Metagenome Family F048409

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048409
Family Type	Metagenome
Number of Sequences	148
Average Sequence Length	88 residues
Representative Sequence	MRYRYRLTNPPKALLKARLDNIAIVPASLLGVKALWQTAANTLPKGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPVEQVAYR
Number of Associated Samples	79
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.81 %
% of genes near scaffold ends (potentially truncated)	39.19 %
% of genes from short scaffolds (< 2000 bps)	85.81 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.595 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (35.135 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.405 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.90% β-sheet: 11.21% Coil/Unstructured: 56.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00589	Phage_integrase	41.22
PF02899	Phage_int_SAM_1	11.49
PF13340	DUF4096	0.68
PF08241	Methyltransf_11	0.68
PF12840	HTH_20	0.68
PF10282	Lactonase	0.68
PF01610	DDE_Tnp_ISL3	0.68
PF13358	DDE_3	0.68
PF00691	OmpA	0.68
PF13546	DDE_5	0.68
PF02369	Big_1	0.68
PF04389	Peptidase_M28	0.68
PF01609	DDE_Tnp_1	0.68
PF14319	Zn_Tnp_IS91	0.68
PF00027	cNMP_binding	0.68
PF13545	HTH_Crp_2	0.68
PF07681	DoxX	0.68
PF00571	CBS	0.68
PF00078	RVT_1	0.68
PF00775	Dioxygenase_C	0.68
PF02604	PhdYeFM_antitox	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	11.49
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	11.49
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.68
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.68
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.68
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.68
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.68
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.68
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.68
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.68
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.68
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.68
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.68
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.27 %
Unclassified	root	N/A	29.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.27 %
Unclassified	root	N/A	29.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.59 %
Unclassified	root	N/A	29.73 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.68 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.41 %
Unclassified	root	N/A	29.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.68 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.68 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.68 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.68 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	54.05 %
Unclassified	root	N/A	29.73 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.35 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.68 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.68 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.68 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.35 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.35 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.68 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.68 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.35 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.68 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	0.68 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.68 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.68 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.68 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.35 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.68 %
Candidatus Levybacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Levybacteria	0.68 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.68 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.68 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.68 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.35 %
Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_37_33	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Levybacteria → Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_37_33	0.68 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.68 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.68 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.68 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.68 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000044\|ARSoilOldRDRAFT_c005093	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300000571\|JGI1358J11329_10117264	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Levybacteria → Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_37_33	828	Open in IMG/M
3300000955\|JGI1027J12803_101134118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1361	Open in IMG/M
3300000955\|JGI1027J12803_102071806	Not Available	736	Open in IMG/M
3300005179\|Ga0066684_11112573	Not Available	505	Open in IMG/M
3300005186\|Ga0066676_10718695	Not Available	680	Open in IMG/M
3300005289\|Ga0065704_10254964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	979	Open in IMG/M
3300005289\|Ga0065704_10577187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	620	Open in IMG/M
3300005294\|Ga0065705_10002405	All Organisms → cellular organisms → Bacteria	9748	Open in IMG/M
3300005294\|Ga0065705_10126032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2673	Open in IMG/M
3300005294\|Ga0065705_10176169	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300005294\|Ga0065705_10178452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1602	Open in IMG/M
3300005294\|Ga0065705_10253266	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300005294\|Ga0065705_10285930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1090	Open in IMG/M
3300005294\|Ga0065705_10311026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1031	Open in IMG/M
3300005294\|Ga0065705_10810296	Not Available	606	Open in IMG/M
3300005295\|Ga0065707_10048421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	951	Open in IMG/M
3300005295\|Ga0065707_10347277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	924	Open in IMG/M
3300005332\|Ga0066388_101076689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1358	Open in IMG/M
3300005332\|Ga0066388_102197614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	996	Open in IMG/M
3300005562\|Ga0058697_10471361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	636	Open in IMG/M
3300005764\|Ga0066903_105313593	Not Available	681	Open in IMG/M
3300005764\|Ga0066903_105983297	Not Available	637	Open in IMG/M
3300005764\|Ga0066903_108150114	Not Available	536	Open in IMG/M
3300005937\|Ga0081455_10034673	All Organisms → cellular organisms → Bacteria	4519	Open in IMG/M
3300006049\|Ga0075417_10016690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2862	Open in IMG/M
3300006049\|Ga0075417_10030811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2221	Open in IMG/M
3300006194\|Ga0075427_10004076	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300006796\|Ga0066665_10819596	Not Available	731	Open in IMG/M
3300006844\|Ga0075428_100083355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3488	Open in IMG/M
3300006844\|Ga0075428_100093841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3272	Open in IMG/M
3300006844\|Ga0075428_100162197	All Organisms → cellular organisms → Bacteria	2426	Open in IMG/M
3300006844\|Ga0075428_100445192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1388	Open in IMG/M
3300006844\|Ga0075428_100724016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1059	Open in IMG/M
3300006844\|Ga0075428_100858686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	963	Open in IMG/M
3300006844\|Ga0075428_102313071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	553	Open in IMG/M
3300006845\|Ga0075421_100252903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2159	Open in IMG/M
3300006845\|Ga0075421_100835152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1057	Open in IMG/M
3300006845\|Ga0075421_100950238	Not Available	977	Open in IMG/M
3300006845\|Ga0075421_100990012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	953	Open in IMG/M
3300006845\|Ga0075421_101399777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	770	Open in IMG/M
3300006845\|Ga0075421_101837946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	650	Open in IMG/M
3300006846\|Ga0075430_101221334	Not Available	619	Open in IMG/M
3300006846\|Ga0075430_101399083	Not Available	575	Open in IMG/M
3300006847\|Ga0075431_100490302	Not Available	1221	Open in IMG/M
3300006852\|Ga0075433_10304347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1411	Open in IMG/M
3300006852\|Ga0075433_10496148	Not Available	1075	Open in IMG/M
3300006853\|Ga0075420_101259486	Not Available	635	Open in IMG/M
3300006853\|Ga0075420_101691224	Not Available	542	Open in IMG/M
3300006854\|Ga0075425_101446410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	777	Open in IMG/M
3300006854\|Ga0075425_102121752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	627	Open in IMG/M
3300006904\|Ga0075424_102685534	Not Available	520	Open in IMG/M
3300009012\|Ga0066710_101500348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1040	Open in IMG/M
3300009094\|Ga0111539_10075774	All Organisms → cellular organisms → Bacteria	3962	Open in IMG/M
3300009094\|Ga0111539_13061255	Not Available	540	Open in IMG/M
3300009100\|Ga0075418_10058020	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	4137	Open in IMG/M
3300009100\|Ga0075418_10573748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1213	Open in IMG/M
3300009100\|Ga0075418_10882272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	967	Open in IMG/M
3300009100\|Ga0075418_12977158	Not Available	516	Open in IMG/M
3300009147\|Ga0114129_10068352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4954	Open in IMG/M
3300009147\|Ga0114129_10274676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2254	Open in IMG/M
3300009147\|Ga0114129_11120815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	984	Open in IMG/M
3300009147\|Ga0114129_12810747	Not Available	578	Open in IMG/M
3300009147\|Ga0114129_12918870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	565	Open in IMG/M
3300009147\|Ga0114129_13046199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	550	Open in IMG/M
3300009147\|Ga0114129_13089447	Not Available	545	Open in IMG/M
3300009162\|Ga0075423_10295546	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1697	Open in IMG/M
3300009840\|Ga0126313_10609452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	880	Open in IMG/M
3300009840\|Ga0126313_11342041	Not Available	592	Open in IMG/M
3300009840\|Ga0126313_11459841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	568	Open in IMG/M
3300009840\|Ga0126313_11750670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	519	Open in IMG/M
3300010038\|Ga0126315_10300894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	990	Open in IMG/M
3300010038\|Ga0126315_10354321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	915	Open in IMG/M
3300010038\|Ga0126315_10463859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	804	Open in IMG/M
3300010038\|Ga0126315_11063124	Not Available	545	Open in IMG/M
3300010041\|Ga0126312_10233010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1291	Open in IMG/M
3300010041\|Ga0126312_10251009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1243	Open in IMG/M
3300010041\|Ga0126312_10637483	Not Available	767	Open in IMG/M
3300010041\|Ga0126312_10935894	Not Available	632	Open in IMG/M
3300010042\|Ga0126314_10106344	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300010042\|Ga0126314_10754838	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300010042\|Ga0126314_11221398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	562	Open in IMG/M
3300010042\|Ga0126314_11395026	Not Available	526	Open in IMG/M
3300010046\|Ga0126384_12190864	Not Available	532	Open in IMG/M
3300010047\|Ga0126382_12368419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	515	Open in IMG/M
3300010361\|Ga0126378_12321902	Not Available	612	Open in IMG/M
3300010366\|Ga0126379_10340640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1525	Open in IMG/M
3300010366\|Ga0126379_11600766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	757	Open in IMG/M
3300012198\|Ga0137364_11021413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	624	Open in IMG/M
3300012201\|Ga0137365_10286567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1222	Open in IMG/M
3300012202\|Ga0137363_10883176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	759	Open in IMG/M
3300012208\|Ga0137376_10736536	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	850	Open in IMG/M
3300012209\|Ga0137379_10699721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	919	Open in IMG/M
3300012212\|Ga0150985_104235271	Not Available	666	Open in IMG/M
3300012212\|Ga0150985_106854388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	615	Open in IMG/M
3300012212\|Ga0150985_107635341	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300012356\|Ga0137371_10846876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	696	Open in IMG/M
3300012361\|Ga0137360_10017442	All Organisms → cellular organisms → Bacteria → Proteobacteria	4721	Open in IMG/M
3300012362\|Ga0137361_10026742	All Organisms → cellular organisms → Bacteria → Proteobacteria	4500	Open in IMG/M
3300012469\|Ga0150984_106155611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	776	Open in IMG/M
3300012971\|Ga0126369_12455102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	607	Open in IMG/M
3300013306\|Ga0163162_12520401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	591	Open in IMG/M
3300014488\|Ga0182001_10333044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	630	Open in IMG/M
3300015371\|Ga0132258_11750825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1567	Open in IMG/M
3300015373\|Ga0132257_102626990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	655	Open in IMG/M
3300016294\|Ga0182041_11419257	Not Available	638	Open in IMG/M
3300016357\|Ga0182032_10820654	Not Available	787	Open in IMG/M
3300016357\|Ga0182032_10955022	Not Available	731	Open in IMG/M
3300016357\|Ga0182032_11603781	Not Available	566	Open in IMG/M
3300016371\|Ga0182034_10952926	Not Available	740	Open in IMG/M
3300016387\|Ga0182040_10318301	Not Available	1196	Open in IMG/M
3300018468\|Ga0066662_11544726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	691	Open in IMG/M
3300021560\|Ga0126371_11869387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	720	Open in IMG/M
3300025910\|Ga0207684_11441164	Not Available	562	Open in IMG/M
3300027873\|Ga0209814_10004717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5166	Open in IMG/M
3300027873\|Ga0209814_10017653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2871	Open in IMG/M
3300027873\|Ga0209814_10054867	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300027880\|Ga0209481_10019861	All Organisms → cellular organisms → Bacteria	2965	Open in IMG/M
3300027880\|Ga0209481_10071993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1635	Open in IMG/M
3300027909\|Ga0209382_10219359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2172	Open in IMG/M
3300027909\|Ga0209382_10367887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1607	Open in IMG/M
3300027909\|Ga0209382_10714672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1076	Open in IMG/M
3300027909\|Ga0209382_10829673	Not Available	981	Open in IMG/M
3300027909\|Ga0209382_11000945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	871	Open in IMG/M
3300027909\|Ga0209382_11049272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	846	Open in IMG/M
3300027909\|Ga0209382_11371012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	712	Open in IMG/M
3300028587\|Ga0247828_11135653	Not Available	519	Open in IMG/M
3300031573\|Ga0310915_10641344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	752	Open in IMG/M
3300031719\|Ga0306917_10059731	All Organisms → cellular organisms → Bacteria	2599	Open in IMG/M
3300031744\|Ga0306918_10915776	Not Available	683	Open in IMG/M
3300031852\|Ga0307410_11055382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	703	Open in IMG/M
3300031879\|Ga0306919_10805999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	722	Open in IMG/M
3300031912\|Ga0306921_10529099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1369	Open in IMG/M
3300031942\|Ga0310916_11625306	Not Available	524	Open in IMG/M
3300031946\|Ga0310910_11106851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	617	Open in IMG/M
3300031947\|Ga0310909_11587938	Not Available	519	Open in IMG/M
3300031995\|Ga0307409_102275846	Not Available	571	Open in IMG/M
3300031995\|Ga0307409_102960049	Not Available	501	Open in IMG/M
3300032002\|Ga0307416_100232390	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300032002\|Ga0307416_101129090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	889	Open in IMG/M
3300032002\|Ga0307416_102494928	Not Available	616	Open in IMG/M
3300032004\|Ga0307414_12097736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	528	Open in IMG/M
3300032013\|Ga0310906_11465947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	502	Open in IMG/M
3300032075\|Ga0310890_10339664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1094	Open in IMG/M
3300032076\|Ga0306924_10794577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1055	Open in IMG/M
3300032076\|Ga0306924_11139050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	848	Open in IMG/M
3300032159\|Ga0268251_10268864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	696	Open in IMG/M
3300033289\|Ga0310914_11390061	Not Available	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.35%
Host-Associated	Host-Associated	48.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.68%
Plants	Host-Associated → Plants	48.65%
Aquatic	Environmental → Aquatic	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	41.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.08%
Phylloplane	Host-Associated → Plants → Phylloplane	1.35%
Freshwater	Environmental → Aquatic → Freshwater	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	39.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.73%
Loam	Environmental → Terrestrial → Soil → Loam	4.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.35%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.35%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	39.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.35%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.68%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	35.14%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	10.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.11%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	6.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.03%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.35%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.35%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.35%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000571	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARSoilOldRDRAFT_0050931	3300000044	Arabidopsis Rhizosphere	MCDRRLKNSRFYGYHLTRPPKALLKAKLDNIAIVPASLLPFKTTWQRAANKLPKRGVLLCHSKKNTRQRKLLE
JGI1358J11329_101172642	3300000571	Groundwater	LKAKLDNIAIVPASMLPFKATWQKLANNLPNGSVLIYHSSTNTQQRKILESVEDSFRAKGHAVTNLPVEQTR*
JGI1027J12803_1011341183	3300000955	Soil	MMRYSYNRGYRYRLTNPPKALFKARMDNIAIVPASLLGLKALWQTTANTLPQGGVLLCHSQQNTRQRKLVERIGETFRQQGHTVMNLPVEQVAL*
JGI1027J12803_1020718061	3300000955	Soil	HEHMMRYRHNRGDRYRLTNPPQVILNAQLDNIAIVPASLLGMKALWQTAANTLPKGGVLLCHTQQNIRQRKLLERIGETFRQQGHTVMNLPIEQVAYR*
Ga0066684_111125731	3300005179	Soil	MRYRYNRSYKYRFTNPPKALWKARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVEKSLKQHGHAVMNLPVEQVVYWGY*
Ga0066676_107186951	3300005186	Soil	RLTNPPKALLKARLDNIAIVPASMLPLTETLKEKVNTLPKGAVVLCYVAENTRQRKLLERVGETFRQHGHAVMNLPVEQVAYR*
Ga0065704_102549642	3300005289	Switchgrass Rhizosphere	MMRYRHNRGYRYGFTNPPQAILNAQLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0065704_105771872	3300005289	Switchgrass Rhizosphere	MRYRFNKGYRYRFTNPPRALLKARLDNIAIVPASLLGVKALWQTAANTLPKGGVLLCHTQQNTRQRKLLERIGETFRQQGHAVMNL
Ga0065705_100024057	3300005294	Switchgrass Rhizosphere	MRYRYNRAYRYRLTNPPQALLSARLDNIAIVPASLLGVKALWQTAANTLPRGGVLLCHTQQNTRQRRLLERVGETFREQGHVVRSLSVGEVYKTTPHL*
Ga0065705_101260323	3300005294	Switchgrass Rhizosphere	MMRYRHHKGHRYRFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0065705_101761692	3300005294	Switchgrass Rhizosphere	MRYRFNKGYRYRFTNPPRALLKARLDNIAIVPASLLGVKALWQTAANTLPKGGVLLCHTQQNTRQRKLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0065705_101784521	3300005294	Switchgrass Rhizosphere	WQTERQKGDAGHKFMRYRYRLTNPPKALLKARMDNIAIVPASMLGLKALWQVAANTLPTGGVLLCHSQQNTRQRTLLERIGETFRQQGHAVMHLPIEQVAYR*
Ga0065705_102532661	3300005294	Switchgrass Rhizosphere	MRYRYRLTKPPKALLKARMDNIAIVPASMLGLKALWQVAANTLPTGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPVKQVAY*
Ga0065705_102859302	3300005294	Switchgrass Rhizosphere	MRYSYNRGYRYRFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPVEQVAYR*
Ga0065705_103110261	3300005294	Switchgrass Rhizosphere	MRHSYNRGYRYRLTNPPKALLKARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVEESLKQHGHAVMNLPVEQVAYP*
Ga0065705_108102961	3300005294	Switchgrass Rhizosphere	YAGHKFSMSYTVNKPYRHRLTHPPQALRKARLDNIAIVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQKKLLERIGEIFRQHGHAVMNLPMEQGVYR*
Ga0065707_100484212	3300005295	Switchgrass Rhizosphere	MMRYRHHKGHRYRFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAHR*
Ga0065707_103472771	3300005295	Switchgrass Rhizosphere	MNPPKALLKARMDNIAIVPASMLGLKALWQTAANTLPTGGVLLCHSQQNTRQRRLLERIGETFRQQGHAVMNLPVEQVAYR*
Ga0066388_1010766893	3300005332	Tropical Forest Soil	MMRFRHNKGHRYRFTNPPQTILNARLDNIAIVPASLLGLKALWQTAANTLPEGGVLLCHSQQNARQRRLLERIGETF
Ga0066388_1021976142	3300005332	Tropical Forest Soil	MDNIAIVPASLLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHTVMNLPIEQVA*
Ga0058697_104713613	3300005562	Agave	MRNAYRKPFRYKLTNPPKALLKAKLDNIAIVPASMLPLKSLWQMAANTLPRGGVLLCHSQQNSRQRKLLERVEETFRAQGHAVMNLPI
Ga0066903_1053135932	3300005764	Tropical Forest Soil	NIAIVPASLLGLKALWQTTANTLPEGGVLLCHTQQNIRQRRLLERIGETFRQQGHAVMHLPVEHGAY*
Ga0066903_1059832971	3300005764	Tropical Forest Soil	MDNIAIVPASLLGVKALWQTTANTLPAGGVLLCPSRQNTRQCKLLERVGEAFRQQGHAVINLPIEQVASR*
Ga0066903_1081501141	3300005764	Tropical Forest Soil	IVPASMLGMKALWQTAANTLPKGGVLLCHTEQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0081455_100346732	3300005937	Tabebuia Heterophylla Rhizosphere	MMRYRHNRGYRYRRFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0075417_100166903	3300006049	Populus Rhizosphere	MRYRYNRGYRYRLTNPPKALLKARLDNIAIVPASLLGVKALWQTAANNLPKGGVLLCHTQQNTRQRKLLERVSETFRQHGHAVMNLPVEHVAY*
Ga0075417_100308112	3300006049	Populus Rhizosphere	MMRYRYHRGNRYRFTNPPKAILNARLDNIAIVPASMLPFKTTWQKTANKLPKRGVLLCHSRKNTRQKKLLEQVEEVFKRLGYAVMNLPIEQVV*
Ga0075427_100040761	3300006194	Populus Rhizosphere	MSYTVNKPYRYRLTHPPQALRKARLDNIAIVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVGETFRE
Ga0066665_108195961	3300006796	Soil	NIAIVPASMLGLKALWQTTANTLPKGGVLLCHFQQNTRQRRLLERVGETFRQHGHAVMNLPVEQVAYR*
Ga0075428_1000833552	3300006844	Populus Rhizosphere	MRYRYNRSFRYRLTNPPRALLNAQMDNIAIVPASMLGLKALWQTAANTLPKGGVLLCHSQQNTRQRKLVERIGETFKQQGHVVRSLSMREL*
Ga0075428_1000938414	3300006844	Populus Rhizosphere	MRYRYNRGYRYRWTKPPKALLKARMDNIAIVPASLLGLKALWQTAANTLPQGGVLLCHSLQNTRQRKLLERVGETFRQHGHVVRSLSLREVSTTTPNL*
Ga0075428_1001621972	3300006844	Populus Rhizosphere	MRYRYRLTNPPKAILKARLDNIAIVPASMLGLKALWQTTANTLPLGGVLLCHSPKNTRQRKLLERVGETFRQHGHAVMQLPVEQGGTS*
Ga0075428_1004451921	3300006844	Populus Rhizosphere	MMRYRHNRGDRYRLTNPPQVILNAQLDNIAIVPASLLGMKALWQTAANTLPKGGVLLCHTQQNIRQRKLLERIGETFRQQGHTVMNLPIEQVAYR*
Ga0075428_1007240162	3300006844	Populus Rhizosphere	MSYTVNKPYRYRLTHPPQALLKARLDNIAIVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQKKLLERIGETFRQHGHAVMNLPVEQGVYR*
Ga0075428_1008586862	3300006844	Populus Rhizosphere	MRYRYNRGYRYRLTNPPKALLKARMDNIAIVPASLLGVKTLWQTTANTLPQGGVLLCHSEQNTRQRRLLERVGETFRQQGHAVMNLSIEQVAYH*
Ga0075428_1023130712	3300006844	Populus Rhizosphere	MMQYRYNRGYRYRLTTRPPKALLKAQMDNIAIVPASLLGVKALWQTAANTLPQGGVLLCHSQQNARQQRLLERVGETFRQQGHAVLHLPVGQGALYESTI
Ga0075421_1002529032	3300006845	Populus Rhizosphere	VILNAQLDNIAIVPASLLGMKALWQTAANTLPKGGVLLCHTQQNIRQRKLLERIGETFRQQGHTVMNLPIEQVAYR*
Ga0075421_1008351522	3300006845	Populus Rhizosphere	MSYTVNKPYRYRLTHPPQALRKARLDNIAIVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQKKLLERIGETFRQHGHAVMNLPVEQGVYR*
Ga0075421_1009502382	3300006845	Populus Rhizosphere	LKARLDNIAIVPASMLGLKALWQKAANTLPQGGVLLCHSQQNTRQRKLLERVGETFRQHGHAVMNLPVEQGV*
Ga0075421_1009900122	3300006845	Populus Rhizosphere	MMRYRHNRGYRYRLTNPPQALLKARMDNIAIVPASLLGVKTLWQTTANTLPQGGVLLCHSQQNMRQRRLLERVGETFRQQGHAVMNLSIEQVAYR*
Ga0075421_1013997771	3300006845	Populus Rhizosphere	MMRYSHNKGYRYRLANPPKALLKARLDNIAIVPASLLGVKALWQTAANTLPKGGVLLCHTQQNTRQRKLLERIGESFRQQGHKVMHLPVEQGGVISLHL*
Ga0075421_1018379462	3300006845	Populus Rhizosphere	MMKYKHNRGYRYRLINPPKAILNARLDNIAIVPASLLPLMETVKAKVNMLPEGGVLLCHSQQNTRQRRLLERVGETFRQHGHAVLHLPIEQGAL*
Ga0075430_1012213341	3300006846	Populus Rhizosphere	AGHKFMRYRYRLTNPPKAILKARLDNIAIVPASMLGLKALWQTTANTLPLGGVLLCHSPKNTRQRKLLERVGETFRQHGHAVMQLPVEQGGTS*
Ga0075430_1013990831	3300006846	Populus Rhizosphere	KARLDNIAIVPASLLGVKALWQTAANNLPKGGVLLCHTQQNTRQRKLLERVSETFRQHGHAVMNLPVEHVAY*
Ga0075431_1004903021	3300006847	Populus Rhizosphere	SWQTERQKDHAGHKFMRYRLTNPPKALLKARLDNIAIVPASMLGLKALWQVAANALPTGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPVEQVAYH*
Ga0075433_103043473	3300006852	Populus Rhizosphere	MSYRYNRPFRYRLTNPPKALLKARMDNIAIVPASMLGLRALWQTTANTLPQGGVLLCHSQQNTRQRKLLERIGETFRQQGHTVMNLPVEQVAL*
Ga0075433_104961482	3300006852	Populus Rhizosphere	LDNIAIVPASLLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGQTFRQQGHAVMNLPIEQVAYR*
Ga0075420_1012594861	3300006853	Populus Rhizosphere	RLDNIAIVPASLLGVKALWQTAANNLPKGGVLLCHTQQNTRQRKLLERVSETFRQHGHAVMNLPVEHVAY*
Ga0075420_1016912242	3300006853	Populus Rhizosphere	MRYRYNRGYRYRWTKPPKALLKARMDNIAIVPASLLGLKALWQTAANTLPQGGVLLCHSLQNTRQRKLLERVGETFRQ
Ga0075425_1014464102	3300006854	Populus Rhizosphere	MRYRYRLTNPPKALLKTRMDNIAIVPASMLGLKALWQVAANTLPMGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0075425_1021217522	3300006854	Populus Rhizosphere	MDNIAIVPASMLGLKALWQTAANTLPKGGVLLCHSQQNTRQRKLVERIGETFKQQGHVVRSLSMREL*
Ga0075424_1026855342	3300006904	Populus Rhizosphere	AGHKFMRYRLTNPPKALLKARLDNIAIVPASMLGLKALWQVAANALPTGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0066710_1015003481	3300009012	Grasslands Soil	MNPPKALLKARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPVEQVAYR
Ga0111539_100757744	3300009094	Populus Rhizosphere	MMRNRYNRGYRLTNPPKALLKARMDNIAIVPASLLGVKALWQMAANTLPQGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPVKQVAY*
Ga0111539_130612551	3300009094	Populus Rhizosphere	IVPAGMLGLKALWQVAANTLPTGGVLLCHSQQNTRQRKLLERIGETFRQQGHTVMNLPIEQVAYR*
Ga0075418_100580203	3300009100	Populus Rhizosphere	LTNPPKALLKARLDNIAIVPASLLGVKALWQTAANNLPKGGVLLCHTQQNTRQRKLLERVSETFRQHGHAVMNLPVEHVAY*
Ga0075418_105737482	3300009100	Populus Rhizosphere	MMQYRYNRGYRYRLTTRPPKALLKAQMDNIAIVPASLLGVKALWQTAANTLPQGGVLLCHSQQNARQQRLLERVGETFRQQGHAVLHLPVGQGALYESTI*
Ga0075418_108822722	3300009100	Populus Rhizosphere	MMRNRYNRGYRLTNPPKALLKARMDNIAIVPASLLGVKALWQMAANTLPQGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLSVKQVAGNRERRSRKPG*
Ga0075418_129771581	3300009100	Populus Rhizosphere	RHNRGYRITNPPIALLKARMDNIAIVPASLLGLKALWQIAANALPQGGVLLCHSQQNTRQRKLLERIGETFRKQGHAVMHLPIE*
Ga0114129_100683522	3300009147	Populus Rhizosphere	MMRYRHNKGYVYRLTNPPRTLLKARLDNIAIVPASMLGMKSLWQTAANTLPKGGVLLCHTHQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0114129_102746763	3300009147	Populus Rhizosphere	MDNIAIVPASMLGLRALWQTTANTLPQGGVLLCHSQQNTRQRKLLERIGETFRQQGHTVMNLPVEQVAL*
Ga0114129_111208151	3300009147	Populus Rhizosphere	MRYRNNRGYRYRLTNPPKAILKARLDNIAIVPASMLGLKALWQKAANTLPQGGVLLCHSQQNTRQRKLLERVGETFRQHGHAVMNLPVEQGV*
Ga0114129_128107471	3300009147	Populus Rhizosphere	YRYTRSYKYRFTNPPKAILNARMDNIAIVPASMLPLTETLKEKVNTLPKGGVLLCHTQQNTRQRRLLERIGETFRQHGHAVLNLPVEQVAYR*
Ga0114129_129188702	3300009147	Populus Rhizosphere	MDNIAIVPASMLPLMETLKEKVNTLPKGGVLLCHSQQNTRQRRILERVGETFRQQGHAVMNLPVEQVAYR*
Ga0114129_130461992	3300009147	Populus Rhizosphere	MMRYRHNRGYRITNPPIALLKARMDNIAIVPASLLGLKALWQIAANALPQGGVLLCHSQQNTRQRKLLERIGETFRKQGHAV
Ga0114129_130894471	3300009147	Populus Rhizosphere	RALLKARLDNIAIVPASMLPLTETLKEKVNTLPQGGVVLCYAAENTRQRKLLERVGETFRQHGHAVMQLPVEQGSTS*
Ga0075423_102955461	3300009162	Populus Rhizosphere	MRYRYRLTNPPKALLKTRMDNIAIVPASMLGLKALWQVAANTLPMGGVLLCHSQQNTRQRKLLERIGETFRQQGHTVMNLPIEQV
Ga0126313_106094522	3300009840	Serpentine Soil	MRFRYNRGYQYRLTNPPKALLKARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVGETFRQHGHVVMHLSMGEVYTKSRNC*
Ga0126313_113420412	3300009840	Serpentine Soil	DNIAIVPASLLGLKALWQTAANTMPQGGVLLCHSQQNTRQRKLLERVGETFRQQGHMVMNLPVEQVYKNTPNF*
Ga0126313_114598411	3300009840	Serpentine Soil	MRYRNNRGYRYRLTNPPKALLKARLDNIAIVPASLLGLKALWQTAANTLPQGGVLLCHSQQNTRQQKLLERVGEAFRKQG
Ga0126313_117506701	3300009840	Serpentine Soil	MRYRYTRGYRYRLTNPPKPLLKARMDNIAIVPASMLGLKALWQTAANTLPKGGVLLCHSQQNTRQRKLLERVEETFRQQGHAVMNLPVEQVAYR*
Ga0126315_103008942	3300010038	Serpentine Soil	MRYRYRLTNPPKAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHSQQNIRQRKILERVEETFRQQGHAVLNLPVEQGAL*
Ga0126315_103543211	3300010038	Serpentine Soil	MRYRNNRGYRYRLTNPPKALLKARLDNIAIVPASLLGLKALWQTAANTLPQGGVLLCHSQQNTRQQKLLERVGEAFRKQGHAVMQLPVDQGAYR*
Ga0126315_104638591	3300010038	Serpentine Soil	MRQHDKQSYRYRLTNPPKALLKARLDNIAIVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVEESLKQHGHAVMNLPVEQVVYWGY*
Ga0126315_110631242	3300010038	Serpentine Soil	NPPKALLKARLDNIAIVPASMLGLKALWQTTANTLPKGGVLLCHSRQNTRQRRILERVGETFRQQGHAVMHLPVEQGAL*
Ga0126312_102330102	3300010041	Serpentine Soil	MRQHDKQSYRYRLTNPPKALLKARLDNIAIVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVGETFRQHGHVVMHLSMGEVYTKSRNC*
Ga0126312_102510092	3300010041	Serpentine Soil	MRYRFNRGYRYRLTNPPKAVLKARLDNIAIVPASLLGLKALWQTVANTLPQGGVLLCHSQQNTRQRKLLERVEESLKQHGHAVMNLPVELVAHS*
Ga0126312_106374832	3300010041	Serpentine Soil	VAQVKIRYKKPYRYRLTNPPKALLKARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQKKLLERVGETFRQHGHVVMNLPVEQGADR*
Ga0126312_109358941	3300010041	Serpentine Soil	QGIPDRLTNPPKALLKARMDNIAIVPASMLGLKALWQAAANTLPQGGVLLCHSQQNTRQRKLLERVEETFRQQGHAVMNLPVDHSAYR*
Ga0126314_101063442	3300010042	Serpentine Soil	MRQHDKQSYRYRLTNPPKALLKARLDNIALVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVGETFRQHGHVVMHLSMGEVYTKSRNC*
Ga0126314_107548381	3300010042	Serpentine Soil	ARLDNIAIVPASLLGLKALWQTAANTLPQGGVLLCHSQRNPRQRKLLERVGETLKQHGHAVLNLPVEQGAL*
Ga0126314_112213982	3300010042	Serpentine Soil	MTRPPKALLKAKLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVEESLKQHGHAVMNLPVEQVAYP*
Ga0126314_113950261	3300010042	Serpentine Soil	LLNARRNNMAIVPASLLPLKALWQMAANTLPKGGVLLCHTQQNTRQRKILERVGETFRQHGHAVMNLPVEQVAPSASFTHRAKR*
Ga0126384_121908641	3300010046	Tropical Forest Soil	YRYNRGNRYRITNTPKALLKARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVINLPIEQVASR*
Ga0126382_123684192	3300010047	Tropical Forest Soil	MMRYRHNRGYRYRCTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0126378_123219021	3300010361	Tropical Forest Soil	TNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVSYR*
Ga0126379_103406401	3300010366	Tropical Forest Soil	MRYGYKKPLRYRLTNPPKALMKARMDNIAIVPASLLGVKALWQTTANTLPAGGVLLCHSQQNTRQRKLLERVGEAFRQQGHAVINLPIEQVASR*
Ga0126379_116007662	3300010366	Tropical Forest Soil	MMRYGHNRGYRYRCTNPPQAILNARLDNIAIVPASLLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR*
Ga0137364_110214132	3300012198	Vadose Zone Soil	LTNPPKALLKARLDNIAIVPASMLGLKALWQTKANTLPKGGVLLCHSQQNTRQRRILERVGETFRQQGHTVMYLPVEQGAL*
Ga0137365_102865672	3300012201	Vadose Zone Soil	MRYRYRLTNPPKALLKARLDNIAIVPASLLGVKALWQTAANTLPKGGVLLCHSQQNTRQRKLLERIGETFRQQGHTVMNLPVEQGTL*
Ga0137363_108831762	3300012202	Vadose Zone Soil	VLLKARLDNIAIVPASMLGLKALWQTTANTLPKGGVLLCHSQQNTRQRRLLERVGETFRQQGHTVMNLPVEQGTLKAYTA*
Ga0137376_107365361	3300012208	Vadose Zone Soil	RQYRFTAPPKALLKARLDNIAIVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQRRLLERIGETFRQQGHSVMNLPVEQVAYG*
Ga0137379_106997212	3300012209	Vadose Zone Soil	MRYRYRLTNPPKALLKARLDNIAIVPASLLGVKALWQTAANTLPKGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPVEQVAYR*
Ga0150985_1042352712	3300012212	Avena Fatua Rhizosphere	RGYRYRLTNPPKALLKARMDNIAIVPASMLPLKSLWQMAANTLPQGGVLLCHSQRNPRQRKLLERVGETLKQHGHAVLNLPVEQGAL*
Ga0150985_1068543881	3300012212	Avena Fatua Rhizosphere	MRYRYTRSYRYRLTNPPKALLKARLDNIAIVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVGETFRQHGHVVMHLSMEEVYTKSRNC*
Ga0150985_1076353412	3300012212	Avena Fatua Rhizosphere	MRYRLTNPPKALLKTRLDNIAIVPASLLGLKALWQTAANSLPKGGVLLCHSQQNTRQRKLLARVGETFRQHGHAVMNLPVEQAANR*
Ga0137371_108468761	3300012356	Vadose Zone Soil	LTNPPKALRKARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVEESLKQHGHAVMNLPVELVAHS*
Ga0137360_100174423	3300012361	Vadose Zone Soil	MRYRINRSYRYRLTNPPKVLLKARLDNIAIVPASMLGLKALWQTTANTLPKGGVLLCHSQQNTRQRRLLERVGETFRQQGHTVMNLPVEQGTLKAYTT*
Ga0137361_100267423	3300012362	Vadose Zone Soil	MRYRINRSYRYRLTNPPKVLLKARLDNIAIVPASMLGLKALWQTTANTLPKGGVLLCHSQQNTRQRRLLERVGETFRQQGHTVMNLPVEQGTLKAYTA*
Ga0150984_1061556112	3300012469	Avena Fatua Rhizosphere	MRYRYRLTNPPQALLKTRLDNIAIVPASLLGLKALWQTAANSLPKGGVLLCHSQQNTRQRKLLARVGETFRHGHAVMNLPVEQAANR*
Ga0126369_124551021	3300012971	Tropical Forest Soil	MMRYRHNREYRYRCTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMSLPVEQVAYR*
Ga0163162_125204011	3300013306	Switchgrass Rhizosphere	MRHSYNRGYRYRLTNPPKALLKARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQKKLLERVGETFRQHGHAVRSLSMGEVYTTRCATFLLRS*
Ga0182001_103330442	3300014488	Soil	MMRYRYNRGYRYRLTNPPKAILKARMDNIAIVPASLLGVKALWQTAANTLPQGGVLLCHSQQNTRQRRILERVGETFRQ
Ga0132258_117508251	3300015371	Arabidopsis Rhizosphere	MMRNRYNRGYRLTNPPKALLKARMDNIAIVPASLLGVKALWQMAANTLPQGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPIKQVAY*
Ga0132257_1026269901	3300015373	Arabidopsis Rhizosphere	EVPKGCGMCDRRLKNSRFYGYHLTRPPKALLKAKLDNIAIVPASLLPFKTTWQRAANKLPKRGVLLCHSKKNTRQRKLLERVEEVFKRLGYAVMNLPIEQVV*
Ga0182041_114192571	3300016294	Soil	QKDHAGHKYMMRYRHNRGYRYRRFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPQGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR
Ga0182032_108206541	3300016357	Soil	NFSWLGAAQCRKYMMRYRHNREYRYRITNPPQAILNARLDNIAIVPASLLGMKALWQTAANTLPKGGVLLCHSEKNSRQRKLLERIGETFRQQGHAVMSLPVEQIAYH
Ga0182032_109550222	3300016357	Soil	LNAQLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHSHQNVRQRMLLERIGETFRQQGHAVMNLPIEQVAY
Ga0182032_116037811	3300016357	Soil	FTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR
Ga0182034_109529261	3300016371	Soil	LDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR
Ga0182040_103183012	3300016387	Soil	LNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHSQQNVRQRMLLERIGETFRQQGHAVMNLPIEQVAY
Ga0066662_115447262	3300018468	Grasslands Soil	MRYRYNRSYRYRLTNPPKALLKARMDNIAIVPASMLGLNALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVEKSLKQHGHAVMNLPVEQVVYWGY
Ga0126371_118693871	3300021560	Tropical Forest Soil	MMKYRHHRGDRYRLTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYT
Ga0207684_114411642	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRDRDKKPYRYRLTNPPKALLKARMDNIAIVPASMLGLKALWQTAANTLPKGGVLLCHSQQNTRQRKLLERVGETFRQQGHAVMNLPVEQVAYR
Ga0209814_100047173	3300027873	Populus Rhizosphere	MMRYRYHRGNRYRFTNPPKAILNARLDNIAIVPASMLPFKTTWQKTANKLPKRGVLLCHSRKNTRQKKLLEQVEEVFKRLGYAVMNLPIEQVV
Ga0209814_100176532	3300027873	Populus Rhizosphere	MRYRYNRGYRYRLTNPPKALLKARLDNIAIVPASLLGVKALWQTAANNLPKGGVLLCHTQQNTRQRKLLERVSETFRQHGHAVMNLPVEHVAY
Ga0209814_100548672	3300027873	Populus Rhizosphere	MDNIAIVPASMLGLKALWQTAANTLPKGGVLLCHSQQNTRQRKLVERIGETFKQQGHVVRSLSMREL
Ga0209481_100198612	3300027880	Populus Rhizosphere	MRYRYNRSFRYRLTNPPRALLNAQMDNIAIVPASMLGLKALWQTAANTLPKGGVLLCHSQQNTRQRKLVERIGETFKQQGHVVRSLSMREL
Ga0209481_100719932	3300027880	Populus Rhizosphere	LTNPPKALLKARLDNIAIVPASLLGVKALWQTAANNLPKGGVLLCHTQQNTRQRKLLERVSETFRQHGHAVMNLPVEHVAY
Ga0209382_102193592	3300027909	Populus Rhizosphere	MRYRYRLTNPPKAILKARLDNIAIVPASMLGLKALWQTTANTLPLGGVLLCHSPKNTRQRKLLERVGETFRQHGHAVMQLPVEQGGTS
Ga0209382_103678872	3300027909	Populus Rhizosphere	VILNAQLDNIAIVPASLLGMKALWQTAANTLPKGGVLLCHTQQNIRQRKLLERIGETFRQQGHTVMNLPIEQVAYR
Ga0209382_107146722	3300027909	Populus Rhizosphere	MRYRYSNSYRYRLTNPPQALLNARMDNIAIVPASMLPLMETLKEKVNTLPKGGVLLCHSQQNTRQRRILERVGETFRQQGHAVMNLPVEQVAYR
Ga0209382_108296732	3300027909	Populus Rhizosphere	RNNRGYRYRLTNPPKAILKARLDNIAIVPASMLGLKALWQKAANTLPQGGVLLCHSQQNTRQRKLLERVGETFRQHGHAVMNLPVEQGV
Ga0209382_110009452	3300027909	Populus Rhizosphere	MSYTVNKPYRYRLTHPPQALRKARLDNIAIVPASILGLKALWQTAANTLPQGGVLLCHSQQNTRQKKLLERIGETFRQHGHAVMNLPVEQGVYR
Ga0209382_110492721	3300027909	Populus Rhizosphere	MMRYRHNRGYRYRLTNPPQALLKARMDNIAIVPASLLGVKTLWQTTANTLPQGGVLLCHSQQNMRQRRLLERVGETFRQQGHAVMNLSIEQVAYR
Ga0209382_113710122	3300027909	Populus Rhizosphere	MRYRYNRGYRYRLTNPPKALLKARMDNIAIVPASLLGVKTLWQTTANTLPQGGVLLCHSEQNTRQRRLLERVGETFRQQGHAVMNLSIEQVAYH
Ga0247828_111356532	3300028587	Soil	THRLTNPPKALLKARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQKKLLERVGETFRQHGHAVRSMSTGEVYTRMV
Ga0310915_106413442	3300031573	Soil	MRYRHNREYRYRFTNPPKAILNAQLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR
Ga0306917_100597311	3300031719	Soil	MMRYRHNREYRYQFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR
Ga0306918_109157761	3300031744	Soil	RGYRYRRFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR
Ga0307410_110553821	3300031852	Rhizosphere	MIPFRHNRGYRYRLTNPPKALRKARLDNIAIVPASLLPFKTTWQKAANTLPKRGVLLCHSRKNTRQQKLLERVEEVFKRLGYAVMNLPIEQVI
Ga0306919_108059991	3300031879	Soil	MMRYRHNREYRYRFTNPPKAILNAQLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHSQQNVRQRMLLERIGETFRQQGHAVMNLPIE
Ga0306921_105290992	3300031912	Soil	MRYRHNRGYRYRRFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR
Ga0310916_116253061	3300031942	Soil	WETERQKDHAGHKYMMRYRHNREYRYRITNPPQAILNARLDNIAIVPASLLGMKALWQTAANTLPKGGVLLCHSEKNSRQRKLLERIGETFRQQGHAVMSLPVEQIAYH
Ga0310910_111068511	3300031946	Soil	MMKYRHNRGYRYRITNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR
Ga0310909_115879381	3300031947	Soil	LTNPPKAILNARLDNIAIVPASLLGMKALWQTAANTLPEGGVLLCHTQQNKRQRRLLEQIGETFRQQGHAVMNLPVEQIA
Ga0307409_1022758461	3300031995	Rhizosphere	IAMVPASMLPLKSLWQMAANTLPQGGVLLCHSQRNPRQRKLLERVGETFRAQGHAVLNLPVEQGRV
Ga0307409_1029600492	3300031995	Rhizosphere	RFNRGYRYRLTNPPKALLKARMDNIAIVPASMLGLKALWKTAANTLPQGGVLLCHSRQNTRQKKLLERVEESLKQHGHAVMNLPVEQGV
Ga0307416_1002323901	3300032002	Rhizosphere	MRRYRHNKGYRYRLTNPPKALRKARLDNIAIVPASLLPFKTTWQKAANTLPKRGVLLCHSRKNTRQQKLLERVEEVFKRLGYAVMNLPIEQVI
Ga0307416_1011290902	3300032002	Rhizosphere	MRYVLTNPPKAILNARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQHNTRQRKLLERVGDTFREQGHAVMNLPIEQVV
Ga0307416_1024949281	3300032002	Rhizosphere	YRYRLTNPPKAILKARLDNIAIVPASMLGLKALWQTAANTLPQGGVLLCHSQQNTRQRKLLERVEESLKQHGHAVMNLPVEQIASR
Ga0307414_120977362	3300032004	Rhizosphere	MRYRYKASDRYRLTNPPQALLNARLDNIAIVPASLLGLKALWQTAANTLPKGGVLLCHTQQNPRQRKILERVGETFRQHGHAVMNLPVEQVASR
Ga0310906_114659471	3300032013	Soil	MMRNRYNRGYRLTNPPKALLKARMDNIAIVPASLLGVKALWQMAANTLPQGGVLLCHSQQNTRQKKLLERIGETFRQH
Ga0310890_103396641	3300032075	Soil	MMRNRYNRGYRLTNPPKALLKARMDNIAIVPASLLGVKALWQMAANTLPQGGVLLCHSQQNTRQRKLLERIGETFRQQGHAVMNLPVKQVAY
Ga0306924_107945772	3300032076	Soil	MMRYRHNREYRYRFTNPPKAILNAQLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHSQQNVRQRMLLERIGETFRQQGHAVMNLPIEQVAY
Ga0306924_111390502	3300032076	Soil	MMRYRHNRGYRYRRFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVAYR
Ga0268251_102688641	3300032159	Agave	MMRYRHHRGYRYRLTNPPKAILNARLDNIAIVPASMLGFKALWQTAANTLPQGGVLLCHSQQNTRQRKILERVEESLKQHGHAVMNLPVEQVVYWGY
Ga0310914_113900611	3300033289	Soil	MMRYRHNRGYRYRRFTNPPQAILNARLDNIAIVPASMLGMKALWQTAANTLPKGGVLLCHTQQNTRQRRLLERIGETFRQQGHAVMNLPIEQVASR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F048409

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences