Metagenome / Metatranscriptome Family F047982

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047982
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	58 residues
Representative Sequence	MAENVEFRVMPSGDGRWYWEVITPGPTVIARGVADSEPAACKAASDAARKAKLIE
Number of Associated Samples	89
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.55 %
% of genes near scaffold ends (potentially truncated)	27.52 %
% of genes from short scaffolds (< 2000 bps)	84.56 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.376 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (24.832 % of family members)
Environment Ontology (ENVO)	Unclassified (40.268 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.470 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.87% β-sheet: 25.30% Coil/Unstructured: 57.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
c.55.3.15: Ribonuclease H-like	d2bgga3	2bgg	0.75
c.55.3.15: Ribonuclease H-like	d2bgga3	2bgg	0.75
c.55.4.1: Translational machinery components	d1vq8n1	1vq8	0.73
c.55.4.1: Translational machinery components	d1vq8n1	1vq8	0.73
c.55.1.0: Actin-like ATPase domain	d2w40a1	2w40	0.72
c.55.1.0: Actin-like ATPase domain	d2w40a1	2w40	0.72
c.55.4.1: Translational machinery components	d1fjgk_	1fjg	0.71
c.55.4.1: Translational machinery components	d1fjgk_	1fjg	0.71
c.55.7.1: Methylated DNA-protein cysteine methyltransferase domain	d1mgta2	1mgt	0.7
c.55.7.1: Methylated DNA-protein cysteine methyltransferase domain	d1mgta2	1mgt	0.7

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF04392	ABC_sub_bind	1.34
PF00239	Resolvase	1.34
PF03466	LysR_substrate	1.34
PF13185	GAF_2	1.34
PF00072	Response_reg	1.34
PF02566	OsmC	0.67
PF03061	4HBT	0.67
PF00067	p450	0.67
PF13223	DUF4031	0.67
PF00580	UvrD-helicase	0.67
PF00154	RecA	0.67
PF00753	Lactamase_B	0.67
PF07690	MFS_1	0.67
PF02823	ATP-synt_DE_N	0.67
PF14247	DUF4344	0.67
PF07366	SnoaL	0.67
PF04317	DUF463	0.67
PF13628	DUF4142	0.67
PF00011	HSP20	0.67
PF04134	DCC1-like	0.67
PF01402	RHH_1	0.67
PF10129	OpgC_C	0.67
PF03480	DctP	0.67
PF05598	DUF772	0.67
PF03705	CheR_N	0.67
PF01979	Amidohydro_1	0.67
PF00534	Glycos_transf_1	0.67
PF04120	Iron_permease	0.67
PF00293	NUDIX	0.67
PF04748	Polysacc_deac_2	0.67
PF03401	TctC	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.34
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.34
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.34
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.34
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.67
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.67
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.67
COG3106	Ras-like GTP-binding stress-induced protein YcjX, DUF463 family	Signal transduction mechanisms [T]	0.67
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.67
COG2861	Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family	Carbohydrate transport and metabolism [G]	0.67
COG2124	Cytochrome P450	Defense mechanisms [V]	0.67
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.67
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.67
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.67
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.67
COG0355	FoF1-type ATP synthase, epsilon subunit	Energy production and conversion [C]	0.67
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
All Organisms	root	All Organisms	43.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
cellular organisms	root	All Organisms → cellular organisms	43.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.34 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.20 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.34 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.34 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.40 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.34 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.34 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.67 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.67 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.68 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.01 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.34 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.34 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.34 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.67 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.67 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.38 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.01 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.01 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.34 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.34 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.34 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.67 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.67 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.38 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.01 %
Anoxybacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Anoxybacillus	1.34 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.34 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.34 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.67 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.67 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.67 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.38 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.01 %
Anoxybacillus kamchatkensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Anoxybacillus → Anoxybacillus kamchatkensis	1.34 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.34 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.34 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	0.67 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.67 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.67 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.67 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101650737	Not Available	3448	Open in IMG/M
3300000550\|F24TB_10269511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3069	Open in IMG/M
3300001431\|F14TB_101480899	Not Available	1284	Open in IMG/M
3300002568\|C688J35102_120950848	All Organisms → cellular organisms → Bacteria → Proteobacteria	2896	Open in IMG/M
3300004152\|Ga0062386_100198304	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300004479\|Ga0062595_100025290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2338	Open in IMG/M
3300004479\|Ga0062595_100598269	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300005177\|Ga0066690_10482641	Not Available	836	Open in IMG/M
3300005332\|Ga0066388_100024461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	5441	Open in IMG/M
3300005332\|Ga0066388_100058190	All Organisms → cellular organisms → Bacteria	4061	Open in IMG/M
3300005332\|Ga0066388_100946950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1433	Open in IMG/M
3300005332\|Ga0066388_101547614	Not Available	1163	Open in IMG/M
3300005332\|Ga0066388_101596209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1148	Open in IMG/M
3300005332\|Ga0066388_101668574	Not Available	1126	Open in IMG/M
3300005332\|Ga0066388_103273357	Not Available	828	Open in IMG/M
3300005332\|Ga0066388_104621402	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300005332\|Ga0066388_104902117	Not Available	680	Open in IMG/M
3300005332\|Ga0066388_105245006	Not Available	657	Open in IMG/M
3300005332\|Ga0066388_105504225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Anoxybacillus → Anoxybacillus kamchatkensis	641	Open in IMG/M
3300005332\|Ga0066388_105571378	Not Available	638	Open in IMG/M
3300005332\|Ga0066388_106786366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300005332\|Ga0066388_108222015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300005363\|Ga0008090_10039782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1019	Open in IMG/M
3300005454\|Ga0066687_10935205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Anoxybacillus → Anoxybacillus kamchatkensis	517	Open in IMG/M
3300005587\|Ga0066654_10100992	Not Available	1393	Open in IMG/M
3300005713\|Ga0066905_100415479	Not Available	1095	Open in IMG/M
3300005713\|Ga0066905_101431720	Not Available	627	Open in IMG/M
3300005713\|Ga0066905_101839517	Not Available	559	Open in IMG/M
3300005764\|Ga0066903_100094535	All Organisms → cellular organisms → Bacteria → Proteobacteria	3996	Open in IMG/M
3300005764\|Ga0066903_100295052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2558	Open in IMG/M
3300005764\|Ga0066903_100306690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2519	Open in IMG/M
3300005764\|Ga0066903_101032085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	1507	Open in IMG/M
3300005764\|Ga0066903_101128495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1448	Open in IMG/M
3300005764\|Ga0066903_101520699	Not Available	1265	Open in IMG/M
3300005764\|Ga0066903_104408320	Not Available	752	Open in IMG/M
3300005764\|Ga0066903_104743724	Not Available	723	Open in IMG/M
3300005764\|Ga0066903_104755061	Not Available	722	Open in IMG/M
3300005764\|Ga0066903_105211589	Not Available	688	Open in IMG/M
3300005764\|Ga0066903_105344503	Not Available	678	Open in IMG/M
3300005764\|Ga0066903_106761256	Not Available	596	Open in IMG/M
3300005764\|Ga0066903_107412216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300005764\|Ga0066903_107435036	Not Available	566	Open in IMG/M
3300005764\|Ga0066903_108389455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300005764\|Ga0066903_108421234	Not Available	526	Open in IMG/M
3300005937\|Ga0081455_10496771	Not Available	820	Open in IMG/M
3300005937\|Ga0081455_10498048	Not Available	819	Open in IMG/M
3300006028\|Ga0070717_10189478	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300006034\|Ga0066656_10589775	Not Available	720	Open in IMG/M
3300006800\|Ga0066660_10016564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4185	Open in IMG/M
3300006844\|Ga0075428_100425140	All Organisms → cellular organisms → Bacteria → Proteobacteria	1423	Open in IMG/M
3300006847\|Ga0075431_100116379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2759	Open in IMG/M
3300009012\|Ga0066710_101532790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1026	Open in IMG/M
3300009094\|Ga0111539_11542033	Not Available	770	Open in IMG/M
3300009100\|Ga0075418_10490732	Not Available	1318	Open in IMG/M
3300009156\|Ga0111538_12328973	Not Available	672	Open in IMG/M
3300009792\|Ga0126374_10002379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5890	Open in IMG/M
3300009792\|Ga0126374_11284294	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300010046\|Ga0126384_10478244	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300010046\|Ga0126384_11538489	Not Available	624	Open in IMG/M
3300010046\|Ga0126384_11686696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300010046\|Ga0126384_12087176	Not Available	543	Open in IMG/M
3300010047\|Ga0126382_10270356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1258	Open in IMG/M
3300010048\|Ga0126373_12337433	Not Available	595	Open in IMG/M
3300010154\|Ga0127503_10352116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	684	Open in IMG/M
3300010358\|Ga0126370_10757486	Not Available	860	Open in IMG/M
3300010360\|Ga0126372_11970442	Not Available	630	Open in IMG/M
3300010362\|Ga0126377_13189984	Not Available	530	Open in IMG/M
3300010366\|Ga0126379_12895389	Not Available	574	Open in IMG/M
3300010366\|Ga0126379_13010708	Not Available	564	Open in IMG/M
3300010398\|Ga0126383_10392408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1422	Open in IMG/M
3300010398\|Ga0126383_12475282	Not Available	604	Open in IMG/M
3300012198\|Ga0137364_11451273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	506	Open in IMG/M
3300012199\|Ga0137383_10052645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2912	Open in IMG/M
3300012199\|Ga0137383_10343252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1093	Open in IMG/M
3300012199\|Ga0137383_10963972	Not Available	622	Open in IMG/M
3300012201\|Ga0137365_10157488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1704	Open in IMG/M
3300012204\|Ga0137374_10351539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1188	Open in IMG/M
3300012212\|Ga0150985_101525075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1352	Open in IMG/M
3300012212\|Ga0150985_120047414	All Organisms → cellular organisms → Bacteria → Proteobacteria	990	Open in IMG/M
3300012350\|Ga0137372_10022623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5860	Open in IMG/M
3300012353\|Ga0137367_10419392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	948	Open in IMG/M
3300012353\|Ga0137367_10446683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300012354\|Ga0137366_10131625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1886	Open in IMG/M
3300012359\|Ga0137385_10757546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	808	Open in IMG/M
3300012929\|Ga0137404_10073273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2695	Open in IMG/M
3300012938\|Ga0162651_100061591	Not Available	606	Open in IMG/M
3300012948\|Ga0126375_10377371	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300012948\|Ga0126375_12054354	Not Available	506	Open in IMG/M
3300012971\|Ga0126369_10220884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1843	Open in IMG/M
3300012971\|Ga0126369_10503853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1269	Open in IMG/M
3300012971\|Ga0126369_13694395	Not Available	501	Open in IMG/M
3300015371\|Ga0132258_12464080	Not Available	1302	Open in IMG/M
3300016294\|Ga0182041_10641984	Not Available	936	Open in IMG/M
3300016294\|Ga0182041_11628059	Not Available	596	Open in IMG/M
3300016319\|Ga0182033_11129052	Not Available	701	Open in IMG/M
3300016319\|Ga0182033_11912262	Not Available	539	Open in IMG/M
3300016319\|Ga0182033_12019719	Not Available	525	Open in IMG/M
3300016341\|Ga0182035_10302889	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1311	Open in IMG/M
3300016357\|Ga0182032_10887467	Not Available	757	Open in IMG/M
3300016404\|Ga0182037_12122656	Not Available	505	Open in IMG/M
3300016445\|Ga0182038_10517375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1020	Open in IMG/M
3300018431\|Ga0066655_10827406	Not Available	630	Open in IMG/M
3300018431\|Ga0066655_11107575	Not Available	554	Open in IMG/M
3300020580\|Ga0210403_10425710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1083	Open in IMG/M
3300021560\|Ga0126371_10699701	Not Available	1161	Open in IMG/M
3300025939\|Ga0207665_10978441	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300026312\|Ga0209153_1254358	Not Available	565	Open in IMG/M
3300026330\|Ga0209473_1231776	Not Available	659	Open in IMG/M
3300026550\|Ga0209474_10631284	Not Available	550	Open in IMG/M
3300026552\|Ga0209577_10183966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1618	Open in IMG/M
3300026876\|Ga0207837_1013036	Not Available	710	Open in IMG/M
3300027063\|Ga0207762_1061224	Not Available	545	Open in IMG/M
3300027527\|Ga0209684_1016800	Not Available	1137	Open in IMG/M
3300027680\|Ga0207826_1113966	Not Available	742	Open in IMG/M
3300027909\|Ga0209382_11330674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300031058\|Ga0308189_10541901	Not Available	507	Open in IMG/M
3300031545\|Ga0318541_10023171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2996	Open in IMG/M
3300031545\|Ga0318541_10192011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1129	Open in IMG/M
3300031561\|Ga0318528_10668449	Not Available	556	Open in IMG/M
3300031573\|Ga0310915_10028098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3486	Open in IMG/M
3300031681\|Ga0318572_10240807	Not Available	1063	Open in IMG/M
3300031719\|Ga0306917_10035230	All Organisms → cellular organisms → Bacteria → Proteobacteria	3260	Open in IMG/M
3300031719\|Ga0306917_11174983	Not Available	596	Open in IMG/M
3300031724\|Ga0318500_10214366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	926	Open in IMG/M
3300031744\|Ga0306918_10238730	Not Available	1383	Open in IMG/M
3300031744\|Ga0306918_10768529	Not Available	753	Open in IMG/M
3300031747\|Ga0318502_10281078	Not Available	976	Open in IMG/M
3300031768\|Ga0318509_10095572	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300031771\|Ga0318546_11161605	Not Available	542	Open in IMG/M
3300031880\|Ga0318544_10373737	Not Available	554	Open in IMG/M
3300031890\|Ga0306925_11551812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	646	Open in IMG/M
3300031897\|Ga0318520_10810805	Not Available	587	Open in IMG/M
3300031912\|Ga0306921_12525037	Not Available	533	Open in IMG/M
3300031912\|Ga0306921_12628397	Not Available	519	Open in IMG/M
3300031942\|Ga0310916_11668105	Not Available	516	Open in IMG/M
3300031954\|Ga0306926_10019228	All Organisms → cellular organisms → Bacteria → Proteobacteria	7815	Open in IMG/M
3300031954\|Ga0306926_12464349	Not Available	572	Open in IMG/M
3300032001\|Ga0306922_11907162	Not Available	582	Open in IMG/M
3300032063\|Ga0318504_10591425	Not Available	533	Open in IMG/M
3300032261\|Ga0306920_100526101	Not Available	1754	Open in IMG/M
3300032261\|Ga0306920_101599405	Not Available	927	Open in IMG/M
3300032261\|Ga0306920_104395826	Not Available	505	Open in IMG/M
3300033289\|Ga0310914_10912573	Not Available	778	Open in IMG/M
3300033289\|Ga0310914_10987257	Not Available	742	Open in IMG/M
3300033290\|Ga0318519_10629065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.95%
Host-Associated	Host-Associated	8.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.93%
Plants	Host-Associated → Plants	8.05%
Aquatic	Environmental → Aquatic	2.01%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.03%
Freshwater	Environmental → Aquatic → Freshwater	2.01%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.07%
Loam	Environmental → Terrestrial → Soil → Loam	28.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.34%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.67%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	24.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.01%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.67%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.67%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	24.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.01%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.01%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.01%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.34%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026876	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015762162	3300000364	Soil	MPSTGNVEFRVMPSGDDHWYWEVISAKDVVARGVTDSEPEACKAANDAAREAHLID*
INPhiseqgaiiFebDRAFT_1016507372	3300000364	Soil	MSAIVLRGRAMGSTEKNVEFRVMPSGDGRWYWEVITDSNTVIARGVADAEPAACKEAGDAARKAKLIE*
F24TB_102695113	3300000550	Soil	MDTVQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQAGDAAREAHLIE*
F14TB_1014808991	3300001431	Soil	MAQSDVEFRVMPSGDGRWRWEVILDRTVIKRGTAETEPAACRQASEAAREAKLID*
C688J35102_1209508484	3300002568	Soil	MDNQQQNNVEFRIMPSGDGAWYWEVITQRTTIVSRGVADTQPAASSQASDAARKAELIR*
Ga0062386_1001983041	3300004152	Bog Forest Soil	MANRQSDGVEFRVMPSGNGQWYWELIANANTVLKRGISDTEPGARREAAEAARKAKLIGL
Ga0062595_1000252904	3300004479	Soil	MSSGDGRWYWEVISDKDVIARGLADTEPDACKAASDAACEANLIE*
Ga0062595_1005982692	3300004479	Soil	MGSTEKNVEFRIMPSGDGRWYWEVITDSNTVIARGVADTEPTACKEASEAARKAKLIE*
Ga0066690_104826411	3300005177	Soil	MGTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQAGEAAREAHLIE*
Ga0066388_1000244615	3300005332	Tropical Forest Soil	MGSLSGTDGSIEFRIMPSGDGRWYWEVIRGGRNIVTRGVADTEPAACQDASDAARKANLIQ*
Ga0066388_1000581906	3300005332	Tropical Forest Soil	MSDVNTVDPSVEFRVMPSGDGGWYWEVIRGANNVVARGVADAEPAACQEASNAARKAKLIP*
Ga0066388_1009469503	3300005332	Tropical Forest Soil	MSAGDVQRNIEFRVMPNGNGRWYWEVITDGRIVMMRGVADSEPIACQEAGDAARKAKLIK
Ga0066388_1015476143	3300005332	Tropical Forest Soil	MSESGAPASIEFRIMPSGNGRWYWEVIVGRRVIKRGVADDEPNACQDASDAARDANLIH*
Ga0066388_1015962091	3300005332	Tropical Forest Soil	VNSTEPGVEFRIMPSGGRDSRWYWEVIIGSRTVVTRGVADTEPEACREASDAARKAKLIQ
Ga0066388_1016685742	3300005332	Tropical Forest Soil	VGNTPGVEFRIMPNGERDSRWYWEVIIGGRTVVTRGVADTEPAACQEASAAARTAKLINNTSA*
Ga0066388_1032733571	3300005332	Tropical Forest Soil	GARMAENVEFRLMPIADGRWYWEVITPGLAVIARGVADTKPAASRKAREAARTAKLIQNPTE*
Ga0066388_1046214022	3300005332	Tropical Forest Soil	MNDVNTVDPSVEFRVMPSGDGGWYWEVIRGPKNVVARGVADAEPAACQDASNAARKAKLIP*
Ga0066388_1049021171	3300005332	Tropical Forest Soil	CRVMPIADGRWYWEVITSGPTVIARGVADTKRAASREASEAARIAKLNPTE*
Ga0066388_1052450061	3300005332	Tropical Forest Soil	MNRSIESSPTNTEFRIMPNGEGAWYWEVITDHNQVMARGVANTEPEACKQAGDVARRARLIK*
Ga0066388_1055042251	3300005332	Tropical Forest Soil	MAENVEFRVMPSGDGRWYWEVITPGPTVIARGVAEAEPVACREASEAARKAKLIE*
Ga0066388_1055713782	3300005332	Tropical Forest Soil	MSKPQEDVEFRIMPSGDGRWYWEVLTHRNEVVCRGVADTEPVACEQASEAARKAKLIE*
Ga0066388_1067863661	3300005332	Tropical Forest Soil	MTSASTEASVEFRIMPSGYGGWYWEVVRDGNNVLVRGVADDEPTACQEASDAARKAKLIR
Ga0066388_1082220151	3300005332	Tropical Forest Soil	IRRVAVSNTEPGVEFRIMPSGGRDSRWYWEVIIRGRTVVTRGLADTEPEACQEASNAARKAKLIA*
Ga0008090_100397823	3300005363	Tropical Rainforest Soil	LGGCAMAENVEFRVMPSGDGRWYWEVITPGPTVIARGVADAEPVACREASEAARKAKLIE
Ga0066687_109352051	3300005454	Soil	MAENVEFRVMPSGDGRWYWEVITPGPTVIARGVADAEPVACREASEAARKAKLIE*
Ga0066654_101009922	3300005587	Soil	VSSNTVGDNTDRAVEFRIMPSGNGRWYWEVITGGRRVITRGLADTEPAACQEAGDAARAANLIQ*
Ga0066905_1004154792	3300005713	Tropical Forest Soil	MAEAAGVEFRVMPSGNDDGRWYWEVIVGRTVVKRGVADNEPAACHQASEAAREAKLIK*
Ga0066905_1014317202	3300005713	Tropical Forest Soil	MAENVEFRVMPSGDGHWYWEVIVSHSGPAVIARGMADSEPAACKEASEAARKAKLID*
Ga0066905_1018395171	3300005713	Tropical Forest Soil	VGSTAPGIEFRIMPNGERDSRWYWEVIIGGRTIVTRGVADTEPAACQEASAAARTAKLIQ
Ga0066903_1000945356	3300005764	Tropical Forest Soil	MAESVEFRVMQSGDGGWYWEVITPGPTVIARGVADSEAAACKEASEAARKASLIQ*
Ga0066903_1002950523	3300005764	Tropical Forest Soil	MSSAGLETSIEFRIMPSGNGRWYWEVITGGGKVVIRGVADNEPAACQEASDAARKAKLIQ
Ga0066903_1003066904	3300005764	Tropical Forest Soil	MPKPQENVEFRIMPSGDGRWYWEVLTQRNEVVSRGVAETEPAACEQASEAARQAKLIK*
Ga0066903_1010320855	3300005764	Tropical Forest Soil	MTSASTEARVEFRIMPSGYGGWYWEVVRDGNNVIVRGVADDEPSACQEASDAARKAKLIR
Ga0066903_1011284953	3300005764	Tropical Forest Soil	MGSLSGTDRSIEFRIMPSGDGRWYWEVIRGGRNIVTRGVADTEPAACQDASDAARRANLIQ*
Ga0066903_1015206992	3300005764	Tropical Forest Soil	VGNTEPSVEFRIMPNGGRHRLWYWEVIVDGRKVVMRGVADTEPAACQEASDAARKAKLIQ
Ga0066903_1044083203	3300005764	Tropical Forest Soil	RRTAVGNTAPGIEFRIMPNGERDSRWYWEVIIGGRTVVRRGVADTEPAACQEASAAARAAQLIQ*
Ga0066903_1047437241	3300005764	Tropical Forest Soil	VGNTAPGIEFRIMPNGERDNRWYWEVIIEGRTVVRRGVADTEPAACQEASAAAR
Ga0066903_1047550612	3300005764	Tropical Forest Soil	MAENVDCRVMPVADGRWYWEVITPGPTVIARGVADTKRAASREASEAARIAKLNPTE*
Ga0066903_1052115891	3300005764	Tropical Forest Soil	MAESLEFRVMPSGDGRWYWEVIVSRSGPAVIARGVADSEPAACKEASEAARKAQLID*
Ga0066903_1053445032	3300005764	Tropical Forest Soil	VSNTDPGVEFRIMPSGGHDSRWYWEVIIRGRTVVTRGLADTEPEACQEASNAARKAKLIA
Ga0066903_1067612561	3300005764	Tropical Forest Soil	MSNASGAFDKDVEFRIMPNGDGRWYWEVIQGGRAVITRGVADNEPSACQEASDAARKQNLIQ*
Ga0066903_1074122162	3300005764	Tropical Forest Soil	VRTTEPAVVFRIMPSGGRDSRWYWEVTTGRTVVRRGLAETEPEACQEASDAARKAKLIR*
Ga0066903_1074350362	3300005764	Tropical Forest Soil	QVMDNINNSVELRIMPSGDGHWYWEVITQGRNIVTRGLSDTEPSACKDAADAARKAKLLQ
Ga0066903_1083894552	3300005764	Tropical Forest Soil	IKGGVALMNLAGARMAENVELRVMPSGNGSWYWEVITPGPTVIARGVADTEPAACEQAGEAARKARLIEERS*
Ga0066903_1084212341	3300005764	Tropical Forest Soil	MTENVEFRVMPSGDGRWYWEVIVSHSGPVVIARGVTDSEPAACKEASEAARKAKLID*
Ga0081455_104967712	3300005937	Tabebuia Heterophylla Rhizosphere	MTSMSGLEDSVEFRIMPSGDGHWYWEVIRGHDVIMRGVADTEPKACEEASDAARKAKLIK
Ga0081455_104980482	3300005937	Tabebuia Heterophylla Rhizosphere	MSGDIKAQACVEFRIMPSGDGRWYWEVILDGRTVVSRGVSDTEPAACQDASAAAREDKLIP*
Ga0070717_101894783	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAENVEFRVMPSGDGRWYWEVITPGPTVMARGVADSEPAACKAASDAARKVKLID*
Ga0066656_105897751	3300006034	Soil	MGTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQASEAAREAHLIE*
Ga0066660_100165641	3300006800	Soil	VSSNTVGDNTDRAVEFRIMPSGNGRWYWEVITGGRRVITRGLADTEPAACQEAGDAARAA
Ga0075428_1004251403	3300006844	Populus Rhizosphere	MDTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACKQASDAAREAHLIE*
Ga0075431_1001163791	3300006847	Populus Rhizosphere	MDTAQPDVEFRVMPSGHGRRYWEVITQRNSVIKRGIADTEPAACKQASDAAREAHLIE*
Ga0066710_1015327901	3300009012	Grasslands Soil	MGTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQAGEAARE
Ga0111539_115420332	3300009094	Populus Rhizosphere	MTTAVKNQMDIEFRVMPNGDGRWYWEVLKDTQNVMMRGIADTEPAACQAAGDAARKAKLIK*
Ga0075418_104907322	3300009100	Populus Rhizosphere	MTTAVRNQVNVEFRVMPNGNGRWYWEVIRDSRDVIMRGVADTEPAACKEAGDAAREAKLIK*
Ga0111538_123289731	3300009156	Populus Rhizosphere	MTTTVKNQMDIEFRVMPNGDGRWYWEVLKDTQNVMMRGIADTEPAACQAASEAARKAKLIK*
Ga0126374_100023795	3300009792	Tropical Forest Soil	MAENVEFRVMPSGNGHWYWEVIVSHSGPAVIARGMADSEPAACKEASEAARKAKLID*
Ga0126374_112842941	3300009792	Tropical Forest Soil	GLETSIEFRIMPSGNGRWYWEVITGGGKVVIRGVADNEPAACQEASDAARKAKLIQ*
Ga0126384_104782443	3300010046	Tropical Forest Soil	MAENVEFRLMPTGEGPLVWGRPTVIARGVADTEPAACQHASEAARKAKLIE*
Ga0126384_115384891	3300010046	Tropical Forest Soil	MGSLSGTDGSIEFRIMPSGDGRWYWEVIRGGRNIVTRGVADTEPAACQDASDAAR
Ga0126384_116866962	3300010046	Tropical Forest Soil	VELRVMPSGNGSWYWEVITPGPTVIARGVADTEPAACQQASEAARKARLIEERS*
Ga0126384_120871761	3300010046	Tropical Forest Soil	VFRSIQSGRPGIEFRIMPNGERDSRWYWEVIIGGRTIVTRGVADTEPAACQEA
Ga0126382_102703561	3300010047	Tropical Forest Soil	MAENVEFRVMPSGDGHWYWEVIVSHSGPAVIARGMADSEPAACKEASEAARKAQLID*
Ga0126373_123374332	3300010048	Tropical Forest Soil	MAVGNTEPGVEFRIMPNGDRDSRWYWEVLIGGRTVVTRGVADTEPAACQEASAAARTAKLIQ*
Ga0126323_10419691	3300010137	Soil	MPSGDGGWYWEVINVKEVIARGVVDTEPDACKQAANAARKAGLIEHEKPPGDEPSS*
Ga0127503_103521161	3300010154	Soil	PDSVLAYPAMGRRAMAEPQQRNVEFRIMPSGDGRWYWEVIAGIRTVVRRGVAKTEPAACQEASDAARQAELIP*
Ga0126370_107574861	3300010358	Tropical Forest Soil	MNLAGARMAENVELRVMPSGNGSWYWEVITPGPTVIARGVADTEPAACEQAGEAARKARLIEERS*
Ga0126372_119704421	3300010360	Tropical Forest Soil	VGNTPGVEFRIMPNGERDSRWYWEVIIGGRKVVTRGVADTEPAACQEASAAARTAKLIQ*
Ga0126377_131899841	3300010362	Tropical Forest Soil	VGNTEPGVEFRIMPNGERDSRWYWEVIIGGRVVVTRGVADTEPAACQEASAAARTAKLIQ
Ga0126379_128953891	3300010366	Tropical Forest Soil	MSSARLETSIEFRIMPNGNGRWYWEVITGGRKVVTRGVAETEPAACQEAGDAARKAKLIQ
Ga0126379_130107082	3300010366	Tropical Forest Soil	EFRIMPSGGRDSRWYWEVIIDSRTVVTRGVADTEPAACQEASAAARAAQLIQ*
Ga0126383_103924082	3300010398	Tropical Forest Soil	MNLAGARMAENVELRVMPSGNGSWYWEVITPGPTVIARGVADTEPAACQQASEAARKARLIEDRS*
Ga0126383_124752822	3300010398	Tropical Forest Soil	MAENLEFRVMPSGDGRWYWQVIVSRSAPEVIARGVADSEPAACKEASEAARKAKLID*
Ga0137364_114512731	3300012198	Vadose Zone Soil	PSGDGRWYWEVITPGPTVIARGVADAEPVACREASEAARKAKLIE*
Ga0137383_100526455	3300012199	Vadose Zone Soil	MGTGVEYRIMPSDNDGRWYWEVIKDGHEVVARGVADTEPAACQQAGDAARKAKLID*
Ga0137383_103432522	3300012199	Vadose Zone Soil	MGTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQAGQAAREAHLIE*
Ga0137383_109639721	3300012199	Vadose Zone Soil	MSSVNGTATSLEFRIMPSGDGQWYWEVVTSGNNVITRGVADDEPAACQEASEAARKAKLIQ*
Ga0137365_101574883	3300012201	Vadose Zone Soil	MGTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQASQAAREAHLIE*
Ga0137374_103515391	3300012204	Vadose Zone Soil	MREAVMDTAQPDVEFRVMPSGDGRWYWEVIIQRNSVIKRGIADTEPAACQQAREAAREAHLIE*
Ga0150985_1015250751	3300012212	Avena Fatua Rhizosphere	MQTTGETAVEFRVMPNGDGRWYWEIIVSGHKVFDRGLTDTEPAACKEAGEVARKAKLIQ*
Ga0150985_1140505742	3300012212	Avena Fatua Rhizosphere	MPSGDGGWYWEVINLKEVIARGVVDTEPDACKQAANAARKAGLIEHEKPPGDEPSS*
Ga0150985_1200474141	3300012212	Avena Fatua Rhizosphere	MQTTGETAVEFRVMPNGDGRWYWEIIISGHKVFDRGLTDTEPAACKEAGEVARKAKLIQ*
Ga0137372_100226235	3300012350	Vadose Zone Soil	MDTAQPDVEFRVMPSGDGRWYWEVIIQRNSVIKRGIADTEPAACQQAGEAAREAHLIE*
Ga0137367_104193922	3300012353	Vadose Zone Soil	MAQSDVEFRVMPSGDGRWRWEVILGRTVIKRGTAETEPAACRQASEAAREAKLID*
Ga0137367_104466831	3300012353	Vadose Zone Soil	MREAAMDTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQAGEAAREAHLIE*
Ga0137366_101316252	3300012354	Vadose Zone Soil	MDTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQAGEAAREAHLIE*
Ga0137385_107575461	3300012359	Vadose Zone Soil	DVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQASQAAREAHLIE*
Ga0137404_100732733	3300012929	Vadose Zone Soil	MGTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQASQATREAHLIE*
Ga0162651_1000615911	3300012938	Soil	MDTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACKQAGDAAREAHLIE*
Ga0126375_103773711	3300012948	Tropical Forest Soil	ENVEFRVMPSGNGHWYWEVIVSHSGPAVIARGMADSEPAACKEASEAARKAKLID*
Ga0126375_120543541	3300012948	Tropical Forest Soil	KSQIRRTAVGNTPGVEFRIMPNGERDSRWYWEVIIGGRVVVTRGVADTEPAACQEASAAARTARLIQ*
Ga0126369_102208843	3300012971	Tropical Forest Soil	MSRRKTIANNIEFRIMPSGDGSWYWEVIEDGRSIVQRGVASTQPGACAEAHAAAETAGLIC*
Ga0126369_105038534	3300012971	Tropical Forest Soil	MAENVEFRVMPSGNGHWYWEVIVSHSGPAVIARGMADSEPAACKEASE
Ga0126369_136943952	3300012971	Tropical Forest Soil	VSNTAPGVEFRIMPNGERDSRWYWEVIIGGRVVVTRGVADTEPAACQEASAAARTARLIQ
Ga0132258_124640803	3300015371	Arabidopsis Rhizosphere	MTAKDVEFRIMPSGDGRWYWEVISAKDVIARGVADTEPAACAAAHDAAREADLIDDE*
Ga0182041_106419842	3300016294	Soil	GRCSMAENVEFRVMQSGDGRWYWEVITTPGPTVIARGVADTEPAACQQASDAARKAKLIE
Ga0182041_116280592	3300016294	Soil	VSYTEPGVEFRIMPSGGRDSRWYWEVVIRGRTVVTRGLADTEPEACQEASNAARKAKLIA
Ga0182033_111290522	3300016319	Soil	MGEPRRGVEFRIIPNGDGDERWYWEVIVGGHTVVTRGLADNEAACHQASDAAREAKLIQ
Ga0182033_119122621	3300016319	Soil	MSNASGAFDKDVEFRIMPNGDGRWYWEVIQGGRAVVTRGVADDEPSACQEASDAARKQNLIQ
Ga0182033_120197191	3300016319	Soil	VSNTEPGVEFRIMPSGGRDSRWYWEVIIRGRTVVTRGLADTEPEACQEASDAARKAKLIK
Ga0182035_103028892	3300016341	Soil	VNSTEPGVEFRIMPSGGRDSRWYWEVIIDSRTVVTRGVADTEPETCREASDAARKAKLIQ
Ga0182032_108874671	3300016357	Soil	VDKQPNIEFRIMPSGNGHWYWELIKNIRNVVRRGIARTEPEACQEASDAAREAGLMK
Ga0182037_121226562	3300016404	Soil	MGEPRRGVEFRIMPNGGDDNRWYWEVLIGGRMVVTRGVADNEPAACQEASDAAREAKLIQ
Ga0182038_105173752	3300016445	Soil	VKAMSSTSGAFDRDVEFRIMPNGDGRWYWEVIQGGRAVIMRGVADDEPSACKEASNAARKQNLIQ
Ga0066655_108274061	3300018431	Grasslands Soil	MGTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQASEAAREAHLIE
Ga0066655_111075752	3300018431	Grasslands Soil	MAENVECRVMPSGDGRWYWEVITPGPTVIARGVADAEPVACREASEAARKAKLIE
Ga0210403_104257102	3300020580	Soil	MAENVEFRVMPSGDGRWYWEVITPGPTVIARGVADSEPAACKAASDAARKAKLIE
Ga0126371_106997012	3300021560	Tropical Forest Soil	MAESVEFRVMQSGDGGWYWEVITPGPTVIARGVADSEAAACKEASEAARKASLIQ
Ga0207665_109784412	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GDGRWYWEVITPGPTVMARGVADSEPAACKAASDAARKVKLID
Ga0209153_12543581	3300026312	Soil	VSSNTVGDNTDRAVEFRIMPSGNGRWYWEVITGGRRVITRGLADTEPAACQEAGDAARAANLIQ
Ga0209473_12317761	3300026330	Soil	SNTVGDNTDRAVEFRIMPSGNGRWYWEVITGGRRVITRGLADTEPAACQEAGDAARAANLIQ
Ga0209474_106312842	3300026550	Soil	TVSSNTVGDNTDRAVEFRIMPSGNGRWYWEVITGGRRVITRGLADTEPAACQEAGDAARAANLIQ
Ga0209577_101839661	3300026552	Soil	MAENVEFRVMPSGDGRWYWEVITPGPTVIARGVADAEPVACREASEAARKAKLI
Ga0207837_10130361	3300026876	Tropical Forest Soil	MSGSLEANVEFRVMPSGDDRWYWEVITGGRRVIMRGVADTEPAACQEAGNAARKAKLIP
Ga0207762_10612241	3300027063	Tropical Forest Soil	MSSSLEASVEFRVMPSGDDRWYWEVITGGRRVIMRGVADTEPAACQEAGNAARKAKLIP
Ga0209684_10168002	3300027527	Tropical Forest Soil	MAENVEFRVMPSGNGHWYWEVIVSHSGPAVIARGMADSEPAACKEASEAARKAKLID
Ga0207826_11139661	3300027680	Tropical Forest Soil	KNIEFRVMPSGDDRWYWEVITGGRRVIMRGVADTEPAACQEAGNAARKAKLIP
Ga0209382_113306742	3300027909	Populus Rhizosphere	MDTAQPDVEFRVMPSGDGRWYWEVITQRNSVIKRGIADTEPAACQQAGDAARELHLIE
Ga0308189_105419011	3300031058	Soil	MDNQQQNNVEFRIMPSGDGAWYWEVITQRTTIVSRGVADTEPAASSQASDAARKAELIR
Ga0318541_100231713	3300031545	Soil	VSNTEPGVEFRIMPSGGRDGRWYWEVIIGSRTIVTRGVSDTEPEACQEAGDAARKAKLPQ
Ga0318541_101920112	3300031545	Soil	MAENVEFRVMQSGDGRWYWEVITTPGPTVIARGVADTEPAACQQASDAARKAKLIE
Ga0318528_106684491	3300031561	Soil	VNNTEPGVEFRIMPSGGRDGRWYWEVIIGSRTIVTRGVSDTEPEACQEAGDAARKAKLPQ
Ga0310915_100280985	3300031573	Soil	VSNTEPGVEFRVMPSGGRDGRWYWEVIIGSRTIVTRGVSDTEPEACQEAGDA
Ga0318572_102408071	3300031681	Soil	EFRIMPSGGCDGRWYWEVIIGSRTVVTRGVSDTEPEACQEAGDAARKAKLPQ
Ga0306917_100352303	3300031719	Soil	MSSSLEASVEFRVMPSGDDRWYWEVITGGRRVIMRGVADTEPAACQDAGNAARKAKLIP
Ga0306917_111749832	3300031719	Soil	MDSNQKDVEFRVMPSGDGRWYWEVISNRNTVVGRGVADTEPDACRDASAAARKAELIP
Ga0318500_102143661	3300031724	Soil	VAVSNTEPGVEFRIMPSGGRDGRWYWEVIIGSRTIVTRGVSDTEPEACQEAGDAARKAKLPQ
Ga0306918_102387302	3300031744	Soil	MPNGDGRWYWEVIQGGRAVIMRGVADDEPSACKEASNAARKQNLIQ
Ga0306918_107685292	3300031744	Soil	VSNTEPGVEFRIMPSGGRDSRWYWEVIIRGRTVVTRGLADTEPEACQEASNAARKAKLIA
Ga0318502_102810782	3300031747	Soil	VSNTEPGVEFRVMPSGGRDGRWYWEVIIGSRTIVTRGVSDTEPEACQEAGDAARKAKLPQ
Ga0318509_100955723	3300031768	Soil	NTEPGVEFRIMPSGGRDGRWYWEVIIGSRTIVTRGVSDTEPEACQEAGDAARKAKLPQ
Ga0318546_111616051	3300031771	Soil	VSNTEPGVEFRIMPSGGCDGRWYWEVIIGSRTVVTRGVSDTEPEACQEAGNAARKANLIQ
Ga0318544_103737371	3300031880	Soil	IPGTARLGRPVMDSNQKDVEFRVMPSGDGRWYWEVISNRNTVVGRGVADTEPDACRDASAAARKAELIP
Ga0306925_115518122	3300031890	Soil	LEIRVMPSGGRDGRWNWEVIIGSRTVVSRGLADTEPKACQDASDAARKAELIR
Ga0318520_108108051	3300031897	Soil	IRRVAVSNTEPGVEFRVMPSGGRDGRWYWEVIIGSRTIVTRGVSDTEPEACQEAGDAARKAKLPQ
Ga0306921_125250371	3300031912	Soil	MRNASGAFDKDVEFRIMPNGDGRWYWEVIQGGRAVITRGVADDEPSACQEASDAAR
Ga0306921_126283971	3300031912	Soil	VGNTEQGLEFRVMPSGERDGRWYWEVIIGSRTVVSRGLADTEPKACQDASDAARKAELIR
Ga0310916_116681051	3300031942	Soil	VSNTEPGVEFRIMPSGGRDSRWYWEVVIRGRTVVTRGLADTEPEACQEASNAARKAKLIA
Ga0306926_100192281	3300031954	Soil	IPEQEIRRVAVSNTEPGVEFRIMPSGGRDGRWYWEVIIGSRTIVTRGVSDTEPEACQEAGDAARKAKLPQ
Ga0306926_124643491	3300031954	Soil	MSNASGAFDKDVEFRIMPNGDGRWYWEVIQGGRAVITRGVADDEPSACQEASDAARKQNLIQ
Ga0306922_119071621	3300032001	Soil	VDNTEQGVEFRIMPSGGREGRWYWEVIIGGRTVATRGLAETEPEACQEASNAARK
Ga0318504_105914251	3300032063	Soil	NNTEPGVEFRIMPSGGRDGRWYWEVIIGSRTIVTRGVSDTEPEACQEAGDAARKA
Ga0306920_1005261013	3300032261	Soil	VGNTEQGLEFRVMPSGGRDGRWYWEVIIGSRTVVSRGLADTEPKACQDASDAARKAELIR
Ga0306920_1015994052	3300032261	Soil	MGEPRRGVEFRIIPNGDGDERWYWEVIVGGHTVVTRGLADNEPAACQQASDAAREAKLIQ
Ga0306920_1022708131	3300032261	Soil	MPSGDGGWYWEVITTPGQTVIARGVADNEPAACKQASEAARKAKLID
Ga0306920_1043958261	3300032261	Soil	VNSTEPGVEFRIMPSGGRDSRWYWEVIIDSRTVVTRGVADTEPEACSEASDAARKAKLIQ
Ga0310914_109125732	3300033289	Soil	MSSTSGAFDRDVEFRIMPNGDGRWYWEVIQGGRAVIMRGVADDEPSACKEASNAARKQNLIQ
Ga0310914_109872571	3300033289	Soil	AYRKDVEFRVMPSGDGCWYWEIIRGGREVIRRGVADNEPAACQEASDVAREAKLIP
Ga0318519_106290651	3300033290	Soil	MAENVEFRVMQSGDGRWYWEVITTPGPTVIARGVADTEPAACQQASDAARKAKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047982

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences