Metagenome / Metatranscriptome Family F048394

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048394
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	50 residues
Representative Sequence	MNGPLLISLLPPEQLGEAAKAPPDQVSYVVAILLLAGILLSLWMRPPGR
Number of Associated Samples	102
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.70 %
% of genes near scaffold ends (potentially truncated)	41.22 %
% of genes from short scaffolds (< 2000 bps)	72.30 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.351 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (22.973 % of family members)
Environment Ontology (ENVO)	Unclassified (54.730 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (36.486 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.86% β-sheet: 0.00% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF01329	Pterin_4a	20.27
PF01965	DJ-1_PfpI	16.89
PF00881	Nitroreductase	4.73
PF04126	Cyclophil_like	4.05
PF03150	CCP_MauG	2.70
PF01810	LysE	2.70
PF00188	CAP	2.03
PF00092	VWA	2.03
PF07681	DoxX	2.03
PF10116	Host_attach	2.03
PF00210	Ferritin	2.03
PF13649	Methyltransf_25	1.35
PF08543	Phos_pyr_kin	1.35
PF02515	CoA_transf_3	1.35
PF13146	TRL	1.35
PF07237	DUF1428	1.35
PF00107	ADH_zinc_N	1.35
PF00072	Response_reg	1.35
PF13534	Fer4_17	0.68
PF03358	FMN_red	0.68
PF13365	Trypsin_2	0.68
PF13188	PAS_8	0.68
PF04366	Ysc84	0.68
PF02550	AcetylCoA_hydro	0.68
PF01988	VIT1	0.68
PF00753	Lactamase_B	0.68
PF02518	HATPase_c	0.68
PF13520	AA_permease_2	0.68
PF09723	Zn-ribbon_8	0.68
PF01053	Cys_Met_Meta_PP	0.68
PF01261	AP_endonuc_2	0.68
PF11794	HpaB_N	0.68
PF13460	NAD_binding_10	0.68
PF03241	HpaB	0.68
PF06348	DUF1059	0.68
PF00011	HSP20	0.68
PF02900	LigB	0.68
PF06934	CTI	0.68
PF04228	Zn_peptidase	0.68
PF00775	Dioxygenase_C	0.68
PF11746	DUF3303	0.68
PF00106	adh_short	0.68
PF01925	TauE	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	20.27
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	2.70
COG4270	Uncharacterized membrane protein	Function unknown [S]	2.03
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	2.03
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	2.03
COG2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	Cell wall/membrane/envelope biogenesis [M]	1.35
COG2240	Pyridoxal/pyridoxine/pyridoxamine kinase	Coenzyme transport and metabolism [H]	1.35
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.35
COG0524	Sugar or nucleoside kinase, ribokinase family	Carbohydrate transport and metabolism [G]	1.35
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	1.35
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	1.35
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.68
COG2368	Aromatic ring hydroxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.68
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.68
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.68
COG2321	Predicted metalloprotease	General function prediction only [R]	0.68
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.68
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.68
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.68
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.68
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.68
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.68
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.68
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.68
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.68
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.68
COG0427	Propionyl CoA:succinate CoA transferase	Energy production and conversion [C]	0.68
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.68
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.35 %
Unclassified	root	N/A	23.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.35 %
Unclassified	root	N/A	23.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.35 %
Unclassified	root	N/A	23.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.92 %
Unclassified	root	N/A	23.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.03 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	15.54 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.03 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15.54 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.03 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.68 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.65 %
Chloroflexi bacterium ADurb.Bin180	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin180	2.03 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	2.03 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.35 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	0.68 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.68 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.65 %
Chloroflexi bacterium ADurb.Bin180	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin180	2.03 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.35 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.35 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.68 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	0.68 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.65 %
Chloroflexi bacterium ADurb.Bin180	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin180	2.03 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.35 %
Desulfobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacterium	0.68 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.68 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.68 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	0.68 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.65 %
Chloroflexi bacterium ADurb.Bin180	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin180	2.03 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.35 %
unclassified Desulfobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacterium → unclassified Desulfobacterium	0.68 %
Desulfobacteraceae bacterium 4484_190.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium 4484_190.3	0.68 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.68 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	0.68 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.65 %
Chloroflexi bacterium ADurb.Bin180	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin180	2.03 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.35 %
Desulfobacterium sp. 4572_20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacterium → unclassified Desulfobacterium → Desulfobacterium sp. 4572_20	0.68 %
Desulfobacteraceae bacterium 4484_190.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium 4484_190.3	0.68 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.68 %
Verrucomicrobia bacterium ADurb.Bin122	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	0.68 %
Zetaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003995\|Ga0055438_10004812	All Organisms → cellular organisms → Bacteria → Proteobacteria	2475	Open in IMG/M
3300004020\|Ga0055440_10069257	Not Available	802	Open in IMG/M
3300004020\|Ga0055440_10122807	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300004020\|Ga0055440_10133213	Not Available	614	Open in IMG/M
3300004024\|Ga0055436_10306497	Not Available	514	Open in IMG/M
3300004048\|Ga0055494_10014266	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300004049\|Ga0055493_10084862	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300004062\|Ga0055500_10112627	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300004778\|Ga0062383_10693421	Not Available	520	Open in IMG/M
3300005045\|Ga0071328_100469	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300005204\|Ga0068997_10079472	Not Available	680	Open in IMG/M
3300005213\|Ga0068998_10001595	All Organisms → cellular organisms → Bacteria → Proteobacteria	2343	Open in IMG/M
3300005218\|Ga0068996_10028042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	970	Open in IMG/M
3300005218\|Ga0068996_10202098	Not Available	515	Open in IMG/M
3300005833\|Ga0074472_10632748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	11408	Open in IMG/M
3300006224\|Ga0079037_100014458	All Organisms → cellular organisms → Bacteria → Proteobacteria	5322	Open in IMG/M
3300006224\|Ga0079037_100069678	All Organisms → cellular organisms → Bacteria	2840	Open in IMG/M
3300006224\|Ga0079037_100603416	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300006224\|Ga0079037_100627335	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacterium → unclassified Desulfobacterium → Desulfobacterium sp. 4572_20	1044	Open in IMG/M
3300006224\|Ga0079037_100819561	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300006224\|Ga0079037_101023981	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300006224\|Ga0079037_101024121	All Organisms → cellular organisms → Bacteria → Proteobacteria	818	Open in IMG/M
3300006930\|Ga0079303_10400373	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009091\|Ga0102851_10426883	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300009091\|Ga0102851_11028151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	898	Open in IMG/M
3300009091\|Ga0102851_13490654	Not Available	505	Open in IMG/M
3300009166\|Ga0105100_10062685	All Organisms → cellular organisms → Bacteria	2160	Open in IMG/M
3300009166\|Ga0105100_10222274	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300009167\|Ga0113563_10152521	All Organisms → cellular organisms → Bacteria → Proteobacteria	2227	Open in IMG/M
3300009167\|Ga0113563_10187732	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300009167\|Ga0113563_10529909	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1291	Open in IMG/M
3300009167\|Ga0113563_10574130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1244	Open in IMG/M
3300009167\|Ga0113563_11077907	All Organisms → cellular organisms → Bacteria → Proteobacteria	929	Open in IMG/M
3300009171\|Ga0105101_10012912	All Organisms → cellular organisms → Bacteria → Proteobacteria	3977	Open in IMG/M
3300009179\|Ga0115028_11113913	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	643	Open in IMG/M
3300011402\|Ga0137356_1029821	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300011413\|Ga0137333_1029455	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300011413\|Ga0137333_1060881	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300011414\|Ga0137442_1128007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300011419\|Ga0137446_1025212	All Organisms → cellular organisms → Bacteria → Proteobacteria	1238	Open in IMG/M
3300011427\|Ga0137448_1152515	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300011428\|Ga0137456_1049490	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300011431\|Ga0137438_1184388	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300011433\|Ga0137443_1011282	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300011433\|Ga0137443_1113360	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300011436\|Ga0137458_1130746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin180	740	Open in IMG/M
3300011436\|Ga0137458_1182025	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300011437\|Ga0137429_1069739	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300012146\|Ga0137322_1062454	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300012146\|Ga0137322_1075792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Zetaproteobacteria	522	Open in IMG/M
3300012157\|Ga0137353_1035236	Not Available	882	Open in IMG/M
3300012160\|Ga0137349_1116206	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	500	Open in IMG/M
3300012164\|Ga0137352_1012756	All Organisms → cellular organisms → Bacteria → Proteobacteria	1524	Open in IMG/M
3300012166\|Ga0137350_1011734	Not Available	1574	Open in IMG/M
3300012179\|Ga0137334_1122277	Not Available	588	Open in IMG/M
3300012228\|Ga0137459_1010775	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300012675\|Ga0137337_1006330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1485	Open in IMG/M
3300012675\|Ga0137337_1022567	All Organisms → cellular organisms → Bacteria → Proteobacteria	919	Open in IMG/M
3300014265\|Ga0075314_1171455	Not Available	515	Open in IMG/M
3300014271\|Ga0075326_1005877	All Organisms → cellular organisms → Bacteria → Proteobacteria	2807	Open in IMG/M
3300014305\|Ga0075349_1151806	Not Available	543	Open in IMG/M
3300014313\|Ga0075347_1021441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium 4484_190.3	1199	Open in IMG/M
3300014315\|Ga0075350_1002896	All Organisms → cellular organisms → Bacteria	2735	Open in IMG/M
3300014862\|Ga0180096_1000779	All Organisms → cellular organisms → Bacteria → Proteobacteria	1349	Open in IMG/M
3300014863\|Ga0180060_1011224	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300014864\|Ga0180068_1012723	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300014864\|Ga0180068_1092320	Not Available	508	Open in IMG/M
3300014875\|Ga0180083_1000175	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5259	Open in IMG/M
3300014875\|Ga0180083_1114822	Not Available	593	Open in IMG/M
3300014881\|Ga0180094_1018809	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300014884\|Ga0180104_1092598	Not Available	853	Open in IMG/M
3300015250\|Ga0180072_1081881	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300015253\|Ga0180081_1027729	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300015256\|Ga0180073_1014170	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1388	Open in IMG/M
3300018055\|Ga0184616_10041224	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300018084\|Ga0184629_10007338	All Organisms → cellular organisms → Bacteria	4169	Open in IMG/M
3300019208\|Ga0180110_1118245	Not Available	892	Open in IMG/M
3300019208\|Ga0180110_1133038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1126	Open in IMG/M
3300019212\|Ga0180106_1186778	Not Available	639	Open in IMG/M
3300019228\|Ga0180119_1196866	Not Available	881	Open in IMG/M
3300019229\|Ga0180116_1270928	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300019229\|Ga0180116_1354337	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300019244\|Ga0180111_1349986	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300019249\|Ga0184648_1251728	All Organisms → cellular organisms → Bacteria → Proteobacteria	1404	Open in IMG/M
3300019249\|Ga0184648_1312383	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300020064\|Ga0180107_1130697	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	584	Open in IMG/M
3300020066\|Ga0180108_1138552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin180	792	Open in IMG/M
3300020067\|Ga0180109_1318696	Not Available	523	Open in IMG/M
3300020067\|Ga0180109_1335328	All Organisms → cellular organisms → Bacteria	1832	Open in IMG/M
3300021081\|Ga0210379_10032851	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300021081\|Ga0210379_10415714	Not Available	595	Open in IMG/M
3300021090\|Ga0210377_10334432	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300022385\|Ga0210376_1027937	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	816	Open in IMG/M
3300025327\|Ga0209751_10911850	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300025560\|Ga0210108_1000006	All Organisms → cellular organisms → Bacteria → Proteobacteria	78105	Open in IMG/M
3300025567\|Ga0210076_1002570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4420	Open in IMG/M
3300025950\|Ga0210134_1011838	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300025955\|Ga0210071_1008248	Not Available	1213	Open in IMG/M
3300025979\|Ga0210078_1000641	All Organisms → cellular organisms → Bacteria	3092	Open in IMG/M
3300026048\|Ga0208915_1011965	Not Available	743	Open in IMG/M
3300027713\|Ga0209286_1086783	Not Available	1168	Open in IMG/M
3300027843\|Ga0209798_10042578	Not Available	2385	Open in IMG/M
3300027877\|Ga0209293_10001962	All Organisms → cellular organisms → Bacteria	5133	Open in IMG/M
3300027877\|Ga0209293_10021122	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300031707\|Ga0315291_10035994	All Organisms → cellular organisms → Bacteria → Proteobacteria	5727	Open in IMG/M
3300031873\|Ga0315297_10231416	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300031949\|Ga0214473_10302088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin122	1828	Open in IMG/M
3300032018\|Ga0315272_10745697	Not Available	500	Open in IMG/M
3300032163\|Ga0315281_10166305	All Organisms → cellular organisms → Bacteria → Proteobacteria	2485	Open in IMG/M
3300032163\|Ga0315281_10184847	All Organisms → cellular organisms → Bacteria → Proteobacteria	2335	Open in IMG/M
3300032173\|Ga0315268_10103356	All Organisms → cellular organisms → Bacteria → Proteobacteria	2687	Open in IMG/M
3300032173\|Ga0315268_10757534	Not Available	970	Open in IMG/M
3300032342\|Ga0315286_10002130	All Organisms → cellular organisms → Bacteria → Proteobacteria	18358	Open in IMG/M
3300032516\|Ga0315273_10299684	All Organisms → cellular organisms → Bacteria	2182	Open in IMG/M
3300033406\|Ga0316604_10015810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4023	Open in IMG/M
3300033406\|Ga0316604_10017763	All Organisms → cellular organisms → Bacteria → Proteobacteria	3755	Open in IMG/M
3300033406\|Ga0316604_10028311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2892	Open in IMG/M
3300033406\|Ga0316604_10037793	All Organisms → cellular organisms → Bacteria → Proteobacteria	2481	Open in IMG/M
3300033406\|Ga0316604_10059043	All Organisms → cellular organisms → Bacteria → Proteobacteria	1975	Open in IMG/M
3300033406\|Ga0316604_10062410	Not Available	1922	Open in IMG/M
3300033408\|Ga0316605_10167970	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300033408\|Ga0316605_12298434	Not Available	524	Open in IMG/M
3300033413\|Ga0316603_10088359	All Organisms → cellular organisms → Bacteria	2409	Open in IMG/M
3300033413\|Ga0316603_10097569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin180	2311	Open in IMG/M
3300033413\|Ga0316603_10134224	All Organisms → cellular organisms → Bacteria	2021	Open in IMG/M
3300033413\|Ga0316603_10261102	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300033413\|Ga0316603_11761688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	586	Open in IMG/M
3300033413\|Ga0316603_11889447	Not Available	565	Open in IMG/M
3300033414\|Ga0316619_10225172	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1372	Open in IMG/M
3300033416\|Ga0316622_100032939	All Organisms → cellular organisms → Bacteria	4676	Open in IMG/M
3300033416\|Ga0316622_100398231	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300033419\|Ga0316601_100143272	All Organisms → cellular organisms → Bacteria → Proteobacteria	2017	Open in IMG/M
3300033419\|Ga0316601_100380039	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300033419\|Ga0316601_100408730	Not Available	1279	Open in IMG/M
3300033434\|Ga0316613_10038335	All Organisms → cellular organisms → Bacteria → Proteobacteria	2728	Open in IMG/M
3300033481\|Ga0316600_10192048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1327	Open in IMG/M
3300033482\|Ga0316627_102681789	Not Available	528	Open in IMG/M
3300033485\|Ga0316626_10365292	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300033488\|Ga0316621_10067687	Not Available	1874	Open in IMG/M
3300033489\|Ga0299912_11257812	Not Available	536	Open in IMG/M
3300033493\|Ga0316631_10069712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1184	Open in IMG/M
3300033521\|Ga0316616_100118832	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300033521\|Ga0316616_101024674	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300033557\|Ga0316617_101583339	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	663	Open in IMG/M
3300033814\|Ga0364930_0024073	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300034083\|Ga0373901_156344	Not Available	500	Open in IMG/M
3300034113\|Ga0364937_012628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1311	Open in IMG/M
3300034643\|Ga0370545_065768	Not Available	733	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.32%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	70.27%
Terrestrial	Environmental → Terrestrial	29.05%
Bioremediation	Engineered → Bioremediation	0.68%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	33.11%
Soil	Environmental → Terrestrial → Soil	27.03%
Sediment	Environmental → Aquatic → Sediment	25.00%
Marine	Environmental → Aquatic → Marine	12.16%
Floodplain	Environmental → Terrestrial → Floodplain	1.35%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.68%
Metal	Engineered → Bioremediation → Metal	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	25.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	15.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.49%
Wetlands	Environmental → Aquatic → Marine → Wetlands	11.49%
Lake	Environmental → Aquatic → Freshwater → Lake	6.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.35%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.68%
Loam	Environmental → Terrestrial → Soil → Loam	0.68%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.68%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	23.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	15.54%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	11.49%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	11.49%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	6.08%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.35%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.35%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.68%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.68%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	22.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	19.59%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	11.49%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	10.81%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	10.14%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	6.08%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.05%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.70%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.03%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.35%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.35%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.68%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.68%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.68%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004048	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012146	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012675	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT333_2	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014305	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D1	Environmental	Open in IMG/M
3300014313	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014862	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293_16_1Da	Environmental	Open in IMG/M
3300014863	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT25_16_10D	Environmental	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014881	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1Da	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015250	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293B_16_10D	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019208	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019212	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019244	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT293_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020064	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020066	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022385	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S771 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025950	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025955	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025979	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026048	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034083	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.2	Engineered	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055438_100048124	3300003995	Natural And Restored Wetlands	MNGPLLISLLPLGETAKAPPDQVSYVVAILLLAGVLLSLWMRPPRR*
Ga0055440_100692572	3300004020	Natural And Restored Wetlands	MNGPLLIDLLPPDQLGEAAYAARDPVSSAVAILFLAGILL
Ga0055440_101228073	3300004020	Natural And Restored Wetlands	MNGPLLISLLPLGETAKAPPDQVSYVVAILLLAGVLLSLWM
Ga0055440_101332131	3300004020	Natural And Restored Wetlands	MNGPLLISLMPPELIGEAAMAPPDQVAYVVAILLLAGTLLSHWIRPSGR*
Ga0055436_103064972	3300004024	Natural And Restored Wetlands	GPLLISLMPPELIGEAAMAPPDQVSYVVAILLLAGILLSHWMRPSGR*
Ga0055494_100142662	3300004048	Natural And Restored Wetlands	MNGPLLISLLPPEQIGEAAKVPPDHLSLVVAILFLAGILLSLWKHPPGR*
Ga0055493_100848622	3300004049	Natural And Restored Wetlands	MNGPLLISLLPPEQIGEAAKAPPDHLSLVVAILFLAGFLLSLWKHPPGR*
Ga0055500_101126271	3300004062	Natural And Restored Wetlands	PPPPDGVAPVMNGPLLISLLPLGETAKAPPDQVSYVVAILLLAGVLLSLWMRPPRR*
Ga0062383_106934211	3300004778	Wetland Sediment	MNGPLLISLLPPEPLGEAAKAPPDQVSYVVAIILLAGFFLSLWMRPPGR*
Ga0071328_1004692	3300005045	Permafrost	MNGPLLISLLPPEQLGEAAKTPPDQVTSVVIIILLAGILLSLWLRPPGRG*
Ga0068997_100794722	3300005204	Natural And Restored Wetlands	IPMYGPLLISLLPPEPIGEAARTAPDPVPCIAILLLAGFLLSLWMHPPGR*
Ga0068998_100015952	3300005213	Natural And Restored Wetlands	MNGPLLISLLPPEQIGEAAKAPPDQVTYVIAVLLLAGILLSRWLRPPKQ*
Ga0068996_100280422	3300005218	Natural And Restored Wetlands	ISLLPLGETAKAPPDQVSYVVAILLLAGVLLSLWMRPPRR*
Ga0068996_102020982	3300005218	Natural And Restored Wetlands	HPNGVAAVMNGPLLISLLPPEQLGEAAKTPRDQVPYVVAILLLTGFLLSLWMRPPGR*
Ga0074472_106327488	3300005833	Sediment (Intertidal)	MVGMNGPLLISLLPPEPLGGAAMAPPDQVSYVVAILLLAGILLSLWMRPPVR*
Ga0079037_1000144582	3300006224	Freshwater Wetlands	MNGPLLISLLPPEQLGEAAKAPPDQVSYVVAILLLAGILLSLWMRPPGR*
Ga0079037_1000696783	3300006224	Freshwater Wetlands	MNGPLLISLLPPEQIGEAAKAPPDQVAYVVAALLLAGLLLSLWMHPPGPR*
Ga0079037_1006034162	3300006224	Freshwater Wetlands	MNGPLLISLLPPEPIGEAAKAPPDQVPYVVAVLLLAGLLLSLWMRPPGPG*
Ga0079037_1006273353	3300006224	Freshwater Wetlands	MNGPLLISLLPPEQIGEAAKAPPGEVPYVVAILLLAGILLSLWMRPPGR*
Ga0079037_1008195612	3300006224	Freshwater Wetlands	MNGPLLISLLPPEQIGEATKSFPDRVPYVVVILLLAGILLSLWMRPPGR*
Ga0079037_1010239812	3300006224	Freshwater Wetlands	VHSIMNGPLLISLLPPEQLGEAAKAPPEEVSYVVAILLLAGILLSLWMRPPGR*
Ga0079037_1010241213	3300006224	Freshwater Wetlands	MNGPLLVSLLPPERLWEAAGAAPDQVSYVVAFLLLAGILLSLWTHPPER*
Ga0079303_104003731	3300006930	Deep Subsurface	NGPLLISLLPPEQLGEAAKAHPDQASTVVAILLLAGILLSLWMRPPDC*
Ga0102851_104268831	3300009091	Freshwater Wetlands	MNGPLLVSLLPPERLWEAAGAAPDQVSYVVAFLLLAGILLSLWTHPP
Ga0102851_110281512	3300009091	Freshwater Wetlands	MVAAVMNGPLLISLLPPEQIGEAAKAPPGEVPYVVAILLLAGILLSLWMRPPGR*
Ga0102851_134906541	3300009091	Freshwater Wetlands	MNGPLLISLLPPEQLWEAAKAPPEEVSYVVAILLLAGILLSLWMRPPGR*
Ga0105100_100626851	3300009166	Freshwater Sediment	MNGPLLISLLPPEQLGEAAKAPPEPVSYVIAILLLAGILLSLWLRPPGG*
Ga0105100_102222743	3300009166	Freshwater Sediment	LNEVAAVMNGPLLISLLPPERLGEAAKAPPEPVSYVIAIFLLAGILLSLWLRPPGG*
Ga0113563_101525212	3300009167	Freshwater Wetlands	MNGPLLVSLLPPERLWEAAGAAPDQVSYVVAFLLLAGILLSLWTHPPGR*
Ga0113563_101877322	3300009167	Freshwater Wetlands	MNGPLLISLLPPEQIGEVAKAPPDQVAYVVAALLLAGLLLSLWMHPPGPR*
Ga0113563_105299091	3300009167	Freshwater Wetlands	MNGPLLISLLPPEQLGEAAKAPPDQASTVVAILLLAGILLSLWMRPPGR*
Ga0113563_105741302	3300009167	Freshwater Wetlands	MNGPLLISLLPPEQLGEAAKAPPEQASTVVAILLLAGLLLSLWMRPPGR*
Ga0113563_110779073	3300009167	Freshwater Wetlands	MVASVMNGPLLISLLPPEQIGEATKSFPDRVPYVVAILLLAGILLSLRMRPPER*
Ga0105101_100129124	3300009171	Freshwater Sediment	MNGPLLISLLPPERLGEAAKAAPETVSYVIAIFLLAGILLSLWLRPPGG*
Ga0115028_111139131	3300009179	Wetland	LLPPEQLGEAVKAHPDQASTVVAILLLAGILLSIWMRPPGR*
Ga0137356_10298211	3300011402	Soil	HHGGEGQPFPLNGVVVVMIGLLLISFLFFEPLGEVAKSPQVSYAVALLLLAGILLSLLLRPPGR*
Ga0137333_10294554	3300011413	Soil	MNGPLLISLLPPDPIGEAVKSTQDQVSYVVALLLLAGILLSLLLRP
Ga0137333_10608813	3300011413	Soil	MNGPLLISLLPPERLGEIAEAPPEQVPYVVAVLLLAGILLSLWMRPPGQPGTGGGIPMK*
Ga0137442_11280072	3300011414	Soil	LISLLPPEPLGEAAKATQDQVSFVVALLLLAGILLSLLLRPPGR*
Ga0137446_10252122	3300011419	Soil	MYGPLLISLLPPEPLGEAAKATHDQVSYVVALLLLAGILLSLLLRPPGR*
Ga0137448_11525152	3300011427	Soil	MNGPLLISLLPPEPLGEAAKAAQDQGSYVVALLLLAGILLSLLLRPPGR*
Ga0137456_10494902	3300011428	Soil	MNGPLLISLLPPDPTGEAAKAPPDQVPYVIAVLLLAGILLSLWTRPPGH*
Ga0137438_11843883	3300011431	Soil	MNGPLLISLLPPEPFEGAAEAPPDQAPYVVAVLLL
Ga0137443_10112824	3300011433	Soil	MNGPLLISLLPPEPIGEAAKAPTDQVSTVVAILLLAGILLALCMRPPGR*
Ga0137443_11133602	3300011433	Soil	AAGMNGPLLISLLPPERFGEAANAPPGQVSYVVTILLLAGILLSLWMRPPGR*
Ga0137458_11307461	3300011436	Soil	MNGPLLISLLPPERLGEIAEAPPEQVPYVVAVLLLAGILLSLWMRPPSQPGTGGGIPMK*
Ga0137458_11820251	3300011436	Soil	MNGPLLISLLPPEPIGEAAKAPTDQVSTVVAILLL
Ga0137429_10697393	3300011437	Soil	MNGPLLISLLPPEQLGEAAKAHPDQASTVVAILLLAGILLSLWMRPPGL*
Ga0137322_10624542	3300012146	Soil	NGPLLISLLPPEPLGEAAKATQDQVTFVVALLLLAGILLSLLLRPPGR*
Ga0137322_10757922	3300012146	Soil	MNGPLLISLLPPEQLGEAAKAYPEQASTVVAILLLAGILLSLWMRPPGR*
Ga0137353_10352361	3300012157	Soil	PPPAIGVVTVVNGPLLISLLPPEQLGEAAKAPPDQASIVVATLLLAGILLSLWMRPPER*
Ga0137349_11162062	3300012160	Soil	MNGPLLISLLPPERLGEIAEAPPEQVPYVIAVLLLAGILLSLWMRPPSQPGTGGGIPMK*
Ga0137352_10127563	3300012164	Soil	MIGPLLISLLPPEPLGEAAKSPQDQVSYAIALLLLAGILLSLLLRPPGR*
Ga0137350_10117342	3300012166	Soil	VNGPLLISLLPPEQLGEAAKAHPDQASTVVAILLLAGILLSLWMRPPGR*
Ga0137334_11222772	3300012179	Soil	VNGPLLISLLPPEQLGEAAKAHPDQASTVVAILLLAGILLSLWMRPPGR
Ga0137459_10107754	3300012228	Soil	MNGPLLISLLPPEQLGEAAKAHPEQASTVVAILLLAGILLSLWMRPPGR*
Ga0137337_10063302	3300012675	Soil	GEGQPPPLNGVAAVMIGPLLISLLPPEPLGEAAKAPQDLVSYVVALFLLAGILFSLLLRPPRR*
Ga0137337_10225672	3300012675	Soil	GEGQPPPLNGVAAVMIGPLLISLLPPEPLGEAAKSPQDQVSYAIALLLLAGILLSLLLRPPGR*
Ga0075314_11714552	3300014265	Natural And Restored Wetlands	MSGRIRTGGCGTVILMNGPLLISLLPPEPIGEAVKAPPDQVTYVVAVLLLAGLLLSLWMRPPSPPQ
Ga0075326_10058775	3300014271	Natural And Restored Wetlands	MNGPLLISLLPPERLEEAAKAPPDQASTVVAILLLAGILLSLWMPPPGR*
Ga0075349_11518061	3300014305	Natural And Restored Wetlands	NGPLLISLLPPEQIGEAAKAPPDHLSLVVAILFLAGFLLSLWKHPPGR*
Ga0075347_10214412	3300014313	Natural And Restored Wetlands	MNGPLLISLLPPEQIGEAAKVPPDHLSLVVAILFLAGFLLSLWKHPPGR*
Ga0075350_10028964	3300014315	Natural And Restored Wetlands	MNGPLLISLLPPEQIGEAAKAPPDHLSLVVAILFLAG
Ga0180096_10007793	3300014862	Soil	MNGPLLISLLPPEPLGEAAKATHDQVSYVVALLLLAGILLSLLLRPPGR*
Ga0180060_10112241	3300014863	Soil	MNGPLLISLLPPDPIGEAAKAPPDQVSYVVALLLLAGILLSLWLRPPVR*
Ga0180068_10127233	3300014864	Soil	LNGVAAVMNGPLLISLLPPEPLGEAAKAAQDQVSYVVALLLLAGILLSLLLRPPGR*
Ga0180068_10923201	3300014864	Soil	VNGPLLISLLPPEQLGEAAKAHPDQASTVIAILLLAGFLL
Ga0180083_10001751	3300014875	Soil	MNGPLLISLLPPEQLGEAAKAPPEQASTVVAILLLAGFLLSLWMRPPGR*
Ga0180083_11148221	3300014875	Soil	AAVVNGPLLISLLPPEQLGEAAKAHPDQASTVVAILLLAGILLSLWMRPPGR*
Ga0180094_10188093	3300014881	Soil	MNGPLLISLLPPEQLGEAAKAHPEQATTVVAILLLAGILLSLWMRPPGR*
Ga0180104_10925982	3300014884	Soil	MIGPLLISLLPPEPLGEAAKAPQDLVSYVVALFLLAGILFSLLLRPPRR*
Ga0180072_10818812	3300015250	Soil	MNGPLLISLLPPEPLGEAAKATQDQVSFVVALLLLAGILLSLLLRPPGR*
Ga0180081_10277292	3300015253	Soil	MNGPLLISLLPPDSTGEAAKAPPDQVSYVIAILLLAGILLSLWTRPPGH*
Ga0180073_10141702	3300015256	Soil	MNGPLLISLLPPEPLGEAAKAAQDQVSCVVALLLLAGLLLSLLLRPPGR*
Ga0184616_100412242	3300018055	Groundwater Sediment	MNGPLLISLLPPEPLGEAAMAPPDQVSYVVAIFLLAGILLSLWMRPPVR
Ga0184629_100073386	3300018084	Groundwater Sediment	MNGPLLISLLPPEPLGEAAKTPPDQVSYVVAILLLAGILLSLWMGPPGR
Ga0180110_11182452	3300019208	Groundwater Sediment	MNGPLLISLLPPERLGELAEAPPEQVPYVIAVLLLAGLLLSLWIRPPSQPGTGGGIPMK
Ga0180110_11330382	3300019208	Groundwater Sediment	AVMNGPLLISLLPPERLGEIAEAPPEQVPYVVAVLLLAGILLSLWMRPPGQPGTGGGIPM
Ga0180106_11867781	3300019212	Groundwater Sediment	MNGPLLISLLPPEPLGETAKATQDQVSFVVALLLLAGILLSLLLRPPGR
Ga0180119_11968662	3300019228	Groundwater Sediment	MNGPLLISLLPPERLGEIAEAPPEQVPYVVAVLLLAGILLSLWMRPPGQPGTGGGIPMK
Ga0180116_12709282	3300019229	Groundwater Sediment	MIGPLLISLLPPEPLGEAAKSPQDQVSYAIALLLLAGILLSLLLRPPGR
Ga0180116_13543372	3300019229	Groundwater Sediment	MNGPLLISLLPPERLGEIAEAPPEQVPYVIAVLLLAGILLSLWLRPPSQPGTGGGIPMK
Ga0180111_13499861	3300019244	Groundwater Sediment	MNGPLLISLLPPEPLGEAAKAPQDQASYVVALLLLAGIL
Ga0184648_12517282	3300019249	Groundwater Sediment	MNGPLLISLLPPERFGEAANAPPGQVSYVVTILLLAGILLSLWMRPPGR
Ga0184648_13123832	3300019249	Groundwater Sediment	MNGPLLISLLPPERLGEIAEAPPEQVPYVIAVLLLAGILLSLWMRPPSQPGTGGGIPMK
Ga0180107_11306971	3300020064	Groundwater Sediment	MNGPLLISLLPPERLGEIAEAPPEQVPYVIAVLLLAGLLLSLWMRPPSQPGTGGGIPMK
Ga0180108_11385521	3300020066	Groundwater Sediment	MNGPLLISLLPPERLGEIAEAPPEQVPYVIAILLLAGILLSLWMRPPSQPGTGGGIPMK
Ga0180109_13186962	3300020067	Groundwater Sediment	MNGPLLISLLPPEQLGEAAKAPPEQASTVVAILLLAG
Ga0180109_13353283	3300020067	Groundwater Sediment	MNGPLLISLLPPEPLGEAAKTPPDQVSYVIAILLLAGILLSLWMGPPGR
Ga0210379_100328513	3300021081	Groundwater Sediment	MIGPLLISLLPPEPLGEAAKAPQDQVSYVVALFLLAGILFSLLLHPPRRNK
Ga0210379_104157142	3300021081	Groundwater Sediment	MNGPLLISLLPPEQIGEAAKAPPDQVTYVVAVLLLAGILL
Ga0210377_103344321	3300021090	Groundwater Sediment	SGVAAGMNGPLLISLLPPERFGEAANAPPGQVSYVVTILLLAGILLSLWMRPPGR
Ga0210376_10279372	3300022385	Estuarine	MNGPLLISLLPPEQIGEAAKVPPDHLSLVVAILFLAGILLSLWKHPPGR
Ga0209751_109118502	3300025327	Soil	GGCATMNPMNGPLLISLLPPERIGEAAKAPSDQVMFVVAILLLAGILLSRWLHPPRR
Ga0210108_100000668	3300025560	Natural And Restored Wetlands	MNGPLLISLLPLGETAKAPPDQVSYVVAILLLAGVLLSLWMRPPRR
Ga0210076_10025702	3300025567	Natural And Restored Wetlands	MNGPLLVSLLPPDLIGEAAKAPPDQFPFVVATLLLAGILLSLWMHPPGR
Ga0210134_10118382	3300025950	Natural And Restored Wetlands	MNGPLLISLLPPEQIGEAAKAPPDHLSLVVAILFLAGFLLSLWKHPPGR
Ga0210071_10082482	3300025955	Natural And Restored Wetlands	MNGPLLISLLPPEQLGEAAKATPEQVSYVVAILLLAGILLSLWMRPP
Ga0210078_10006412	3300025979	Natural And Restored Wetlands	MNGPLLISLLPPEQIGEAAKAPPDQVTYVIAVLLLAGILLSRWLRPPKQ
Ga0208915_10119652	3300026048	Natural And Restored Wetlands	MNDPLLISLLPPEQIGEAAKAPPDQVTYVIAVLLLAGILLSRWL
Ga0209286_10867833	3300027713	Freshwater Sediment	MNGPLLISLLPPEQLGEAAKAPPEPVSYVIAILLLA
Ga0209798_100425782	3300027843	Wetland Sediment	MNGPLLISLLPPEPAGEAAKAPPDQVSCVIAILLLAGILLSLWTRPPGH
Ga0209293_100019624	3300027877	Wetland	MRGTARSVIPMYGPLLISLLPPEPIGEAARTAPDPVPCIAILLLAGFLLSLWMHPPGR
Ga0209293_100211222	3300027877	Wetland	MNGPLLISLLPPEQIGEAAKAPPDQVAYVVAALLLAGLLLSLWMHPPGPR
Ga0315291_100359944	3300031707	Sediment	MNGPLLISLLPPEQLGEAAKTPPDQVPYVVAIILLAGFLLSFWMRPPGR
Ga0315297_102314161	3300031873	Sediment	ISLLPPEQLGEAAKTPPDQVPYVVAIILLAGFLLSLWMRPPGR
Ga0214473_103020881	3300031949	Soil	KGVAAVMNGPLLISLLPPEPLGEAAKATQDQVSYVVALLLLAGILLSLLLRPPGR
Ga0315272_107456971	3300032018	Sediment	NGVAAVMNGPLLISLLPPEQLGEAAKTPPDQVPYVVAIILLAGFLLSFWMRPPGR
Ga0315281_101663051	3300032163	Sediment	MYGPLLISLLPPEPIGEAARTAPDPVPCIAILLLAGFLLSLWMHPPGR
Ga0315281_101848473	3300032163	Sediment	MNGPLLISLLPPEPLGEAAKTPPDQASYVVAILLLAGFLLSLWMRPPGR
Ga0315268_101033564	3300032173	Sediment	MNGPLLISLLPPEQLGEAAKLPPEQVSYVIAILLLAGILLSLWMRPPRD
Ga0315268_107575343	3300032173	Sediment	MRGTARSVIPMYGPLLISLLPPEPIGEAARTAHDPVPCIAILLLAGFLLSLWMHPPG
Ga0315286_1000213015	3300032342	Sediment	VIPMYGPLLISLLPPEPIGEAARTAPDPVPFIAILLLAGFLLSLWMHPPVR
Ga0315273_102996841	3300032516	Sediment	VMNGPLLISLLPPEQLGEAAKTPPDQVPYVVAIILLAGFLLSLWMRPPGR
Ga0316604_100158105	3300033406	Soil	MNGPLLISLLPPEQIGEATKSFPDRVPYVVVILLLAGILLSLWMRPPGR
Ga0316604_100177632	3300033406	Soil	MNGPLLISLLPPEQLGEAAKAPPDQVSYVVAILLLAGILLSLWMRPPGR
Ga0316604_100283112	3300033406	Soil	MNGPLLVSLLPPERLWEAAGAAPDQVSYVVAFLLLAGILLSLWTHPPER
Ga0316604_100377931	3300033406	Soil	HHGGEGQPPPLRRVATVMNGPLLISLLPPEQIGEAAKSFPDQGSYVVAILLLAGILLSLWMRPPGR
Ga0316604_100590433	3300033406	Soil	MNGPLLISLLPPEQIGEATKSFPDRVPYVVAILLLAGILLSLRMRPPER
Ga0316604_100624101	3300033406	Soil	MNGPLLISLLFPERIGEASKSHPNLTSYVVALLLLAGILLSLWMRPPDC
Ga0316605_101679702	3300033408	Soil	MNGPLLISLLPPEQLGEAAKAPPEQASTVVAILLLAGLLLSLWMRPPGR
Ga0316605_122984341	3300033408	Soil	VNGPLLISLLPPEQLGEAAKAHPDQASTVVAILLLAGILLS
Ga0316603_100883593	3300033413	Soil	MNGPLLISLLPPERLGEAAKVPPDQVSYVVAILLLGGILLSLWMRPPRR
Ga0316603_100975692	3300033413	Soil	MNGPLLISLLPPEQIGEAAKAPPGEVPYVVAILLLAGILLSLWMRPPGR
Ga0316603_101342243	3300033413	Soil	MVASVMNGPLLISLLPPEQIGEATKSFPDRVPYVVAILLLAGILLSLRMRPPER
Ga0316603_102611021	3300033413	Soil	MNGPLLISLLPPEQLGEAAKAPPEQASTVVAILLLAGILLSLWVRPPGR
Ga0316603_117616882	3300033413	Soil	PLRRVATVMNGPLLISLLPPEQIGEATKSFPDRVPYVVVILLLAGILLSLWMRPPGR
Ga0316603_118894471	3300033413	Soil	QPPPAIGVATVMNGPLLISLLPPEQLGEAAKAPPEQASTVVAILLLAGLLLSLWMRPPGR
Ga0316619_102251721	3300033414	Soil	HHGGEGQPPPLRRVATVMNGPLLISLLPPEQIGEATKSFPDRVPYVVVILLLAGILLSLWMRPPGR
Ga0316622_1000329393	3300033416	Soil	MRGAACSVIPMYGPLLISLLPPEPIGEAARTAPDPVPCISILLLAGFLLSLWMHPPGR
Ga0316622_1003982312	3300033416	Soil	MNGPLLISLLPPEQLWEAAKAPPEEVSYVVAILLLAGILLSLWMRPPGR
Ga0316601_1001432722	3300033419	Soil	MNGPLLVSLLPPERLWEAAGAAPDQVSYVVAFLLLAGILLSLWTHPPGR
Ga0316601_1003800393	3300033419	Soil	HGETVVMNGPLLISLLPPERLGEAAKVPPDQVSYVVAILLLGGILLSLWMRPPRR
Ga0316601_1004087302	3300033419	Soil	MNGPLLISLLPPEQLGEAAKAPPEQASTVVAILLLAGILLSLWIRPPGR
Ga0316613_100383352	3300033434	Soil	VNGPLLISLLPPEQLGEAVKAHPDQASTVVAILLLAGILLSLWMRPPGR
Ga0316600_101920481	3300033481	Soil	PLRRVATVMNGPLLISLLPPEQIGEATKLFPDRVPYVVVILLLAGILLSLWMRPPGR
Ga0316627_1026817891	3300033482	Soil	MNGPLLISLLPPEQLGEAAKAPPEQASTVVAILLLAGILLSL
Ga0316626_103652921	3300033485	Soil	MRGAACSVIPMYGPLLISLLPPEPIGEAARTAPDPVPCISILLLAGFLLS
Ga0316621_100676871	3300033488	Soil	MNGPLLISLLFPERIGEASKSHPNLTSYVVALLLLAGILLSLWM
Ga0299912_112578122	3300033489	Soil	MNGPLLTSLLPPEQLGEAAKVPPEQVSYVIAILLLAGILLSLWMRPPGG
Ga0316631_100697121	3300033493	Soil	LRRVATVMNGPLLISLLPPEQIGEAAKSFPDQGSYVVAILLLAGILLSLWMRPPGR
Ga0316616_1001188325	3300033521	Soil	MNGPLLISLLFPERIGEASKSHPNLTSYVVALLLLAGILLSLWMRP
Ga0316616_1010246743	3300033521	Soil	MNGPLLVSLLPPERLWKAAGAAPDQVSYVVAFLLLAGIL
Ga0316617_1015833391	3300033557	Soil	HGGEGQPPPLRRVATVMNGPLLISLLPPEQIGEATKSFPDRVPYVVVILLLAGILLSLWMRPPGR
Ga0364930_0024073_1217_1363	3300033814	Sediment	MNGPLLISLLPPEPLGEVAKAPTDPVSSAIAILLLAGILLSLWMRPPG
Ga0373901_156344_394_498	3300034083	Sediment Slurry	MNGPLLISLLPPEPFGEAAKASPDQLSYVVAILLL
Ga0364937_012628_228_383	3300034113	Sediment	MNGPLLISLLPPEPLGEAAKAPQDQVSYVVALFLLAGILFSLLLHPPRRKK
Ga0370545_065768_3_134	3300034643	Soil	MNGPLLISLLPPEQLVEIAEAPPEQVPYVVAILLLAGILLSLWM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048394

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences