NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F048209

Metagenome / Metatranscriptome Family F048209

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F048209
Family Type Metagenome / Metatranscriptome
Number of Sequences 148
Average Sequence Length 60 residues
Representative Sequence MDDLSEKPCRCGETMGEVIGFQERVTDGAMVKYRVCWYCPECHATEKAIGRETHIDTN
Number of Associated Samples 99
Number of Associated Scaffolds 148

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 76.55 %
% of genes near scaffold ends (potentially truncated) 33.11 %
% of genes from short scaffolds (< 2000 bps) 66.22 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (59.459 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(33.108 % of family members)
Environment Ontology (ENVO) Unclassified
(62.838 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(66.892 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 4.65%    β-sheet: 30.23%    Coil/Unstructured: 65.12%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 148 Family Scaffolds
PF04851ResIII 8.11
PF04404ERF 6.08
PF01844HNH 3.38
PF01807zf-CHC2 2.70
PF05766NinG 2.70
PF09588YqaJ 2.70
PF01381HTH_3 2.03
PF13443HTH_26 2.03
PF00959Phage_lysozyme 1.35
PF04545Sigma70_r4 1.35
PF11134Phage_stabilise 1.35
PF11753DUF3310 0.68
PF07486Hydrolase_2 0.68
PF16510P22_portal 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 148 Family Scaffolds
COG0358DNA primase (bacterial type)Replication, recombination and repair [L] 2.70
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 0.68


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A59.46 %
All OrganismsrootAll Organisms40.54 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000124|BS_KBA_SWE12_21mDRAFT_c10009072All Organisms → Viruses → Predicted Viral3282Open in IMG/M
3300000792|BS_KBA_SWE02_21mDRAFT_10002313All Organisms → cellular organisms → Bacteria7164Open in IMG/M
3300001348|JGI20154J14316_10086713All Organisms → Viruses → Predicted Viral1064Open in IMG/M
3300004461|Ga0066223_1076110All Organisms → cellular organisms → Bacteria4261Open in IMG/M
3300004941|Ga0068514_1004733Not Available1386Open in IMG/M
3300005613|Ga0074649_1009133All Organisms → cellular organisms → Bacteria7299Open in IMG/M
3300005747|Ga0076924_1245378Not Available548Open in IMG/M
3300005913|Ga0075108_10134301Not Available891Open in IMG/M
3300005914|Ga0075117_1048127Not Available1375Open in IMG/M
3300006026|Ga0075478_10017311All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2441Open in IMG/M
3300006793|Ga0098055_1006603Not Available5485Open in IMG/M
3300006802|Ga0070749_10173338Not Available1245Open in IMG/M
3300006810|Ga0070754_10002837All Organisms → cellular organisms → Bacteria12525Open in IMG/M
3300006810|Ga0070754_10041269All Organisms → cellular organisms → Bacteria2500Open in IMG/M
3300006869|Ga0075477_10011052All Organisms → Viruses → Predicted Viral4261Open in IMG/M
3300006869|Ga0075477_10194129Not Available833Open in IMG/M
3300006916|Ga0070750_10015669All Organisms → Viruses → Predicted Viral3908Open in IMG/M
3300006919|Ga0070746_10205735Not Available935Open in IMG/M
3300006920|Ga0070748_1002472All Organisms → Viruses8572Open in IMG/M
3300006920|Ga0070748_1156176Not Available847Open in IMG/M
3300006920|Ga0070748_1204680Not Available720Open in IMG/M
3300007074|Ga0075110_1005534All Organisms → Viruses → Predicted Viral4310Open in IMG/M
3300007229|Ga0075468_10002892All Organisms → Viruses7336Open in IMG/M
3300007229|Ga0075468_10057788Not Available1302Open in IMG/M
3300007229|Ga0075468_10072130Not Available1131Open in IMG/M
3300007231|Ga0075469_10014782All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2780Open in IMG/M
3300007276|Ga0070747_1146333Not Available851Open in IMG/M
3300007276|Ga0070747_1187746Not Available732Open in IMG/M
3300007346|Ga0070753_1041934All Organisms → Viruses → Predicted Viral1916Open in IMG/M
3300007346|Ga0070753_1139570Not Available924Open in IMG/M
3300007538|Ga0099851_1049100All Organisms → Viruses → Predicted Viral1659Open in IMG/M
3300007538|Ga0099851_1128271Not Available954Open in IMG/M
3300007538|Ga0099851_1221694Not Available683Open in IMG/M
3300007540|Ga0099847_1035576All Organisms → Viruses → Predicted Viral1591Open in IMG/M
3300007540|Ga0099847_1095846Not Available906Open in IMG/M
3300007540|Ga0099847_1123787Not Available778Open in IMG/M
3300007540|Ga0099847_1124979Not Available774Open in IMG/M
3300007540|Ga0099847_1211653Not Available563Open in IMG/M
3300007542|Ga0099846_1029579All Organisms → Viruses → Predicted Viral2108Open in IMG/M
3300007542|Ga0099846_1079487Not Available1219Open in IMG/M
3300007609|Ga0102945_1008738All Organisms → Viruses → Predicted Viral2490Open in IMG/M
3300007609|Ga0102945_1022200Not Available1388Open in IMG/M
3300007609|Ga0102945_1031664All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300009001|Ga0102963_1344235Not Available585Open in IMG/M
3300009001|Ga0102963_1390583Not Available546Open in IMG/M
3300009074|Ga0115549_1095184Not Available1002Open in IMG/M
3300009074|Ga0115549_1218105Not Available607Open in IMG/M
3300009076|Ga0115550_1010219Not Available5073Open in IMG/M
3300009149|Ga0114918_10573445Not Available598Open in IMG/M
3300009172|Ga0114995_10006543All Organisms → cellular organisms → Bacteria7531Open in IMG/M
3300009438|Ga0115559_1040594Not Available2072Open in IMG/M
3300009447|Ga0115560_1112382Not Available1108Open in IMG/M
3300009449|Ga0115558_1036149All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2334Open in IMG/M
3300009495|Ga0115571_1117381Not Available1139Open in IMG/M
3300009496|Ga0115570_10304557Not Available690Open in IMG/M
3300009505|Ga0115564_10229581All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300009506|Ga0118657_12304994Not Available614Open in IMG/M
3300009509|Ga0123573_11256477Not Available690Open in IMG/M
3300009599|Ga0115103_1574562Not Available1117Open in IMG/M
3300010150|Ga0098056_1242545Not Available598Open in IMG/M
3300010316|Ga0136655_1129634Not Available756Open in IMG/M
3300010413|Ga0136851_10762493Not Available949Open in IMG/M
3300010413|Ga0136851_11381107Not Available679Open in IMG/M
3300011258|Ga0151677_1012996All Organisms → cellular organisms → Bacteria6890Open in IMG/M
3300013010|Ga0129327_10718581Not Available561Open in IMG/M
3300017697|Ga0180120_10136939All Organisms → Viruses → Predicted Viral1045Open in IMG/M
3300017697|Ga0180120_10286303Not Available662Open in IMG/M
3300017710|Ga0181403_1093879Not Available626Open in IMG/M
3300017710|Ga0181403_1122788Not Available542Open in IMG/M
3300017725|Ga0181398_1019679Not Available1684Open in IMG/M
3300017727|Ga0181401_1106030Not Available711Open in IMG/M
3300017743|Ga0181402_1008423All Organisms → cellular organisms → Bacteria3166Open in IMG/M
3300017748|Ga0181393_1010159All Organisms → cellular organisms → Bacteria2879Open in IMG/M
3300017762|Ga0181422_1000749All Organisms → cellular organisms → Bacteria10616Open in IMG/M
3300017762|Ga0181422_1010611All Organisms → cellular organisms → Bacteria3070Open in IMG/M
3300017786|Ga0181424_10233804Not Available772Open in IMG/M
3300018420|Ga0181563_10213441Not Available1169Open in IMG/M
3300019122|Ga0188839_1019368Not Available715Open in IMG/M
3300021085|Ga0206677_10000806Not Available29952Open in IMG/M
3300021085|Ga0206677_10003997All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium12196Open in IMG/M
3300021085|Ga0206677_10005186All Organisms → cellular organisms → Bacteria10354Open in IMG/M
3300021185|Ga0206682_10024554All Organisms → cellular organisms → Bacteria3723Open in IMG/M
3300021185|Ga0206682_10113062All Organisms → Viruses → Predicted Viral1327Open in IMG/M
3300021425|Ga0213866_10042104All Organisms → Viruses → Predicted Viral2620Open in IMG/M
3300021957|Ga0222717_10602470Not Available576Open in IMG/M
3300021958|Ga0222718_10331868Not Available780Open in IMG/M
3300022053|Ga0212030_1000917All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2448Open in IMG/M
3300022053|Ga0212030_1006125Not Available1378Open in IMG/M
3300022061|Ga0212023_1001061All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2592Open in IMG/M
3300022072|Ga0196889_1017257Not Available1526Open in IMG/M
3300022169|Ga0196903_1009945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → unclassified Firmicutes sensu stricto → Firmicutes bacterium CAG:552_39_191186Open in IMG/M
3300022169|Ga0196903_1028628Not Available661Open in IMG/M
3300022178|Ga0196887_1001209Not Available11368Open in IMG/M
3300022178|Ga0196887_1034549Not Available1383Open in IMG/M
3300022187|Ga0196899_1207427Not Available516Open in IMG/M
3300022821|Ga0222673_1009547Not Available1725Open in IMG/M
3300022929|Ga0255752_10275319Not Available730Open in IMG/M
(restricted) 3300023109|Ga0233432_10102393All Organisms → Viruses → Predicted Viral1607Open in IMG/M
3300024326|Ga0228652_1138530Not Available527Open in IMG/M
3300025425|Ga0208646_1004538All Organisms → Viruses → Predicted Viral4900Open in IMG/M
3300025438|Ga0208770_1003200All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium6729Open in IMG/M
3300025502|Ga0208903_1034479All Organisms → Viruses → Predicted Viral1380Open in IMG/M
3300025608|Ga0209654_1171828Not Available507Open in IMG/M
3300025610|Ga0208149_1022775All Organisms → Viruses → Predicted Viral1773Open in IMG/M
3300025617|Ga0209138_1003448Not Available11338Open in IMG/M
3300025647|Ga0208160_1019508All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2165Open in IMG/M
3300025652|Ga0208134_1044175All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1459Open in IMG/M
3300025654|Ga0209196_1183506Not Available553Open in IMG/M
3300025655|Ga0208795_1016773All Organisms → cellular organisms → Bacteria2459Open in IMG/M
3300025655|Ga0208795_1046597All Organisms → Viruses → Predicted Viral1298Open in IMG/M
3300025671|Ga0208898_1002091All Organisms → cellular organisms → Bacteria12480Open in IMG/M
3300025769|Ga0208767_1016150All Organisms → cellular organisms → Bacteria4334Open in IMG/M
3300025809|Ga0209199_1200857All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300025815|Ga0208785_1150928Not Available532Open in IMG/M
3300025874|Ga0209533_1003287All Organisms → cellular organisms → Bacteria14412Open in IMG/M
3300025879|Ga0209555_10097905Not Available1263Open in IMG/M
3300025889|Ga0208644_1125871Not Available1214Open in IMG/M
3300026097|Ga0209953_1000108All Organisms → cellular organisms → Bacteria32967Open in IMG/M
3300026097|Ga0209953_1014529All Organisms → Viruses → Predicted Viral1501Open in IMG/M
3300026097|Ga0209953_1035713All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300027752|Ga0209192_10000540Not Available36193Open in IMG/M
3300027917|Ga0209536_101546511Not Available806Open in IMG/M
3300031539|Ga0307380_10775915Not Available796Open in IMG/M
3300031539|Ga0307380_10852925Not Available745Open in IMG/M
3300031539|Ga0307380_10943439All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300031539|Ga0307380_11213522Not Available584Open in IMG/M
3300031565|Ga0307379_10547109Not Available1072Open in IMG/M
3300031565|Ga0307379_10610973Not Available997Open in IMG/M
3300031565|Ga0307379_10821308Not Available816Open in IMG/M
3300031565|Ga0307379_10868817Not Available785Open in IMG/M
3300031566|Ga0307378_10936189Not Available713Open in IMG/M
3300031578|Ga0307376_10034459All Organisms → cellular organisms → Bacteria3798Open in IMG/M
3300031578|Ga0307376_10404837Not Available896Open in IMG/M
3300031578|Ga0307376_10575352Not Available720Open in IMG/M
3300031578|Ga0307376_10797654Not Available584Open in IMG/M
3300031669|Ga0307375_10032695All Organisms → cellular organisms → Bacteria4159Open in IMG/M
3300031669|Ga0307375_10313856All Organisms → Viruses → Predicted Viral1001Open in IMG/M
3300031669|Ga0307375_10359940Not Available914Open in IMG/M
3300031669|Ga0307375_10560579All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300031673|Ga0307377_10124778All Organisms → Viruses → Predicted Viral2060Open in IMG/M
3300031673|Ga0307377_10263490Not Available1317Open in IMG/M
3300031673|Ga0307377_10295468Not Available1229Open in IMG/M
3300031673|Ga0307377_10682612Not Available724Open in IMG/M
3300031851|Ga0315320_10003165All Organisms → cellular organisms → Bacteria13532Open in IMG/M
3300033742|Ga0314858_206765Not Available503Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous33.11%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil14.19%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine7.43%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater6.08%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water5.41%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater4.05%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake4.05%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.70%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.70%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment2.70%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.03%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.35%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.35%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.35%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.35%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.68%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.68%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.68%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.68%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.68%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.68%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.68%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine0.68%
MarineEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine0.68%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment0.68%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.68%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.68%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water0.68%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.68%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.68%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000124Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21mEnvironmentalOpen in IMG/M
3300000792Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 02_21mEnvironmentalOpen in IMG/M
3300001348Pelagic Microbial community sample from North Sea - COGITO 998_met_04EnvironmentalOpen in IMG/M
3300004461Marine viral communities from Newfoundland, Canada BC-2EnvironmentalOpen in IMG/M
3300004941Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-0.2umEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300005747Seawater microbial communities from Vineyard Sound, MA, USA - control T14EnvironmentalOpen in IMG/M
3300005913Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1EnvironmentalOpen in IMG/M
3300005914Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007074Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8EnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007231Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007609Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009438Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010413Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9EnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019122Metatranscriptome of marine microbial communities from Baltic Sea - GS677_0p1EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022821Saline water microbial communities from Ace Lake, Antarctica - #801EnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300024326Seawater microbial communities from Monterey Bay, California, United States - 64DEnvironmentalOpen in IMG/M
3300025425Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8 (SPAdes)EnvironmentalOpen in IMG/M
3300025438Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9 (SPAdes)EnvironmentalOpen in IMG/M
3300025502Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ (SPAdes)EnvironmentalOpen in IMG/M
3300025608Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025617Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_153SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025654Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025809Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025874Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)EnvironmentalOpen in IMG/M
3300025879Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026097Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
BS_KBA_SWE12_21mDRAFT_1000907263300000124MarineMDDLSEKPCRCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHATEKAIGRERVIDTN*
BS_KBA_SWE02_21mDRAFT_10002313203300000792MarineMDDLSEKPCRCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHATEKAIGRER
JGI20154J14316_1008671343300001348Pelagic MarineMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIDWGK*
Ga0066223_107611093300004461MarineMDNLSEKPCLCGDTLGEVIGFQERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHDKVNLDC*
Ga0068514_100473313300004941Marine WaterMDNLSEKPCPCGDTMGEVIGFKERVTDEAMVKYRVCWYCPECHSVEKAIGRETFVETIHD
Ga0074649_1009133213300005613Saline Water And SedimentMDDLSEKPCPCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHATEKAIGRETYIDTN*
Ga0076924_124537823300005747MarineMTDLSEKPCHCGDTMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFVEIIHD
Ga0075108_1013430123300005913Saline LakeMTELSEKPCRCGDTMGEVIGFKERSTDNKLVMYRVCWYCPECHSTEKAIGRESYIEIH*
Ga0075117_104812763300005914Saline LakeTELSEKPCRCGDTMGEVIGFKERSTDNKLVMYRVCWYCPECHSTEKAIGRESYIEIH*
Ga0075478_1001731123300006026AqueousMTDLTEKPCPCGETMGEVIGFKERATDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHEKVNDNC*
Ga0098055_1006603123300006793MarineMDDLSKKPCNCGGTLGQVIGHKERSTDGVQVPWRVCWYCPDCRAVEQAIGRETYVDTMFQK*
Ga0070749_1017333843300006802AqueousMDDLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHDKVNADC*
Ga0075467_1001582713300006803AqueousMDDLSEKPCRCGETMGEVIGFNHRRTDDTYQMYRVCWYCPECHASEQAIGRERVVDTK*
Ga0070754_10002837143300006810AqueousMEDLSEKPCKCGDVMGEVIGFDERSTDGVKVPVRRRWWCHACNAVEECVGRERVVTNWPRKK*
Ga0070754_1004126963300006810AqueousMDNLSEKPCLCGETMGEVIGFQERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNLER*
Ga0075477_1001105293300006869AqueousTEKPCPCGETMGEVIGFKERATDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHEKVNDNC*
Ga0075477_1019412933300006869AqueousTEKPCPCGETMGEVIGFKERATDGAMVKYRVCWYCPECHATEKAIGRETYIDTN*
Ga0070750_1001566963300006916AqueousMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHEKVNSDC*
Ga0070746_1020573533300006919AqueousMTDLTEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFLEIIHDKVNADC*
Ga0070748_1002472133300006920AqueousMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIDWCK*
Ga0070748_115617623300006920AqueousMDDLSEKPCTCGETMGEVIGFQERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN*
Ga0070748_120468013300006920AqueousMTDLSEQPCPCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKSIGRETFVETIHD
Ga0075110_100553413300007074Saline LakeSEKPCRCGDTMGEVIGFKERSTDNKLVMYRVCWYCPECHSTEKAIGRESYIEIH*
Ga0075468_1000289213300007229AqueousKDNSMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIDWCK*
Ga0075468_1005778853300007229AqueousMTNIENIDDLREKPCRCGEVMGEVIGFKERVTDGQMVMHRVCWYCPECHATEKAIGRETFITQNG*
Ga0075468_1007213033300007229AqueousMDDLSEKPCTCGETMGEVIGFQERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHDKVNLER*
Ga0075469_1001478253300007231AqueousMDDLSEKPCRCGETMGEVIGFNHRQTDDTYQMYRVCWYCPECHATEQAIGRERVVDTK*
Ga0070747_114633323300007276AqueousMTDLTEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNSDC*
Ga0070747_118774623300007276AqueousMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCKTTEKAVGRETYIDWGK*
Ga0070753_104193463300007346AqueousLTEKPCPCGETMGEVIGFKERATDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHEKVNDNC*
Ga0070753_113957043300007346AqueousLTEKPCPCGETMGEVIGFKERATDGAMVKYRVCWYCPECHATEKAIGRETYIDTN*
Ga0099851_104910013300007538AqueousMDDLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNSDC*
Ga0099851_112827113300007538AqueousMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCSECHAVEKAIGRETFVEIIHDKVNSDC*
Ga0099851_122169413300007538AqueousGNQMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPKCHATEKAIGRETYIDTN*
Ga0099847_103557633300007540AqueousMDDLSEQPCRCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNLER*
Ga0099847_109584633300007540AqueousLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN*
Ga0099847_112378733300007540AqueousSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN*
Ga0099847_112497913300007540AqueousKDNSMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIDWGK*
Ga0099847_121165323300007540AqueousCRCGEVMGEVIGFKERVTDGQMVMHRVCWYCPECHATEKAIGRETFITQNG*
Ga0099846_102957923300007542AqueousMDDLSEQPCRCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNSDC*
Ga0099846_107948713300007542AqueousMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAMEKAIGRETFVEIINDKVNADC*
Ga0102945_100873873300007609Pond WaterMDDLSEKPCRCGETMGEVIGFQERVTDGAMVKYRVCWYCPECHATEKAIGRETHIDTN*
Ga0102945_102220043300007609Pond WaterMTDLSEKPCSCGKTMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFIETIHDKVNSDC*
Ga0102945_103166423300007609Pond WaterMDDLSEKPCKCGDTMSEVIGFQERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN*
Ga0102963_134423513300009001Pond WaterMDNLSEKPCRCGDTMGEVIGFKERVTDGEMVKYRVCWYCPECHATEKAVGRETYIDTN*
Ga0102963_139058313300009001Pond WaterMGACAYNLEIKMEDLSEKPCKCGDVMGEVIGFQERVTDGEMVKYRVCWYCTACHSVEKAIGRETF
Ga0115549_109518423300009074Pelagic MarineMDNLSEKPCRCGETMGEVIGFQERVTDGEMVRYRVCWYCPECHATEKA
Ga0115549_121810533300009074Pelagic MarineCRCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHDKVNLDC*
Ga0115550_101021933300009076Pelagic MarineMDNLSEKPCLCGDTLGEVIGLKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHDKVNLDC*
Ga0114918_1057344513300009149Deep SubsurfaceMDDLSEKPCRCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHATEKAIGRETYIDTN*
Ga0114995_10006543173300009172MarineMTNTENIDDLREKPCRCGEVMGEVIGFKERVTDNQMVMYRVCWYCPECHAIDKAIGRETFISQKG*
Ga0115559_104059433300009438Pelagic MarineMDNLSEKPCLCGETMGEVIGFQKRVTDGAMVRYRVCWYCPECHATEKAIGRERVIDTN*
Ga0115560_111238213300009447Pelagic MarineMDNLSEKPCRCGETMGEVIGFQERVTDGAMVRYRVCWYCPECHATEKAIGRERVIDTN*
Ga0115558_103614983300009449Pelagic MarineMDNLSEKPCLCGETMGEVIGFQKRVTDGAMVQYRVCWYCPECHATEKAIGRERVIDTN*
Ga0115571_111738113300009495Pelagic MarineMDNLSEKPCRCGETMGEVIGFQERVTDGAMVQYRVCWYCPECHAVEKAIGRETF
Ga0115570_1030455723300009496Pelagic MarineMGACACNLEKRMEDLSEKPCKCGDVMGEVIGFQERVTDGEMVKYRVCWYCAECHSVEKAIGRETFVETIHD*
Ga0115564_1022958113300009505Pelagic MarineCRCGEVMGEVIGFKERVTDGQMVMHRVCWYCPECHATEKAIGRETFIIQNG*
Ga0118657_1230499413300009506Mangrove SedimentEGNQMDNLSEKPCPCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFVEIIHDT*
Ga0123573_1051267513300009509Mangrove SedimentMDDLSEKPCRCGEVMGEVIGFEQRPYSEHPVRYRVGWYCPEC
Ga0123573_1125647723300009509Mangrove SedimentMDNLSEKPCPCGDTMGEVIGFKERVTDGAMVKYRVCWYCAECHSVEKAIGRETFVETIHD
Ga0115103_157456213300009599MarineMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHID
Ga0098056_124254513300010150MarineMDDLSKKPCNCGGTLGQVIGHKERSTDGVQVPWRVCWYCPDCRAVEQAIGRETYVDTMF
Ga0136655_112963433300010316Freshwater To Marine Saline GradientMDNLSVKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNSDC*
Ga0136851_1076249323300010413Mangrove SedimentMDDLSEKPCPCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKA
Ga0136851_1138110713300010413Mangrove SedimentMTSTNKQDDLTQKPCKCGDVMGEVIGFKKAESDERLVRYRVCWYCPECHATEKCIGRETVVV*
Ga0151677_101299653300011258MarineMDNLSEKPCPCGDTMGEVIGFKERVTDGAMVKYRVCWYCPECHSVEKAIGRETFVETIHD
Ga0129327_1071858113300013010Freshwater To Marine Saline GradientMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRE
Ga0180120_1013693943300017697Freshwater To Marine Saline GradientLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN
Ga0180120_1028630323300017697Freshwater To Marine Saline GradientDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNDNC
Ga0181403_109387913300017710SeawaterQERRMTDLSEKPCRCGDTMGEVIGFQERVTDGQMVKYRVCWYCPECHAVEKAIGRETFVEIIHD
Ga0181403_112278823300017710SeawaterMTNNEKQVDLREKPCRCGDTMGEVIGFKERSTDNKMVMYRVCWYCVECQAIEKAIGRETYVS
Ga0181398_101967943300017725SeawaterMTDLTEKPCRCGDTMGEVIGFKERVTDGEMVKYRVCWYCPECHAVEKAIGRETYIETIHD
Ga0181401_110603013300017727SeawaterPCRCGDTMGEVIGFKERVTDGEMVKYRVCWYCPECHAVEKAIGRETYIETIHDK
Ga0181402_100842353300017743SeawaterMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHINWGK
Ga0181393_101015943300017748SeawaterMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIHWGK
Ga0181422_1000749183300017762SeawaterMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIEWGK
Ga0181422_101061163300017762SeawaterMTNNGKQVDLREKPCRCGDTMGEVIGFKERSTDNKMVMYRVCWYCVECQAIEKAIGRETYVS
Ga0181424_1023380423300017786SeawaterMDDLSTKPCKCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRE
Ga0181563_1021344113300018420Salt MarshMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN
Ga0188839_101936813300019122Freshwater LakeMTDLSEKPCRCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN
Ga0206677_10000806183300021085SeawaterMTDTQQVDLSEKPCRCGDTMGEVIGFRERSTDKEKVMHRVCWYCAKCHATEKAIGRETYV
Ga0206677_1000399783300021085SeawaterMDNLSEKPCPCGQTMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHDKVNSDC
Ga0206677_10005186223300021085SeawaterMTDLSEKPCRCGDTMGEVIGFQERVTDGQMVKYRVCWYCPECHAVEKAIGRETFVEIIHD
Ga0206682_1002455473300021185SeawaterMTNTENIDDLREKPCRCGEVMGEVIGFKERVTDGQMVMYRVCWYCLECHAIDKAIGRETFINQNG
Ga0206682_1011306213300021185SeawaterMDDLSTKPCKCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIDWGK
Ga0213866_1004210413300021425SeawaterMEDLSTKPCKCGGTMGEIIGFVERSTDGENVPYRRLWWCQDCNA
Ga0222717_1060247013300021957Estuarine WaterMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVG
Ga0222718_1033186823300021958Estuarine WaterMDDLSEQPCRCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNSDC
Ga0212030_100091713300022053AqueousMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNSDC
Ga0212030_100612523300022053AqueousMDDLSEKPCTCGETMGEVIGFQERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN
Ga0212023_100106113300022061AqueousMDDLSEKPCRCGETMGEVIGFNHRQTDDTYQMYRVCWYCPECHATEQAIGRERVVDTK
Ga0196889_101725733300022072AqueousMTNIENIDDLREKPCRCGEVMGEVIGFKERVTDGQMVMHRVCWYCPECHATEKAIGRETFITQNG
Ga0196903_100994533300022169AqueousMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNADC
Ga0196903_102862813300022169AqueousPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN
Ga0196887_100120913300022178AqueousKDNSMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIDWCK
Ga0196887_103454923300022178AqueousMTDLTEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNSDC
Ga0196899_120742733300022187AqueousDNLSEKPCLCGETMGEVIGFQERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHDKVNLER
Ga0222673_100954723300022821Saline WaterMTDLSEKPCRCGDTMGEVIGFKERSTDNKLVMYRVCWYCPECHSTEKAIGRESYIEIH
Ga0255752_1027531913300022929Salt MarshMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKA
(restricted) Ga0233432_1010239343300023109SeawaterMDNLSEKPCRCGDTMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFVEIIHD
Ga0228652_113853023300024326SeawaterMTDLSEKPCPCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFVEIIHD
Ga0208646_1004538103300025425Saline LakeMTNDLSEKPCRCGDTMGEVIGFKERSTDNKLVMYRVCWYCPECHSTEKAIGRESYIEIH
Ga0208770_100320063300025438Saline LakeMTELSEKPCRCGDTMGEVIGFKERSTDNKLVMYRVCWYCPECHSTEKAIGRESYIEIH
Ga0208903_103447963300025502Saline LakeRMTELSEKPCRCGDTMGEVIGFKERSTDNKLVMYRVCWYCPECHSTEKAIGRESYIEIH
Ga0209654_117182813300025608MarineMTNTENIDDLREKPCRCGKVMGEVIGFKERVTDNQMVMHRVCWYCPECHATEKAIGRETFISQKG
Ga0208149_102277513300025610AqueousMTDLTEKPCPCGETMGEVIGFKERATDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHEKVNDNC
Ga0209138_1003448193300025617MarineMDNLSEKPCRCGDTMGEVIGFQERVTDGEMVKYRVCWYCPECHATEKAIGRETYIDTN
Ga0208160_101950863300025647AqueousMDNLSEKPCPCGETMGEVIGFKERVTDEAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNSDC
Ga0208134_100341813300025652AqueousMDDLSEKPCRCGETMGEVIGFNHRRTDDTYQMYRVCWYCPECHASEQAIGRERVVDTK
Ga0208134_104417533300025652AqueousMDNLSEKPCLCGETMGEVIGFQERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHDKVNLER
Ga0209196_118350613300025654Pelagic MarineMDNLSEKPCRCGETMGEVIGFQERVTDGAMVRYRVCWYCPECHATEKAIGRERVIDTN
Ga0208795_101677313300025655AqueousMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCSECHAVEKAI
Ga0208795_104659713300025655AqueousGNQMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNSDC
Ga0208898_1002091173300025671AqueousMEDLSEKPCKCGDVMGEVIGFDERSTDGVKVPVRRRWWCHACNAVEECVGRERVVTNWPRKK
Ga0208767_101615053300025769AqueousMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVETIHEKVNSDC
Ga0209199_120085713300025809Pelagic MarinePCRCGEVMGEVIGFKERVTDGQMVMHRVCWYCPECHATEKAIGRETFIIQNG
Ga0208785_115092813300025815AqueousMEDLSEKPCKCGDVMGEVIGFDERSTDGVKVPVRRRWWCHACNAVEECVGRERVVT
Ga0209533_1003287213300025874Pelagic MarineMDDLSTKPCNCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIDWGK
Ga0209555_1009790533300025879MarineMTDLSAKPCNCGGTLGEVIGHRERSTDGVQVPWRVCWYCPDCKAVEKAVGRETYIDTMFQ
Ga0208644_112587113300025889AqueousMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCSECHAVEKAIGRETFVEIIHDKVNSDC
Ga0209953_1000108143300026097Pond WaterMTDLSEKPCSCGKTMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFIETIHDKVNSDC
Ga0209953_101452963300026097Pond WaterMDDLSEKPCPCGKTMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFVEINHDKVNSDC
Ga0209953_103571323300026097Pond WaterMDDLSEKPCKCGDTMSEVIGFQERVTDGAMVKYRVCWYCPECHATEKAIGRETYIDTN
Ga0209192_10000540213300027752MarineMTNTENIDDLREKPCRCGEVMGEVIGFKERVTDNQMVMYRVCWYCPECHAIDKAIGRETFISQKG
Ga0209536_10154651123300027917Marine SedimentMDNLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAIEKAIGRETY
Ga0307380_1077591513300031539SoilMDDLSEKPCRCGETMGEVIGFQERVTDGKMVKYRVCWYCPECHATEKAIGRERVIDTN
Ga0307380_1085292523300031539SoilMTDLSEKPCPCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNLKR
Ga0307380_1094343933300031539SoilMDDLSEKPCPCGETMGEVIRLQERVTDGEMVKYRDGWYCPECHAVEKAIGRETFVEIIHDKVNAD
Ga0307380_1121352223300031539SoilMDDLSEKPCRCGDTMGEVIRFNHRCTDDTHVPYRDGWYCSECHAVEKAIGRETFVEIIHD
Ga0307379_1054710933300031565SoilMTDLSEKPCPCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNLER
Ga0307379_1061097323300031565SoilMDDLSEKPCRCGDTMGEVIRFNYRCTDDTHVPYRDGWYCSECHAVEKAIGRETFVEIIHD
Ga0307379_1082130813300031565SoilMTNTENIDDLREKPCRCGKVMGEVIGFKERVTDSQMVMHRVCWYCPECHATEKAIGRETFIIQNG
Ga0307379_1086881743300031565SoilGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNADC
Ga0307378_1093618933300031566SoilMDDLSEKPCSCGETMGEVIRFNHRCTDDTHVPYRDGWYCSECHAVEKAIGRETFVEIIHD
Ga0307376_1003445913300031578SoilMTDLSEKPCRCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFVEIIHD
Ga0307376_1040483733300031578SoilMDDLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPKCHATEKAIGRETYIDTN
Ga0307376_1057535213300031578SoilSEKPCRCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHATEKAIGRETYIDTN
Ga0307376_1079765423300031578SoilGNQMDDLSEKPCRCGETMGEVIRLQERVTDGEMVKYRDGWYCPECHAVEKAIGRETFVEIIHDKVNADC
Ga0307375_1003269553300031669SoilMDDLSEKPCRCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHATEKAIGRETYIDTN
Ga0307375_1031385633300031669SoilCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIDWGK
Ga0307375_1035994023300031669SoilMTDLSEKPCRCGETMGEVIGFQERVTDGEMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNLER
Ga0307375_1056057913300031669SoilMDDLSEKPCPCGETMGEVIRLQERVTDGEMVKYRDGWYCLECHAVEKAIGRETFVEIIHDKVNADC
Ga0307377_1012477813300031673SoilMDDLSEKPCPCGETMGEVIGFKERVTDGAMVKYRVCWYCPECHAVEKAIGRETFVEIIHDKVNLER
Ga0307377_1026349023300031673SoilMDDLSEKPCRCGETMGEVIGFQERVTDGKMVKYRGCWYCPECHAVEKAIGRETFVEIIHDKVNLER
Ga0307377_1029546843300031673SoilMDDLSEKPCPCGETMGEVIGFQERVTDGEMVQYRVCWYCLECHAVEKAIGREKFVEIIHGKVNLER
Ga0307377_1068261213300031673SoilMTDLSEKPCPCGETMGEVIGFQERVTDGAMVQYRVCWYCPECHATEKAIGRERVIDTN
Ga0315320_10003165103300031851SeawaterMDDLSTRPCKCGGTLGEVIGFQERSTDGVQVPYRVCWWCQDCDTTEKAVGRETHIDWGK
Ga0314858_206765_2_1633300033742Sea-Ice BrinePCRCGDTMGEVIRFNRRCTDDTHVPYRDGWYCPECHAVEKAIGRETFVEIIHN


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.