Metagenome / Metatranscriptome Family F048202

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048202
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	48 residues
Representative Sequence	MPFKSPPPKKGQLRRITLKFKSDMTRKQMATFRKSVRALAKRFKATISK
Number of Associated Samples	117
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.73 %
% of genes near scaffold ends (potentially truncated)	33.11 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.622 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand (11.486 % of family members)
Environment Ontology (ENVO)	Unclassified (29.054 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.946 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.77% β-sheet: 0.00% Coil/Unstructured: 66.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF13374	TPR_10	10.14
PF02655	ATP-grasp_3	7.43
PF13424	TPR_12	4.73
PF13535	ATP-grasp_4	4.05
PF13191	AAA_16	3.38
PF13432	TPR_16	2.03
PF07719	TPR_2	2.03
PF00515	TPR_1	1.35
PF06026	Rib_5-P_isom_A	1.35
PF07721	TPR_4	1.35
PF13176	TPR_7	1.35
PF00496	SBP_bac_5	0.68
PF14492	EFG_III	0.68
PF00903	Glyoxalase	0.68
PF02771	Acyl-CoA_dh_N	0.68
PF02954	HTH_8	0.68
PF00342	PGI	0.68
PF13529	Peptidase_C39_2	0.68
PF13181	TPR_8	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	1.35
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.68
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.62 %
Unclassified	root	N/A	3.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.62 %
Unclassified	root	N/A	3.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.62 %
Unclassified	root	N/A	3.38 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	68.92 %
Unclassified	root	N/A	3.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	68.92 %
Unclassified	root	N/A	3.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	68.92 %
Unclassified	root	N/A	3.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	45.95 %
Unclassified	root	N/A	3.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	45.95 %
Unclassified	root	N/A	3.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_6983_length_1432_cov_8.205307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1464	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2362084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2049	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101870690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2559	Open in IMG/M
3300002560\|JGI25383J37093_10127866	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300002561\|JGI25384J37096_10030413	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300002908\|JGI25382J43887_10004229	All Organisms → cellular organisms → Bacteria	6677	Open in IMG/M
3300002908\|JGI25382J43887_10167161	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1097	Open in IMG/M
3300003659\|JGI25404J52841_10105250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300004267\|Ga0066396_10001039	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2346	Open in IMG/M
3300004267\|Ga0066396_10026947	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	814	Open in IMG/M
3300004281\|Ga0066397_10030628	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	870	Open in IMG/M
3300004633\|Ga0066395_10001398	All Organisms → cellular organisms → Bacteria	8578	Open in IMG/M
3300005167\|Ga0066672_10007972	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4892	Open in IMG/M
3300005180\|Ga0066685_10027256	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3503	Open in IMG/M
3300005180\|Ga0066685_10099909	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300005180\|Ga0066685_10916344	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005186\|Ga0066676_10070349	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2050	Open in IMG/M
3300005289\|Ga0065704_10508233	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005332\|Ga0066388_100023225	All Organisms → cellular organisms → Bacteria	5535	Open in IMG/M
3300005332\|Ga0066388_100299163	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2254	Open in IMG/M
3300005353\|Ga0070669_100748138	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	828	Open in IMG/M
3300005363\|Ga0008090_15081227	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300005444\|Ga0070694_101075493	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005447\|Ga0066689_10290777	Not Available	1012	Open in IMG/M
3300005450\|Ga0066682_10844603	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	550	Open in IMG/M
3300005467\|Ga0070706_100341414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1396	Open in IMG/M
3300005560\|Ga0066670_10611725	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005564\|Ga0070664_100406657	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300005713\|Ga0066905_100183429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1546	Open in IMG/M
3300005764\|Ga0066903_100585631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1927	Open in IMG/M
3300005764\|Ga0066903_105357257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300006049\|Ga0075417_10004715	All Organisms → cellular organisms → Bacteria	4546	Open in IMG/M
3300006049\|Ga0075417_10008234	All Organisms → cellular organisms → Bacteria	3738	Open in IMG/M
3300006794\|Ga0066658_10248489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	950	Open in IMG/M
3300006844\|Ga0075428_101417000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	729	Open in IMG/M
3300006854\|Ga0075425_100110818	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3129	Open in IMG/M
3300006854\|Ga0075425_100291206	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300006871\|Ga0075434_100170985	All Organisms → cellular organisms → Bacteria	2193	Open in IMG/M
3300006903\|Ga0075426_11129250	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300006904\|Ga0075424_100276986	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300007255\|Ga0099791_10112011	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1261	Open in IMG/M
3300009137\|Ga0066709_100000709	All Organisms → cellular organisms → Bacteria	19282	Open in IMG/M
3300009137\|Ga0066709_100034291	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5455	Open in IMG/M
3300009147\|Ga0114129_10131260	All Organisms → cellular organisms → Bacteria	3440	Open in IMG/M
3300009147\|Ga0114129_13062256	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300009162\|Ga0075423_10213862	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2021	Open in IMG/M
3300009168\|Ga0105104_10485699	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300009792\|Ga0126374_11749881	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300009795\|Ga0105059_1041472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300009808\|Ga0105071_1051478	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300009812\|Ga0105067_1022028	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300009813\|Ga0105057_1012311	Not Available	1180	Open in IMG/M
3300009813\|Ga0105057_1071088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	604	Open in IMG/M
3300009818\|Ga0105072_1041718	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	864	Open in IMG/M
3300009820\|Ga0105085_1115855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300009821\|Ga0105064_1075511	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300009836\|Ga0105068_1098732	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010043\|Ga0126380_10741376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	795	Open in IMG/M
3300010043\|Ga0126380_11503627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	596	Open in IMG/M
3300010046\|Ga0126384_10468332	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1080	Open in IMG/M
3300010046\|Ga0126384_11745969	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	589	Open in IMG/M
3300010047\|Ga0126382_11218827	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	675	Open in IMG/M
3300010336\|Ga0134071_10088784	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1456	Open in IMG/M
3300010358\|Ga0126370_12109896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300010359\|Ga0126376_10144462	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1896	Open in IMG/M
3300010359\|Ga0126376_12259050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300010360\|Ga0126372_10025223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3609	Open in IMG/M
3300010362\|Ga0126377_10467495	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1287	Open in IMG/M
3300010376\|Ga0126381_104502921	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300010400\|Ga0134122_13043635	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300010401\|Ga0134121_10108533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2334	Open in IMG/M
3300010863\|Ga0124850_1013284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2620	Open in IMG/M
3300010863\|Ga0124850_1069648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1072	Open in IMG/M
3300010868\|Ga0124844_1006941	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2444	Open in IMG/M
3300012202\|Ga0137363_11505421	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	564	Open in IMG/M
3300012203\|Ga0137399_10849735	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300012205\|Ga0137362_10124351	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2189	Open in IMG/M
3300012207\|Ga0137381_10351239	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300012361\|Ga0137360_10398070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1160	Open in IMG/M
3300012685\|Ga0137397_10011942	All Organisms → cellular organisms → Bacteria	6071	Open in IMG/M
3300012685\|Ga0137397_11042447	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300012922\|Ga0137394_10000627	All Organisms → cellular organisms → Bacteria	24557	Open in IMG/M
3300012923\|Ga0137359_11577748	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	544	Open in IMG/M
3300012975\|Ga0134110_10417191	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	598	Open in IMG/M
3300012976\|Ga0134076_10602223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300014150\|Ga0134081_10097017	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	925	Open in IMG/M
3300015374\|Ga0132255_100012138	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	10168	Open in IMG/M
3300016270\|Ga0182036_11809311	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300016422\|Ga0182039_11053374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300018431\|Ga0066655_10099308	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1628	Open in IMG/M
3300018431\|Ga0066655_10574470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	756	Open in IMG/M
3300018468\|Ga0066662_10056178	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2543	Open in IMG/M
3300018468\|Ga0066662_11409397	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	721	Open in IMG/M
3300025917\|Ga0207660_11548991	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300025923\|Ga0207681_10723725	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	828	Open in IMG/M
3300025937\|Ga0207669_10807475	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	778	Open in IMG/M
3300025945\|Ga0207679_10296305	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300026089\|Ga0207648_10458000	Not Available	1162	Open in IMG/M
3300026277\|Ga0209350_1059837	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1091	Open in IMG/M
3300026296\|Ga0209235_1018539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3753	Open in IMG/M
3300026297\|Ga0209237_1001687	All Organisms → cellular organisms → Bacteria	13093	Open in IMG/M
3300026297\|Ga0209237_1125528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1067	Open in IMG/M
3300026313\|Ga0209761_1080869	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1685	Open in IMG/M
3300026331\|Ga0209267_1103424	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1210	Open in IMG/M
3300026524\|Ga0209690_1204825	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300026536\|Ga0209058_1071263	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1862	Open in IMG/M
3300026540\|Ga0209376_1266797	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300027032\|Ga0209877_1028686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300027068\|Ga0209898_1007561	Not Available	1292	Open in IMG/M
3300027324\|Ga0209845_1075207	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	523	Open in IMG/M
3300027384\|Ga0209854_1010293	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1444	Open in IMG/M
3300027511\|Ga0209843_1037235	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300027527\|Ga0209684_1005281	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2143	Open in IMG/M
3300027561\|Ga0209887_1021340	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1553	Open in IMG/M
3300027646\|Ga0209466_1000357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	9994	Open in IMG/M
3300027655\|Ga0209388_1115519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	767	Open in IMG/M
3300027743\|Ga0209593_10303552	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300027821\|Ga0209811_10094288	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1070	Open in IMG/M
3300027873\|Ga0209814_10000112	All Organisms → cellular organisms → Bacteria	21617	Open in IMG/M
3300027873\|Ga0209814_10000794	All Organisms → cellular organisms → Bacteria	10774	Open in IMG/M
3300027874\|Ga0209465_10120042	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1296	Open in IMG/M
3300027947\|Ga0209868_1016890	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300027957\|Ga0209857_1073601	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300028536\|Ga0137415_10107838	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2634	Open in IMG/M
3300031170\|Ga0307498_10178520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	726	Open in IMG/M
3300031543\|Ga0318516_10088921	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1732	Open in IMG/M
3300031680\|Ga0318574_10529448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M
3300031720\|Ga0307469_10090515	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2110	Open in IMG/M
3300031720\|Ga0307469_11009026	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	777	Open in IMG/M
3300031720\|Ga0307469_11103912	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300031720\|Ga0307469_11205599	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	715	Open in IMG/M
3300031720\|Ga0307469_11796213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300031740\|Ga0307468_100155059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1478	Open in IMG/M
3300031740\|Ga0307468_100511177	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	955	Open in IMG/M
3300031740\|Ga0307468_101869703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	571	Open in IMG/M
3300031751\|Ga0318494_10207958	Not Available	1116	Open in IMG/M
3300031779\|Ga0318566_10183003	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1040	Open in IMG/M
3300031940\|Ga0310901_10439217	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300031944\|Ga0310884_10581985	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	666	Open in IMG/M
3300032066\|Ga0318514_10736734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300032180\|Ga0307471_100024909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4482	Open in IMG/M
3300032180\|Ga0307471_100351032	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1585	Open in IMG/M
3300032180\|Ga0307471_100361219	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1566	Open in IMG/M
3300032180\|Ga0307471_100470463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1400	Open in IMG/M
3300032180\|Ga0307471_101635446	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	799	Open in IMG/M
3300032180\|Ga0307471_103886647	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300032205\|Ga0307472_101236521	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	715	Open in IMG/M
3300033433\|Ga0326726_11982495	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.14%
Host-Associated	Host-Associated	14.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.78%
Plants	Host-Associated → Plants	14.86%
Aquatic	Environmental → Aquatic	1.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.70%
Freshwater	Environmental → Aquatic → Freshwater	1.35%
Peat	Environmental → Terrestrial → Peat	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.46%
Loam	Environmental → Terrestrial → Soil → Loam	12.16%
Sand	Environmental → Terrestrial → Soil → Sand	11.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.86%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	11.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.03%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.35%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	11.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027032	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)	Environmental	Open in IMG/M
3300027068	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027947	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_03738940	2140918013	Soil	MPFKSPPPKKGQVRRIALKFKNDMTRKQMAAFRKSVRALAKRFKATLAR
ICChiseqgaiiDRAFT_23620843	3300000033	Soil	MPFKSPPPKKGQXXXIXLKFKNDMTRKQMASFRKSVRSLAKRFKATISX*
INPhiseqgaiiFebDRAFT_1018706902	3300000364	Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQMASFKKSVRALAKRFKATLGR*
JGI25383J37093_101278662	3300002560	Grasslands Soil	MPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKKGVRVLAKRFKATISK*
JGI25384J37096_100304131	3300002561	Grasslands Soil	MPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKRGVRVLAKRFKATISK*
JGI25382J43887_100042293	3300002908	Grasslands Soil	MPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKXGVRVLAKRFKATISK*
JGI25382J43887_101671614	3300002908	Grasslands Soil	MPFKSPPPKKGQLRRVTLKFKSDMTRKQMASFRKSVRALAKRFKATISK*
JGI25404J52841_101052501	3300003659	Tabebuia Heterophylla Rhizosphere	MPFKSPPPKKGQLRRITLKFRTDMTRKQMATFRKTVRALAKRFKATISK*
Ga0066396_100010393	3300004267	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQLASFKKSVRALAKRFKATLGR*
Ga0066396_100269471	3300004267	Tropical Forest Soil	MPFKSPPKRGQSRKITLKFRTDLTRKQMSSFKKSVRALAKRFKATLGR*
Ga0066397_100306283	3300004281	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQMSSFKKSVRALAKRFKATIGR*
Ga0066395_100013983	3300004633	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTRKQMSSFKKSVRALAKRFKATLGR*
Ga0066672_100079721	3300005167	Soil	MPFKSPPPKKGQLRRITLKFKSDMTRKQMATFRKSVRALAKRFKATISK*
Ga0066685_100272563	3300005180	Soil	MPFKSPPKKGQSRKITVKFRTDLTRKQLASFKKSVRALAKRFKATIGR*
Ga0066685_100999091	3300005180	Soil	MPFKSPPPKKGHTRRIALKFRSNMTPKQFARFKKGVRVLAKRFKATISK*
Ga0066685_109163442	3300005180	Soil	MPFKSPPPKKGQLRRITLKFKSDMTRKQMATFRRSVRALAKRFKATISK*
Ga0066676_100703491	3300005186	Soil	KKGQLRRVTLKFKSDMTRKQMASFRKSVRALAKRFKATISK*
Ga0065704_105082332	3300005289	Switchgrass Rhizosphere	MPFKSPPPKKGQVRRIALKFKNDMTRKQMAAFRKSVRALAKRFKATLAR*
Ga0066388_1000232253	3300005332	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRSDLTKKQLASFKKSVRSLAKRFKATVGK*
Ga0066388_1002991631	3300005332	Tropical Forest Soil	MPFKSPPPKKGQLRRITLKFKNDMTRKQMASFKKSVRSLAKRFKATISK*
Ga0070669_1007481383	3300005353	Switchgrass Rhizosphere	MPFKSPPPKKGQLRRITLKFKTDLTRKQMANFRKSVRSLAKRFKASISR*
Ga0008090_150812271	3300005363	Tropical Rainforest Soil	MPFKSPPKKGQSRKITLKFRSDLTKKQLASFKKSVRSLAKRFKATVSK*
Ga0070694_1010754932	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPFKSPPPKKGQLRRITLKFKNDMTRKQMASFRKSVRSLAKRFKATISK*
Ga0066689_102907771	3300005447	Soil	MRFPKPDDTNHGGTLMPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKKGVR
Ga0066682_108446032	3300005450	Soil	MPFKSPPKKGQSRKITLKFRSELTRKQMASFKKSVRALAKRFKATLSK*
Ga0070706_1003414141	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SPKPDKRKRRTLMPFKSPPPKKGQLRRVTLKFKSDMTRKQMASFRKSVRALAKRFKATISK*
Ga0066670_106117251	3300005560	Soil	MPFKSPPPKKGQLRRVTLKFKSDMTRKQMASFRKS
Ga0070664_1004066573	3300005564	Corn Rhizosphere	MPFKSPPPKKGQLRKITLKFKSDMTPKKMAQFRKSVRALAKRFKASISR*
Ga0066905_1001834293	3300005713	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFKSDLTKKQLASFKKSVRSLAKRFKATLSK*
Ga0066903_1005856313	3300005764	Tropical Forest Soil	MPFKSPPPKKGQLRKITLKFKNDMTPKQMAQFKKSVRALAKRFKASISR*
Ga0066903_1053572572	3300005764	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRSDLTKKQLASFKKSVRSLAKRFKATISK*
Ga0075417_100047153	3300006049	Populus Rhizosphere	MPFKSPPPKKGQLRRITLKFRTDMTRKQMATFRKSVRALAKRFKATISK*
Ga0075417_100082343	3300006049	Populus Rhizosphere	MPFKSPPPKKGQLRRITLKFKNDLTRKQMASFRKSVRSLAKRFKATISK*
Ga0066658_102484892	3300006794	Soil	PKKGQSRKITLKFRSDLTRKQLASFRKSVRSLAKRFKATVGK*
Ga0075428_1014170001	3300006844	Populus Rhizosphere	PTTPREERSMPFKSPPPKKGQVRRIALKFKNDMTRKQMAAFRKSVRALAKRFKATLAR*
Ga0075425_1001108183	3300006854	Populus Rhizosphere	MPFKSPPKKGQSRKITLKFRSDLTKKQMASFKKSVRALAKRFKATLGR*
Ga0075425_1002912063	3300006854	Populus Rhizosphere	MPFKSPPPKKGQSRKITLKFKTDMTPKKMALFRKSVRALAKRFKASISR*
Ga0075434_1001709853	3300006871	Populus Rhizosphere	MPFKSPPPKKGQSRKITLKFKTDMTPKKMALFRKSVRALAKRFRASISR*
Ga0075426_111292502	3300006903	Populus Rhizosphere	MPFKSPPPKKGQLRRVTLKFKSDMTRKQMASFRKSVRALARRFKAAISK*
Ga0075424_1002769861	3300006904	Populus Rhizosphere	MPFKSPPPKKGQSRKITLKFKTDMTPKKMALFRKGVRALAKRFKASISR*
Ga0099791_101120112	3300007255	Vadose Zone Soil	MPFKSPPKKGQSRKITLKFRTELTRKQMANFKKSVRALAKRFKATIAK*
Ga0066709_10000070910	3300009137	Grasslands Soil	MRFPKPDDTNHGGTLMPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKKGVRVLAKRFKATISK*
Ga0066709_1000342914	3300009137	Grasslands Soil	MPFKSLPPKKGQLRRITLKFKSDMTRKQMATFRKSVRALAKRFKATISK*
Ga0114129_101312604	3300009147	Populus Rhizosphere	MPFKSPPPKKGQVRRIALKFKNDMTRKQMAAFRKSVRTLAKRFKATLAR*
Ga0114129_130622561	3300009147	Populus Rhizosphere	MPFKSPPKKGQSRKITLKFRSELTRKQMASFKKSVRALAKRFK
Ga0075423_102138623	3300009162	Populus Rhizosphere	RRVTLKFKSDMTRKQMASFRKSVRSLAKRFKATISK*
Ga0105104_104856992	3300009168	Freshwater Sediment	MPFKSPPPKKGQSRKITLKFRSDLTKKQMANFKKSVRSLAKRFKATISK*
Ga0126374_117498811	3300009792	Tropical Forest Soil	VKPVNPGGAHMPFKSPPKKGQSRKITLKFRTDLTKKQLASFKKSVRALAKRFKATLGR*
Ga0105059_10414722	3300009795	Groundwater Sand	MPFKMPPPKKNQKRRMLLTFRSDMTPKQFARFKKSVRALAKRFKLKVTK*
Ga0105071_10514782	3300009808	Groundwater Sand	MPFKSPPPKKNQKRRMVLKFRTDMTPKQFARFKKSVRALAK
Ga0105067_10220281	3300009812	Groundwater Sand	MPFKSPPPKKNQKRRLVLKFRSDLTSKQFARFKKSVRALAKRFKLTVSK*
Ga0105057_10123112	3300009813	Groundwater Sand	MPFKSPPPKKNQKRRLVLKFRSDLTSKQFARFKKSVRALAKRFKLT
Ga0105057_10710881	3300009813	Groundwater Sand	PRPEPTRRNAMPFKSPPPKRNQKRRMVFKFRSDLTPKQFARFKKSVRALAKRFKLAVTK*
Ga0105072_10417182	3300009818	Groundwater Sand	MPFKSPPPKKNQKRRMVLKFRSDMTPKQFARFKKSVRALAKRFKLTVTK*
Ga0105085_11158552	3300009820	Groundwater Sand	MPFKSPPPKKNQKRRMVLKFRTDMTPKQFARFKKSVRALAKRFKLTVTK*
Ga0105064_10755112	3300009821	Groundwater Sand	MPFKSPPPKKNQKRRMVLKFRTDMTPKQFARFKKSVRALAKRFKLAVTK*
Ga0105068_10987322	3300009836	Groundwater Sand	MPFKMPPPKKNQKRRMVLTFRSDMTPKQFARFKKSVRALAKRFKLKVTK*
Ga0126380_107413763	3300010043	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQMSSFKKSVRALAKRFKATLGR*
Ga0126380_115036273	3300010043	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRSDLTKKQLATFKKSVRSLAKRFKATVSK*
Ga0126384_104683322	3300010046	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQLASFKKSVRALAKRFKATLGK*
Ga0126384_117459693	3300010046	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQLATFKKSVRALAKRFKATLGK*
Ga0126382_112188271	3300010047	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQLASFKKSVRSLAKRFK
Ga0134071_100887842	3300010336	Grasslands Soil	MTFKSPPPKKGHTRRIALKFRSDMTPKQFARFKKGVRVLAKRFKATISK*
Ga0126370_121098962	3300010358	Tropical Forest Soil	MPFKSPPPKKGQLRKITLKFKNDMTPKQMAQFRKSVRALAKRFKASISR*
Ga0126376_101444621	3300010359	Tropical Forest Soil	SRKITLKFRSDLSKKQLASFKKSVRSFAKRFKATVSK*
Ga0126376_122590502	3300010359	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRSDLTKKQLASFKKSVRSLAKRFKATVGSKD*
Ga0126372_100252231	3300010360	Tropical Forest Soil	KGQSRKITLKFRSDLTKKQLASFKKSVRSLAKRFKATVGK*
Ga0126377_104674952	3300010362	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRSDLTKKQLASFKKSVRSLAKRFKATLSK*
Ga0126381_1045029211	3300010376	Tropical Forest Soil	GQLRKITLKFKNDMTPKQMAQFKKSVRALAKRFKASISR*
Ga0134122_130436351	3300010400	Terrestrial Soil	NFLNPNTHRGAHMPFKSPPPKKGQLRRITLKFKTDLTRKQMANFRKSVRSLAKRFKASISR*
Ga0134121_101085332	3300010401	Terrestrial Soil	MPFKSPPPKRGQLRKITLKFKSDMTPKKMAQFRKSVRALAKRFKASISR*
Ga0124850_10132843	3300010863	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRSDLTKKQLASFKKSVRSL
Ga0124850_10696481	3300010863	Tropical Forest Soil	KKGQSRKITLKFRCDLTKKQLASFKKSVRSLAKRFKATVGK*
Ga0124844_10069413	3300010868	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRSDLTKKQLASFKKSVRSLAK
Ga0137363_115054211	3300012202	Vadose Zone Soil	VTLKFKSDMTRKQMASFRKSVRALAKRFKATISK*
Ga0137399_108497351	3300012203	Vadose Zone Soil	MPFKSPPPKKGQLRRITLKFKNDMTRKQMATFRKSVRALAKRFKATISR*
Ga0137362_101243513	3300012205	Vadose Zone Soil	MPFKSPPPKKGQLRRITLKFKSDLTRKQMATFRKSVRALAKRFKATISK*
Ga0137381_103512393	3300012207	Vadose Zone Soil	MPFKSPPPKKGQLRRITLKFKTDMTRKQMANFRKGVRSLAKRFKASISR*
Ga0137360_103980702	3300012361	Vadose Zone Soil	MPFKSPPPKKGQLRRITLKFKSDLTRKQMATFRKSVRALAKRFKATISR*
Ga0137397_100119429	3300012685	Vadose Zone Soil	MPFKSPPPRKGQLRRIVLKFKSDMTRKQHASFKKSVRALAKRFKAFVSK*
Ga0137397_110424472	3300012685	Vadose Zone Soil	MPFKSPPKKGQSRKITLKFRSELTRKQMASFKKSVRSLAKRFKATLGK*
Ga0137394_1000062718	3300012922	Vadose Zone Soil	MPFKSPPPKKGQLRRIVLKFKSDMTRKQHASFKKSVRALAKRFKAFVSK*
Ga0137359_115777483	3300012923	Vadose Zone Soil	KGQLRRITLKFKSDMTRKQMATFRKSVRALAKRFKARSSR*
Ga0134110_104171913	3300012975	Grasslands Soil	PKKGQLRRVTLKFKSDMTRKQMASFRKSVRALAKRFKATISK*
Ga0134076_106022232	3300012976	Grasslands Soil	MRFPKPDDTNHGGTLMPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKRGVRVLAKRFKATISK*
Ga0134081_100970172	3300014150	Grasslands Soil	MPFKSPPPKKGQLRRVTLKFKSDMTHKQMASFRKSVRALAKRFKATISK*
Ga0132255_1000121386	3300015374	Arabidopsis Rhizosphere	MPFKSPPPKKGQLRKITLKFKSDMTPKKMAQFRKSVRALAKRYKASISR*
Ga0182036_118093112	3300016270	Soil	MPCKSPPPKKGQLRKITLKFKNDMTPKQMAQFRKSVRALAKRFKASISR
Ga0182039_110533742	3300016422	Soil	MPFKSPPPKKGQLRKITLKFKNDMTPKQMAQFRKSVRALAK
Ga0066655_100993083	3300018431	Grasslands Soil	MPFKSPPKKGQSRKITVKFRTDLTRKQLASFKKSVRALAKRFKATIGR
Ga0066655_105744701	3300018431	Grasslands Soil	MPFKSPPPKKGQLRRITLKFKSDMTRKQMATFRKSVRALAKRFKATISK
Ga0066662_100561782	3300018468	Grasslands Soil	MPFKSPPPKKGQLRRVTLKFKSDMTRKQMASFRKSVRALAKRFKATISK
Ga0066662_114093971	3300018468	Grasslands Soil	KPHDTHHGGTLMPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKRGVRVLAKRFKATISK
Ga0207660_115489912	3300025917	Corn Rhizosphere	MPFKSPPPKKGQLRRITLKFKNDMTRKQMASFRKSVRSLAKRFKATISK
Ga0207681_107237253	3300025923	Switchgrass Rhizosphere	MPFKSPPPKKGQLRRITLKFKTDLTRKQMANFRKSVRSLAKRFKASISR
Ga0207669_108074752	3300025937	Miscanthus Rhizosphere	MPFKSPPPKKGQLRRITLKFKTDLTRKQMANFRKSVRSLAKRFKA
Ga0207679_102963052	3300025945	Corn Rhizosphere	MPFKSPPPKKGQLRKITLKFKSDMTPKKMAQFRKSVRALAKRFKASISR
Ga0207648_104580002	3300026089	Miscanthus Rhizosphere	MPFKSPPPKKGQLRRITLKFKTDLTRKQMANFRKS
Ga0209350_10598371	3300026277	Grasslands Soil	KRKRRTLMPFKSPPPKKGQLRRVTLKFKSDMTRKQMASFRKSVRALAKRFKATISK
Ga0209235_10185393	3300026296	Grasslands Soil	MPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKKGVRVLAKRFKATISK
Ga0209237_100168714	3300026297	Grasslands Soil	MPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKRGVRVLAKRFKATISK
Ga0209237_11255283	3300026297	Grasslands Soil	GQLRRVTLKFKSDMTRKQMASFRKSVRALAKRFKATISK
Ga0209761_10808693	3300026313	Grasslands Soil	FPKPHDTHHGGTLMPFKSPPPKKGHTRRIALKFRSDMTPKQFARFKRGVRVLAKRFKATISK
Ga0209267_11034242	3300026331	Soil	MPFKSPPKKGQSRKITLKFRSDLTRKQLASFRKSVRSLAKRFKATVGK
Ga0209690_12048251	3300026524	Soil	RIDSPKPDKRKRRTLMPFKSPPPKKGQLRRVTLKFKSDMTRKQMASFRKSVRALAKRFKATISK
Ga0209058_10712632	3300026536	Soil	MPFKSPPKKGQSRKITLKFRSDLTRKQLASFRKSVRSLAKRFKATISK
Ga0209376_12667972	3300026540	Soil	MPFKSPPPKKGQLRRITLKFKSDMTRKQMATFRKSVRALA
Ga0209877_10286862	3300027032	Groundwater Sand	MPFKMPPPKKNQKRRMLLTFRSDMTPKQFARFKKSVRALAKRFKLKVTK
Ga0209898_10075611	3300027068	Groundwater Sand	MPFKSPPPKKNQKRRLVLKFRSDLTSKQFARFKKSVRALAKRFKLTVSK
Ga0209845_10752072	3300027324	Groundwater Sand	MPFKSPPPKKNQKRRMVLKFRTDMTPKQFARFKKSVRALAKRFKLAVTK
Ga0209854_10102933	3300027384	Groundwater Sand	MPFKMPPPKKNQKRRMLLTFRSDMTPKQFARFKKSV
Ga0209843_10372352	3300027511	Groundwater Sand	MPFKSPPPKKNQKRRMVLKFRTDMTPKQFARFKKSVRALAKRFKLKVTK
Ga0209684_10052812	3300027527	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQLASFKKSVRALAKRFKATLGR
Ga0209887_10213402	3300027561	Groundwater Sand	MPFKSPPPKKNQKRRMVLKFRSDMTPKQFARFKKSVRALAKRFKLTVTK
Ga0209466_10003574	3300027646	Tropical Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQMSSFKKSVRALAKRFKATIGR
Ga0209388_11155193	3300027655	Vadose Zone Soil	MPFKSPPKKGQSRKITLKFRTELTRKQMASFKKSVRALAKRFKATLSK
Ga0209593_103035522	3300027743	Freshwater Sediment	MPFKSPPPKKGQSRKITLKFRSDLTKKQMANFKKSVRSLAKRFKATISK
Ga0209811_100942882	3300027821	Surface Soil	MPFKSPPPKKGQLRRITLKFKTDMTRKQMANFRKSVRSLAKRFKASISR
Ga0209814_100001123	3300027873	Populus Rhizosphere	MPFKSPPPKKGQLRRITLKFRTDMTRKQMATFRKSVRALAKRFKATISK
Ga0209814_100007943	3300027873	Populus Rhizosphere	MPFKSPPPKKGQLRRITLKFKNDLTRKQMASFRKSVRSLAKRFKATISK
Ga0209465_101200422	3300027874	Tropical Forest Soil	MPFKSPPPKKGQLRKITLKFKNDMTPKQMAQFKKSVRALAKRFKASISR
Ga0209868_10168902	3300027947	Groundwater Sand	MPFKSPPPKKNQKRRMLLTFRSDMTPKQFARFKKSVRALAKRFKLKVTK
Ga0209857_10736011	3300027957	Groundwater Sand	MPFKMPPPKKNQKRRMLLTFRSDMTPKQFARFKKSVRALAKRFKL
Ga0137415_101078382	3300028536	Vadose Zone Soil	MPFKSPPPKKGQLRRITLKFKNDMTRKQMATFRKSVRALAKRFKATISR
Ga0307498_101785203	3300031170	Soil	RGAHMPFKSPPPKKGQLRRITLKFKTDMTRKQMANFRKSVRSLAKRFKASISR
Ga0318516_100889213	3300031543	Soil	MPFKSPPPKKGQLRKITLKFKNDMTPKQMAQFRKSVRALAKRFKASISR
Ga0318574_105294482	3300031680	Soil	MPFKSPPPKKGQLRKISLKFKNDMTPKQMAQFRKSVRALAKRFKASISR
Ga0307469_100905153	3300031720	Hardwood Forest Soil	MPFKSPPPKKGQLRRITLKFKTDMTRKQMASFRKSVRSLAKRFKASISR
Ga0307469_110090263	3300031720	Hardwood Forest Soil	MPFKTPPKKGQSRKITLKFRSELTRKQMASFKKSVRALAKRFKATISK
Ga0307469_111039121	3300031720	Hardwood Forest Soil	MPFKSPPKKGQSRKITLKFRSELTRKQHASFKKSVRALAKRFKA
Ga0307469_112055993	3300031720	Hardwood Forest Soil	QGGTHMPFKSPPKKGQSRKITLKFRSELTRKQHASFKKSVRALAKRFKATISK
Ga0307469_117962132	3300031720	Hardwood Forest Soil	MPFKSPPKKGQSRKITLKFRTDLTKKQMASFKKSVRALAKRFKATLGR
Ga0307468_1001550592	3300031740	Hardwood Forest Soil	MPFKSPPKKGQSRKITLKFRTELTRKQMASFKKSVRSLAKRFKATIAR
Ga0307468_1005111772	3300031740	Hardwood Forest Soil	MPFKSPPKKGQSRKITLKFRSELTRKQHASFKKSVRALAKRFKATISK
Ga0307468_1018697033	3300031740	Hardwood Forest Soil	PKLDTLERRTLMPFKSLPPKKGQLRRITLKFKSDMTRKQMATFRKSVRALAKRFKATISK
Ga0318494_102079581	3300031751	Soil	MPFKSPPPKKGQLRKITLKFKNDMTPKQMAQFRKSVRALAKRFKAS
Ga0318566_101830031	3300031779	Soil	RMPFKSPPPKKGQLRKITLKFKNDMTPKQMAQFRKSVRALAKRFKASISR
Ga0310901_104392171	3300031940	Soil	HETHTDQGGECMPFKSPPPKKGQLRRITLKFKNDMTRKQMASFRKSVRSLAKRFKATISK
Ga0310884_105819851	3300031944	Soil	TDQGGECMPFKSPPPKKGQLRRITLKFKNDMTRKQMASFRKSVRSLAKRFKATISK
Ga0318514_107367341	3300032066	Soil	MPFKSPPPKKGQLRKITLKFKNDMTPKQMAQFRKSVRA
Ga0307471_1000249093	3300032180	Hardwood Forest Soil	MPFKSPPKKGQSRKITLKFRTELTRKQMASFKKSVRALAKRFKATISK
Ga0307471_1003510321	3300032180	Hardwood Forest Soil	MPFKSPPPKKGQLRRITLKFKTDMTRKQMASFRKSVRSLAKRFK
Ga0307471_1003612193	3300032180	Hardwood Forest Soil	LRRITLKFKTDMTRKQMASFRKSVRSLAKRFKASISR
Ga0307471_1004704633	3300032180	Hardwood Forest Soil	MPFKSPPPKKGQLRRITLKFKNDLTRKQMAQFRKSVRSLAKRFKASISR
Ga0307471_1016354462	3300032180	Hardwood Forest Soil	MPFKTPPKKGQSRKITLKFRSELTRKQMASFKKSVRALAKRFKATLSK
Ga0307471_1038866473	3300032180	Hardwood Forest Soil	KKGQLRRVTLKFKSDMTRKQMASFRKSVRALAKRFKATISK
Ga0307472_1012365212	3300032205	Hardwood Forest Soil	MPFKTPPKKGQSRKITLKFRSELTRKQHASFKKSVRALAKRFKATISK
Ga0326726_119824952	3300033433	Peat Soil	MPFKSPPPKKGQLRRITLKFKNDMTRKHMALFRKSVRSLAKRFKASISR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048202

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences