Metagenome / Metatranscriptome Family F047866

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047866
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	56 residues
Representative Sequence	MTNLTIANIFLFFAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKR
Number of Associated Samples	104
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.73 %
% of genes near scaffold ends (potentially truncated)	26.17 %
% of genes from short scaffolds (< 2000 bps)	88.59 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.007 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (8.725 % of family members)
Environment Ontology (ENVO)	Unclassified (28.859 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.651 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.50% β-sheet: 0.00% Coil/Unstructured: 47.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF02566	OsmC	33.56
PF13180	PDZ_2	31.54
PF13365	Trypsin_2	10.07
PF14714	KH_dom-like	0.67
PF12697	Abhydrolase_6	0.67
PF07690	MFS_1	0.67
PF00582	Usp	0.67
PF02894	GFO_IDH_MocA_C	0.67
PF04138	GtrA	0.67
PF00589	Phage_integrase	0.67
PF05977	MFS_3	0.67
PF01553	Acyltransferase	0.67
PF01416	PseudoU_synth_1	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	33.56
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	33.56
COG0101	tRNA U38,U39,U40 pseudouridine synthase TruA	Translation, ribosomal structure and biogenesis [J]	0.67
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.67
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.01 %
Unclassified	root	N/A	48.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.01 %
Unclassified	root	N/A	48.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.01 %
Unclassified	root	N/A	48.99 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.34 %
Unclassified	root	N/A	48.99 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.34 %
Unclassified	root	N/A	48.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	36.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.99 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	25.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.99 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	25.50 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.99 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	11.41 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.99 %
Nocardioides cynanchi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	7.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01ERB2Y	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	792	Open in IMG/M
3300001538\|A10PFW1_10122096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1197	Open in IMG/M
3300001686\|C688J18823_10880182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	568	Open in IMG/M
3300001686\|C688J18823_10901076	Not Available	561	Open in IMG/M
3300002070\|JGI24750J21931_1036860	Not Available	733	Open in IMG/M
3300002568\|C688J35102_118413725	Not Available	557	Open in IMG/M
3300002568\|C688J35102_118718777	Not Available	589	Open in IMG/M
3300002568\|C688J35102_118887867	Not Available	609	Open in IMG/M
3300002568\|C688J35102_119592671	Not Available	727	Open in IMG/M
3300002568\|C688J35102_120170701	Not Available	910	Open in IMG/M
3300002568\|C688J35102_120513485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1133	Open in IMG/M
3300002568\|C688J35102_120638842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1278	Open in IMG/M
3300002568\|C688J35102_120934022	Not Available	2543	Open in IMG/M
3300003316\|rootH1_10040727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2559	Open in IMG/M
3300003321\|soilH1_10075604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2076	Open in IMG/M
3300003323\|rootH1_10324547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1350	Open in IMG/M
3300004081\|Ga0063454_100656377	Not Available	780	Open in IMG/M
3300004114\|Ga0062593_100220124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1535	Open in IMG/M
3300004114\|Ga0062593_100366760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1268	Open in IMG/M
3300004114\|Ga0062593_101149486	Not Available	810	Open in IMG/M
3300004114\|Ga0062593_102515131	Not Available	583	Open in IMG/M
3300004156\|Ga0062589_101411854	Not Available	679	Open in IMG/M
3300004157\|Ga0062590_102725936	Not Available	527	Open in IMG/M
3300004479\|Ga0062595_100175386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1288	Open in IMG/M
3300004479\|Ga0062595_100824687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	768	Open in IMG/M
3300004479\|Ga0062595_101887031	Not Available	572	Open in IMG/M
3300005093\|Ga0062594_101129427	Not Available	769	Open in IMG/M
3300005163\|Ga0066823_10005901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1611	Open in IMG/M
3300005329\|Ga0070683_102170743	Not Available	533	Open in IMG/M
3300005456\|Ga0070678_101092770	Not Available	736	Open in IMG/M
3300005458\|Ga0070681_10296995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1525	Open in IMG/M
3300005458\|Ga0070681_11306338	Not Available	648	Open in IMG/M
3300005459\|Ga0068867_101087902	Not Available	729	Open in IMG/M
3300005530\|Ga0070679_100227724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1824	Open in IMG/M
3300005535\|Ga0070684_100241136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1652	Open in IMG/M
3300005546\|Ga0070696_101598274	Not Available	560	Open in IMG/M
3300005547\|Ga0070693_100703707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	740	Open in IMG/M
3300005547\|Ga0070693_101284133	Not Available	565	Open in IMG/M
3300005547\|Ga0070693_101387930	Not Available	546	Open in IMG/M
3300005548\|Ga0070665_100002412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	20607	Open in IMG/M
3300005615\|Ga0070702_100421065	Not Available	961	Open in IMG/M
3300005615\|Ga0070702_101858757	Not Available	504	Open in IMG/M
3300005617\|Ga0068859_101483892	Not Available	748	Open in IMG/M
3300005713\|Ga0066905_100494936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1015	Open in IMG/M
3300005719\|Ga0068861_100811416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	879	Open in IMG/M
3300005764\|Ga0066903_107373819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	568	Open in IMG/M
3300005840\|Ga0068870_11220498	Not Available	545	Open in IMG/M
3300005937\|Ga0081455_10089037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2506	Open in IMG/M
3300005937\|Ga0081455_10805117	Not Available	590	Open in IMG/M
3300006173\|Ga0070716_100670052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	789	Open in IMG/M
3300006358\|Ga0068871_100954225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	797	Open in IMG/M
3300006881\|Ga0068865_100988785	Not Available	736	Open in IMG/M
3300009098\|Ga0105245_12081660	Not Available	621	Open in IMG/M
3300009177\|Ga0105248_12241240	Not Available	622	Open in IMG/M
3300009840\|Ga0126313_10149322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1764	Open in IMG/M
3300009840\|Ga0126313_10499061	Not Available	974	Open in IMG/M
3300010036\|Ga0126305_10898163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	605	Open in IMG/M
3300010040\|Ga0126308_10926866	Not Available	608	Open in IMG/M
3300010044\|Ga0126310_10000625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	12525	Open in IMG/M
3300010045\|Ga0126311_11921353	Not Available	503	Open in IMG/M
3300010147\|Ga0126319_1039652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	933	Open in IMG/M
3300010147\|Ga0126319_1109509	Not Available	829	Open in IMG/M
3300010147\|Ga0126319_1552518	Not Available	750	Open in IMG/M
3300010154\|Ga0127503_10803858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300010362\|Ga0126377_10064038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3248	Open in IMG/M
3300011106\|Ga0151489_1705482	Not Available	543	Open in IMG/M
3300011332\|Ga0126317_10894761	Not Available	713	Open in IMG/M
3300012011\|Ga0120152_1025464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2161	Open in IMG/M
3300012212\|Ga0150985_103711925	Not Available	528	Open in IMG/M
3300012212\|Ga0150985_109787764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1098	Open in IMG/M
3300012212\|Ga0150985_111230045	Not Available	886	Open in IMG/M
3300012212\|Ga0150985_122072626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	520	Open in IMG/M
3300012469\|Ga0150984_100319803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1041	Open in IMG/M
3300012469\|Ga0150984_105806742	Not Available	684	Open in IMG/M
3300012469\|Ga0150984_114774862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1479	Open in IMG/M
3300012469\|Ga0150984_117168088	Not Available	693	Open in IMG/M
3300012510\|Ga0157316_1031394	Not Available	645	Open in IMG/M
3300012943\|Ga0164241_10037878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	3607	Open in IMG/M
3300012960\|Ga0164301_10900056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	687	Open in IMG/M
3300012986\|Ga0164304_10528591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	867	Open in IMG/M
3300012988\|Ga0164306_11881527	Not Available	520	Open in IMG/M
3300013102\|Ga0157371_11628745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	506	Open in IMG/M
3300013105\|Ga0157369_10415564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1395	Open in IMG/M
3300013105\|Ga0157369_12100028	Not Available	573	Open in IMG/M
3300013307\|Ga0157372_12398457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	606	Open in IMG/M
3300013308\|Ga0157375_10702798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1165	Open in IMG/M
3300013308\|Ga0157375_11194347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	892	Open in IMG/M
3300013308\|Ga0157375_11517454	Not Available	791	Open in IMG/M
3300013308\|Ga0157375_13039412	Not Available	560	Open in IMG/M
3300013768\|Ga0120155_1174108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	577	Open in IMG/M
3300013832\|Ga0120132_1103629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300014497\|Ga0182008_10186175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300015371\|Ga0132258_10574356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2828	Open in IMG/M
3300015371\|Ga0132258_13589753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300015372\|Ga0132256_101669512	Not Available	746	Open in IMG/M
3300017792\|Ga0163161_12074533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	505	Open in IMG/M
3300020069\|Ga0197907_10465817	Not Available	691	Open in IMG/M
3300020075\|Ga0206349_1218939	Not Available	522	Open in IMG/M
3300020077\|Ga0206351_10028221	Not Available	597	Open in IMG/M
3300020081\|Ga0206354_11613213	Not Available	500	Open in IMG/M
3300020082\|Ga0206353_11227153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1702	Open in IMG/M
3300021384\|Ga0213876_10602555	Not Available	584	Open in IMG/M
3300021445\|Ga0182009_10144362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300022467\|Ga0224712_10022387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2178	Open in IMG/M
3300022467\|Ga0224712_10333079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	715	Open in IMG/M
3300025899\|Ga0207642_10427629	Not Available	798	Open in IMG/M
3300025908\|Ga0207643_10983660	Not Available	546	Open in IMG/M
3300025912\|Ga0207707_10735694	Not Available	826	Open in IMG/M
3300025920\|Ga0207649_11097035	Not Available	628	Open in IMG/M
3300025921\|Ga0207652_10374703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1285	Open in IMG/M
3300025932\|Ga0207690_11849003	Not Available	504	Open in IMG/M
3300025935\|Ga0207709_11855853	Not Available	502	Open in IMG/M
3300025939\|Ga0207665_10447995	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300025941\|Ga0207711_10633449	Not Available	998	Open in IMG/M
3300025944\|Ga0207661_10660893	Not Available	961	Open in IMG/M
3300025972\|Ga0207668_11224336	Not Available	675	Open in IMG/M
3300026023\|Ga0207677_11955618	Not Available	545	Open in IMG/M
3300026095\|Ga0207676_10638952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1026	Open in IMG/M
3300027821\|Ga0209811_10316061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	602	Open in IMG/M
3300027870\|Ga0209023_10749393	Not Available	555	Open in IMG/M
3300028379\|Ga0268266_10006105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11096	Open in IMG/M
3300028379\|Ga0268266_10348257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1392	Open in IMG/M
3300028755\|Ga0307316_10169411	Not Available	782	Open in IMG/M
3300028802\|Ga0307503_10011610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2624	Open in IMG/M
3300028802\|Ga0307503_10241877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	877	Open in IMG/M
3300028870\|Ga0302254_10001251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	7058	Open in IMG/M
3300030047\|Ga0302286_10134544	Not Available	1259	Open in IMG/M
3300030838\|Ga0311335_10752788	Not Available	687	Open in IMG/M
3300030943\|Ga0311366_10922199	Not Available	756	Open in IMG/M
3300031058\|Ga0308189_10510299	Not Available	519	Open in IMG/M
3300031091\|Ga0308201_10407384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	513	Open in IMG/M
3300031232\|Ga0302323_103178475	Not Available	523	Open in IMG/M
3300031366\|Ga0307506_10233392	Not Available	692	Open in IMG/M
3300031726\|Ga0302321_101630353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300031938\|Ga0308175_100158584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2179	Open in IMG/M
3300031938\|Ga0308175_100301252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1634	Open in IMG/M
3300031938\|Ga0308175_100314837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1602	Open in IMG/M
3300031938\|Ga0308175_100352419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1521	Open in IMG/M
3300031938\|Ga0308175_100731517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1077	Open in IMG/M
3300031938\|Ga0308175_100769003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300031938\|Ga0308175_100831240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300031938\|Ga0308175_100924987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	960	Open in IMG/M
3300031938\|Ga0308175_101128251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides cynanchi	870	Open in IMG/M
3300031996\|Ga0308176_10205272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1857	Open in IMG/M
3300031996\|Ga0308176_10290081	Not Available	1589	Open in IMG/M
3300031996\|Ga0308176_11918100	Not Available	632	Open in IMG/M
3300032074\|Ga0308173_10267558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300034268\|Ga0372943_0015416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	4027	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.77%
Host-Associated	Host-Associated	33.56%
Engineered	Engineered	0.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.75%
Plants	Host-Associated → Plants	33.56%
Aquatic	Environmental → Aquatic	4.03%
Solid Waste	Engineered → Solid Waste	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.77%
Freshwater	Environmental → Aquatic → Freshwater	4.03%
Peat	Environmental → Terrestrial → Peat	4.03%
Roots	Host-Associated → Plants → Roots	1.34%
Rhizome	Host-Associated → Plants → Rhizome	1.34%
Grass	Engineered → Solid Waste → Grass	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.26%
Loam	Environmental → Terrestrial → Soil → Loam	19.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.03%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.36%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.34%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.67%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.67%
Composting	Engineered → Solid Waste → Grass → Composting	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	7.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.36%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.34%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.67%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.67%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.37%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.70%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.03%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.03%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.36%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.34%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.34%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.34%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.67%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.67%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.67%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_04178580	2170459015	Switchgrass, Maize And Mischanthus Litter	MPNNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVRHSQLPHKR
A10PFW1_101220962	3300001538	Permafrost	MTNLTIANILLFLAILCLTLSAAAGLMLFFFYSMAATTLAGAVRHQQ
C688J18823_108801822	3300001686	Soil	MSNLTIANIFLFCAILCLAMSAMLMSPLYFIYSFGATTLAGAVRHQQLPHKR*
C688J18823_109010762	3300001686	Soil	MLISNLTIANIFLFLAILCMVLSAVAALPLYFVYSIGATALAGAVRYDQLPHDEEK
JGI24750J21931_10368602	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	PMSNLTIANIFLFLAILCMALSFSAGLFLYFIYSIAATALAGAVRYDQLPDKKEKTIRR*
C688J35102_1184137251	3300002568	Soil	MSNLTIANIFLFFAILCMTLSFSAGLLLYFVYSIAATAMAGAVRYHQLDHKPPRAPREH*
C688J35102_1187187772	3300002568	Soil	MSNLTIANIFLFFSILCMTLSFSAGLMLFFVYSIVATAMAAALRYQQMPHDEPSGRRR*
C688J35102_1188878671	3300002568	Soil	MFISNLTIANIFLFLAILCMVLSAAAALPLYFVYSVGATFLAGTVRYNQLPEDKKTQHH*
C688J35102_1195926712	3300002568	Soil	MFISNLTIANIFLFLAILCMVLSAAAALPLYFVYSIAATALAGAVRYNQLPHDKEKTPQR
C688J35102_1201707012	3300002568	Soil	MFISNLTIANIFLFLAILCMVLSAAAALPLYFVYSIGATFLAGAVRYNQLPDDKKTQRH*
C688J35102_1205134852	3300002568	Soil	MPNNLTIANIFLFCAILCLALSAIVESPFYFVYSFGATALAGAVRHSQLPQKR*
C688J35102_1206388423	3300002568	Soil	MPNNLTIANIFLFCAILCLALSAMVQSPFYFFYSFGATALAGAVRHGQLPHKR*
C688J35102_1209340222	3300002568	Soil	MSNLTIANIFLFFAILCMTLSFAEGLMLYFVYSIVATAMAGAVRYQQLPEKTRRPRPR*
rootH1_100407273	3300003316	Sugarcane Root And Bulk Soil	MSNLTIANIFLFFAILCMTLSFAAGLLLYFVYSIGATAMAGAVRYQQMDHERPKARHH*
soilH1_100756042	3300003321	Sugarcane Root And Bulk Soil	MSNLTIANIFLFLAILCMVLSLSAGLMLYFFYSIGATAMAGAVRYDQMPHDKETRQH*
rootH1_103245473	3300003323	Sugarcane Root And Bulk Soil	MSNLTIANIFLFLAILCMALSFSAGLYLYYVYSIGATVMAGAVRHQQMPHKDAKRN*
Ga0063454_1006563772	3300004081	Soil	MFISNLTIANIFLFLAILCMVLSAAAALPLYFVYSIAATALAGAVRYNQLPHDSKKKTQHR*
Ga0062593_1002201242	3300004114	Soil	MSNLTIANIFLFLAILCMALSFSAGLFLYFIYSIAATALAGAVRYDQLPDKKEKTIRR*
Ga0062593_1003667602	3300004114	Soil	MSNLTIANIFLFFAILCMTLSFYAGLMLYFIYSIGATAMAGAVRYQQLPAKPPRAPHH*
Ga0062593_1011494861	3300004114	Soil	MTNLTIANIFLFFAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKRPKAPRH*
Ga0062593_1025151312	3300004114	Soil	MPNNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVRHSQLPHKR*
Ga0062589_1014118542	3300004156	Soil	MSNLTIANIFLFFAILCMTLSFYAGLVLYFIYSIGATAMAGAVRYQQLPAKPPRAPHH*
Ga0062590_1027259361	3300004157	Soil	MTNLTIANIFLFFAILCMALSFSAGLLLYFVYSIGATAMAGAVRYQQLPEKRPKAPRH*
Ga0062595_1001753862	3300004479	Soil	MFISNLTIANIFLFLAILCMVLSAVAALPLYFVYSVGATALAGAVRYNQLPHDEEKTPQR
Ga0062595_1008246872	3300004479	Soil	MTNLTIANIFLFFAILCLTLSVAVMAPLFGIYSFGATVLAGAVRHSQLPQKR*
Ga0062595_1018870312	3300004479	Soil	MTNLTIANIFLFCALLCLALSAMIHSPLYFIYSFGTVALAGAVRHSQLPHKR*
Ga0062594_1011294272	3300005093	Soil	MSNLTIANIFLFFAILCMALSFSAGLLLYFVYSFAATAMAGAVRYQQLPHKPPKAKHH*
Ga0066823_100059013	3300005163	Soil	MPNNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVRHSQLPQKR*
Ga0070683_1021707431	3300005329	Corn Rhizosphere	MTNLTIANIFLFFAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKRPKAPHH*
Ga0070678_1010927702	3300005456	Miscanthus Rhizosphere	IFLFFAILCMALSFSAGLLLYFVYSIAATAMAGAVRYQQLPHKPPKAKHH*
Ga0070681_102969952	3300005458	Corn Rhizosphere	MSNLTIANIFLFFAILCMTLSFYAGLMLFYVYSIGATAMAGALRHQQLPHDQHR*
Ga0070681_113063382	3300005458	Corn Rhizosphere	MSNLTIANIFLFLAILCMALSFSPGLFLYFIYSIAATALAGAVRYDQLPDKKEKTIRR*
Ga0068867_1010879021	3300005459	Miscanthus Rhizosphere	NLTIANIFLFLAILCMVLSAVAALPLYFVYSVGATALAGAVRYNQLPHDEEKTPQR*
Ga0070679_1002277242	3300005530	Corn Rhizosphere	MSNLTIANIFLFLAIFCMALSFSAGLMLYFLYSIGATVMAGAVRHQQMPHDEPAGRSH*
Ga0070684_1002411363	3300005535	Corn Rhizosphere	MSNLTIANIFLFLAILCMVLSLSAGLLLYFFYSIGATAMAGAIRYNQMPHDAGKRHQH*
Ga0070696_1015982742	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MSDLTIANIFLFLAILCMALSFSAGLFLYFIYSIAATALAGAVRYDQLPDKKEKTIRR*
Ga0070693_1007037072	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLTIANIFLFCAVLCLALSAMLMSPLYFIYSFGATTLAGAVRHQQLPHKR*
Ga0070693_1012841332	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTNLTIANIFLFCALLCLALSAMIHSPFYFIYSFGTVALAGAVRHSQLPHKR*
Ga0070693_1013879301	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTNLTIANIFLFCAILCLAMSAMIGSPFYFFYSFGATALAGAVRHGQLPHKQ*
Ga0070665_10000241213	3300005548	Switchgrass Rhizosphere	MSNLTIANIFLFLAILCMALSFSAGLMLYFLYSIGATAMAGAVRHQQMPHDQPSGRPH*
Ga0070702_1004210652	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLTIANIFLFFAILCMALSFSAGLLLYFVYSIAATAMAGAVRYQQLPHKPPKAKHH*
Ga0070702_1018587572	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VRRLGPAITNLTIANIFLFCALLCLALSAMIHSPFYFIYSFGTVALAGAVRHSQLPHKR*
Ga0068859_1014838921	3300005617	Switchgrass Rhizosphere	MSNLTIANIFLFFAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKRPKAPRH*
Ga0066905_1004949361	3300005713	Tropical Forest Soil	MFISNLTIANIFLFLAILCMVLSAVAALPLYFVYSVGATALAGAVRYNQLPHDDKKTSHR
Ga0068861_1008114161	3300005719	Switchgrass Rhizosphere	MFISNLTIANIFLFLAILCMVLSAVAALPLYFVYSVGATALAGAVRYNQLPHDEEKTP
Ga0066903_1073738192	3300005764	Tropical Forest Soil	MSNLTIANIFLFFAILCLAISAEIGWPLYFIYSMVAVALAGAVRHGQLPQHPPRAQKPRH
Ga0068870_112204982	3300005840	Miscanthus Rhizosphere	SNLTIANIFLFLAILCMALSFSAGLFLYFIYSIAATALAGAVRYDQLPDKKEKTIRR*
Ga0081455_100890371	3300005937	Tabebuia Heterophylla Rhizosphere	MSNLTIANIFLFFAILCMALSFYAGLFLYFVYSIGATAMAGPVRYEQLPHKPPKAKHH*
Ga0081455_108051171	3300005937	Tabebuia Heterophylla Rhizosphere	MSNLTIANIFLFFAILCMTLSFAAGLMLYFIYSIGATAMAGAVRYQQLPVKPPRAP
Ga0070716_1006700521	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPNNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVR
Ga0068871_1009542251	3300006358	Miscanthus Rhizosphere	MTNLTIANIFLFFAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKRPK
Ga0068865_1009887851	3300006881	Miscanthus Rhizosphere	MFISNLTIANIFLFLAILCMVLSAVAALPLYFVYSVGATALAGAVRYNQLPHD
Ga0105245_120816601	3300009098	Miscanthus Rhizosphere	MPNNLTIANIFLFCAILCLALSAMVQSPFYFFYSFGATAL
Ga0105248_122412402	3300009177	Switchgrass Rhizosphere	AMTNLTIANIFLFFAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKRPKAPRH*
Ga0126313_101493222	3300009840	Serpentine Soil	MGDIGEGRAMTNLTIANIFLFFAILCLTLSAAASAPLMFLYSMGATAMAGAVRHGQLPKKP*
Ga0126313_104990611	3300009840	Serpentine Soil	MSNLTIANIFLFFAILCMTLSFSAGLMLYFVYSIAATAMAGAVRHQQLPEKRDRARPHR*
Ga0126305_108981632	3300010036	Serpentine Soil	MSNLTIANIFLFFAILCMTLSFSAGLLLYFVYSIGATAMAGAVRYTQLPDKPGRARTR*
Ga0126308_109268661	3300010040	Serpentine Soil	MSNLTIANIFLFFAILCMTLSFSAGLMLYFVYSIAATAMAGAVRHQQLPEKRGGARPHR*
Ga0126310_100006251	3300010044	Serpentine Soil	MSNLTIANIFLFFAILCMTLSFSAGLLLYFVYSIAATAMAGAVRYQQLPEKTRRERRH*
Ga0126311_119213532	3300010045	Serpentine Soil	MSNLTIANIFLFFAILCMTLSFSAGLMLYFVYSIAATAMAGAVRHQQLPEKR
Ga0126319_10396521	3300010147	Soil	MTNLTIANIFLFCAILCLALSAMISSPFYFIYSFATTALAGAVRHSQLPHKR*
Ga0126319_11095091	3300010147	Soil	PMPISNLTIASIFLFLAILCMVLSAAAALPLYFVYSIAATTLAGAVRYNQLPHDKKTQHR
Ga0126319_15525181	3300010147	Soil	MTNLTIANIFLFCALLCLALSAMLHSPLYFIYSFGTVALAGAVRHSQLPAKRPEKR*
Ga0127503_108038581	3300010154	Soil	MTNLTIANIFLFFAILCLTLSVATMAPLFGIYSFGATVLAGVVRHNQLPHKR*
Ga0126377_100640383	3300010362	Tropical Forest Soil	MSNLTIANIFLFFAILCMALSFYAGLLLYFIYSIAATAMAGAVRYEQLPHKPPKAKHR*
Ga0151489_17054821	3300011106	Soil	NLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVRHSQLPQKR*
Ga0126317_108947611	3300011332	Soil	MFISNLTIANIFLFLAILCMVLSAAAALPLYFVYSIAATALAGAVRYNQLPHDEEKTPQR
Ga0120152_10254642	3300012011	Permafrost	MTNLTIANILLFLAILCLTLSAAAGLMLFFFYSMAATTLAGAVRHQQLPHDG*
Ga0150985_1037119251	3300012212	Avena Fatua Rhizosphere	MSNLTIANIFLFFAILCMTLSFAAGLMLFFVYSIGATAMAGAVRYQQLPHKTGRARPR*
Ga0150985_1097877641	3300012212	Avena Fatua Rhizosphere	ISNLTIANIFLFLAILCMVLSAVAALPLYFVYSIGATALAGAVRYNQLPHDEEKTPQR*
Ga0150985_1112300451	3300012212	Avena Fatua Rhizosphere	NIFLFLAILCMVLSAVAALPLYFVYSIGATALAGAVRYDQLPHDEEKSQSR*
Ga0150985_1220726262	3300012212	Avena Fatua Rhizosphere	MSNLTIANIMLFFAILCLTLSFAAGMMLFFVYSIGATALAGAVRHDQLPHRR*
Ga0150984_1003198032	3300012469	Avena Fatua Rhizosphere	MSNLTIANIFLFCAILCLALSAMLMSPLYFIYSFGATTLAGAVRHQQLPHKR*
Ga0150984_1058067422	3300012469	Avena Fatua Rhizosphere	MTNLAIANIFLFCAILCMALSAMVSSPLFFIYSVGATTLAGAVRHGQLPNKR*
Ga0150984_1147748621	3300012469	Avena Fatua Rhizosphere	MFISNLTIANIFLFLAILCMVLSAAAALPLYFVYSIAATALAGAGRYNQLPHDSKKKTQHR*
Ga0150984_1171680881	3300012469	Avena Fatua Rhizosphere	MLISNLTIANIFLFLAILCMVLSAVAALPLYFVYSIGATALAGAVRYDQLPHDEEKSQSR
Ga0157316_10313942	3300012510	Arabidopsis Rhizosphere	MFISNLTIANIFLFLAILCMVLSAAAALPLYFVYSVGATTLAGAVRYNQLPHDDKKPQRR
Ga0164241_100378783	3300012943	Soil	MSNLTIANIFLFFAILCMTLSFYAGLVLYFIYSIGATAMAGAVRYQQLPAKPPRAPHR*
Ga0164301_109000562	3300012960	Soil	MTNLTIANIFLFFAILCLVLSAQAGMPLYFFYSMIAITLAGAVRHDQMPHKPKAKSRH*
Ga0164304_105285912	3300012986	Soil	MSNLTIANIFLFFAILCMTLAFSAGLMLYFIYSIGATAMAGAVRYQQLPAKQRTKPRH*
Ga0164306_118815272	3300012988	Soil	MSNLTIANIFLVFAVLCMVLSFSAGLLLYFVYSIGATAMAGAVRYQQLPEKRPKAPHH*
Ga0157371_116287452	3300013102	Corn Rhizosphere	MSNLTIANIFLFFAILCMTLAFSAGLMLYFVYSIGATAMAGAVRYQQLPAKQRTKPRH*
Ga0157369_104155642	3300013105	Corn Rhizosphere	MPNNLTIANIFLFCAILCLALIAMVQSPFYFFYSFGATALAGAVRHGQLPHKR*
Ga0157369_121000281	3300013105	Corn Rhizosphere	MLTNLTIANIFLFFALLCLAMSAMINSPFYFIYSFATVALAGAVRHSQLPHKR*
Ga0157372_123984571	3300013307	Corn Rhizosphere	MGDTGEGRAMTNLTIANIFLFFAILCLTLSVAVMAPLFGIYSFGATVLAGAVRHSQLPQK
Ga0157375_107027981	3300013308	Miscanthus Rhizosphere	AAMTNLTIANIFLFFAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKRPKAPRH
Ga0157375_111943472	3300013308	Miscanthus Rhizosphere	MGDTGEGRAMTNLTIANIFLFFAILCLTLSAAASAPLMFLYSMGATAMAGAVRHGQLPKKP*
Ga0157375_115174541	3300013308	Miscanthus Rhizosphere	NLTIANIFLFCAILCLALSAMVQSPFYFFYSFGATALAGAVRHGQLPHKR*
Ga0157375_130394122	3300013308	Miscanthus Rhizosphere	MTNLTIANIFLFFAILCLTLSAAASAPLMFLYSMGATAMAGAVRHGQLPKKP*
Ga0120155_11741082	3300013768	Permafrost	MTNLTIANILLFLAILCLTLSAAAGLMLFFFYSMAATTLAGAVRHH
Ga0120132_11036292	3300013832	Permafrost	MSNLTIANIMLFFAILCLTLSAAAGMVLFFVYSMGATALAGAVRYQQLPHGG*
Ga0182008_101861752	3300014497	Rhizosphere	MSNLTIANIFLFFAILCMTLSFYAGLVLYFVYSIGATAMAGAVRYEQMPHKPPRVRR*
Ga0132258_105743564	3300015371	Arabidopsis Rhizosphere	MFISNLTIANIFLFLAILCMVLSAAAALPLYFVYSIGATTLAGAVRYNQLPHDEKTQRH*
Ga0132258_135897532	3300015371	Arabidopsis Rhizosphere	MTNLTIANIFLFFAILCLALSAAATAPVMFCYSTVATGLAGAVRHGQLPKRR*
Ga0132256_1016695122	3300015372	Arabidopsis Rhizosphere	MFISNLTIANIFLFLAILCMVLSAVAALPLYFVYSVGATTLAGAVRYNQLPHDEEKTPQR
Ga0163161_120745332	3300017792	Switchgrass Rhizosphere	MTNLTIANIFLFFAILCLTLSVAVMAPLFGIYSFGATVLAGAVRHSQLPQKR
Ga0197907_104658172	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLTIANIFLFFAILCMALSFSAGLMLFFVYSIAATAMAAAVRYDQLPHKRGPDARRH
Ga0206349_12189391	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	GSVVRRAYPTRTCPMSNLTIANIFLFLAILCMALSFSAGLFLYFIYSIAATALAGAVRYDQLPDKKEKTIRR
Ga0206351_100282212	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLTIANIFLFLAILCMALSFSAGLFLYFIYSIAATALAGAVRYDQLPDKKEKTIRR
Ga0206354_116132132	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLTIANIFLFLAILCMVLSLSAGLLLYFFYSIGATAMAGAIRYNQMPHDAQKRHQH
Ga0206353_112271532	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLTIANIFLFLAILCMVLSLSAGLLLYFFYSIGATAMAGAIRYNQMPHDAGKRHQH
Ga0213876_106025552	3300021384	Plant Roots	LRMSNLTIANIMLFFAILCLTLSAAAGLTLFFIYSIAAVGMAAALRHSQMDHEQKAPRRR
Ga0182009_101443622	3300021445	Soil	MSNLTIANIFLFFAILCMTLSFYAGLVLYFVYSIGATAMAGAVRYEQMPHKPPRVRR
Ga0224712_100223872	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLTIANIFLFLAILCMALSFSAGLVLYFIYSIAATALAGAVRYDQLPDKKEKTIRR
Ga0224712_103330791	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLTIANIFLFFAILCMTLSFYAGLMLFYVYSIGATAMAGALRHQQLPHDQHR
Ga0207642_104276291	3300025899	Miscanthus Rhizosphere	PMSNLTIANIFLFLAILCMALSFSAGLFLYFIYSIAATALAGAVRYDQLPDKKEKTIRR
Ga0207688_107167981	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	FLFFAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKRPKAPRH
Ga0207643_109836602	3300025908	Miscanthus Rhizosphere	SNLTIANIFLFLAILCMALSFSAGLFLYFIYSIAATALAGAVRYDQLPDKKEKTIRR
Ga0207707_107356941	3300025912	Corn Rhizosphere	ANIFLFFAILCMTLSFYAGLMLFYVYSIGATAMAGALRHQQLPHDQHR
Ga0207649_110970352	3300025920	Corn Rhizosphere	MSNLTIANIFLFFAILCMTLSFYAGLMLYFIYSIGATAMAGAVRYQQLPAKPPRAPHH
Ga0207652_103747033	3300025921	Corn Rhizosphere	MSNLTIANIFLFLAIFCMALSFSAGLMLYFLYSIGATVMAGAVRHQQMPHDEPAGRSH
Ga0207690_118490031	3300025932	Corn Rhizosphere	MSNLTIANIFLFFAILCMALSFSAGLLLYFVYSIAATAMAGAVRYQQLPHKPPKAKHH
Ga0207709_118558532	3300025935	Miscanthus Rhizosphere	MTNLTIANIFLFCALLCLALSAMIHSPLYFIYSFGTVALAGAVRHSQLPHKR
Ga0207665_104479951	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPNNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVRHSQL
Ga0207711_106334491	3300025941	Switchgrass Rhizosphere	MSNLTIANIFLFFAILCMALSFSAGLLLYFVYSIGATAMAGAVRYQQLPAKQRTKPRH
Ga0207661_106608931	3300025944	Corn Rhizosphere	MSNLTIANIFLFFAILCMALSFSAGLLLYFVYSIGATAMAGAVRYQQLPEKRPKAPRH
Ga0207668_112243362	3300025972	Switchgrass Rhizosphere	MFISNLTIANIFLFLAILCMVLSAVAALPLYFVYSVGATALAGAVRYNQLPYDEEKTPQR
Ga0207677_119556181	3300026023	Miscanthus Rhizosphere	MPNNLTIANIFLFCAILCLALSAMVQSPFYFFYSFGATALAGAVRHGQLPHKR
Ga0207676_106389522	3300026095	Switchgrass Rhizosphere	MTNLTIANIFLFFAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKR
Ga0209811_103160611	3300027821	Surface Soil	MTNLTIANIFLFFAILCLTLSVATMAPLFGIYSFGATVLAGVVRHNQLPHKR
Ga0209023_107493932	3300027870	Freshwater And Sediment	MSNLTIANIMLFFAILCLTLSAAAGLTLFFIYSIAAVGMAAALRHSQMDHNEKAPRRR
Ga0268266_1000610512	3300028379	Switchgrass Rhizosphere	MSNLTIANIFLFLAILCMALSFSAGLMLYFLYSIGATAMAGAVRHQQMPHDQPSGRPH
Ga0268266_103482573	3300028379	Switchgrass Rhizosphere	MTNLTIANIFLFVAILCMALSFSAGLFLYFVYSIGATAMAGAVRYQQLPEKRPKAPRH
Ga0307316_101694111	3300028755	Soil	MSNLSIANIFLFVAILCMILSFSAGLLLYFVYSIGATAMAGAVRYEQLPPKKPKARH
Ga0307503_100116103	3300028802	Soil	MFISNLTIANIFLFLAILCMVLSAVAALPLYFVYSIGATALAGAVRYNQLPHDEEKTPQR
Ga0307503_102418771	3300028802	Soil	MPISNLTIANIFLFLAILCMVLSAAAALPLYFVYSIAATTLAGAVRYNQLPHDDKKTQHR
Ga0302254_100012513	3300028870	Fen	MTNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGDVRHSQLPHKR
Ga0302286_101345442	3300030047	Fen	MTNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVRHSQLPHKR
Ga0311335_107527882	3300030838	Fen	MNNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVRHSQLPHKH
Ga0311366_109221991	3300030943	Fen	AMTNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVRHSQLPHKH
Ga0308189_105102992	3300031058	Soil	MTNLTIANIFLFFAILCMALSFSAGLLLYFVYSIGATAMAGAVRYQQLPEKRPKAPRH
Ga0308201_104073842	3300031091	Soil	MSNLTIANIFLFFALLCMTLSFSAGLMLYFLYSIGATAMAGAVRHQQLPVKQRTKPRH
Ga0302323_1031784752	3300031232	Fen	NNLTIANIFLFCAILCLALSAIVQSPFYFFYSFGATALAGAVRHSQLPHKH
Ga0307506_102333921	3300031366	Soil	MLTNLTIANIFLFFAILCLTLSVATMAPLFGIYSFGATVLAGVVRHNQLPHKR
Ga0302321_1016303532	3300031726	Fen	MTNLTIANIFLFCAILCLALSAIVQSPFYFVYSFGATALAGAVRHSQLPHKR
Ga0308175_1001585842	3300031938	Soil	MSNLTIANIFLFLAILCMALSFSAGLYLYYVYSIAATVMAGAVRHQQMPHNDAKRN
Ga0308175_1003012522	3300031938	Soil	MSNLTIANIFLFFALLCMTLSFSAGLMLYFVYSIGATAMAGAVRYQQLPQKQRNSKPRH
Ga0308175_1003148371	3300031938	Soil	MLSNLTIANIFVFLAITCMLLSFSAGLMLYFFYSIGATALAGAVRYNQLPHNESKRR
Ga0308175_1003524191	3300031938	Soil	MSPGVHMSNLTIANILLFFAILCLALSAAAGLMLFFVYSFGATTLAGAVRHQQLPH
Ga0308175_1007315172	3300031938	Soil	MSNLTIANIFLFFAILCMTLSFYAGLVLYFIYSIGATAMAGAVRYQQLPAKPPRAPHL
Ga0308175_1007690031	3300031938	Soil	MSNLTIANILLFFAILCLALSAAAGLMLFFVYSFGATTLAGAVRHQQLPHDR
Ga0308175_1008312401	3300031938	Soil	MSNLTIANIMLFFAILCLALSAAAGMMLFFVYSMGATTLAGAVRHQQLPHDS
Ga0308175_1009249871	3300031938	Soil	MSNLTIANIMLFFAILCLALSAAAGMMLFFVYSMGATTLAGAVRHQQLPHDG
Ga0308175_1011282511	3300031938	Soil	MSNLTIANIFLFFAILCMTLSFSAGLLLYFIYSIGATAMAGAVRYQQLPHKPPKVRRN
Ga0308176_102052722	3300031996	Soil	MTNLTIANIFLFFAILCLTLSAAASAPLMFIYSMGATAMAGAVRHGQLPKKP
Ga0308176_102900813	3300031996	Soil	MTNLTIANIFLFCAILCLALSAMVMSPFYFFYSFGATALAGAVRHSQLPHKR
Ga0308176_119181002	3300031996	Soil	MSNLTIANIFLFFAILCMTLSFSAGLMLYFVYSIGATAVAGAVRYQQLPQK
Ga0308173_102675582	3300032074	Soil	MSNLTIANIFLFFALLCMTLSFSAGLMLYFVYSIGATAMAGAVRYQQLPEKQRNSKPRH
Ga0372943_0015416_787_945	3300034268	Soil	MSNLTIANIMLFFAILCLVLSAAAGMVLFFVYSMVATTLAGAVRHQQLPHDH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047866

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences