Metagenome / Metatranscriptome Family F047841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047841
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	74 residues
Representative Sequence	VRPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF
Number of Associated Samples	128
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.67 %
% of genes near scaffold ends (potentially truncated)	94.63 %
% of genes from short scaffolds (< 2000 bps)	90.60 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.658 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.765 % of family members)
Environment Ontology (ENVO)	Unclassified (23.490 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.416 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 49.47% Coil/Unstructured: 50.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF12849	PBP_like_2	16.11
PF02310	B12-binding	6.71
PF00730	HhH-GPD	2.01
PF02129	Peptidase_S15	2.01
PF12838	Fer4_7	1.34
PF00989	PAS	0.67
PF01432	Peptidase_M3	0.67
PF13302	Acetyltransf_3	0.67
PF01609	DDE_Tnp_1	0.67
PF12627	PolyA_pol_RNAbd	0.67
PF04191	PEMT	0.67
PF02737	3HCDH_N	0.67
PF13365	Trypsin_2	0.67
PF12732	YtxH	0.67
PF02518	HATPase_c	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG0177	Endonuclease III	Replication, recombination and repair [L]	2.01
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	2.01
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	2.01
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	2.01
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	2.01
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.67
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.67
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.67
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.67
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.67
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.67
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.67
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.67
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.67
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.67
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.67
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.67
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.67
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.67
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.66 %
Unclassified	root	N/A	1.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.66 %
Unclassified	root	N/A	1.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.66 %
Unclassified	root	N/A	1.34 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	88.59 %
Unclassified	root	N/A	1.34 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	61.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.03 %
Unclassified	root	N/A	1.34 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.34 %
Unclassified	root	N/A	1.34 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.34 %
Unclassified	root	N/A	1.34 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.74 %
Unclassified	root	N/A	1.34 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.74 %
Unclassified	root	N/A	1.34 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10097912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300001593\|JGI12635J15846_10138788	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1686	Open in IMG/M
3300002558\|JGI25385J37094_10068185	All Organisms → cellular organisms → Bacteria → Acidobacteria	1142	Open in IMG/M
3300002560\|JGI25383J37093_10145338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300002560\|JGI25383J37093_10206236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300002917\|JGI25616J43925_10156225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	908	Open in IMG/M
3300003322\|rootL2_10361982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1390	Open in IMG/M
3300005167\|Ga0066672_10625629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300005174\|Ga0066680_10821778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005187\|Ga0066675_10958358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300005332\|Ga0066388_104687246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300005446\|Ga0066686_11071338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300005468\|Ga0070707_100177166	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300005468\|Ga0070707_101867806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005534\|Ga0070735_10090457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1938	Open in IMG/M
3300005536\|Ga0070697_100054307	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3256	Open in IMG/M
3300005536\|Ga0070697_100479148	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300005557\|Ga0066704_10303872	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300005561\|Ga0066699_11166669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300005576\|Ga0066708_10081124	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300005586\|Ga0066691_10397147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300005602\|Ga0070762_10081659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1839	Open in IMG/M
3300005712\|Ga0070764_10516574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300005764\|Ga0066903_100723013	All Organisms → cellular organisms → Bacteria → Acidobacteria	1761	Open in IMG/M
3300005921\|Ga0070766_10310122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300005921\|Ga0070766_10828223	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300005944\|Ga0066788_10179289	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006028\|Ga0070717_11288699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300006174\|Ga0075014_100125356	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300006176\|Ga0070765_101352207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300006176\|Ga0070765_101500616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300006176\|Ga0070765_102080924	Not Available	530	Open in IMG/M
3300009038\|Ga0099829_11303841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300009089\|Ga0099828_10983469	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300009137\|Ga0066709_103960564	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300009520\|Ga0116214_1147846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300009523\|Ga0116221_1103928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300009552\|Ga0116138_1069489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300009618\|Ga0116127_1106946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300009764\|Ga0116134_1034284	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300010321\|Ga0134067_10159619	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300010335\|Ga0134063_10288818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300010339\|Ga0074046_10289916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300011271\|Ga0137393_10365999	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M
3300012199\|Ga0137383_10349968	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300012206\|Ga0137380_11624607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300012208\|Ga0137376_10379609	All Organisms → cellular organisms → Bacteria → Acidobacteria	1227	Open in IMG/M
3300012212\|Ga0150985_100711788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300012361\|Ga0137360_10557144	All Organisms → cellular organisms → Bacteria → Acidobacteria	979	Open in IMG/M
3300012582\|Ga0137358_10184811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1422	Open in IMG/M
3300012685\|Ga0137397_11296405	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300012918\|Ga0137396_11156212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012923\|Ga0137359_10173661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1924	Open in IMG/M
3300012925\|Ga0137419_10438365	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300012925\|Ga0137419_10526880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300012927\|Ga0137416_10387610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300012927\|Ga0137416_11331323	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300012929\|Ga0137404_10639870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300012929\|Ga0137404_10739549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300012930\|Ga0137407_11230543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300014489\|Ga0182018_10137998	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300014495\|Ga0182015_10165113	All Organisms → cellular organisms → Bacteria → Acidobacteria	1497	Open in IMG/M
3300015241\|Ga0137418_10137028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2167	Open in IMG/M
3300015356\|Ga0134073_10065769	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300015357\|Ga0134072_10003908	All Organisms → cellular organisms → Bacteria → Acidobacteria	3136	Open in IMG/M
3300016341\|Ga0182035_10625547	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300017946\|Ga0187879_10354377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300017975\|Ga0187782_11006634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300018030\|Ga0187869_10429963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300018046\|Ga0187851_10612226	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300018062\|Ga0187784_10653712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300019789\|Ga0137408_1031692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300020001\|Ga0193731_1096565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300020002\|Ga0193730_1184403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300020004\|Ga0193755_1208241	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300020580\|Ga0210403_10384681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300020583\|Ga0210401_10252483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1623	Open in IMG/M
3300020583\|Ga0210401_10313920	All Organisms → cellular organisms → Bacteria → Acidobacteria	1429	Open in IMG/M
3300021088\|Ga0210404_10338275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300021088\|Ga0210404_10339317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300021170\|Ga0210400_10710540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300021170\|Ga0210400_10855681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300021171\|Ga0210405_10983128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300021180\|Ga0210396_10923168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300021401\|Ga0210393_10367901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300021402\|Ga0210385_10681524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300021433\|Ga0210391_10692279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300021474\|Ga0210390_10155660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1926	Open in IMG/M
3300021474\|Ga0210390_10966228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300021474\|Ga0210390_11659950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300021477\|Ga0210398_10128647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2058	Open in IMG/M
3300021477\|Ga0210398_11021302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300021477\|Ga0210398_11058032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300021479\|Ga0210410_10067583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3130	Open in IMG/M
3300021479\|Ga0210410_10078871	All Organisms → cellular organisms → Bacteria	2892	Open in IMG/M
3300022521\|Ga0224541_1024745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300025414\|Ga0208935_1052819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300025922\|Ga0207646_10306767	All Organisms → cellular organisms → Bacteria → Acidobacteria	1434	Open in IMG/M
3300025922\|Ga0207646_10756509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300026215\|Ga0209849_1005486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2041	Open in IMG/M
3300026291\|Ga0209890_10168788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300026315\|Ga0209686_1015954	All Organisms → cellular organisms → Bacteria → Acidobacteria	3046	Open in IMG/M
3300026325\|Ga0209152_10427240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300026330\|Ga0209473_1013901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3897	Open in IMG/M
3300026499\|Ga0257181_1061672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300026552\|Ga0209577_10479226	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300027330\|Ga0207777_1093812	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300027334\|Ga0209529_1013923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300027370\|Ga0209010_1036365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300027535\|Ga0209734_1112729	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300027545\|Ga0209008_1049885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300027575\|Ga0209525_1055637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300027652\|Ga0209007_1160004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300027669\|Ga0208981_1154351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300027738\|Ga0208989_10138609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300027869\|Ga0209579_10443326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300027884\|Ga0209275_10078013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1654	Open in IMG/M
3300027884\|Ga0209275_10238894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300027895\|Ga0209624_10153460	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300027895\|Ga0209624_10953643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300027898\|Ga0209067_10299542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300027903\|Ga0209488_10906682	Not Available	617	Open in IMG/M
3300027986\|Ga0209168_10041149	All Organisms → cellular organisms → Bacteria → Acidobacteria	2507	Open in IMG/M
3300028746\|Ga0302233_10395701	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300028808\|Ga0302228_10432049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300028828\|Ga0307312_10071562	All Organisms → cellular organisms → Bacteria → Acidobacteria	2105	Open in IMG/M
3300028871\|Ga0302230_10437428	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300028906\|Ga0308309_11187147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300029636\|Ga0222749_10273126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300029944\|Ga0311352_11179145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300029951\|Ga0311371_10220952	All Organisms → cellular organisms → Bacteria	2779	Open in IMG/M
3300030007\|Ga0311338_11008374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300030019\|Ga0311348_10939949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300030043\|Ga0302306_10162519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300030057\|Ga0302176_10059913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1466	Open in IMG/M
3300030580\|Ga0311355_10230698	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300030618\|Ga0311354_11661815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300030760\|Ga0265762_1033172	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300030814\|Ga0265741_101632	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300031090\|Ga0265760_10265126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300031232\|Ga0302323_100496194	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300031715\|Ga0307476_10099441	All Organisms → cellular organisms → Bacteria → Acidobacteria	2052	Open in IMG/M
3300031715\|Ga0307476_10656506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300031720\|Ga0307469_12310417	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300032001\|Ga0306922_11530449	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300032180\|Ga0307471_103584190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300032954\|Ga0335083_10346172	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300033475\|Ga0310811_11290346	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300033829\|Ga0334854_063408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.66%
Host-Associated	Host-Associated	1.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.62%
Aquatic	Environmental → Aquatic	6.04%
Plants	Host-Associated → Plants	1.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.22%
Peat	Environmental → Terrestrial → Peat	9.40%
Freshwater	Environmental → Aquatic → Freshwater	4.70%
Sediment	Environmental → Aquatic → Sediment	1.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.67%
Rhizome	Host-Associated → Plants → Rhizome	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.03%
Loam	Environmental → Terrestrial → Soil → Loam	22.15%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.34%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.01%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.01%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.01%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.34%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.34%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.34%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.34%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.34%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.67%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.67%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.67%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100979122	3300001546	Forest Soil	QGSTVFNMPAFYSQISRQFGRVRPFFRYQYINANPSSLFGDVDLRYGPSFGARYDFSDFIAFKAQLDQTMRKGQADLDGLHFQLAFTF*
JGI12635J15846_101387884	3300001593	Forest Soil	MPAFYSQISRRFAHIRPFFRYQYINANPHGIFEDVDLRYGPSFGARYDFTDNIAFKAQLDHTVRKDQPDLNGLQMQVVFTF*
JGI25385J37094_100681851	3300002558	Grasslands Soil	RYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKSKPDLNGLQLQLAFAF*
JGI25383J37093_101453382	3300002560	Grasslands Soil	FQKVSPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKSKPDLNGLQLQLAFAF*
JGI25383J37093_102062362	3300002560	Grasslands Soil	QKVSPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF*
JGI25616J43925_101562251	3300002917	Grasslands Soil	GPIRPFVRYQYVNTSSNNEIYDDIGLRAGPSFGARYDLNDYIAAKAQLNHTMRRGQPDLNGLQLQLAFTF*
rootL2_103619821	3300003322	Sugarcane Root And Bulk Soil	KKLGPHWRPFVRYQYVNANPNSIFEDVALRHGPSFGTRYDFNDNIAFKLQFDHTWRKDQPDLNGLQTQLAFAF*
Ga0066672_106256291	3300005167	Soil	RYQYVNADREDTIFEDAGLRHGPSFGARYDFSDSIAFKAQLDHTVRKALPDLNGLQMQVVFTF*
Ga0066680_108217781	3300005174	Soil	SQTVFNMPAFYSQFSKRFQKVSPFFRYQYANTNPRSIFEEVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF*
Ga0066675_109583581	3300005187	Soil	FYSQVSKRFQKVRPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKGKPDLNGLQLQLAFAF*
Ga0066388_1046872462	3300005332	Tropical Forest Soil	GHIRPYFRYQYVNASAEGFYEDVLLRHGPSFGARYDLSDNVAFKVQLDHTLRKTKPDLNGLQMQLAFTF*
Ga0066686_110713381	3300005446	Soil	QYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKSKPDLNGLQLQLAFAF
Ga0070707_1001771663	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	NVRLNMPAFYSQISKKFGAISPFVRYQYVNANVDSIFEDVLLRHGPSFGVRYEINENMAFKTQLDHTVRKGKGDLNGLHMQLAVTF*
Ga0070707_1018678061	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IRHAEEHTTTVFNMPGFYSQFSKRLGHARPFFRYQYLNMNPNSIFEDILLRYGPSFSARYDLNDNIALKTQLDHTHRKGKPNLNGLQLQLTFAF*
Ga0070735_100904574	3300005534	Surface Soil	ELLNEGFLLRHAELHGPELFDMPAFYVQASRRFGHFRPFVRYQYVNTNPESVFNDVLLRYGPSFGARYDFNTFVAFKAQLDRTVRKNEPDLNGLHLQVAFTF*
Ga0070697_1000543076	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	TVFNMPAFYSQFSKRFQKVSPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF*
Ga0070697_1004791483	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	TVFNMPAFYSQFSKRFQKVSPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNSAFKTQLDHTIRKDKPDLNGLQLQLAFAF*
Ga0066704_103038723	3300005557	Soil	AYQQSSTVYNMPAFYSQISKQFHRVRPFFRYQYINANQGGFLEEFVLRHGPSFGVRFDFNDCIAFKTQLDHTMRKGQPDLNGLHLQLAYTF*
Ga0066699_111666692	3300005561	Soil	FRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKSKPDLNGLQLQLAFAF*
Ga0066708_100811244	3300005576	Soil	YQYINANPGGFLEDIGLRHGPSFGARYDFDDNIGFKAQFDHTLRRDLPDLNGLHLQLAFTF*
Ga0066691_103971472	3300005586	Soil	AFYSQFSRRFGRVRPFFRYQYVNADREDTIFEDAGLRHGPSFGARYDFSDSIAFKAQLDHTVRKALPDLNGLQMQVVFTF*
Ga0070762_100816594	3300005602	Soil	FFRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFIAFKAQLEQTMRKGHADLDGLHFQLAFTF*
Ga0070764_105165741	3300005712	Soil	IRYAYEHSSLLYETPAFYSQISKQFHRFRPYFRYQYINADVGSILDDLDLRYGPSFGARYDFTDSIAFKAQFDHTVRKDEPDLDGLHLQLVFKF*
Ga0066903_1007230132	3300005764	Tropical Forest Soil	VNTNPNSIYHDDVLLRHGPSFGARYDFTDAIGIKTQFDHTIRKGQPDLDGLQMQLVFAF*
Ga0070766_103101223	3300005921	Soil	YSQISKQFGRVRPFFRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFLAFKAQLDQTMRKGQADLDGLHFQLAFTF*
Ga0070766_108282232	3300005921	Soil	AFYSQISKQFHRFRPYFRYQYINADVGSILDDLDLRYGPSFGARYDFTDSIAFKAQFDHTVRKDEPDLDGLHLQLVFKF*
Ga0066788_101792891	3300005944	Soil	FYTQISKQFGHVRPFFRYQYVNTNPRSALHDVLLRYGPSFGARYDFDSNIAFKLQFDHTVRKSLPDLNGIQTQLAFTF*
Ga0070717_112886992	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YQYLNANPNSVFEDILLRYGPSFGARYDLNDNFALKAQLDHTLRKGKPDLNGLQLQLTFAF*
Ga0075014_1001253564	3300006174	Watersheds	QLSKRIDHIRPFFRYQYINASQRSLFRDVGLRHGPSFGARYDLNDNVALKVQLDRTVRQNEPDLNGLQTQLAFTF*
Ga0070765_1013522072	3300006176	Soil	AFYSQISKQFGRIRPFFRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFIAFKAQLDQTMRKGQADLDGLHFQLAFTF*
Ga0070765_1015006161	3300006176	Soil	RPFFRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFIAFKAQLDQTMRKGQVDLDGLHFQLAFTF*
Ga0070765_1020809241	3300006176	Soil	IFNTSAFYSQLSKKLGRVRPFVRYQYINASPRNVLYDDIGLRYGPSFGARFDLNDYLAFKAQLDNTSRRGLPDLSGLHFQVAATF*
Ga0099829_113038412	3300009038	Vadose Zone Soil	QISKQFHRVRPFFRYQYINANQGGFLEEFVLRHGPSFGVRFDFNDSVAFKTQLDHTLRKGQPDLNGLHLQLAFTF*
Ga0099828_109834693	3300009089	Vadose Zone Soil	VRPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF*
Ga0066709_1039605642	3300009137	Grasslands Soil	RLGRLRPFFRYQYVNASPRNVIYDDVGLRYGPSFGARYDLNDYIAFKAQLDHTLRRGKPNLNGMQLQLAFTF*
Ga0116214_11478461	3300009520	Peatlands Soil	LHLNYAVFDTPAFYSQLSKQIGRVRPFFRYQFVNASPNNLIYNDVGLRFGPSFGARYDLNDYIAFKAQLDHTARRAEPDLNGLQLQFAFTF*
Ga0116221_11039281	3300009523	Peatlands Soil	RETRLAAGAVFNIPAFYSQISRRWGRVRPFVRYQYLNASQRNTIFNDVGLRAGPSFGARYDFNDSIAFKAQLDHTQREGLPDLNGLHLQVAFTF*
Ga0116138_10694891	3300009552	Peatland	TPAFYSQISKRIVHIRPFFRYQYINASPNNSIYNDVGLRLGPSFGARYDLNDYIAFTAQLDHTVRRGEPDLNGLQLQWAFTF*
Ga0116127_11069461	3300009618	Peatland	QISKQFHRTRPFFRYQYINADVGGILDDVDLRYGPSFGVRYDFNDSIALKIQLDHTVRKGEPDLNGLHMQLVFKF*
Ga0116134_10342841	3300009764	Peatland	RPYVRYQYINADQGGILDDVDLRYGPSFGVRYDFTDSIAFKTQLDHIVRKGEPDLNGLHMQLVFKF*
Ga0134067_101596191	3300010321	Grasslands Soil	VFNMPAFYSQVSKRFGRVRPFLRYQYINANPGGFLEDIGLRHGPSFGARYDFDDNIGFKAQFDHTLRRDLPDLNGLHLQLAFTF*
Ga0134063_102888181	3300010335	Grasslands Soil	VFNMPVFYSQVSKRFQKVRPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKGKPDLSGLQLQLAFAF*
Ga0074046_102899161	3300010339	Bog Forest Soil	AFYSQFSKQLGRVRPFFRYQYVNASPNTFIFDDIGLRFGPSFGARYNFNDYMAFTAQLDHTVRRGEPDLNGLQLQFAFTF*
Ga0137393_103659991	3300011271	Vadose Zone Soil	DSTTVFNMPGFYSQFSKRFGRSRPFFRYQYLNVNPRSILEDILLRYGPSFGARYDFDDNIAFKAQLDHTVRKGKPDLNALQLQLVFAF*
Ga0137383_103499683	3300012199	Vadose Zone Soil	NTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF*
Ga0137380_116246071	3300012206	Vadose Zone Soil	QTVFNMPAFYSQFSKRFQKVSPFFRYQYANTNPRSIFEEVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF*
Ga0137376_103796091	3300012208	Vadose Zone Soil	MPAFYSQFSKRFQKVSPFFRYQYANTNPRSIFEEVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF*
Ga0150985_1007117883	3300012212	Avena Fatua Rhizosphere	PAFYTLISKHLGPHWRPFFRYQYINANQESSFNDVGLRHGPSFGSRYDFNDNVAFKLQLDHTVRRGLPNLNGLQTQLAFTF*
Ga0137360_105571443	3300012361	Vadose Zone Soil	KRVQKVRPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKGKPDLNGLQLQLAFAF*
Ga0137358_101848111	3300012582	Vadose Zone Soil	YVNANVDTLFEDVLLRHGPSFGVRYDFNGNLAFKTQLDHTFRKGQADLNGLQMQLAVTF*
Ga0137397_112964052	3300012685	Vadose Zone Soil	QFRHAVRPFFRYQYINASAQSVFGDVLLRHGPSAGIRYDFSAGLALKLQLDHTSRKGQDPLNGLQTQLAFTF*
Ga0137396_111562123	3300012918	Vadose Zone Soil	FFRYQYINANQGSFLEDVSLRHGPSFGARYDFNDFIAFEAQLDHTLREGLPDLSGLHFQLAFAF*
Ga0137359_101736611	3300012923	Vadose Zone Soil	RYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF*
Ga0137419_104383653	3300012925	Vadose Zone Soil	FYSQFSRRFGHVRPFFRYQYVHTNAGDTIFDDVGLRYGPSFGARYDFSDNVAFKAQLDHTVRRDQPDLNGLQMQVAFTF*
Ga0137419_105268802	3300012925	Vadose Zone Soil	PAFYSQFSRRFGKVRPFFRYQYVNTNIKSSYHSDVLLRHGPSFGARYDFNESIAFKTQLDHTIRKGKPDLDGLQMQVSFAF*
Ga0137416_103876103	3300012927	Vadose Zone Soil	STVYNMPAFYSQISKQFHRIRPFFRYQYINANQGGFLEEFVLRHGPSFGVRFDFNDCIAFKTQLDHTMRKGQPDLNGLHLQLAYTF*
Ga0137416_113313232	3300012927	Vadose Zone Soil	MPAFYSQISKQFRRIQPFFRYQYVNANRGSFLEDVLLRHGPSFGARYDFNDFIAFEAQLDHTLREGLPDLSGLHFQLAFAF*
Ga0137404_106398702	3300012929	Vadose Zone Soil	LIRHAYEQSPVVYNMPAFYSQVAKQFGRIRPFFRYQYINAHPNGLLEDIALRRGPSFGARFDFNDNIAFKTQLDHILRKGQPDLNGLHLQLAFTF*
Ga0137404_107395491	3300012929	Vadose Zone Soil	RYQYVNANVNSIFEDVLLRHGPSVGVRYEINENMAFKTQLDHTHRKGKGDLNGLHMQLAVTF*
Ga0137407_112305431	3300012930	Vadose Zone Soil	YSQFSKRFGHWRPYVRYQYVNANPNSIFQDVLLRHGPSFGSRYDFNDNVAFKLQLDHTLRKNQPDLNGLQTQLAFTF*
Ga0182018_101379981	3300014489	Palsa	GLTVYDMPAFYSQISKRFGRIRPFFRYQYINANQNSILGDVALRYGPSFGARYDFNDFIAFKAQLDHTLRKGQPDLNGMHLQLAYTF*
Ga0182015_101651132	3300014495	Palsa	VRPFFRFQYVNANSNSNSILNDVGLRFGPSFGVRYDLNEYMAFKAQLDHTVRRGEPDLNGLQLQWAFTF*
Ga0137418_101370284	3300015241	Vadose Zone Soil	VNANPKTIFDDIQLRHGPSFGARYELNENIAFKAQVDHTVRKNKPNLNGLQLQLAFTF*
Ga0134073_100657693	3300015356	Grasslands Soil	SKQFAPVQPFFRFQYLNMNPQSALHEVSLRYGPSFGTRYDFNRQIALKLQFDRTWRKSQPVLNGVQTQLSFAF*
Ga0134072_100039081	3300015357	Grasslands Soil	AFYSQFSKRFQKVSPFFRYHYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKSKPDLNGLQLQLAFAF*
Ga0182035_106255474	3300016341	Soil	MRPFFRYQYVNTNPNSIYHDDVLLRHGPSFGARYDFTDAIAFKIQLDHTIRKGQPDLNGLQMQLAFAF
Ga0187879_103543771	3300017946	Peatland	PIRPFFRYQYMNANSSSNSIFDDVGLRYGPSFGARYDLNDYIAFKAQLDHTVRRGQPDLNGLQLQFAFTF
Ga0187782_110066341	3300017975	Tropical Peatland	AFYSQFSRKIGPIRPFLRYQYINASELNVIYNDISLRYGPSFGARYDFNDYIGFKAQLDHTVRRGEPDLDGLQLQLAFTF
Ga0187869_104299632	3300018030	Peatland	RYQYINADQGGILDDVDLRYGPSFGVRYDFTDSIAFKTQLDHTVRKGESDFDGLHMQLVFKF
Ga0187851_106122262	3300018046	Peatland	MNANSNSNSIFDDVGLRYGPSFGARYDLNDYIAFKAQLDHTVRRGQPDLNGLQLQFAFTF
Ga0187784_106537121	3300018062	Tropical Peatland	PIRPFFRYQYINASALNAIYNDISLRYGPSFGARYDLNDFLAFKAQMDHTVRRGLPDLNALHLQLSGTF
Ga0137408_10316923	3300019789	Vadose Zone Soil	RYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKGKPDLNGLQLQLAFAF
Ga0193731_10965652	3300020001	Soil	QLSRQFRHSIRPYFRYQYINASSQGVFDDVLLRHGPSAGIRYDFNAGLALKLQFDHTNRKGQKPLNGLQTQLAFTF
Ga0193730_11844032	3300020002	Soil	QYINANQNSIFSDVLLRHGPSFGLRYDFNDFVAFKAQFDHMIRKDQPALDGLHLQLAFTF
Ga0193755_12082411	3300020004	Soil	HAYEKSTTVFNMPAFYSQFSKRFGRWRPFVRYQYANANPNSILQDVSLRHGPSFGSRYEFSDNVAFKLQLDHTLRKNQPDLNGLQTQVAFTF
Ga0210403_103846812	3300020580	Soil	MPKTPPIRTFHYQCLNANQGGFLEEFVLHHGPSFGVRFDFNDSDGFKTQLDHTMRKGQPDLGLHLQLAYTF
Ga0210401_102524833	3300020583	Soil	RFGPIRPYFRYQYINANPGSLFKDISLRRGPSFGMRYDFNENFAFKTQFDHTARRGQPDLNALRLQLAFTF
Ga0210401_103139201	3300020583	Soil	QIWRVRPFFRYQYVNANTNVNSIVDDVGLRYGPSFGVRYNLNDYMAFTTQVDHTVRGREPGLNGMQLQFAFTF
Ga0210404_103382751	3300021088	Soil	QYVNANTNVNSIVDDVGLRYGPSFGVRYNLNDYMAFTTQVDHTVRGREPGLNGMQLQFAFTF
Ga0210404_103393172	3300021088	Soil	PAFYSQISRRWGRVRPFVRYQYVNASGRNTIFNDVGLRAGPSFGARYDFNDYVAFKAQLDHTQRESLPDLNGLHLQVAFTF
Ga0210400_107105402	3300021170	Soil	SQFSKQLGRVRPFFRYQYVNANSNPNSIFDDVGLRYGPSFGARYDLNSFIAFTAQLDHTARGGEPDLNGLQLQFAFTF
Ga0210400_108556812	3300021170	Soil	AFYSQISKQFRRLRPFFRYQYINANQKGLFEDVALRHGPSFGARYDFNDFIAFKAQLDHTLRKGLPDLNGLHLQLAFTF
Ga0210405_109831282	3300021171	Soil	HHIRPFFRYQYINANQNGLFEDVTLRYGPSFGVRYDFNDSVAFKTQFDHTLRKVQPDLNGLHTQLVFTF
Ga0210396_109231682	3300021180	Soil	GDVFNMPAFYSQFSRRIGRVRPFFRYQYINANPGSIFEDVALRYGPSFGARFDFTDSIAFKGQLDHTVRKDQPDLNGLQMQVAFAF
Ga0210393_103679011	3300021401	Soil	YINANPGSMLKDISVRRGPSFGMRYDFNENFAFKTQFDHTARKGQADLNALHLQLAFTF
Ga0210385_106815242	3300021402	Soil	KKLGRVRPFVRYQYINASPRNVLYDDIGLRYGPSFGARFDLNDYLAFKAQLDNTSRRGLPDLSGLHFQVAATF
Ga0210391_106922791	3300021433	Soil	LIRHAYDQNATVFNMPAFYSQISKQFGRVRRFFRYQYINANPGSLFRDVDLRYGSSFGARYDFDDFIAFKAQLDQTERKGQADLDGLHFQLAFTF
Ga0210390_101556601	3300021474	Soil	FYSQISKQFGRIRPFFRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFIAFKAQLDQTMRKGQADLDGLHFQLAFTF
Ga0210390_109662281	3300021474	Soil	KQIHHLRPFFRFQYVNATSNNLIYDDVGLRLGPSFGARYDLNDYMAFTAQLDHTVRRDLPDLNGLQLQWAFTF
Ga0210390_116599501	3300021474	Soil	QYVNANSNVNSVIDDVGLRYGPSFGVRYDLNDYMAFTTQLDHTVRGGQPDLNGLQLQFAFTF
Ga0210398_101286474	3300021477	Soil	FRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFIAFKAQLEQTMRKGHADLDGLHFQLAFTF
Ga0210398_110213021	3300021477	Soil	FHRIRPFVRYQYINADAGGILDNLDLRYGPSFGVRYDFTDSIAFKVQADHTVRKGEPDLNGLHMQLVFKF
Ga0210398_110580322	3300021477	Soil	PFFRYQYVNASPNNSLYDDVGLRYGPSFGARYDFNDYIAFKAQLDHTVRRGEPDLNGLHLQLAFTF
Ga0210410_100675831	3300021479	Soil	FRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFIAFKAQLDQTVRKGQVDLDGLHFQLAFTF
Ga0210410_100788715	3300021479	Soil	PAFYSQFSKRFGHIRPFFRYQYVNTNKEDTIFDDVGLRYGPSFGARYDFNDNIALKAQLDHTLRKGQPDLNGLNLQLVFNF
Ga0224541_10247452	3300022521	Soil	RYQYVNASPNNGIYDDVGLRFGPSFGARYDLNDYIAFKAQFDHTVRRGERDLNGLHLQFAFTF
Ga0208935_10528192	3300025414	Peatland	GRVRPFFRYQYVNASPSNLIYNDVGLRYGPSFGARYDLNDYIAFKAQLDHTVRRDEPDLNGLQLQLAFTF
Ga0207646_103067671	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ISPFVRYQYVNANVDSIFEDVLLRHGPSFGVRYEINENMAFKTQLDHTVRKGKGDLNGLHMQLAVTF
Ga0207646_107565093	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SQVSKRLGHIRPFFRYQYLNVNPRSILEDILLRYGPSFGARYDFDDNIAFKAQLDHTVRKGKPDLNALQLQLVFAF
Ga0209849_10054864	3300026215	Soil	FYTQISKQFGHVRPFFRYQYVNTNPRSALHDVLLRYGPSFGARYDFDSNIAFKLQFDHTVRKSLPDLNGIQTQLAFTF
Ga0209890_101687882	3300026291	Soil	YTQVSKRIGHIRPFFRYQYINASQRSLFWDVGLRHGPSFGARYDLSDNVAFKVQLDHTVRQTQPDLNGLQTQLAFTF
Ga0209686_10159541	3300026315	Soil	RFQKVSPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKSKPDLNGLQLQLAFAF
Ga0209152_104272401	3300026325	Soil	AFYSQVSKRVQKVRPFFRYQYANTNPRSIFEDVLLRHGPSFGARYDFNDNIAFKTQLDHTIRKDKPDLNGLQLQLAFAF
Ga0209473_10139016	3300026330	Soil	PGAYTLISKQFGHVRPFFRFQYLNMNPQSALHDVLLRYGPSFGTGYDFNRQIALKLQFDRTWRKSQLVLNGVQTQLSFAF
Ga0257181_10616721	3300026499	Soil	MPAFYSQISKQFHRVRPFFRYQYINANQGGFLEEFLLRHGPSFGVRFDFNDSVAFKTQLDHTLRKGQPDLNGLHLQLAFTF
Ga0209577_104792263	3300026552	Soil	STVFNMPAFYSQVSKRFGRVRPFLRYQYINANPGGFLEDIGLRHGPSFGARYDFDDNIGFKAQFDHTLRRDLPDLNGLHLQLAFTF
Ga0207777_10938122	3300027330	Tropical Forest Soil	VFNTPAFCSQLSKKFGRLRPFFRYQYINANEKSIFEDVGLRYGPSFGGRYDFNEAVAFKAQLDHTIRDRKPDLNGLHMQLAFTF
Ga0209529_10139233	3300027334	Forest Soil	KQVGHFRPFFRYQYVNASSNDSIYNDVGLRFGPSFGARYDLNEYVAFKAQLDHTARRDEPDLNGLQLQLAFTF
Ga0209010_10363652	3300027370	Forest Soil	SKQFGHIRPFFRYQYVNASSNNSLYDDVGLRYGPSFGARYDFNDYIAFKAQLDHTVRRDEPDLNGLHLQLAFTF
Ga0209734_11127292	3300027535	Forest Soil	RVAFNMPAFYSQISKRFGRVRPFFRYQYVNANPHSAFEDVDLRYGPSFGARYDFNDNIAFKAQLDHTVRKGQPDLNGLQLQLAFAF
Ga0209008_10498851	3300027545	Forest Soil	GRVRPFFRYQYINANPGSLFRDVDLRYGSSFGARYDFDDFIAFKAQLDQTERKGQADLDGLHFQLAFTF
Ga0209525_10556371	3300027575	Forest Soil	EGFLIRHAYEQGSTVFNMPAFYSQISKQFGRVRPFFRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFIAFKAQLDQTIRKGQADLDALHFQLAFTF
Ga0209007_11600042	3300027652	Forest Soil	ISRQFGRVRPFFRYQYINANPSSLFGDVDLRYGPSFGARYDFSDFIAFKAQLDQTMRKGQADLDGLHFQLAFTF
Ga0208981_11543512	3300027669	Forest Soil	TVYNMPAFYSQISRQFHRARPFFRYQYINANQGGFLEEFVLRHGPSFGVRFDFNDSVAFKTQLDHTMRKGQPDLNGLHLQLAYTF
Ga0208989_101386092	3300027738	Forest Soil	NAPAFYVQISKQLGHIRPFLRCQYVNADKASIFDDVRLRYGPSFGARYDFNENIAFKAQLDHTVRENMPDLNGLQMQTAFTF
Ga0209579_104433261	3300027869	Surface Soil	RRFGHFRPFVRYQYVNTNPESVFNDVLLRYGPSFGARYDFNTFVAFKAQLDRTVRKNEPDLNGLHLQVAFTF
Ga0209275_100780131	3300027884	Soil	SQISKQFGRVRPFFRYQYINANPNSLFGDVDLRYGPSFGARYDLNDFIAFKAQLDQTVRKGHADLDALHFQLAFTF
Ga0209275_102388941	3300027884	Soil	QFSRAFGAIRPFIRYQYVNASLENPIYDDVGLRYGPSFGARYDANDYIALKVQLDRLARRGLPDLSGLHFQLSGTF
Ga0209624_101534603	3300027895	Forest Soil	ISKQFGHIRPFFRYQYVNASPNNSLYDDVGLRYGPSFGARYDFNDYIAFKAQLDHTVRRGEPDLNGLHLQLAFTF
Ga0209624_109536432	3300027895	Forest Soil	RHAYEQGSTVFNMPAFYSQISKQFGRVRPFFRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFIAFKAQLDQTIRKGQADLDALHFQLAFTF
Ga0209067_102995423	3300027898	Watersheds	PFLRYQYVNTNPGSVFEDVLLRHGPSFGSRYDLNDYVAFTAQLDHTLRKGQPDLNGLQLQFAFTF
Ga0209488_109066822	3300027903	Vadose Zone Soil	HHNLVFNMPAFYVQLSKQFGHIRPFFRYEYANANKEDTIFDDVGLRYGPSFGARYDFNESIAFKLQLNHTDRKDMPDLNGLQTQIAFAF
Ga0209168_100411495	3300027986	Surface Soil	RYQYVNASGRNTIFNDVGLRAGPSFGARYDFNDYVAFKAQLDHTQRESLPDLNGLHLQVAFTF
Ga0302233_103957012	3300028746	Palsa	YSQISKQFGHIRPFFRYQYVNASPNNFIYDDVGLRYGPSFGARYDLNDYIAFKAQLDHTVRRDEPDLNGLQLQLAFTF
Ga0302228_104320492	3300028808	Palsa	RYQYINADVGGVLDDLDLRYGPSFGVRYDFTDSIAFKTQFDHTVRKDEPDLDGLHTQLVFKF
Ga0307312_100715623	3300028828	Soil	WRPFVRYQYANANPNSILQDVSLRHGPSFGSRYEFSDNVAFKLQLDHTLRKNQPDLNGLQTQVAFSF
Ga0302230_104374281	3300028871	Palsa	SQFSKQLGRVRPFFRYQYVNANSNPNSIYDDVGLRFGPSFGARYDLNDYMAFTAQLDHTVRRGEPDLNGLQLQWAFTF
Ga0308309_111871472	3300028906	Soil	YVSANSNPTSIFDDVGLRYGPSFGARYDLNSFIAFTAQLDHTARGGEPDLNGLQLQFAFT
Ga0222749_102731261	3300029636	Soil	RFGHIRPFFRYQYVNMNRNETIFDDVGLRYGPSFGARYDFDDNIAFKAQLDHTVRGGEPNLNGLQLQLAFTF
Ga0311352_111791451	3300029944	Palsa	VRPFVRYQYINASPQNAIYNDVGLRYGPSFGLRYDANDYIALKAQLDHTVRRGLPDLNGLHLQLAGTF
Ga0311371_102209521	3300029951	Palsa	IGGSLHFDQPAFYSQFSKQLGRLRPFFRYQYVNANSNSNAILDDVGLRYGPSFGARFDLNNYIAFKAQLDHTARAGEPDLNGLQLQFAFTF
Ga0311338_110083743	3300030007	Palsa	VNASPNNGIYDDIGLRFGPSFGARYDLNDYIAFKAQLDHTVRRGEPDLNGLQLQLAFTF
Ga0311348_109399491	3300030019	Fen	SRSFARYRPFFRYQYINANQNSIFEDVSLRHGPSFDARYDFNDSVALKAQLDHTFRKGQPDLNGLQLQFAFTF
Ga0302306_101625192	3300030043	Palsa	PAFYSQFSKQLGPVRPFFRYQYVNASPNNGIYDDVGLRFGPSFGARYDLNDYIAFKAQFDHTVRRGERDLNGLHLQFAFTF
Ga0302176_100599133	3300030057	Palsa	QYVNASPNNFIYDDVGLRYGPSFGARYDLNDYIAFKAQLDHTVRRDEPDLNGLQLQLAFT
Ga0311355_102306981	3300030580	Palsa	KQFHRVRPYFRYQYINADVGGVLDDLDLRYGPSFGVRYDFTDSIAFKTQFDHTVRKDEPDLDGLHTQLVFKF
Ga0311354_116618152	3300030618	Palsa	PFFRYQYVNANSNRNAILDDVGLRYGPSFGARFDLNNYIAFKAQLDHTARAGEPDLNGLQLQFAFTF
Ga0265762_10331723	3300030760	Soil	VNASSNNSLYDDVGLRYGPSFGARYDFDDYIAFKAQLDHTVRRDEPDLNGLHLQLAFTF
Ga0265741_1016321	3300030814	Soil	QYVNASSNNSLYDDVGLRYGPSFGARYDFNDYIAFKAQLDHTVRRGEPDLNGLHLQLSFT
Ga0265760_102651262	3300031090	Soil	QISKQFGRIRPFFRYQYINANPSSLFGDVDLRYGPSFGARYDFNDFIAFKAQLDQTMRKGQADLDGLHFQLAFTF
Ga0302323_1004961943	3300031232	Fen	SFYAQISKSFARYRPFFRYQYVNANQNSIFEDVSLRHGPSFGARYDFNDSVALKAQLDHTFRKGKPDLNGLQLQFAFTF
Ga0307476_100994415	3300031715	Hardwood Forest Soil	LRFQYVNASPRNVIYDDVSLRYGPSFGARYELNDYVAFKAQLDRTSRRGLPNLNGLHLQLSGTF
Ga0307476_106565062	3300031715	Hardwood Forest Soil	KQFGRVRPFFRYQYINANPNSLFGDVDLRYGPSFGARYDLNDFIAFKAQLDQTVRKGHADLDALHFQLAFTF
Ga0307469_123104172	3300031720	Hardwood Forest Soil	SKKIGRIRPFFRYQYVNAAVNDSIYDDVGLRLGPAFGARYDFNDYMAFTAQLDHTVRRGLPDLNGLQLQWAFTF
Ga0306922_115304493	3300032001	Soil	QYVNTNPNSIYHDDVLLRHGPSFGARYDFTDAIAFKIQLDHTIRKGQPDLNGLQMQLAFA
Ga0307471_1035841902	3300032180	Hardwood Forest Soil	NVFNMPAFYSQVSERVHHFRPFFRYQYVNANPQSIFEDVLLRHGPSFGTRYDFDDFIAFTAQLDHTARKGQPGLNGLQLQFAFTF
Ga0335083_103461723	3300032954	Soil	QYINANPGSVLEDISLRHGPSFGARYDFSDNIAFKTQLDHTLRKGQPDLNGLHLQLAFAF
Ga0310811_112903461	3300033475	Soil	TQFSRQFGRISPYFRYQYINANPQSMYDDVKLRHGPSFGARYDFNANIGFKAQLDHTLRKNLPDLNGLHLQLVFAF
Ga0334854_063408_2_205	3300033829	Soil	PFFRYQYVNANSNPNSIFDDVGLRYGPSFGVRYDPNNYIALKAQLDHTAREGQPDLNGLQLQFAFTF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047841

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences