Metagenome Family F048372

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F048372
Family Type	Metagenome
Number of Sequences	148
Average Sequence Length	51 residues
Representative Sequence	MFSVNMVNTKVVYNFLILLVLKFHDFRPDGLGVIDFTSLLSAFACALNRSE
Number of Associated Samples	64
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.62 %
% of genes near scaffold ends (potentially truncated)	43.92 %
% of genes from short scaffolds (< 2000 bps)	97.30 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (99.324 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (95.270 % of family members)
Environment Ontology (ENVO)	Unclassified (97.297 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (95.946 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.10% β-sheet: 0.00% Coil/Unstructured: 51.90%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF03732	Retrotrans_gag	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
All Organisms	root	All Organisms	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
cellular organisms	root	All Organisms → cellular organisms	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.32 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006237\|Ga0097621_102064682	Not Available	545	Open in IMG/M
3300006881\|Ga0068865_100360108	Not Available	1181	Open in IMG/M
3300014486\|Ga0182004_10011966	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	6931	Open in IMG/M
3300015267\|Ga0182122_1052660	Not Available	551	Open in IMG/M
3300015268\|Ga0182154_1008644	Not Available	893	Open in IMG/M
3300015268\|Ga0182154_1022724	Not Available	695	Open in IMG/M
3300015268\|Ga0182154_1047555	Not Available	570	Open in IMG/M
3300015269\|Ga0182113_1030446	Not Available	711	Open in IMG/M
3300015269\|Ga0182113_1042111	Not Available	647	Open in IMG/M
3300015269\|Ga0182113_1079700	Not Available	535	Open in IMG/M
3300015274\|Ga0182188_1022511	Not Available	656	Open in IMG/M
3300015275\|Ga0182172_1012542	Not Available	827	Open in IMG/M
3300015275\|Ga0182172_1014349	Not Available	799	Open in IMG/M
3300015275\|Ga0182172_1022234	Not Available	712	Open in IMG/M
3300015275\|Ga0182172_1035527	Not Available	629	Open in IMG/M
3300015276\|Ga0182170_1008910	Not Available	912	Open in IMG/M
3300015276\|Ga0182170_1029473	Not Available	663	Open in IMG/M
3300015276\|Ga0182170_1039930	Not Available	610	Open in IMG/M
3300015276\|Ga0182170_1041205	Not Available	605	Open in IMG/M
3300015276\|Ga0182170_1046739	Not Available	584	Open in IMG/M
3300015276\|Ga0182170_1061127	Not Available	540	Open in IMG/M
3300015279\|Ga0182174_1076583	Not Available	521	Open in IMG/M
3300015281\|Ga0182160_1003557	Not Available	1200	Open in IMG/M
3300015282\|Ga0182124_1055653	Not Available	565	Open in IMG/M
3300015282\|Ga0182124_1081595	Not Available	504	Open in IMG/M
3300015283\|Ga0182156_1015019	Not Available	832	Open in IMG/M
3300015285\|Ga0182186_1012391	Not Available	866	Open in IMG/M
3300015286\|Ga0182176_1075462	Not Available	524	Open in IMG/M
3300015289\|Ga0182138_1038000	Not Available	646	Open in IMG/M
3300015291\|Ga0182125_1081811	Not Available	526	Open in IMG/M
3300015292\|Ga0182141_1024137	Not Available	745	Open in IMG/M
3300015294\|Ga0182126_1067433	Not Available	560	Open in IMG/M
3300015294\|Ga0182126_1069598	Not Available	554	Open in IMG/M
3300015294\|Ga0182126_1082066	Not Available	528	Open in IMG/M
3300015294\|Ga0182126_1088102	Not Available	516	Open in IMG/M
3300015295\|Ga0182175_1028362	Not Available	724	Open in IMG/M
3300015295\|Ga0182175_1092622	Not Available	512	Open in IMG/M
3300015296\|Ga0182157_1041436	Not Available	661	Open in IMG/M
3300015298\|Ga0182106_1041810	Not Available	660	Open in IMG/M
3300015298\|Ga0182106_1043959	Not Available	650	Open in IMG/M
3300015299\|Ga0182107_1033080	Not Available	709	Open in IMG/M
3300015300\|Ga0182108_1072074	Not Available	568	Open in IMG/M
3300015300\|Ga0182108_1087721	Not Available	535	Open in IMG/M
3300015302\|Ga0182143_1089508	Not Available	528	Open in IMG/M
3300015303\|Ga0182123_1009346	Not Available	965	Open in IMG/M
3300015303\|Ga0182123_1094081	Not Available	510	Open in IMG/M
3300015305\|Ga0182158_1011949	Not Available	934	Open in IMG/M
3300015305\|Ga0182158_1032152	Not Available	712	Open in IMG/M
3300015305\|Ga0182158_1032432	Not Available	710	Open in IMG/M
3300015305\|Ga0182158_1046538	Not Available	641	Open in IMG/M
3300015307\|Ga0182144_1008633	Not Available	1039	Open in IMG/M
3300015307\|Ga0182144_1096442	Not Available	522	Open in IMG/M
3300015307\|Ga0182144_1100120	Not Available	515	Open in IMG/M
3300015307\|Ga0182144_1104130	Not Available	509	Open in IMG/M
3300015307\|Ga0182144_1104767	Not Available	508	Open in IMG/M
3300015308\|Ga0182142_1058566	Not Available	620	Open in IMG/M
3300015308\|Ga0182142_1078223	Not Available	568	Open in IMG/M
3300015308\|Ga0182142_1107141	Not Available	515	Open in IMG/M
3300015308\|Ga0182142_1113440	Not Available	505	Open in IMG/M
3300015314\|Ga0182140_1020807	Not Available	835	Open in IMG/M
3300015314\|Ga0182140_1064724	Not Available	604	Open in IMG/M
3300015314\|Ga0182140_1079805	Not Available	566	Open in IMG/M
3300015314\|Ga0182140_1085610	Not Available	554	Open in IMG/M
3300015322\|Ga0182110_1089099	Not Available	559	Open in IMG/M
3300015322\|Ga0182110_1099475	Not Available	540	Open in IMG/M
3300015322\|Ga0182110_1102793	Not Available	535	Open in IMG/M
3300015323\|Ga0182129_1024029	Not Available	801	Open in IMG/M
3300015323\|Ga0182129_1053789	Not Available	634	Open in IMG/M
3300015323\|Ga0182129_1105032	Not Available	518	Open in IMG/M
3300015341\|Ga0182187_1078497	Not Available	702	Open in IMG/M
3300015342\|Ga0182109_1046165	Not Available	894	Open in IMG/M
3300015343\|Ga0182155_1104206	Not Available	667	Open in IMG/M
3300015343\|Ga0182155_1207086	Not Available	518	Open in IMG/M
3300015345\|Ga0182111_1024705	Not Available	1157	Open in IMG/M
3300015345\|Ga0182111_1125830	Not Available	650	Open in IMG/M
3300015345\|Ga0182111_1207624	Not Available	536	Open in IMG/M
3300015346\|Ga0182139_1123497	Not Available	655	Open in IMG/M
3300015346\|Ga0182139_1168846	Not Available	582	Open in IMG/M
3300015346\|Ga0182139_1186814	Not Available	560	Open in IMG/M
3300015347\|Ga0182177_1085664	Not Available	753	Open in IMG/M
3300015347\|Ga0182177_1140817	Not Available	626	Open in IMG/M
3300015347\|Ga0182177_1142196	Not Available	624	Open in IMG/M
3300015347\|Ga0182177_1178125	Not Available	573	Open in IMG/M
3300015347\|Ga0182177_1197256	Not Available	550	Open in IMG/M
3300015351\|Ga0182161_1120183	Not Available	690	Open in IMG/M
3300015351\|Ga0182161_1193631	Not Available	573	Open in IMG/M
3300015351\|Ga0182161_1239689	Not Available	525	Open in IMG/M
3300015355\|Ga0182159_1077443	Not Available	950	Open in IMG/M
3300015355\|Ga0182159_1227323	Not Available	608	Open in IMG/M
3300015355\|Ga0182159_1240368	Not Available	594	Open in IMG/M
3300015355\|Ga0182159_1243230	Not Available	591	Open in IMG/M
3300015355\|Ga0182159_1274637	Not Available	560	Open in IMG/M
3300015355\|Ga0182159_1286245	Not Available	550	Open in IMG/M
3300015355\|Ga0182159_1337438	Not Available	511	Open in IMG/M
3300015361\|Ga0182145_1152880	Not Available	545	Open in IMG/M
3300015361\|Ga0182145_1159457	Not Available	537	Open in IMG/M
3300015361\|Ga0182145_1175566	Not Available	520	Open in IMG/M
3300017404\|Ga0182203_1077204	Not Available	642	Open in IMG/M
3300017404\|Ga0182203_1105237	Not Available	582	Open in IMG/M
3300017409\|Ga0182204_1120214	Not Available	501	Open in IMG/M
3300017410\|Ga0182207_1034873	Not Available	853	Open in IMG/M
3300017411\|Ga0182208_1038338	Not Available	729	Open in IMG/M
3300017411\|Ga0182208_1081591	Not Available	582	Open in IMG/M
3300017411\|Ga0182208_1119566	Not Available	515	Open in IMG/M
3300017415\|Ga0182202_1046222	Not Available	712	Open in IMG/M
3300017415\|Ga0182202_1097259	Not Available	565	Open in IMG/M
3300017415\|Ga0182202_1135863	Not Available	506	Open in IMG/M
3300017417\|Ga0182230_1094820	Not Available	548	Open in IMG/M
3300017420\|Ga0182228_1073882	Not Available	616	Open in IMG/M
3300017420\|Ga0182228_1075724	Not Available	611	Open in IMG/M
3300017424\|Ga0182219_1024515	Not Available	866	Open in IMG/M
3300017424\|Ga0182219_1097340	Not Available	564	Open in IMG/M
3300017424\|Ga0182219_1129361	Not Available	516	Open in IMG/M
3300017425\|Ga0182224_1064760	Not Available	678	Open in IMG/M
3300017425\|Ga0182224_1085229	Not Available	623	Open in IMG/M
3300017430\|Ga0182192_1058812	Not Available	730	Open in IMG/M
3300017430\|Ga0182192_1132978	Not Available	552	Open in IMG/M
3300017433\|Ga0182206_1078575	Not Available	631	Open in IMG/M
3300017433\|Ga0182206_1091610	Not Available	601	Open in IMG/M
3300017433\|Ga0182206_1099931	Not Available	584	Open in IMG/M
3300017433\|Ga0182206_1101961	Not Available	580	Open in IMG/M
3300017436\|Ga0182209_1117951	Not Available	571	Open in IMG/M
3300017438\|Ga0182191_1044875	Not Available	800	Open in IMG/M
3300017438\|Ga0182191_1057665	Not Available	739	Open in IMG/M
3300017438\|Ga0182191_1107904	Not Available	602	Open in IMG/M
3300017442\|Ga0182221_1011372	Not Available	1137	Open in IMG/M
3300017442\|Ga0182221_1041975	Not Available	773	Open in IMG/M
3300017443\|Ga0182193_1103403	Not Available	629	Open in IMG/M
3300017443\|Ga0182193_1124982	Not Available	590	Open in IMG/M
3300017682\|Ga0182229_1033221	Not Available	891	Open in IMG/M
3300017684\|Ga0182225_1016619	Not Available	991	Open in IMG/M
3300017684\|Ga0182225_1040396	Not Available	746	Open in IMG/M
3300017685\|Ga0182227_1025951	Not Available	1009	Open in IMG/M
3300017685\|Ga0182227_1043902	Not Available	786	Open in IMG/M
3300017685\|Ga0182227_1056823	Not Available	704	Open in IMG/M
3300017685\|Ga0182227_1076901	Not Available	623	Open in IMG/M
3300017685\|Ga0182227_1110140	Not Available	544	Open in IMG/M
3300017686\|Ga0182205_1047651	Not Available	768	Open in IMG/M
3300017686\|Ga0182205_1123515	Not Available	563	Open in IMG/M
3300017689\|Ga0182231_1044576	Not Available	831	Open in IMG/M
3300017689\|Ga0182231_1064178	Not Available	693	Open in IMG/M
3300017689\|Ga0182231_1094236	Not Available	576	Open in IMG/M
3300021060\|Ga0182232_1073895	Not Available	556	Open in IMG/M
3300025938\|Ga0207704_11384175	Not Available	603	Open in IMG/M
3300025942\|Ga0207689_10753357	Not Available	822	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	95.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.03%
Roots	Host-Associated → Plants → Roots	2.03%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	95.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.03%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.35%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	95.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.03%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.35%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	95.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.03%
Root	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.68%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300014486	Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017417	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017689	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300021060	Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MG	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0097621_1020646821	3300006237	Miscanthus Rhizosphere	VDMLNTKVVDNFLILLFLKFHDFRPDGLGVIDFRSLLSGFACPLDRSE*
Ga0068865_1003601081	3300006881	Miscanthus Rhizosphere	MIFSVNVLNTKVVDKFLILLFQKFLDFRHADLGVIDFTSLLSVFACALNRSE*
Ga0182004_100119669	3300014486	Root	MMFSMIMVNTKLVDNFIMLIVLKFHDHRTDGLGVADFTSLLSGFACPLDRPE*
Ga0182004_102922691	3300014486	Root	NTKLVDNFIILIVLKFHDHRTDGLGVADFTNLLSGFACPLDGPE*
Ga0182122_10526601	3300015267	Miscanthus Phyllosphere	MNVVNTKVVDNFLILLVLKCNDFRPDGLGVIVFRSLLSGLACPLNRSE*
Ga0182154_10086441	3300015268	Miscanthus Phyllosphere	MMFSVNVVNTKVVDNFLILLFLKFHDFRPDGLGVIDFTNLLSAFACALSRSE*
Ga0182154_10227241	3300015268	Miscanthus Phyllosphere	LVDQMMFYVNMVNIKVVDNFLILLFLKCHDFRPAGLGVIDFTSLLLAFACALNRSE*
Ga0182154_10475551	3300015268	Miscanthus Phyllosphere	MMFSVDMLNIKVVDIFLILLVLKFHDFRPAGLGVTDFTTLLSDFACPLNRSE*
Ga0182113_10304461	3300015269	Miscanthus Phyllosphere	MMQIMFSMNVLNTKVVDKFLILLFLEFHDFMLDCLGVIDFISLLSGFACPLDRSE*
Ga0182113_10421111	3300015269	Miscanthus Phyllosphere	MFSMNVLNAKVVDKFHILLVLKFHDFRPAGLGVIDFTSLLSAFACALNKSK*
Ga0182113_10797001	3300015269	Miscanthus Phyllosphere	MFYVDMLNTKVVDNFLILLFLKFQDFRPDGLGVIDFTILLSAFAYAMFRSERLCCLT*
Ga0182188_10225111	3300015274	Miscanthus Phyllosphere	MFTVNMVNTKVVDNFLIFFILKFHDFRPDGLGVIDFTSLLSTFACALNRFE*
Ga0182172_10125421	3300015275	Miscanthus Phyllosphere	DQMMFFINGVNTKVIYNLLILLVLKFNDFRPDGLGVIDFRNLLSGFACPRDRSE*
Ga0182172_10143491	3300015275	Miscanthus Phyllosphere	MRISVDVVNTKVADNFLVLLFLKFLEFSPDGLGVIDFRSLLSGFACPLDRSE*
Ga0182172_10222341	3300015275	Miscanthus Phyllosphere	AINFVVIMRIDVDVVNTKVAYNFLIFFVLKFHDFRPDGLGVIDFTSLLSAFACALNRSE*
Ga0182172_10355271	3300015275	Miscanthus Phyllosphere	MFSVDMLNTKVVDNFLILLFLKFHDFMPDGLGVIDFTILLSPFACALNRSE*
Ga0182170_10089102	3300015276	Miscanthus Phyllosphere	MMFSVDMLNTKVVDNFLIFLFLKVHDFRPDGLGVIDFTSLLSGFACPLDISE*
Ga0182170_10294731	3300015276	Miscanthus Phyllosphere	MMQMIFYVDLLNTKVVYNFLIFLVLKFYDLRTNGLGVIDFTSLLSAFACALNRSE*
Ga0182170_10399301	3300015276	Miscanthus Phyllosphere	MMQIMFSMNMLNTKVIDKFLILLFIEFHYFRPDGLGVIHFTNLMSGFACSLDSSE
Ga0182170_10412051	3300015276	Miscanthus Phyllosphere	MMFYVNMVNTKVVDNFLILIFLKFHDFRPAGLGVIDFTSLLSAFACALNRSE*
Ga0182170_10467391	3300015276	Miscanthus Phyllosphere	MRIYVDVVNTKVVDNFLILLVLKFYDFRPAGLVVIEFRSLLSGFVGPLNRSE*
Ga0182170_10611271	3300015276	Miscanthus Phyllosphere	TKVVDNFLIFLVLKFHDFRPTGLEVIDFTNLLSAFACALNRSE*
Ga0182174_10765831	3300015279	Miscanthus Phyllosphere	MDVVNTKVAYNFLILLFLKFHDFRPDGLGVIDFRSLLSGFACPLDRSE*
Ga0182160_10035571	3300015281	Miscanthus Phyllosphere	MDVVNTKVAYNFLILLVLKFHDFRPDSLGVIDFRSLLSGFACPLDRSK*
Ga0182160_10310591	3300015281	Miscanthus Phyllosphere	CIFCFDDNFVDQMMFSVNKMNTKVVDNFLKFHDFRHDGLGVIDFRNLLSAFACALNKSK*
Ga0182124_10556531	3300015282	Miscanthus Phyllosphere	VMNTKVVYNFLILSVLKFHDFRPAGLGDIDFRSLLSGFAGPLNRSE*
Ga0182124_10815951	3300015282	Miscanthus Phyllosphere	MFSIDMLNTKVVDNFLILLFLKVHDFRPAGLGVIDFTSLLSAFACALNRSE*
Ga0182156_10150191	3300015283	Miscanthus Phyllosphere	MDQMMFSINMVTAKVVDNFLILIFLKFHDLRHDGLGVIDFRSLLSGFACPLDR*
Ga0182186_10123911	3300015285	Miscanthus Phyllosphere	MISYVNVVNTKVVDRFLILLVLTFHDFGPDGLGVIDFRSLLLGFVGLLNRSE*
Ga0182176_10754621	3300015286	Miscanthus Phyllosphere	NTKVVDNFLIFLVLKFYDFRLAGLGVIDFTSLLSAFACALNRSE*
Ga0182138_10380001	3300015289	Miscanthus Phyllosphere	MQLMFSINVMNTKVVDNFHILLVLKCHDFMPDGLGVIDFRNLLSAFACALNKSK*
Ga0182125_10818111	3300015291	Miscanthus Phyllosphere	FYVNMVNTKVVYNFLILLFLKVQDFRPSSLGVIDFTSLLSDFACALNRSE*
Ga0182141_10241371	3300015292	Miscanthus Phyllosphere	QMMFSVTVMNTKVVYNFLILSVLKFHDFRPAGLGDIDFRSLLSGFAGPLNRSE*
Ga0182126_10674331	3300015294	Miscanthus Phyllosphere	MRISVDAVNTKVTDNFLILLVLKFHDFRPDGLGVIDFTILLSGFMCPLDRSE*
Ga0182126_10695981	3300015294	Miscanthus Phyllosphere	KVVDNFLILLVLKFYDFSPDGFGVIDLRSLLSGFACPLDRSK*
Ga0182126_10820661	3300015294	Miscanthus Phyllosphere	MMQVMFSVNVVNTKDVYNFLILLVLKFHDFRPAGLGVIDFRSLLLGFAGLLNRSD*
Ga0182126_10881021	3300015294	Miscanthus Phyllosphere	NTKVVDNFLILLVLKFYDFRPTSLGVIDFTILLSTFACALNRSE*
Ga0182175_10283621	3300015295	Miscanthus Phyllosphere	MDQMMFSVNVVNTKVLDNFLILLVLKFHDLRPAGLGVIDFRSLLLGFVGLLNRSD*
Ga0182175_10926221	3300015295	Miscanthus Phyllosphere	TKVVDNFLFLCFLKFHDFSPAGLGVIDFRTLLSGFASPLNRSE*
Ga0182157_10414361	3300015296	Miscanthus Phyllosphere	KVVDNFLILLCLKFQYFRPDGFGVIDFTSLLSAFACALNKSK*
Ga0182106_10418101	3300015298	Miscanthus Phyllosphere	MFSINMVNTKVVDNFLILLFLKFHDFRLDGLGVIDFRSLLSGFACPLDRSE*
Ga0182106_10439591	3300015298	Miscanthus Phyllosphere	KVADNFLILLVLKFHDFRPEGLGVIDFTNLLSGFACPMDRSE*
Ga0182106_10873711	3300015298	Miscanthus Phyllosphere	KVVYKFLILIDLKFHDFRPAGLGVTDFTSFLSAFPCALNRSE*
Ga0182107_10330801	3300015299	Miscanthus Phyllosphere	MRIYVDVVNTKVVYNFLILLVLKFHDFRADGLGVIDFTSLLSGFACPLDRSE*
Ga0182108_10720741	3300015300	Miscanthus Phyllosphere	NMVNTKVVDNFLILLFLKFHDFRSTGLGVIDFTSLLSAFACALNRSE*
Ga0182108_10877211	3300015300	Miscanthus Phyllosphere	MFNVNVENTKVVYNFLILLVLKFHDFRPAGLGVIDFRSLLSGFAGPLNRSE*
Ga0182143_10895081	3300015302	Miscanthus Phyllosphere	IMRIDVDVVNTKVAYNFLIFFVLKFHDFRPDGLGVIDFRSLLSGFACPLDRSE*
Ga0182123_10093461	3300015303	Miscanthus Phyllosphere	MSSVNVVNMKVVDNFLILRFLKFHDFRPDGLGVIDFRILLLAFACALNKSE*
Ga0182123_10940811	3300015303	Miscanthus Phyllosphere	VIMSISVDVVNTKVAYNFLILLVLKFHDFRLDGLGVIDFRSLLLGFACPLDRSE*
Ga0182158_10119492	3300015305	Miscanthus Phyllosphere	LNTKVVDNFLILLFQKFHDFRPAGLGVIYFTSLLSAFACALNRSE*
Ga0182158_10321521	3300015305	Miscanthus Phyllosphere	MKFSVNLVNTKVVDNFLILLVLKCNDFRPDGLGVIVFRSLLSGLACPLNRSE*
Ga0182158_10324321	3300015305	Miscanthus Phyllosphere	MFSIDMLNTKVVHNFLILLVLEFHDFRSTGLGVRDFTNLLSDFACALNRSE
Ga0182158_10465381	3300015305	Miscanthus Phyllosphere	MVNTKVVDNFLILLFLKFDDCRPDGLGVIDFTSLLSTLACA
Ga0182144_10086332	3300015307	Miscanthus Phyllosphere	MQLMFSINVMNTKVVDNFHILLVLQFHDFRPDGLGVIDFRNLLSAFACALNKSK
Ga0182144_10964421	3300015307	Miscanthus Phyllosphere	NFLILLVLKFHDFRPDGLGVIDFRSCCQVFACPLDRSE*
Ga0182144_11001201	3300015307	Miscanthus Phyllosphere	MFDVNMLNKKVVDNFFVFLVIKFYNFRPAGSRVIYFTSLLSAFACALNRSE*
Ga0182144_11041301	3300015307	Miscanthus Phyllosphere	VVIMRIDVDVVNTKVAYNFLIFFVLKFHDFRPDGLGVIDFRSLLSGFACPLNRSE*
Ga0182144_11047671	3300015307	Miscanthus Phyllosphere	MMFSINMVNTKLVDNFLIFLVLKFHDFRPFGLGVIDFRSLLLGFVGLLNRSD*
Ga0182142_10585661	3300015308	Miscanthus Phyllosphere	MDQMMFSINMVNTKVVYKLLILLVLKYQDFSPDGLGVIDFRISCQVFACALDRSE*
Ga0182142_10782231	3300015308	Miscanthus Phyllosphere	EIMFAVNVVNTKVVYNLLILIVQRFHDFRPDGLGVIDFKSLLSGSACPLNRSE*
Ga0182142_11071411	3300015308	Miscanthus Phyllosphere	EIMFAVNVVNTKVVYNLLILIVQRFHDFRPDGLGVIDFTSLLSAFACALNRSE*
Ga0182142_11134401	3300015308	Miscanthus Phyllosphere	MKLMFSVNVLNTKVVDDFHIFLIQQFHDFRATSLGVIDFIISLSVFACF
Ga0182140_10208072	3300015314	Miscanthus Phyllosphere	MMFPVDMLNTKVVDNVLILLVLKFYDFRLEDLGVIEFTSLLSAFACAPNRSE*
Ga0182140_10647241	3300015314	Miscanthus Phyllosphere	MRISVDVVNTKVADNFLILLVLKFHDFRPDGLGVIDFRNLLSGFACPLGRSE*
Ga0182140_10798051	3300015314	Miscanthus Phyllosphere	MMFYVDMLNTKVVHNFLIFLVLKFHDFRPDGLGVIDFTNLLSGFACPLGRSE*
Ga0182140_10856101	3300015314	Miscanthus Phyllosphere	VKQMMFYEDVVNTKVVDNFLILLFLKFRDFRPAGLGVIDFTNLLSAFAWVLKRSE*
Ga0182110_10890991	3300015322	Miscanthus Phyllosphere	VKIIFSVFVVYTKVVANLMMLVVLKFHDFRPAGLGVIDFTSFLSGFAYV
Ga0182110_10994751	3300015322	Miscanthus Phyllosphere	MMFSVNIVNTKVVDNFLIFLLLKFYDFRPDDLGVIDFTILLSDFACPRDISE*
Ga0182110_11027932	3300015322	Miscanthus Phyllosphere	TKVVDNFVIFLVLKVHDFMPDGLGVINFTSLLSGFACPLDKCE*
Ga0182129_10240292	3300015323	Miscanthus Phyllosphere	MMFSENVVNTKVVYNFLILLVLKFHDFRPAGLGVIYFGSFLSGFAGPLNRFE*
Ga0182129_10537891	3300015323	Miscanthus Phyllosphere	MFSINMVTAKVVDNFLILIFLKFHDLRHDGLGVIDFRSLLSGFFACPLDRSK*
Ga0182129_11050321	3300015323	Miscanthus Phyllosphere	VDPMMFSVNMVNTKVVDNFLIFLFLKFHDFRPDGLGVIDFRSLLSGFACPLDRSE*
Ga0182187_10784971	3300015341	Miscanthus Phyllosphere	TKVVDNLLIFLVQRFHDFRPDGLEVIDFRSCLSGFACPLNKPE*
Ga0182109_10461651	3300015342	Miscanthus Phyllosphere	MMKMMFSVNVLNTKVVDNFLILLVLKFHDFRPDGLGVIDFRSLLSGFFACPLDISE*
Ga0182155_11042061	3300015343	Miscanthus Phyllosphere	TKVVDNVLILLVLKFYGFSPDGLGVIDFRSLLSGFVCPLNRSE*
Ga0182155_12070861	3300015343	Miscanthus Phyllosphere	MNQMMFSINMVNTKVVYNFLILLVLKFHDFKPAGLGVIDFTNLLSTFACALNKSE*
Ga0182111_10247052	3300015345	Miscanthus Phyllosphere	MRISMDVVNTKVVDNFLVFLFQKFLEFRPDGLGVIDFRSLLSGFACPLDRSK*
Ga0182111_11258301	3300015345	Miscanthus Phyllosphere	MMFSINGVNTKVVDNFLILLVLKVHDFRPDGLGVIDFRSLLSGFACPLDRSE*
Ga0182111_12076241	3300015345	Miscanthus Phyllosphere	TKVVDKFLILLFLKFHDFRLAGLGVIDFTSLLSGFACPLDRSE*
Ga0182139_11234971	3300015346	Miscanthus Phyllosphere	MMFSVDMLNTKVVDNVLIFLVLKFHDFWPAGSRVIDFTSLLSAFACPLNRSE*
Ga0182139_11688461	3300015346	Miscanthus Phyllosphere	MMSSVDVVNRKVVDNLIILLILNFHDFRPDGLGAIDFIISLSGFACPLNKPE*
Ga0182139_11868141	3300015346	Miscanthus Phyllosphere	MDQMMFFINGVNTKVIYNLLILLVLKFNDFRPDGLGVIDFRSLVSGFACPLDRFE*
Ga0182177_10856641	3300015347	Miscanthus Phyllosphere	MFSVNVLITKVVDKFLIWLGLKFHDFRPAGLGVIDFTSLLLAFAYALNRSE*
Ga0182177_11408171	3300015347	Miscanthus Phyllosphere	MFPVDILNTKVVDNFLILLVLKFYDFRPVGLGVIDFRSLLSGFACPLNRSK*
Ga0182177_11421962	3300015347	Miscanthus Phyllosphere	MNVLNTKAVNKLIIFLFPEFHDFRPEGLGVIDFTNLLSGFACPMDRSE*
Ga0182177_11781252	3300015347	Miscanthus Phyllosphere	SVNMVNIKVVYNFVIFLVLKFHDFRPDGLGVIDFRSLLSGFACPLDR*
Ga0182177_11972561	3300015347	Miscanthus Phyllosphere	MLNTNVVDKFLLLVFLKIDDFRPDDVGVINFTSLLSAFACALNRSE*
Ga0182161_11201831	3300015351	Miscanthus Phyllosphere	MMQIMFYTDMLNTKVVDNFLILLVLEFHDFSPAGLGVIDFTTLLSAFACALNRYE*
Ga0182161_11936311	3300015351	Miscanthus Phyllosphere	MVIMRISVDVVNTKVADNFLILLVLKFYDFRPDGLGVIDFRSLLSHFACPLDRSK*
Ga0182161_12396891	3300015351	Miscanthus Phyllosphere	VMQMMFYVDMLNTKVVYNFLIFLVLKFHDFRPAGLGVIDFRSLLLGFVGLLNRSD*
Ga0182159_10774431	3300015355	Miscanthus Phyllosphere	TKVVDNFYILVFLKFQDFRPAGLGVIDFTGSLSSFAYALYRSEMLHCLT*
Ga0182159_12273232	3300015355	Miscanthus Phyllosphere	LNTKVVDKFLILLVLKFHDFIPSGLGVIDFTSLLSAFACPLDRSE*
Ga0182159_12403682	3300015355	Miscanthus Phyllosphere	KVVYNLLILIVQRVHDFRPDGLGVIDFRSLLSGFACPLNKPE*
Ga0182159_12432301	3300015355	Miscanthus Phyllosphere	MQIMLSVDMWNTKVVDNFLILLVLKFHDFSPAGLGVIDFTSLLSAFACALSRSE*
Ga0182159_12746372	3300015355	Miscanthus Phyllosphere	MMFFESMVNTKVVDNFLILLVLKFHDFRPDGLGVIDFRSLLSGFFACPLDISE*
Ga0182159_12862451	3300015355	Miscanthus Phyllosphere	MFSVNVVNKKVVDKFLILLVLKFYDLSPASLGVIDFRSLLSGFACPLNRSE*
Ga0182159_13374381	3300015355	Miscanthus Phyllosphere	VYMMFPVNVVNTKVVDKFLILLVLKFHDFMPDGLGVIDFTSLLSAFACALNRSE*
Ga0182145_11528801	3300015361	Miscanthus Phyllosphere	QMMFSVDILNTKVVDNFLILLFLKFQYFKPADLGVIDFKSLLSAFACALNRSE*
Ga0182145_11594571	3300015361	Miscanthus Phyllosphere	MFSVNMVNTKVVYNFLILLVLKFHDFRPDGLGVIDFISFLSAF
Ga0182145_11755661	3300015361	Miscanthus Phyllosphere	MFSVNGVSIKVVDNFLILLFLKFYDFRPDGLGVIEFRILLSGFACPLDRSK*
Ga0182203_10772041	3300017404	Miscanthus Phyllosphere	MFSVNVVNTKDVYNFLILLVLKFHDFRPAGLGVIDFRSLLLGFVGLLNRSD
Ga0182203_11052371	3300017404	Miscanthus Phyllosphere	MMQMMFPVNLVNTKLVDKFLILLALKFHDFRPDGLGVIDFTSLLSAFACALNRSE
Ga0182204_11202141	3300017409	Miscanthus Phyllosphere	KVADNFLILLVLKFHDFRPSDLGVIDFRNFLSGFACPLDRSE
Ga0182207_10348731	3300017410	Miscanthus Phyllosphere	MVIMMFSVNVLNTNIVDKFLILVFLKLDDFRPDDEGVIDFTSLLSAFACALNRYE
Ga0182208_10383381	3300017411	Miscanthus Phyllosphere	TKVVDNLLILLVLKFYDFKPAGLGVIDFTSLLSTFACALNRSE
Ga0182208_10815911	3300017411	Miscanthus Phyllosphere	MIQMKFSMNVVNTKVVSHFLILLVLKFQDFRPACLGVIDFRSLLPGFAGPLN
Ga0182208_11195661	3300017411	Miscanthus Phyllosphere	MFSVDMLNKKVVDNFLILLVLKFHDVRPAGLGVIDFTSLLSAFACALNRSE
Ga0182202_10462221	3300017415	Miscanthus Phyllosphere	QMIFSVDMLNTKVVNNFLILLVLKFQDFRPAALGVIDFTSLLSTFACALNRSE
Ga0182202_10972591	3300017415	Miscanthus Phyllosphere	MQMMFSVNVLNTKVVDKFLIFLFIKFHDFRPACLGVIDFTSLLSAF
Ga0182202_11358631	3300017415	Miscanthus Phyllosphere	MLNTKVVYNFLIFLVLNFNDFRPAGLGVIDFTSLLSAFACALNRSE
Ga0182230_10948201	3300017417	Miscanthus Phyllosphere	VVDNFLILLVLKFHDFRPAGLGVIDFTSLLSAFACPLNRSE
Ga0182228_10738821	3300017420	Miscanthus Phyllosphere	MQMMFSVNVVNTKVADNFLVVLVLKFHDFRPDGLGVIDFTSLLSAFACALNRSE
Ga0182228_10757241	3300017420	Miscanthus Phyllosphere	MRISEDMVNTKVADNFLILLVLKFYDFRPDGLGVIDFRSLLSHFACPLDRSK
Ga0182219_10245151	3300017424	Miscanthus Phyllosphere	MVIMMFYVNVLNTKVVDKFLILLVLKFHDFRPDHLGLIDFTNLLSASGCALNISE
Ga0182219_10973401	3300017424	Miscanthus Phyllosphere	MFSVNVLNTKVVDKFLILFVIKFHDFRPAGLGVIGLRSLLSGFAGPLNXSKXLYCLTY
Ga0182219_11293611	3300017424	Miscanthus Phyllosphere	MQLMFSINVMNTKVVDNFHILLVLKCHDFMPDGLGVIDFRNLLSAFACALNKSE
Ga0182224_10647601	3300017425	Miscanthus Phyllosphere	MFSVNMVNTKVVYNFLILLVLKFHDFRPDGLGVIDFTSLLSAFACALNRSE
Ga0182224_10852291	3300017425	Miscanthus Phyllosphere	MFSIDMLNTKVVDNFLILLFLKFHDFRPDGLGVIDFTILLSPFACALNRSEXLYCLAY
Ga0182192_10588121	3300017430	Miscanthus Phyllosphere	MFYVNMVNIKVVDNFLILLFLKCHDFRPAGLGVIDFTSLLLAFACALNRSE
Ga0182192_11329781	3300017430	Miscanthus Phyllosphere	MKQMMFSIDMLNTKIVDNFLVLKFHDFRPAGLGDIDFRSLLSGFAGPLNRSE
Ga0182206_10785751	3300017433	Miscanthus Phyllosphere	VDMLNTKVVDNFIMLLLVKFHDFRHDILGVIDFTILLSTFVCALNRSK
Ga0182206_10916101	3300017433	Miscanthus Phyllosphere	MRIDVDVVNTKVAYNFLIFLVLKFHDFRPDGLGVIDFRSLLSGFACPLDRSE
Ga0182206_10999312	3300017433	Miscanthus Phyllosphere	IMRVYVDVVNTKVADNFIILLFLKFHDFRPNGLGVIDFRILLSSFCMSSGQI
Ga0182206_11019611	3300017433	Miscanthus Phyllosphere	MDVVNTKVADNILILLVLKFHDLRPDGLGVIDFRSLLSGFACPLDRSE
Ga0182209_11179511	3300017436	Miscanthus Phyllosphere	MRISVDVVNTKVADNFLILLVLKFQDFRRNGLGVIDFRSLLSGFACPLDRSE
Ga0182191_10448751	3300017438	Miscanthus Phyllosphere	MNVVNTKVVDNFLILLFLKFHNFSPDGLGVIDFTSLLSAFAYALFRSERLC
Ga0182191_10576651	3300017438	Miscanthus Phyllosphere	VDVVNTKVADNFLVLLFLKFLEFSPDGLGVIDFRSLLSGFACPLDRSE
Ga0182191_11079041	3300017438	Miscanthus Phyllosphere	MSISVDVVNTKVAYNFLIFLVLKFHDFRPDGLGVIDFRSLLSGFACPLNKHE
Ga0182221_10113721	3300017442	Miscanthus Phyllosphere	MDQMMFYVNMVNTKVVDNFLILLFLKFDDCRPDGLGVIDFTSLLSSLECA
Ga0182221_10419751	3300017442	Miscanthus Phyllosphere	MMFYVDMLNTKVVYNFLILLVPKFHDFRLAGLGVIDFISLLSTFARALNRSK
Ga0182193_11034031	3300017443	Miscanthus Phyllosphere	MFSINMVNTKVVYNFLILLVLKFHDFRPDGLGVIDFRSLLSGFACPLDRYE
Ga0182193_11249821	3300017443	Miscanthus Phyllosphere	MFSVNVVNTRIVYNFLILLVLKFHDFRPDGLGDIDFRSLLSGFACPLD
Ga0182229_10332211	3300017682	Miscanthus Phyllosphere	FYVDMLNKKIVDNFLIFLVLKIHDFRPDSLGVIDFTSLLAGFACPLDRSE
Ga0182225_10166191	3300017684	Miscanthus Phyllosphere	MFYIDMLNTKVVYNFLIFLVLKFHDFRPAGLGVIDFTILLSAFACALNRSE
Ga0182225_10403961	3300017684	Miscanthus Phyllosphere	NVVSTKVVDNLLILIFQRFHDFRPDSLALIDFRSLLSGFACPLNKPE
Ga0182227_10259512	3300017685	Miscanthus Phyllosphere	MFPVDILNTKVVDNFLILLFLKFHDFMPDGLGGIDFRSLQLGFAGPLNRD
Ga0182227_10439021	3300017685	Miscanthus Phyllosphere	MQMMFYVNMMNTKVVDNFYILVFLKFQDFRPAGLGVIDFTGSLSSFAYALYRSEILHCL
Ga0182227_10568231	3300017685	Miscanthus Phyllosphere	VVIIRISKDVVKTKVADNFLILLVLKFHNFRPDGLGVIDFRSLLSGFAYPLNKPE
Ga0182227_10769011	3300017685	Miscanthus Phyllosphere	MDQMMFYVNMVNTKVVYNFLILLVLKFHDFRPDGLGVIDFTSLLSGFACPLDRSE
Ga0182227_11101401	3300017685	Miscanthus Phyllosphere	MMFSVNVLNTKVVDKFLILLVLKFYDFRPTGLGVIDFTSLLSGFACPLDRSE
Ga0182205_10476511	3300017686	Miscanthus Phyllosphere	VNMVNTKVVDKFLIFIGLKFHDFRPDGLGVIDFTSLLSAFACALNRSEXLYCLAY
Ga0182205_11235151	3300017686	Miscanthus Phyllosphere	IQMKFSVNLVNTKVVDNFLILLVLKCNDFRPDGLGVIVFRSLLSGLACPLNRSE
Ga0182231_10445761	3300017689	Miscanthus Phyllosphere	NFVMKMMFSVNVLNTKVVYKFLILLVLKFHDFRPDGLAVIDFKILLSGFPGLLNRS
Ga0182231_10641781	3300017689	Miscanthus Phyllosphere	MIFSIDMLNTKVVDNFLILLFLKFHDFRPDGLGVIDFTILLSPF
Ga0182231_10942361	3300017689	Miscanthus Phyllosphere	MFYVNMVNTKVVDNFLIFLFLKFHDFRPDNLGVIDFRSLLSGFCMPSRQI
Ga0182232_10738951	3300021060	Phyllosphere	KVVDNFLILLVIKFHDFMPDGLGVIDFIILLSTFACALNRSE
Ga0207704_113841751	3300025938	Miscanthus Rhizosphere	MFSVNMVNIKVVDKFLILRVLKVHDFRPAGLGVIDFTSLLSAFACALNRS
Ga0207689_107533571	3300025942	Miscanthus Rhizosphere	VDQNIFYVNMVSTKVVDNFLILLVIKFHDFRPAGLGVIDFTSLLSAFAFALNISE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F048372

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences