209068_104942652	3300027894	Watersheds	MLIPCDGGPSISRLQRYPPPFEIHETDGMYVLVDDGPPQNWRYEFVPHSS
Ga0207428_103258703	3300027907	Populus Rhizosphere	VEPGQRMLIHCEGGPSQSRLARFPPPVEVKEDEGLYVLVDDGPPEGWWYQFVPREP
Ga0207428_104437261	3300027907	Populus Rhizosphere	RSVEAGERMLIRCEGGPSRSRLVRYPPPVEVVETEGLYVLVDDGPPEQWWYQFVPREL
Ga0209382_101210946	3300027909	Populus Rhizosphere	MLIRCEGGPSRSRLVRYPPPVEVEETEGLYVLVDDGPPEQWWYQFVPREL
Ga0209382_108456212	3300027909	Populus Rhizosphere	MLIRCEGGPSQSRLVRYPPPVEVEETQGLYVLVDDGPPEQWWYQFVPREV
Ga0209382_109573332	3300027909	Populus Rhizosphere	VEPGQRMLIHCEGGPSQSRLARFPPPVEVAEDEGLYVLVDDGPPEGWWYQFVPREP
Ga0247709_1015241	3300027998	Soil	MLVRCDGGPSASRLVKFPPPLEIPEKSGLYVLVDDGPVEDWFYVFVPRR
Ga0265334_101164992	3300028573	Rhizosphere	MVPGERMLIRCEGGPSTSRLVRFPPPLEAQERDGIYVLEDDGPIEQWRYVFVAHTV
Ga0307296_103929561	3300028819	Soil	MQPGDRMLIGCDGGPSISRLERFPPPLEIEERGGMYVLEDDGPPEQWQYVFVPDDYG
Ga0302298_101834551	3300029980	Fen	RMLIRCDRGPAISRLVTFPPPLEIAVAGGLYVLVDDGPPASWCYEFVPTDA
Ga0311334_104999032	3300029987	Fen	MLIWCDRGPSISRLVTFPPPLEIAVAGGLYVLVDDGPPESWCYEFVPTDA
Ga0311336_101587092	3300029990	Fen	MLIWCDRGPAISRLVTFPPPPEIAVAGGLYVLVDDGPPESWCYEFVPTDA
Ga0311337_104306112	3300030000	Fen	MLIWCDRGPAISRLVTFPPPLEIAVAGGLYVLVDDGPPASWCYEFVPTDA
Ga0311350_100332775	3300030002	Fen	SRPPEPGERMLLPCDGGPSISRLVKFPPPLEIDERDGMYVLVDDGPPTMWSYTFVPHEA
Ga0302299_100818753	3300030010	Fen	PRPPEPGERMLLPCDGGPSISRLVKFPPPLELDERDGLYVLVDDGPPTMWSYTFVPHEA
Ga0311348_104058272	3300030019	Fen	MLIWCDRGPAISRLVTFPPPPEIAVAGGLYVLVDDGPPESWCY
Ga0311349_101425884	3300030294	Fen	PPEPGERMLLPCDGGPSISRLVKFPPPLELDERDGLYVLVDDGPPTMWSYTFVPHEA
Ga0247826_101535501	3300030336	Soil	MEPGERMLIRCEGGPSTSRLERFPPPLEIEERGGTYVLDDDGPPEQWQYVFVANEL
Ga0311360_101821292	3300030339	Bog	VPEVGERMLIWCDRGPAISRLVTFPPPLEIAVAGGLYVLVDDGPPASWCYEFVPTDA
Ga0268386_102744042	3300030619	Soil	MLIRCEGGPSASRLVRYPPPVEIEERGGVYVLIDDGHPATWWYDFVPHER
Ga0268386_107617711	3300030619	Soil	QEGERMLIRCEGGPSASRLVRYPPPVEIEERGGVYVLVDDGHPATWWYDFVPHER
Ga0311335_101123113	3300030838	Fen	MLIRCDRGPAISRLVTFPPPLEIAVAGGLYVLVDDGPPASWCYEFVPTDA
Ga0311335_106593022	3300030838	Fen	MEPGERMLIPCTGNGPSISRLVTFPPPLEIELDHDGGMYVLEDDGEPEGWTYAFVPNPAS
Ga0307495_102585222	3300031199	Soil	VNEPDPPGPRTPEHGERMLLPCDGGPSISRLVTYPPPLEIVEPDGMYVLVDDGPPATWSYTF
Ga0299914_105232653	3300031228	Soil	VEPGERMLLPCDGGPSQSRLVRFPPPVEIEEREGIYVLVDEGPPEGWRYEFVPDAG
Ga0299913_104472202	3300031229	Soil	MLIRCQGGPSASRLVRFPPPVEIEERGGVYVLVDDGPASAWWYDYVPHDR
Ga0311364_102773353	3300031521	Fen	PCDGGPSISRLVKFPPPLELDERDGLYVLVDDGPPTMWSYTFVPHEA
Ga0311364_112861902	3300031521	Fen	HDGGVPEVGERMLIRCDRGPAISRLVTFPPPLEIAVAGGLYVLVDDGPPASWCYEFVPTD
Ga0307408_1012906082	3300031548	Rhizosphere	LQEGERLLIRCEGGPSTSRLERFPPPLEVEEKDGMYVLVDDGPPTEWRYVFVPREP
Ga0307374_1001159311	3300031670	Soil	MAGMERGERMLIPCAGGGPCTSRLENYPPPLEIQVRGGMYILVDDGLPDRWRYDWVPDRP
Ga0302321_1000268021	3300031726	Fen	MLIWCDRGPAISRLVTFPPPLEIAVAGGLYVLVDDGPPASW
Ga0307410_101861393	3300031852	Rhizosphere	MLIACVGGPSVSRLVRAPPPLEIAERGGIYVLVDDGPPEAWR
Ga0306919_107291891	3300031879	Soil	LHPGDRFFIRCEGGPSTSRLEAFPPRLEVEESDGVYVLDDDGRRDQWRYLFVPRPG
Ga0311367_112653152	3300031918	Fen	GPSISRLVTFPPPLEIAVAGGLYVLVDDGPPASWCSEFVPTDA
Ga0311367_119007472	3300031918	Fen	RMLIWCDRGPAISRLVTFPPPLEIAVAGGLYVLVDDGPPASWCYEFVPTDA
Ga0307416_1011790192	3300032002	Rhizosphere	AGRRGLVDGGGPPPPAPGVRMLVGCDGGPSQGRLVRFPPPLEIAERGGMYVLIDDGPPHEWRYRFLPDEP
Ga0307415_1002002313	3300032126	Rhizosphere	ERMLVGCDGGPSQGRLVRFPPPLEIAERGGMYVLIDDGPPHEWRYRFLPDEP
Ga0307415_1015013091	3300032126	Rhizosphere	MLLPCDGGPSISRLVTYPPPAEIHERGGTYVLVDDGPPEHWRYDFVAKEL
Ga0311301_103023182	3300032160	Peatlands Soil	MFVPCQGGPSTSRLEIYPPPLEIEEREGIYVLEDDGPPEQWRYLFVPHSI
Ga0335075_113833392	3300032896	Soil	MSGVEEGDRMLIPCEGGGPSISRLVRFPPPLEIEEREGVYVLVDDGPPERWRYAFVRPAR
Ga0335071_100753352	3300032897	Soil	MLIPCEGGGPSTSRPVVYPPPLEIQEQGGTYVLVDDGPPERWRYEFVQADG
Ga0326726_114469712	3300033433	Peat Soil	VSGSPDPPMPGSRTPEPGERMLLPCDGGPSISRLVTFPPPLEIPEHDGTYVLVDNGLRRTGPT
Ga0370481_0050209_239_391	3300034281	Untreated Peat Soil	MLLPCGGGPSLSRLVTFPPPLEIDERDGVYVLVDDGPPPTWSYTFVPHEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048419

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences