Metagenome / Metatranscriptome Family F048330

Basic Information
Family ID	F048330
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	37 residues
Representative Sequence	NRFIVLVDNSIEISNISLTPKDLIDTHHIMTLIMKS
Number of Associated Samples	123
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.14 %
% of genes near scaffold ends (potentially truncated)	92.57 %
% of genes from short scaffolds (< 2000 bps)	85.81 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (73.649 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater (18.243 % of family members)
Environment Ontology (ENVO)	Unclassified (52.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.270 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.75% β-sheet: 0.00% Coil/Unstructured: 56.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF03306	AAL_decarboxy	14.19
PF10503	Esterase_PHB	9.46
PF01381	HTH_3	5.41
PF00578	AhpC-TSA	4.73
PF08281	Sigma70_r4_2	2.70
PF04264	YceI	2.70
PF12867	DinB_2	2.70
PF09603	Fib_succ_major	2.03
PF10067	DUF2306	1.35
PF13360	PQQ_2	0.68
PF09685	DUF4870	0.68
PF13585	CHU_C	0.68
PF12848	ABC_tran_Xtn	0.68
PF13517	FG-GAP_3	0.68
PF01926	MMR_HSR1	0.68
PF01638	HxlR	0.68
PF00593	TonB_dep_Rec	0.68
PF02321	OEP	0.68
PF02897	Peptidase_S9_N	0.68
PF06241	Castor_Poll_mid	0.68
PF03382	DUF285	0.68
PF14255	Cys_rich_CPXG	0.68
PF00486	Trans_reg_C	0.68
PF00027	cNMP_binding	0.68
PF02492	cobW	0.68
PF14509	GH97_C	0.68
PF00332	Glyco_hydro_17	0.68
PF12695	Abhydrolase_5	0.68
PF13412	HTH_24	0.68
PF09912	DUF2141	0.68
PF13432	TPR_16	0.68
PF11196	DUF2834	0.68
PF04851	ResIII	0.68
PF01557	FAA_hydrolase	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG3527	Alpha-acetolactate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	14.19
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	2.70
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.35
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.68
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.68
COG1770	Protease II	Amino acid transport and metabolism [E]	0.68
COG5309	Exo-beta-1,3-glucanase, GH17 family	Carbohydrate transport and metabolism [G]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.32 %
Unclassified	root	N/A	25.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.65 %
Unclassified	root	N/A	25.68 %
Viruses	superkingdom	All Organisms → Viruses	0.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.65 %
Unclassified	root	N/A	25.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	54.05 %
Unclassified	root	N/A	25.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	40.54 %
Unclassified	root	N/A	25.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	40.54 %
Unclassified	root	N/A	25.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.68 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	27.70 %
Unclassified	root	N/A	25.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.68 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.68 %
Deltaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	25.68 %
Unclassified	root	N/A	25.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.68 %
Hyellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae	0.68 %
SAR324 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.68 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	15.54 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.68 %
Myxosarcina	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae → Myxosarcina	0.68 %
SAR324 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.68 %
Polaribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter	2.03 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	1.35 %
Maribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter	1.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
unclassified Cyclobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → unclassified Cyclobacteriaceae	0.68 %
unclassified Myxosarcina	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae → Myxosarcina → unclassified Myxosarcina	0.68 %
Nonlabens	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Nonlabens	0.68 %
Formosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa	0.68 %
SAR324 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.68 %
Maribacter antarcticus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → Maribacter antarcticus	1.35 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1.35 %
unclassified Polaribacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter → unclassified Polaribacter	1.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
Cyclobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → unclassified Cyclobacteriaceae → Cyclobacteriaceae bacterium	0.68 %
Myxosarcina sp. GI1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae → Myxosarcina → unclassified Myxosarcina → Myxosarcina sp. GI1	0.68 %
unclassified Formosa	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa	0.68 %
Nonlabens spongiae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Nonlabens → Nonlabens spongiae	0.68 %
SAR324 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.68 %
Maribacter antarcticus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → Maribacter antarcticus	1.35 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.35 %
Polaribacter sp. Hel1_33_78	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter → unclassified Polaribacter → Polaribacter sp. Hel1_33_78	0.68 %
Formosa sp. Hel1_33_131	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_131	0.68 %
Polaribacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter → unclassified Polaribacter → Polaribacter sp.	0.68 %
Cyclobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → unclassified Cyclobacteriaceae → Cyclobacteriaceae bacterium	0.68 %
Myxosarcina sp. GI1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae → Myxosarcina → unclassified Myxosarcina → Myxosarcina sp. GI1	0.68 %
Nonlabens spongiae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Nonlabens → Nonlabens spongiae	0.68 %
SAR324 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster	0.68 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10022978	All Organisms → cellular organisms → Bacteria	3588	Open in IMG/M
3300000101\|DelMOSum2010_c10147464	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	870	Open in IMG/M
3300000101\|DelMOSum2010_c10268498	Not Available	526	Open in IMG/M
3300000115\|DelMOSum2011_c10205003	Not Available	547	Open in IMG/M
3300000207\|SI48aug10_10mDRAFT_c1004050	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1530	Open in IMG/M
3300000224\|SI34jun09_10mDRAFT_1040647	All Organisms → cellular organisms → Bacteria → FCB group	649	Open in IMG/M
3300000225\|SI34jun09_120mDRAFT_1043945	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	913	Open in IMG/M
3300000254\|SI34jun09_100mDRAFT_1021572	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300000928\|OpTDRAFT_10059545	Not Available	671	Open in IMG/M
3300000928\|OpTDRAFT_10180445	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	650	Open in IMG/M
3300001351\|JGI20153J14318_10003594	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	10309	Open in IMG/M
3300001351\|JGI20153J14318_10173341	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300001352\|JGI20157J14317_10042821	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2181	Open in IMG/M
3300002154\|JGI24538J26636_10157790	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	542	Open in IMG/M
3300002186\|JGI24539J26755_10032902	Not Available	1705	Open in IMG/M
3300005747\|Ga0076924_1147756	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2303	Open in IMG/M
3300005837\|Ga0078893_10266718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster	829	Open in IMG/M
3300005837\|Ga0078893_10406891	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005837\|Ga0078893_11170998	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300005941\|Ga0070743_10076521	Not Available	1130	Open in IMG/M
3300005941\|Ga0070743_10110986	All Organisms → cellular organisms → Bacteria → FCB group	919	Open in IMG/M
3300006402\|Ga0075511_1011163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Hyellaceae → Myxosarcina → unclassified Myxosarcina → Myxosarcina sp. GI1	636	Open in IMG/M
3300006402\|Ga0075511_1766518	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	930	Open in IMG/M
3300006616\|Ga0101440_111092	All Organisms → cellular organisms → Bacteria → Proteobacteria	3737	Open in IMG/M
3300006643\|Ga0101445_108840	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3940	Open in IMG/M
3300007229\|Ga0075468_10210754	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300007552\|Ga0102818_1013117	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1642	Open in IMG/M
3300007552\|Ga0102818_1019298	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → Maribacter antarcticus	1346	Open in IMG/M
3300007553\|Ga0102819_1045401	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300007620\|Ga0102871_1055074	All Organisms → cellular organisms → Bacteria → FCB group	1167	Open in IMG/M
3300007715\|Ga0102827_1128900	Not Available	578	Open in IMG/M
3300007955\|Ga0105740_1084452	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300007962\|Ga0102907_1026558	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → unclassified Cyclobacteriaceae → Cyclobacteriaceae bacterium	1635	Open in IMG/M
3300007962\|Ga0102907_1046125	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1187	Open in IMG/M
3300008921\|Ga0103486_1006226	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	812	Open in IMG/M
3300008961\|Ga0102887_1052498	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1340	Open in IMG/M
3300008961\|Ga0102887_1116284	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300008999\|Ga0102816_1020583	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300009050\|Ga0102909_1067430	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	882	Open in IMG/M
3300009080\|Ga0102815_10238907	Not Available	1001	Open in IMG/M
3300009172\|Ga0114995_10021495	Not Available	3854	Open in IMG/M
3300009172\|Ga0114995_10258933	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	960	Open in IMG/M
3300009420\|Ga0114994_10391138	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	921	Open in IMG/M
3300009423\|Ga0115548_1008687	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	4548	Open in IMG/M
3300009423\|Ga0115548_1178158	All Organisms → cellular organisms → Bacteria → FCB group	663	Open in IMG/M
3300009425\|Ga0114997_10151126	All Organisms → cellular organisms → Bacteria → FCB group	1372	Open in IMG/M
3300009426\|Ga0115547_1283011	Not Available	517	Open in IMG/M
3300009434\|Ga0115562_1008023	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	6298	Open in IMG/M
3300009435\|Ga0115546_1169039	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	765	Open in IMG/M
3300009438\|Ga0115559_1038122	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter → unclassified Polaribacter → Polaribacter sp. Hel1_33_78	2163	Open in IMG/M
3300009438\|Ga0115559_1081836	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1296	Open in IMG/M
3300009447\|Ga0115560_1143704	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300009495\|Ga0115571_1061144	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter → unclassified Polaribacter → Polaribacter sp.	1713	Open in IMG/M
3300009497\|Ga0115569_10181468	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	984	Open in IMG/M
3300009505\|Ga0115564_10447595	All Organisms → cellular organisms → Bacteria → FCB group	627	Open in IMG/M
3300009507\|Ga0115572_10080035	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300009512\|Ga0115003_10221086	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1134	Open in IMG/M
3300009592\|Ga0115101_1428133	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2318	Open in IMG/M
3300012516\|Ga0129325_1044443	All Organisms → cellular organisms → Bacteria → FCB group	548	Open in IMG/M
3300012524\|Ga0129331_1124031	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300012936\|Ga0163109_10313216	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1149	Open in IMG/M
3300016726\|Ga0182045_1270909	Not Available	850	Open in IMG/M
3300016748\|Ga0182043_1194675	Not Available	837	Open in IMG/M
3300016791\|Ga0182095_1103886	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	753	Open in IMG/M
3300018418\|Ga0181567_10875408	Not Available	566	Open in IMG/M
3300020166\|Ga0206128_1123402	Not Available	1082	Open in IMG/M
3300020166\|Ga0206128_1231486	Not Available	690	Open in IMG/M
3300020185\|Ga0206131_10034321	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3732	Open in IMG/M
3300020187\|Ga0206130_10043304	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3324	Open in IMG/M
3300020187\|Ga0206130_10451582	Not Available	501	Open in IMG/M
3300020253\|Ga0211685_1063978	Not Available	520	Open in IMG/M
3300020431\|Ga0211554_10234073	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300021084\|Ga0206678_10400697	All Organisms → cellular organisms → Bacteria → FCB group	645	Open in IMG/M
3300021957\|Ga0222717_10234076	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1074	Open in IMG/M
3300021957\|Ga0222717_10245995	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1041	Open in IMG/M
3300021960\|Ga0222715_10560698	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	596	Open in IMG/M
3300023566\|Ga0228679_1004052	All Organisms → cellular organisms → Bacteria → FCB group	1361	Open in IMG/M
3300023567\|Ga0228694_123601	Not Available	640	Open in IMG/M
3300023679\|Ga0232113_1009904	All Organisms → cellular organisms → Bacteria → FCB group	973	Open in IMG/M
3300023685\|Ga0228686_1008191	All Organisms → cellular organisms → Bacteria → FCB group	1336	Open in IMG/M
3300023698\|Ga0228682_1004138	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300024223\|Ga0228601_1004152	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300024228\|Ga0228633_1038218	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1252	Open in IMG/M
3300024235\|Ga0228665_1041726	Not Available	946	Open in IMG/M
3300024247\|Ga0228675_1017610	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1758	Open in IMG/M
3300024250\|Ga0228677_1013580	All Organisms → cellular organisms → Bacteria → FCB group	1433	Open in IMG/M
(restricted) 3300024259\|Ga0233437_1154368	Not Available	1039	Open in IMG/M
(restricted) 3300024264\|Ga0233444_10266302	Not Available	754	Open in IMG/M
3300024293\|Ga0228651_1059790	Not Available	904	Open in IMG/M
(restricted) 3300024302\|Ga0233449_1130825	Not Available	840	Open in IMG/M
3300024315\|Ga0228618_1094837	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300024322\|Ga0228656_1043679	Not Available	1007	Open in IMG/M
(restricted) 3300024327\|Ga0233434_1009812	All Organisms → cellular organisms → Bacteria	6149	Open in IMG/M
3300024334\|Ga0228671_1048532	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300024334\|Ga0228671_1068391	Not Available	899	Open in IMG/M
3300024428\|Ga0233396_1106064	Not Available	668	Open in IMG/M
3300025626\|Ga0209716_1094251	Not Available	864	Open in IMG/M
3300025658\|Ga0209659_1040869	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1767	Open in IMG/M
3300025658\|Ga0209659_1136122	Not Available	754	Open in IMG/M
3300025680\|Ga0209306_1025223	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2076	Open in IMG/M
3300025688\|Ga0209140_1114639	All Organisms → cellular organisms → Bacteria → FCB group	819	Open in IMG/M
3300025694\|Ga0209406_1081392	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1131	Open in IMG/M
3300025701\|Ga0209771_1015231	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Formosa → unclassified Formosa → Formosa sp. Hel1_33_131	3391	Open in IMG/M
3300025719\|Ga0209252_1104010	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	964	Open in IMG/M
3300025719\|Ga0209252_1142912	Not Available	777	Open in IMG/M
3300025719\|Ga0209252_1146105	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	765	Open in IMG/M
3300025806\|Ga0208545_1124466	Not Available	644	Open in IMG/M
3300025809\|Ga0209199_1083431	All Organisms → Viruses → Predicted Viral	1382	Open in IMG/M
3300025809\|Ga0209199_1105983	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1145	Open in IMG/M
3300025809\|Ga0209199_1293033	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Polaribacter	509	Open in IMG/M
3300025849\|Ga0209603_1190088	All Organisms → cellular organisms → Bacteria → FCB group	795	Open in IMG/M
3300025869\|Ga0209308_10251118	Not Available	759	Open in IMG/M
3300025874\|Ga0209533_1170306	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	953	Open in IMG/M
3300025876\|Ga0209223_10059287	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2281	Open in IMG/M
3300025880\|Ga0209534_10152186	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1221	Open in IMG/M
3300026183\|Ga0209932_1018323	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1849	Open in IMG/M
3300026426\|Ga0247570_1021803	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300026460\|Ga0247604_1058959	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	916	Open in IMG/M
3300026460\|Ga0247604_1091145	Not Available	699	Open in IMG/M
3300026500\|Ga0247592_1026905	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300027188\|Ga0208921_1036214	All Organisms → cellular organisms → Bacteria → FCB group	735	Open in IMG/M
3300027190\|Ga0208674_1024032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	947	Open in IMG/M
3300027194\|Ga0208799_1024470	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	851	Open in IMG/M
3300027196\|Ga0208438_1047270	All Organisms → cellular organisms → Bacteria → FCB group	713	Open in IMG/M
3300027226\|Ga0208309_1012426	Not Available	1069	Open in IMG/M
3300027228\|Ga0208308_1033212	All Organisms → cellular organisms → Bacteria → FCB group	700	Open in IMG/M
3300027231\|Ga0208172_1017140	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Nonlabens → Nonlabens spongiae	1428	Open in IMG/M
3300027232\|Ga0208803_1035632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	974	Open in IMG/M
3300027233\|Ga0208678_1047131	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	924	Open in IMG/M
3300027251\|Ga0208809_1013486	Not Available	1572	Open in IMG/M
3300027253\|Ga0208680_1016105	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1552	Open in IMG/M
3300027315\|Ga0208949_1074395	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	596	Open in IMG/M
3300027553\|Ga0208947_1063585	Not Available	874	Open in IMG/M
3300027553\|Ga0208947_1127978	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	559	Open in IMG/M
3300027582\|Ga0208971_1080550	All Organisms → cellular organisms → Bacteria → FCB group	799	Open in IMG/M
3300027752\|Ga0209192_10011382	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	4814	Open in IMG/M
3300028131\|Ga0228642_1045860	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → Maribacter antarcticus	1197	Open in IMG/M
3300028134\|Ga0256411_1048718	All Organisms → cellular organisms → Bacteria → FCB group	1439	Open in IMG/M
3300028194\|Ga0257106_1066180	All Organisms → cellular organisms → Bacteria → FCB group	1337	Open in IMG/M
3300028284\|Ga0257120_1047440	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300028391\|Ga0233394_1021003	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1773	Open in IMG/M
3300028397\|Ga0228639_1098460	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300028416\|Ga0228614_1049946	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	897	Open in IMG/M
3300028418\|Ga0228615_1184143	Not Available	520	Open in IMG/M
3300032088\|Ga0315321_10478585	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	758	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.65%
Freshwater	Environmental → Aquatic → Freshwater	0.68%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.68%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	29.73%
Coastal	Environmental → Aquatic → Marine → Coastal	27.03%
Pelagic	Environmental → Aquatic → Marine → Pelagic	16.89%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	8.11%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.76%
Inlet	Environmental → Aquatic → Marine → Inlet	3.38%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.68%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	27.03%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	16.89%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	15.54%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.49%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.76%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	6.08%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	3.38%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.68%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.68%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	18.24%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	15.54%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	13.51%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	10.14%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.41%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.05%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	4.05%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.05%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	3.38%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.70%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	2.70%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.70%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.03%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.03%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.03%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.35%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	1.35%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.68%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.68%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.68%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.68%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.68%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.68%
Bay Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Bay Water	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000207	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 48 08/11/10 10m	Environmental	Open in IMG/M
3300000224	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10m	Environmental	Open in IMG/M
3300000225	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 120m	Environmental	Open in IMG/M
3300000254	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 100m	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300001351	Pelagic Microbial community sample from North Sea - COGITO 998_met_03	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300002154	Marine eukaryotic phytoplankton communities from the South Atlantic Ocean - 30m ANT-15 Metagenome	Environmental	Open in IMG/M
3300002186	Marine eukaryotic phytoplankton communities from the Norwegian Sea - 10m ARK-5M Metagenome	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006402	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006616	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ06 time point	Environmental	Open in IMG/M
3300006622	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ08 time point	Environmental	Open in IMG/M
3300006643	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ11 time point	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007552	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571	Environmental	Open in IMG/M
3300007553	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007715	Estuarine microbial communities from the Columbia River estuary - metaG S.751	Environmental	Open in IMG/M
3300007955	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0um	Environmental	Open in IMG/M
3300007962	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02	Environmental	Open in IMG/M
3300008921	Microbial communities of nutrient treated water from Blanes Bay, Barcelona, Spain - NB1	Environmental	Open in IMG/M
3300008961	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009050	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009592	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012516	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012524	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300016726	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011504BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016748	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011502CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020253	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX555982-ERR598945)	Environmental	Open in IMG/M
3300020431	Marine microbial communities from Tara Oceans - TARA_B100001142 (ERX556101-ERR598983)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300023566	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 18R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023567	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 80R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023679	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 32R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023685	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 50R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023698	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 27R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024223	Seawater microbial communities from Monterey Bay, California, United States - 1D	Environmental	Open in IMG/M
3300024228	Seawater microbial communities from Monterey Bay, California, United States - 41D	Environmental	Open in IMG/M
3300024235	Seawater microbial communities from Monterey Bay, California, United States - 79D	Environmental	Open in IMG/M
3300024247	Seawater microbial communities from Monterey Bay, California, United States - 36D_r	Environmental	Open in IMG/M
3300024250	Seawater microbial communities from Monterey Bay, California, United States - 58D_r	Environmental	Open in IMG/M
3300024259 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MG	Environmental	Open in IMG/M
3300024264 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MG	Environmental	Open in IMG/M
3300024291	Seawater microbial communities from Monterey Bay, California, United States - 74D	Environmental	Open in IMG/M
3300024293	Seawater microbial communities from Monterey Bay, California, United States - 63D	Environmental	Open in IMG/M
3300024302 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_200_MG	Environmental	Open in IMG/M
3300024315	Seawater microbial communities from Monterey Bay, California, United States - 20D	Environmental	Open in IMG/M
3300024322	Seawater microbial communities from Monterey Bay, California, United States - 68D	Environmental	Open in IMG/M
3300024327 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_120_MG	Environmental	Open in IMG/M
3300024334	Seawater microbial communities from Monterey Bay, California, United States - 89D	Environmental	Open in IMG/M
3300024428	Seawater microbial communities from Monterey Bay, California, United States - 32D	Environmental	Open in IMG/M
3300025626	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)	Environmental	Open in IMG/M
3300025658	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025688	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025701	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025719	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_135m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026426	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 23R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026460	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 85R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026500	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027188	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes)	Environmental	Open in IMG/M
3300027190	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733 (SPAdes)	Environmental	Open in IMG/M
3300027194	Estuarine microbial communities from the Columbia River estuary - metaG S.751 (SPAdes)	Environmental	Open in IMG/M
3300027196	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545 (SPAdes)	Environmental	Open in IMG/M
3300027226	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3 (SPAdes)	Environmental	Open in IMG/M
3300027228	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3 (SPAdes)	Environmental	Open in IMG/M
3300027231	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02 (SPAdes)	Environmental	Open in IMG/M
3300027232	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02 (SPAdes)	Environmental	Open in IMG/M
3300027233	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02 (SPAdes)	Environmental	Open in IMG/M
3300027251	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02 (SPAdes)	Environmental	Open in IMG/M
3300027253	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02 (SPAdes)	Environmental	Open in IMG/M
3300027315	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_03_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300027553	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_04_M0_20 (SPAdes)	Environmental	Open in IMG/M
3300027571	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)	Environmental	Open in IMG/M
3300027582	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_18_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300028131	Seawater microbial communities from Monterey Bay, California, United States - 53D	Environmental	Open in IMG/M
3300028134	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300028284	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_10	Environmental	Open in IMG/M
3300028391	Seawater microbial communities from Monterey Bay, California, United States - 24D	Environmental	Open in IMG/M
3300028397	Seawater microbial communities from Monterey Bay, California, United States - 50D	Environmental	Open in IMG/M
3300028416	Seawater microbial communities from Monterey Bay, California, United States - 15D	Environmental	Open in IMG/M
3300028418	Seawater microbial communities from Monterey Bay, California, United States - 16D	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048330

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100229782	3300000101	Marine	MTLVVDNSFEISNISLTPKVLIDTHYIMTLIMKE*
DelMOSum2010_101474643	3300000101	Marine	KKYNRFIVLVAFSIEISNVNFTPKDLIDSHHIITIIMKS*
DelMOSum2010_102684982	3300000101	Marine	KKYNRFIVLVAFSIEISNVNFTPKDLIDSHHIITLIMKS*
DelMOSum2011_102050032	3300000115	Marine	LKGLVVDNSIEISNISLTPRELIDTHHIMTLIMKGSGV*
SI48aug10_10mDRAFT_10040503	3300000207	Marine	VLVDNSIEISNISITARDLIDTYHLMTLILQYSDS*
SI34jun09_10mDRAFT_10406473	3300000224	Marine	VLVDNSFEISNISFIPRDLIDTHHIMTLITKSST*
SI34jun09_120mDRAFT_10439453	3300000225	Marine	NSISFIVLVDNSIEISNISFIPRDLIDTHHIMTLIMKSST*
SI34jun09_100mDRAFT_10215723	3300000254	Marine	FIVLVDNSIEISNISITARDLIDTYHLMTLILQYSDS*
OpTDRAFT_100595451	3300000928	Freshwater And Marine	RFIVLVDNSIEISNISITARDLIDTYHLMTLILQYSDS*
OpTDRAFT_101804451	3300000928	Freshwater And Marine	YNRFIVLVDNSLEISNISSTPRDLINTHHIMTLIIKS*
JGI20153J14318_100035941	3300001351	Pelagic Marine	YNRFIVLVDNSFEISNISLTPRDLIETHNLMTLIMKE*
JGI20153J14318_101733411	3300001351	Pelagic Marine	FLVDNSIEISNLSFTPRELIDTHHIMTLIVKSST*
JGI20157J14317_100428212	3300001352	Pelagic Marine	MKYNRFIVLVDNSIEISNISFTPKDLIDTHHIMSLIMKGSGI*
JGI24538J26636_101577902	3300002154	Marine	RFIVLVEFSIEISNISFTPKYLIDTHHIMTLIMKS*
JGI24539J26755_100329021	3300002186	Marine	MKTLVVDNSIEVSNISLTPKNLIDTHHIMTLIMKSST*
Ga0076924_11477561	3300005747	Marine	YKSISFIVLVDNSFEISNIGFTPKDLIDTHHIMTLIMKS*
Ga0078893_102667181	3300005837	Marine Surface Water	PSCVVDNSIEISNLSFTPRELIDTHHIMTLIMKSST*
Ga0078893_104068912	3300005837	Marine Surface Water	PSCVVDNSFEISNISFTPKDLIDTHHIMSLVMKGST*
Ga0078893_111709981	3300005837	Marine Surface Water	VVDNSLEISNISLNPRDLIDTHNIMTLILKYSDS*
Ga0070743_100765212	3300005941	Estuarine	YNRFIVLVDNSIEISNISITARDLIDTYHLMTLILQYSDS*
Ga0070743_101109862	3300005941	Estuarine	KYNRFIVLVDNLLEISNKLLTARDFLDTHDLITIILKEQP*
Ga0075511_10111631	3300006402	Aqueous	PSSFVDNSIEISNISFTPKDLFDTHHIMSLIMNE*
Ga0075511_17665182	3300006402	Aqueous	FIVLVDNSLEISNISLTPRDIIDTHHIMTLIMMC*
Ga0101440_1110921	3300006616	Marine Surface Water	TSPSCVVDNSIEISNLSFTPRELIDTHHIMTLIMKSST*
Ga0101442_1030171	3300006622	Marine Surface Water	FTSPSCEVDNFIEISNISLTTKNIIYTHYIITFIMKS*
Ga0101445_1088402	3300006643	Marine Surface Water	KLLDFSRCFFVDNSFEISNIRLTPKDLIDTHHTMILILKE*
Ga0075468_102107541	3300007229	Aqueous	MITLVVDNSIEISNISITARDLIDTYHLMTLILQYSDS*
Ga0102818_10131171	3300007552	Estuarine	YNRFIVLVDNSIEISNISITARDLIDTHNLMTLILKYSDS*
Ga0102818_10192983	3300007552	Estuarine	MKYNRFIVLVDNSLEISNISSTPRDLINTHHIMTLIMN
Ga0102819_10454013	3300007553	Estuarine	FIVLVDNSIEISNISLTPKDLIDTHHIMTLIMNE*
Ga0102871_10550742	3300007620	Estuarine	VLVDNSLEISNISFTPKDLIDAHHIMTLILKGST*
Ga0102827_11289002	3300007715	Estuarine	LVDNYIEISNISITARDLIDTHHLMTLILKYLDS*
Ga0105740_10844521	3300007955	Estuary Water	PFLVACVVDNSLEISNISFTPKDLIDAHHIMTLILKGST*
Ga0102907_10265581	3300007962	Estuarine	NRFIVLVDNSIEISNISFTPRDLIDTHNLMILIMKS*
Ga0102907_10461251	3300007962	Estuarine	NRFIVLVDNSIEISNISLTPKDIIDTHHMTLIMKS*
Ga0103486_10062263	3300008921	Bay Water	YNRFIVLVDNSIEISNINLTPRDLIDTHHIITLIMKSKKIR*
Ga0102887_10524981	3300008961	Estuarine	GYTFMKYNRFIVLVDNSLEISNISSTPRDLINTHHIMTLIIKS*
Ga0102887_11162843	3300008961	Estuarine	MKYNRFIVLVDNSLEISNISSTPRDLINTHHIMTLI
Ga0102816_10205835	3300008999	Estuarine	NRFIVLVDNSVEISNISLTPRDLIDTHHIMTLIMKS*
Ga0102909_10674301	3300009050	Estuarine	NRFIVLVDNSLEISNISSTPRDLINTHHIMTLIIKS*
Ga0102815_102389071	3300009080	Estuarine	RFIVLVDNSIEISNISFTPRELIDTHHIMTLIMKN*
Ga0114995_100214955	3300009172	Marine	LVVDNSFEISNISLTPRELIDTHNLMTLVMKGLGV*
Ga0114995_102589331	3300009172	Marine	RFIVLVDNSIEISNISFTPKDLIDTHHIMTLIMKS*
Ga0114994_103911382	3300009420	Marine	YNRFIVLVDNSIEISNIRLTPRDLIDTHHIMTLIMNE*
Ga0115548_10086876	3300009423	Pelagic Marine	SDYSLVGFSIEISNISLTPKDLIDTHHIMTLIMKS*
Ga0115548_11781581	3300009423	Pelagic Marine	NRFIVLVDNSIEISNISFTPKDLIDTHHIMSLIMKS*
Ga0114997_101511261	3300009425	Marine	RFIVLVDNSIEISNISLTPKDLIETHHIMTLIMKS*
Ga0115547_12830112	3300009426	Pelagic Marine	FIVLVDNSIEISNISLTPKDLIDTHHIMTLIMKS*
Ga0115562_10080231	3300009434	Pelagic Marine	FIVLVDNSIEISNISLTPKDLIETHHIMILIMKN*
Ga0115546_11690392	3300009435	Pelagic Marine	FIVLVDNSIEISNISLTPRDIIDTHHIMTLIMKE*
Ga0115559_10381221	3300009438	Pelagic Marine	YNRFIVLVDNSIEISNISLTPKDLIDTHYIMTLIMKS*
Ga0115559_10818361	3300009438	Pelagic Marine	MTLIVDNSMEISNISPTPRDIIDTNHLMTLIMKSKKIR
Ga0115560_11437041	3300009447	Pelagic Marine	NRFIVLVDNSIEISNISLTPKDLIDTHYIMTLIMKS*
Ga0115571_10611441	3300009495	Pelagic Marine	YNRFIVLVDNSIKISNISLTPKDLIDTHYIMTLIIKS*
Ga0115569_101814681	3300009497	Pelagic Marine	VDNSMEISNISPTPRDIIDTNHLMTLIMKSKKIR*
Ga0115564_104475951	3300009505	Pelagic Marine	YNRFIVLVDNSVEISNISLTPRDLIDTHHIMTLIMKS*
Ga0115572_100800354	3300009507	Pelagic Marine	YNRFIVLVDNSIEISNISLTPKDLIDTHHIMTLIMKS*
Ga0115003_102210861	3300009512	Marine	YNRFIVLVDNSIEISNISLTPRDLIDTHHIITLIMKS*
Ga0115101_14281333	3300009592	Marine	KNGYTFMKYNRFIVLVDNSLEISNISSTPRDLINTHHIMTLIMKS*
Ga0129325_10444432	3300012516	Aqueous	RFIVTVDNSIEISNISFIPRDLIDTHHIMTLIMKSST*
Ga0129331_11240314	3300012524	Aqueous	RFIVLVDNSIEISNISFTPKDLIDTHHIMTLIMNE*
Ga0163109_103132163	3300012936	Surface Seawater	NRFIVLVDNSLEISNISLTPRDIIDTHHIMTLIMMC*
Ga0182045_12709092	3300016726	Salt Marsh	NRFIVLVDNSLEISNISLTPRDFLNTYSLITLVSQKIK
Ga0182043_11946752	3300016748	Salt Marsh	FIVLVDNSLEISNISLTPRDFLNTYSLITLVSQKIK
Ga0182095_11038861	3300016791	Salt Marsh	YNRFIVLVDNSFEISNISLTPRDIIDTHRIMTLIMMC
Ga0181567_108754082	3300018418	Salt Marsh	FFVDNSFEISNLSFTPRELIDTHHIMTLVMKGSGV
Ga0206128_11234021	3300020166	Seawater	IVLVDNSIEISNISITARDLIDTYHLMTLILQYSDS
Ga0206128_12314862	3300020166	Seawater	LSFLKGLLVDNSIEISNLSFTPRELIDTHHIMTLIMKGSGV
Ga0206131_100343215	3300020185	Seawater	MTLVVDNSIEISNISLTPRELIYTHHIMTLIMKGSGV
Ga0206130_100433041	3300020187	Seawater	KYNRFIVLVDNSIEISNISFTPRDLIDTHHIMSLVMKS
Ga0206130_104515822	3300020187	Seawater	NRFIVLVDNSLEISNISITPRDLIDTHHIMTLIMKE
Ga0211685_10639782	3300020253	Marine	YNRFIVLVDNSFEISNISLTPRDLINTHQLMTLIMKS
Ga0211554_102340732	3300020431	Marine	IKVNRFIVLVDNSIEISNISLTPKDLIDTHHIMTLIMKN
Ga0206678_104006971	3300021084	Seawater	SRSFFVDNSVEISNISLTPRDLIDTHHIMTLIMKS
Ga0222717_102340763	3300021957	Estuarine Water	IINGLNFVDNSIEISNISLTPKDLIDTHHIMTLIMKS
Ga0222717_102459952	3300021957	Estuarine Water	FIVLVDNSIEISNIRITPRDLIDTHHIMTLILKEKL
Ga0222715_105606982	3300021960	Estuarine Water	ENFKGLLVDKSMEISNISITPRDLIDTHHIMTLIMN
Ga0228679_10040522	3300023566	Seawater	FIVLVDNSFEISNISFTPKDLIDAHHIMTLILKGST
Ga0228694_1236011	3300023567	Seawater	RFIVLVDNSLEISNISSTPRDLINTHHIMTLIIKS
Ga0232113_10099042	3300023679	Seawater	FIVLVDNSLEISNISFTPKDLIDAHHIMTLILKGST
Ga0228686_10081912	3300023685	Seawater	YNRFIVLVDNSLEISNISFTPKDLIDAHHIMTLILKGST
Ga0228682_10041381	3300023698	Seawater	RFIVLVDNSLEISNISFTPKDLIDAHHIMTLILKGST
Ga0228601_10041521	3300024223	Seawater	RFIVLVDNSFEISNISLTPKDLIDTHHIMSLIMKE
Ga0228633_10382181	3300024228	Seawater	KYNRFIVLVDNSVEISNISLTPRDLIDTHHIMTLIMKS
Ga0228665_10417261	3300024235	Seawater	YNRFIVLVENSIEISNISITARDLIDTHHLMTLILKYSDS
Ga0228675_10176101	3300024247	Seawater	NRFIVLVDNSIEISNISLTPKDLIDTHHIMTLIMKS
Ga0228677_10135801	3300024250	Seawater	LVIKIVLVDNSLEISNISFTPKDLIDAHHIMTLILKGST
(restricted) Ga0233437_11543681	3300024259	Seawater	NPGPYCLVDNSFEISNISITARDLIDTYHLMTLILQYSDS
(restricted) Ga0233444_102663021	3300024264	Seawater	RSFLVDNSIEISNISLTPRELIDTHHIMTLIMKGSGV
Ga0228660_10390342	3300024291	Seawater	SSNTDPSCVVDNSIEISNISLTPRDIIDTHHIMTLIMMC
Ga0228651_10597901	3300024293	Seawater	NRFIVLVDNSLEISNISITPRDFLNTYSLITLVSQKIK
(restricted) Ga0233449_11308252	3300024302	Seawater	GPYCLVDNSFEISNISITARDLIDTYHLMTLILQYSDS
Ga0228618_10948371	3300024315	Seawater	RFIVLVDNPIEISNISFTPKDLFDTHHIMSLIINE
Ga0228656_10436794	3300024322	Seawater	TKYKKKIVLDNSIEISNISLTPKDLIDTHHIMTLIMKS
(restricted) Ga0233434_10098129	3300024327	Seawater	DYSLVDNSFEISNIRFTPKDLIDTHHIMTLIMKSST
Ga0228671_10485322	3300024334	Seawater	NTGTSCVVDNSIEISNISFNLRDLIDTHNLMTLIMKS
Ga0228671_10683911	3300024334	Seawater	YNRFIVLVDNYFEISNISITPRDFLNTYSLITLVSQKIK
Ga0233396_11060641	3300024428	Seawater	GYTFMKYNRFIVLVDNSLEISNISSTPRDLINTHHIMTLIIKS
Ga0209716_10942512	3300025626	Pelagic Marine	RFIVLVDNSIEISNISITARDLIDTYHLMTLILQYSDS
Ga0209659_10408691	3300025658	Marine	YNRFIVLVDNSIEISNISLTPKDLIDTHHIMTLIMKS
Ga0209659_11361221	3300025658	Marine	RLFFVDNSIEISNISLTPRELIDTHHIMTLIMKGSGV
Ga0209306_10252231	3300025680	Pelagic Marine	YNRFIVLVDNSLEISNISITPKDLIDTHNLMTLVMKGSGV
Ga0209140_11146392	3300025688	Marine	FIVLVDNSIEISNLSFTPRELIDTHHIMTLIVKSST
Ga0209406_10813921	3300025694	Pelagic Marine	ISDCFFLVDNSMEISNISPTPRDIIDTNHLMTLIMKSKKIR
Ga0209771_10152316	3300025701	Marine	KKGLQMKTLVVDNSIEISNISLTPRDLIDTHHIMTLIMNE
Ga0209252_11040101	3300025719	Marine	FIVLVDNSVEISNISLTPKNLIDTHHIMTLIMKSST
Ga0209252_11429122	3300025719	Marine	FIVIVEFSIEISNISFTPKDLIDTHHIMTLIMKGSGV
Ga0209252_11461051	3300025719	Marine	RFIVIVEFSIEISNISFTPKDLIDTHHIMTLIMMC
Ga0208545_11244662	3300025806	Aqueous	MITLVVDNSIEISNISITARDLIDTYHLMTLILQYSDS
Ga0209199_10834311	3300025809	Pelagic Marine	YNRFIVLVDNSIEISNISFTPRDLIDTHHIMSLVMKS
Ga0209199_11059831	3300025809	Pelagic Marine	NRFTVLVDNSMEISNISPTPRDIIDTNHLMTLIMKSKKIR
Ga0209199_12930332	3300025809	Pelagic Marine	REWFIVPLEAVDNSIEISNISLTPKDLIDTHHIMTLIMKE
Ga0209603_11900881	3300025849	Pelagic Marine	YNRFIVLVDNSVEISNISLTPRDLIDTHHIMTLIMKS
Ga0209308_102511181	3300025869	Pelagic Marine	KYNRFNVIVDNSFKISNISFTPKDLIDTHHIMSLIMKS
Ga0209533_11703061	3300025874	Pelagic Marine	RFIVLVDNSIEISNISLTPKDIIDTHHIMTLIMKS
Ga0209223_100592873	3300025876	Pelagic Marine	YNRFIVLVDNSIEISNISLTPRDIIDTHHIMTLIMKE
Ga0209534_101521861	3300025880	Pelagic Marine	MTLVVDNSIEISNLSFTPRELIDTHHIMTLIMKGS
Ga0209932_10183231	3300026183	Pond Water	NRFIVIVDNSLEISNISITPKDLIDTHNLMTLVMKGSGV
Ga0247570_10218031	3300026426	Seawater	NRFIVLVDNSFEISNISLTPKDLIDTHHIMSLIMKE
Ga0247604_10589591	3300026460	Seawater	RFIVLVDNSLEISNISITPKDLIDTHHIMTLIMKS
Ga0247604_10911451	3300026460	Seawater	RFIVLVDNSMEISNISLTPRDLIDTHHIMTLILNE
Ga0247592_10269053	3300026500	Seawater	FKKYNRFIVLVDNSFEISNISLTLRDLIDTHHIMTLIMKE
Ga0208921_10362141	3300027188	Estuarine	IVLVDNSLEISNISFTPKDLIDAHHIMTLILKGST
Ga0208674_10240321	3300027190	Estuarine	IVLVDNSFEISNIRFTPKDLIDTHHIMTLIMKSST
Ga0208799_10244703	3300027194	Estuarine	NRFIVLVDNSLEISNISSTPRDLINTHHIMTLIIKS
Ga0208438_10472701	3300027196	Estuarine	NRFIVLVDNSVEISNISLTPRDLIDTHHIMTLIMKS
Ga0208309_10124261	3300027226	Estuarine	NRFIVLVDNSIEISNISFTPKDLIDTHHIMSLIMKGSGI
Ga0208308_10332122	3300027228	Estuarine	ISDDLLVDNSIEISNISFTPRELIDTHHIMTLIVKSST
Ga0208172_10171401	3300027231	Estuarine	KYNRFIVLVDNSFEISNISLTPRDLIDTHHIMTLIMNKLIIFIFLKMN
Ga0208803_10356323	3300027232	Estuarine	NHFIVLVDNSIEISNISLTPKDLIDTHHIMTLIMKS
Ga0208678_10471311	3300027233	Estuarine	FMKYNRFIVLVDNSLEISNISSTPRDLINTHHIMTLIIKS
Ga0208809_10134861	3300027251	Estuarine	MKYNRFIVLVDNSLEISNISSTPRDLINTHHIMTLIMNKLIIFIFLKMN
Ga0208680_10161051	3300027253	Estuarine	RFIVLVDNSFEISNISITARDLIDTYHLMTLILQYSDS
Ga0208949_10743951	3300027315	Marine	KYNRFIVLVDNSIEISNISLTPKDLIDTHHIMTLIMKS
Ga0208947_10635852	3300027553	Marine	KYNRFIAVVDKSIEISNICLTPRDFIDTHYIMTLIMKG
Ga0208947_11279782	3300027553	Marine	YNRFIVLVDNSLEISNISITPRDIIDTHHIMTLIMKS
Ga0208897_10939641	3300027571	Estuarine	SLDIEKKLRLKGLLVDNSIEISNISFTPRELIDTHHIMTLIVKSST
Ga0208971_10805502	3300027582	Marine	KYNRFIVLVDNLLEISNKLLTARDFLDTHDLITIILKEQP
Ga0209192_100113823	3300027752	Marine	MKTLVVDNSIEISNISLTPKNLIDTHHIMTLIMKSST
Ga0228642_10458601	3300028131	Seawater	MKYNRFIVLVDNSLEISNISSTPRDLINTHHIMTLIMNKLII
Ga0256411_10487181	3300028134	Seawater	KLLDFSRSFFVDNSLEISNISFTPKDLIDAHHIMTLILKGST
Ga0257106_10661802	3300028194	Marine	NRFIVLVDNSIEISNLSFTPRELIDTHHIMTLIVKSST
Ga0257120_10474404	3300028284	Marine	YNRFIVLVDNSFEISNISITPKDLIDTHHIMTLIMKS
Ga0233394_10210031	3300028391	Seawater	MKYNRFIVLVDNSLEISNISSTPRDLINTHHIMTLIMNK
Ga0228639_10984602	3300028397	Seawater	NRFIVLVDNSLEISNISLTPKDLFDTHHIMTLIMKSST
Ga0228614_10499462	3300028416	Seawater	KYNRFIVLVDNSFEISNIGFTPRDLIHTHNLMTRIMKS
Ga0228615_11841431	3300028418	Seawater	YNRFIVLVDNSLEISNISLTPKDLIDTHHIMTLIMKS
Ga0315321_104785851	3300032088	Seawater	KYNRFIVLVDNSFEISNISLTPRDLIDTHHIMTLIMNE

Hidden Markov Model


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