Metagenome / Metatranscriptome Family F047822

Basic Information
Family ID	F047822
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	86 residues
Representative Sequence	MPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Number of Associated Samples	137
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	36.88 %
% of genes near scaffold ends (potentially truncated)	40.27 %
% of genes from short scaffolds (< 2000 bps)	79.87 %
Associated GOLD sequencing projects	128
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (57.718 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.409 % of family members)
Environment Ontology (ENVO)	Unclassified (34.228 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.691 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.76% β-sheet: 0.00% Coil/Unstructured: 28.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF07486	Hydrolase_2	10.74
PF04367	DUF502	3.36
PF14023	DUF4239	2.01
PF04828	GFA	2.01
PF12244	DUF3606	2.01
PF09361	Phasin_2	2.01
PF00226	DnaJ	1.34
PF07681	DoxX	0.67
PF05239	PRC	0.67
PF00775	Dioxygenase_C	0.67
PF08239	SH3_3	0.67
PF00012	HSP70	0.67
PF01012	ETF	0.67
PF04519	Bactofilin	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	10.74
COG2928	Uncharacterized membrane protein	Function unknown [S]	3.36
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.01
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.67
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.67
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.67
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	0.67
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.67
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.67
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
All Organisms	root	All Organisms	42.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
cellular organisms	root	All Organisms → cellular organisms	42.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	35.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	7.38 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	6.04 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.70 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	7.38 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	6.04 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	4.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.72 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	7.38 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	6.04 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	4.70 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17364849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2719	Open in IMG/M
3300000891\|JGI10214J12806_10161198	Not Available	702	Open in IMG/M
3300005328\|Ga0070676_10213671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1270	Open in IMG/M
3300005328\|Ga0070676_10684409	Not Available	747	Open in IMG/M
3300005330\|Ga0070690_100015048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4605	Open in IMG/M
3300005332\|Ga0066388_101281044	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300005335\|Ga0070666_10003228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9900	Open in IMG/M
3300005337\|Ga0070682_100055151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2496	Open in IMG/M
3300005339\|Ga0070660_100854019	Not Available	767	Open in IMG/M
3300005341\|Ga0070691_10924317	Not Available	540	Open in IMG/M
3300005353\|Ga0070669_100154794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1777	Open in IMG/M
3300005354\|Ga0070675_100281172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1462	Open in IMG/M
3300005355\|Ga0070671_100032810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4292	Open in IMG/M
3300005366\|Ga0070659_100033050	All Organisms → cellular organisms → Bacteria	4017	Open in IMG/M
3300005367\|Ga0070667_100125293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2238	Open in IMG/M
3300005436\|Ga0070713_101468066	Not Available	662	Open in IMG/M
3300005437\|Ga0070710_11348796	Not Available	532	Open in IMG/M
3300005438\|Ga0070701_10049307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2177	Open in IMG/M
3300005438\|Ga0070701_10953803	Not Available	596	Open in IMG/M
3300005441\|Ga0070700_101916978	Not Available	512	Open in IMG/M
3300005444\|Ga0070694_100683191	Not Available	833	Open in IMG/M
3300005455\|Ga0070663_100024727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4046	Open in IMG/M
3300005455\|Ga0070663_101596575	Not Available	581	Open in IMG/M
3300005456\|Ga0070678_101543562	Not Available	622	Open in IMG/M
3300005466\|Ga0070685_10259028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1156	Open in IMG/M
3300005468\|Ga0070707_100234050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1788	Open in IMG/M
3300005471\|Ga0070698_100675576	Not Available	974	Open in IMG/M
3300005543\|Ga0070672_100230524	Not Available	1556	Open in IMG/M
3300005544\|Ga0070686_100113121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1852	Open in IMG/M
3300005545\|Ga0070695_100011301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	5340	Open in IMG/M
3300005564\|Ga0070664_102074104	Not Available	540	Open in IMG/M
3300005764\|Ga0066903_106924447	Not Available	588	Open in IMG/M
3300006175\|Ga0070712_100132748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1889	Open in IMG/M
3300006194\|Ga0075427_10050226	Not Available	717	Open in IMG/M
3300006196\|Ga0075422_10331910	Not Available	659	Open in IMG/M
3300006237\|Ga0097621_100900416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	824	Open in IMG/M
3300006847\|Ga0075431_100461646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1264	Open in IMG/M
3300006903\|Ga0075426_10125479	Not Available	1845	Open in IMG/M
3300006954\|Ga0079219_10004321	All Organisms → cellular organisms → Bacteria	4185	Open in IMG/M
3300007076\|Ga0075435_100182555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1773	Open in IMG/M
3300009092\|Ga0105250_10264195	Not Available	738	Open in IMG/M
3300009093\|Ga0105240_11249265	Not Available	785	Open in IMG/M
3300009093\|Ga0105240_12352978	Not Available	552	Open in IMG/M
3300009147\|Ga0114129_12982648	Not Available	557	Open in IMG/M
3300009148\|Ga0105243_10515179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1136	Open in IMG/M
3300009156\|Ga0111538_12521258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300009162\|Ga0075423_10264985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1800	Open in IMG/M
3300009551\|Ga0105238_10183760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2067	Open in IMG/M
3300009551\|Ga0105238_10418160	Not Available	1335	Open in IMG/M
3300009553\|Ga0105249_10305176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1598	Open in IMG/M
3300010048\|Ga0126373_12268667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	603	Open in IMG/M
3300010358\|Ga0126370_10142662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1734	Open in IMG/M
3300010360\|Ga0126372_11178795	Not Available	789	Open in IMG/M
3300010366\|Ga0126379_11091587	Not Available	904	Open in IMG/M
3300010375\|Ga0105239_10659194	Not Available	1195	Open in IMG/M
3300010376\|Ga0126381_102517700	Not Available	737	Open in IMG/M
3300010396\|Ga0134126_11365688	Not Available	784	Open in IMG/M
3300010398\|Ga0126383_11638987	Not Available	733	Open in IMG/M
3300010400\|Ga0134122_10013819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	6030	Open in IMG/M
3300010403\|Ga0134123_10008218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	7015	Open in IMG/M
3300012354\|Ga0137366_10649086	Not Available	755	Open in IMG/M
3300012884\|Ga0157300_1032306	Not Available	752	Open in IMG/M
3300012891\|Ga0157305_10036775	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012891\|Ga0157305_10075012	Not Available	784	Open in IMG/M
3300012892\|Ga0157294_10002919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2428	Open in IMG/M
3300012896\|Ga0157303_10119665	Not Available	666	Open in IMG/M
3300012897\|Ga0157285_10081207	Not Available	857	Open in IMG/M
3300012905\|Ga0157296_10251426	Not Available	593	Open in IMG/M
3300012915\|Ga0157302_10528084	Not Available	515	Open in IMG/M
3300012916\|Ga0157310_10481855	Not Available	535	Open in IMG/M
3300012957\|Ga0164303_10680793	Not Available	690	Open in IMG/M
3300012958\|Ga0164299_10055595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1873	Open in IMG/M
3300012971\|Ga0126369_12215189	Not Available	637	Open in IMG/M
3300012985\|Ga0164308_10188206	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300013100\|Ga0157373_10192447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1437	Open in IMG/M
3300013102\|Ga0157371_10016498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5510	Open in IMG/M
3300013105\|Ga0157369_10050811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4488	Open in IMG/M
3300013307\|Ga0157372_10164975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2561	Open in IMG/M
3300014497\|Ga0182008_10814231	Not Available	543	Open in IMG/M
3300014968\|Ga0157379_10980983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300014968\|Ga0157379_11073834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	770	Open in IMG/M
3300015371\|Ga0132258_11649463	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300015373\|Ga0132257_101710533	Not Available	807	Open in IMG/M
3300016270\|Ga0182036_10225863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1388	Open in IMG/M
3300016319\|Ga0182033_10034830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3261	Open in IMG/M
3300016357\|Ga0182032_10660555	Not Available	875	Open in IMG/M
3300016387\|Ga0182040_11089926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	669	Open in IMG/M
3300018028\|Ga0184608_10292213	Not Available	716	Open in IMG/M
3300019356\|Ga0173481_10020727	All Organisms → cellular organisms → Bacteria	1998	Open in IMG/M
3300019361\|Ga0173482_10381831	Not Available	649	Open in IMG/M
3300019362\|Ga0173479_10201648	Not Available	840	Open in IMG/M
3300019362\|Ga0173479_10688734	Not Available	549	Open in IMG/M
3300020070\|Ga0206356_11495337	Not Available	597	Open in IMG/M
3300020078\|Ga0206352_10605149	Not Available	590	Open in IMG/M
3300021560\|Ga0126371_10573296	Not Available	1277	Open in IMG/M
3300021560\|Ga0126371_12508826	Not Available	624	Open in IMG/M
3300022889\|Ga0247785_1022503	Not Available	707	Open in IMG/M
3300022892\|Ga0247753_1038289	Not Available	590	Open in IMG/M
3300022899\|Ga0247795_1103318	Not Available	510	Open in IMG/M
3300023066\|Ga0247793_1056110	Not Available	638	Open in IMG/M
3300023071\|Ga0247752_1029481	Not Available	808	Open in IMG/M
3300023077\|Ga0247802_1080227	Not Available	550	Open in IMG/M
3300023261\|Ga0247796_1118310	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300025885\|Ga0207653_10228258	Not Available	709	Open in IMG/M
3300025905\|Ga0207685_10066556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1446	Open in IMG/M
3300025906\|Ga0207699_11410203	Not Available	515	Open in IMG/M
3300025912\|Ga0207707_10818940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	775	Open in IMG/M
3300025916\|Ga0207663_10054278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2508	Open in IMG/M
3300025918\|Ga0207662_10020522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	3771	Open in IMG/M
3300025920\|Ga0207649_10352136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1090	Open in IMG/M
3300025925\|Ga0207650_10688240	Not Available	863	Open in IMG/M
3300025928\|Ga0207700_11350601	Not Available	634	Open in IMG/M
3300025931\|Ga0207644_10213279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1527	Open in IMG/M
3300025933\|Ga0207706_10039182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4201	Open in IMG/M
3300025949\|Ga0207667_10225318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1920	Open in IMG/M
3300025972\|Ga0207668_11800507	Not Available	552	Open in IMG/M
3300026067\|Ga0207678_10518730	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300026078\|Ga0207702_10193494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1881	Open in IMG/M
3300026078\|Ga0207702_12004885	Not Available	569	Open in IMG/M
3300026118\|Ga0207675_100230193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1788	Open in IMG/M
3300027909\|Ga0209382_12125742	Not Available	534	Open in IMG/M
3300031538\|Ga0310888_10284845	Not Available	939	Open in IMG/M
3300031545\|Ga0318541_10600084	Not Available	616	Open in IMG/M
3300031573\|Ga0310915_10800403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	663	Open in IMG/M
3300031682\|Ga0318560_10572075	Not Available	612	Open in IMG/M
3300031719\|Ga0306917_10509809	Not Available	945	Open in IMG/M
3300031744\|Ga0306918_10216741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1449	Open in IMG/M
3300031744\|Ga0306918_11389613	Not Available	538	Open in IMG/M
3300031771\|Ga0318546_10835938	Not Available	648	Open in IMG/M
3300031833\|Ga0310917_10265679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1157	Open in IMG/M
3300031910\|Ga0306923_10823761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1023	Open in IMG/M
3300031941\|Ga0310912_10389858	Not Available	1084	Open in IMG/M
3300031942\|Ga0310916_10196818	Not Available	1685	Open in IMG/M
3300031945\|Ga0310913_10628754	Not Available	761	Open in IMG/M
3300031954\|Ga0306926_10691137	Not Available	1238	Open in IMG/M
3300032000\|Ga0310903_10792952	Not Available	518	Open in IMG/M
3300032035\|Ga0310911_10703992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	585	Open in IMG/M
3300032059\|Ga0318533_10175024	Not Available	1528	Open in IMG/M
3300032122\|Ga0310895_10394581	Not Available	676	Open in IMG/M
3300032205\|Ga0307472_101124834	Not Available	745	Open in IMG/M
3300033551\|Ga0247830_11332997	Not Available	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.09%
Host-Associated	Host-Associated	36.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.42%
Plants	Host-Associated → Plants	36.91%
Aquatic	Environmental → Aquatic	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.37%
Sediment	Environmental → Aquatic → Sediment	0.67%
Roots	Host-Associated → Plants → Roots	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.45%
Loam	Environmental → Terrestrial → Soil → Loam	16.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.67%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.04%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.67%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.34%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03703340	2088090014	Soil	MPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ
JGI10214J12806_101611982	3300000891	Soil	AKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ*
Ga0062593_1018137511	3300004114	Soil	ECDALFALADTWKRLAAELEADQRLLQVLSELHLSSQPHEALLIALNIHPGLKWPLQKTG
Ga0070676_102136711	3300005328	Miscanthus Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG*
Ga0070676_106844091	3300005328	Miscanthus Rhizosphere	VPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070690_1000150481	3300005330	Switchgrass Rhizosphere	MPGNPHECRLNAAHCLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG*
Ga0066388_1012810442	3300005332	Tropical Forest Soil	MPGNPHECRLNAAHCSKLAQNAVTSECDALFTLADTWKRLAAECEADQRLLQVLSELDLSAQPYEAFLFALNIHSGLKWPSRKKA*
Ga0070666_100032286	3300005335	Switchgrass Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070682_1000551511	3300005337	Corn Rhizosphere	SELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG*
Ga0070660_1008540191	3300005339	Corn Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQK
Ga0070691_109243171	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHP
Ga0070668_1005260511	3300005347	Switchgrass Rhizosphere	VTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070669_1001547941	3300005353	Switchgrass Rhizosphere	HECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070675_1002811723	3300005354	Miscanthus Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG*
Ga0070671_1000328102	3300005355	Switchgrass Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070659_1000330509	3300005366	Corn Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ*
Ga0070667_1001252933	3300005367	Switchgrass Rhizosphere	MPGNPHECRLNAAHCLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ*
Ga0070713_1014680662	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SKVFPTCHTKRAINPVAQRLGNCMTGQWVAGLIVIDDPGEEHAGQSSRMPPQCSALFRAGKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070710_113487961	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070701_100493074	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	AKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070701_109538031	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPS
Ga0070700_1019169782	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070694_1006831912	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLK
Ga0070663_1000247279	3300005455	Corn Rhizosphere	SMTREKNMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070663_1015965751	3300005455	Corn Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ*
Ga0070678_1015435621	3300005456	Miscanthus Rhizosphere	ECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070685_102590281	3300005466	Switchgrass Rhizosphere	PGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070707_1002340503	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTLKTPRQKPDGKLANAFSISSQ*
Ga0070698_1006755762	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG*
Ga0070672_1002305241	3300005543	Miscanthus Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG*
Ga0070686_1001131214	3300005544	Switchgrass Rhizosphere	EKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0070695_1000113019	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG*
Ga0070664_1020741041	3300005564	Corn Rhizosphere	LAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0066903_1069244472	3300005764	Tropical Forest Soil	MPGNPHECRLNAAQCSKLAKAAVTSECDALFALADTWKRLAAELEADQKLLEVLSELDLSSQPYEAFLFALNIHPGLKWPSQKAG*
Ga0070712_1001327484	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG*
Ga0075427_100502262	3300006194	Populus Rhizosphere	REKNMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0075422_103319102	3300006196	Populus Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSLQPYEAFLFALNIHPGLKWPSQKTG*
Ga0097621_1009004161	3300006237	Miscanthus Rhizosphere	GNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0075431_1004616461	3300006847	Populus Rhizosphere	ELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0075425_1015282141	3300006854	Populus Rhizosphere	LAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTD*
Ga0075426_101254792	3300006903	Populus Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTD*
Ga0079219_100043214	3300006954	Agricultural Soil	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALKIHPGLKWPSQKTG*
Ga0075435_1001825553	3300007076	Populus Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKCLRKRLIKDTLPKA*
Ga0105250_102641951	3300009092	Switchgrass Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0105240_112492652	3300009093	Corn Rhizosphere	PGNPHECRLNAAHCSELAKTVVTSECQVLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG*
Ga0105240_123529781	3300009093	Corn Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSAQPYEAFLFALNIHPGMKWPSQKTG*
Ga0114129_128067881	3300009147	Populus Rhizosphere	TVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0114129_129826481	3300009147	Populus Rhizosphere	TVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSLQPYEAFLFALNIHPGLKWPSQKTG*
Ga0105243_105151791	3300009148	Miscanthus Rhizosphere	NMPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0111538_125212582	3300009156	Populus Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHHGLKWPSQKTG*
Ga0075423_102649853	3300009162	Populus Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTD*
Ga0105238_101837601	3300009551	Corn Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ*
Ga0105238_104181603	3300009551	Corn Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNI
Ga0105249_103051762	3300009553	Switchgrass Rhizosphere	LPGNPHECRVNAAQCSKLAQNAITSECDAFVALAKTWKKLAAELEADQMLLQALSELHLTSQPYEALLCALNIHPGLNWPLPKKANDALASRQQEP*
Ga0126373_122686671	3300010048	Tropical Forest Soil	MTIHDPEGNMPGNPHECRLNAAQCSQLAKKAVTSECDALFALADTWKRLAAELEADQKLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKAG*
Ga0126370_101426623	3300010358	Tropical Forest Soil	MTIHDPEGNMPGNPHECRLNAAQCSKLAKTAVTSECDALFALADTWKRLAAELEADQKLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQNAG*
Ga0126372_111787951	3300010360	Tropical Forest Soil	MTIHDPEGNMPGNPHECRLNAAQCSKLAQSAVTSECDALFALADTWKRLAAELEADQKLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKAG*
Ga0126379_110915872	3300010366	Tropical Forest Soil	MTIHDPEGNMPGNPHECRLNAAQCSKLAKTAVTSECDALFALADTWKRLAAELEADQKLLEVLSELDLSSQPYEAFLFALNIHPGLKWPSQKAG*
Ga0134125_119354501	3300010371	Terrestrial Soil	AKTVVTSECQSLLVLADTWKRLAAELEADQSLLQGLSELDLSAQPYEAFLFALNIHPGLKWPSQKTG*
Ga0105239_106591941	3300010375	Corn Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQSLLVFADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0126381_1025177002	3300010376	Tropical Forest Soil	MTIHDPEGNMPGNPHECRLNAAQCSKLAKTAVTSECDALFALADTWKRLAAELEADQKLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0134126_113656881	3300010396	Terrestrial Soil	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG*
Ga0126383_116389871	3300010398	Tropical Forest Soil	MTIHDPEGNMPGNPHECRLNAAQCSKLAKTAVTSECDALFALADTWKRLAAELEADQKLLQVLSELDLSSQPYEAFLFALNIHPGLKWPLQKAG*
Ga0134122_100138191	3300010400	Terrestrial Soil	MTREKNMPGNPHECRLNAAHCLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0134123_100082181	3300010403	Terrestrial Soil	MTREKNVPGNPHECRLNAAHCSELAKTVVASECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0137366_106490861	3300012354	Vadose Zone Soil	MTREGKMPGNPQECRLNAAQCSKLAQTAVTSECQALIALAETWKRLAAELEADQMLLQVLWDLDLSLQPYEALLFALNIHSAMKWPSAAR*
Ga0157300_10323062	3300012884	Soil	PGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG*
Ga0157305_100367752	3300012891	Soil	MTGQWVAGLIVIDDPGEKHAGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0157305_100750122	3300012891	Soil	MTREGNMPGNPHECRVKPPQCSKLAQNAITSECDAFFALADTWKRLAAELEADQMLLQALSELHLTSQPYEALLCALNIHPGP
Ga0157294_100029192	3300012892	Soil	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHHGLKWPSQKTG*
Ga0157303_101196651	3300012896	Soil	MIREKNVPGSPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQP
Ga0157285_100812071	3300012897	Soil	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSEFELDLSSQPYEAFLFALNIHPGMKWPSQKTG*
Ga0157288_101230501	3300012901	Soil	ITSECDALFALANTWKRLAAELEADQMLLQALSELHLTSQPYEALLCALNIHPGLNWPLPKKPNCRPSE*
Ga0157296_102514262	3300012905	Soil	MTREKNVPGNPHECRLNAAHCSELAKTVVTAECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWFSKKTG*
Ga0157302_105280842	3300012915	Soil	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIH
Ga0157310_104818551	3300012916	Soil	MTREKNMPGNPHECRLNAAHCSELAKTVVASECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0164303_106807931	3300012957	Soil	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLSEPRSRSISEPAQPHR
Ga0164299_100555952	3300012958	Soil	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAVQFALNIHPGLKWPSQKTG*
Ga0126369_122151891	3300012971	Tropical Forest Soil	MTIYDPEGNMPGNPHECRLNAAQCSKLAKTAVTSECDALFALADTWKRLAAELEADQKLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKAG*
Ga0164308_101882063	3300012985	Soil	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTVKDTSPKA*
Ga0157373_101924473	3300013100	Corn Rhizosphere	CSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG*
Ga0157371_100164983	3300013102	Corn Rhizosphere	MTREKNMPGNPHECRLNAAHCLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG*
Ga0157369_100508119	3300013105	Corn Rhizosphere	PGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0157372_101649755	3300013307	Corn Rhizosphere	PGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSHPYEAFQFALNIHPGLKWPSQKTG*
Ga0182008_108142311	3300014497	Rhizosphere	MTREKNMPGNPHECRLNAARCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNI
Ga0157379_109809831	3300014968	Switchgrass Rhizosphere	NMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG*
Ga0157379_110738342	3300014968	Switchgrass Rhizosphere	HECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG*
Ga0132258_116494631	3300015371	Arabidopsis Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVNSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG*
Ga0132257_1017105331	3300015373	Arabidopsis Rhizosphere	MTREKNMPGNPHECRLNAADCSELAKTAVTSECQSLLVLADTWKRLAAELEADQRLLQVLSELQLSSQPYKAFLFALNIHPGLKWPSQKT
Ga0182036_102258631	3300016270	Soil	MPGNPHECRLNAAHCSELAKTAVTSECRALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWSSQKTG
Ga0182033_100348306	3300016319	Soil	GNMPGNPHECRLNAAQCSKLAQSVATSECDALFVLADTWKRLAAELEADHRLLQVLSELDLSSQPYEAFLFALNIHSGLKWPSQKTG
Ga0182032_106605553	3300016357	Soil	VASLIVIDDPEKNMPGNPHECRLNAAHCSELAKTAVTSECRALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0182040_110899262	3300016387	Soil	PHECRLNAAQCSKLAQSVATSECDALFVLADTWKRLAAELEADHRLLQVLSELDLSSQPYEAFLFALNIHSGLKRPSQKTG
Ga0184608_102922131	3300018028	Groundwater Sediment	MPGNPHECRLNAASCSELAQTAATSDSCQALIALAEAWKRLAAELEADQMLLEVLSELELNSQPYDALLLALKLHSWAAWPSRISSQPG
Ga0173481_100207274	3300019356	Soil	MPGNPHECRAAAAQCSKLAQNAITSECDALFALANTWKRLAAELEADQMLLQALSELHLTSQPYEALLCALNIHPGLNWPLPKKPNCRPSE
Ga0173482_103818311	3300019361	Soil	LPGNPHECRVNAAQCSKLAQNAITSECDAFVALAKTWKKLAAELEADQMLLQALSELHLTSQPYEALLCALNIHPGLNWPLPKKPNCRPSE
Ga0173479_102016482	3300019362	Soil	MPGNPHECRLNAAHCLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPSEAFQFALNIHPGLSEPWSGSISAPAQP
Ga0173479_106887342	3300019362	Soil	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0206356_114953371	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	TREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG
Ga0206352_106051491	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0126371_105732962	3300021560	Tropical Forest Soil	MPGNPHECRLNAAQCSKLAKTAVTSECDALFALADTWKRLAAELEADQKLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKAG
Ga0126371_125088262	3300021560	Tropical Forest Soil	MPGNPHECRLNAAHCSKLAQNAVTSECDALFTLADTWKRLAAECEADQRLLQVLSELDLSSQPYEAFLFALNIHSGLKWPSRKKASKSAAAHRWKF
Ga0247785_10225031	3300022889	Soil	MPGNPHECRLNAAHCSELAKTVVASECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ
Ga0247753_10382891	3300022892	Soil	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG
Ga0247795_11033181	3300022899	Soil	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ
Ga0247793_10561102	3300023066	Soil	MPGNPHECRLNAAHCLELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0247752_10294811	3300023071	Soil	MPGNPHECRLNAAHCSELAKTVVASECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG
Ga0247802_10802271	3300023077	Soil	RLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0247796_11183102	3300023261	Soil	CSKLAQNAITSECDAFVALAKTWKKLAAELEADQMLLQALSELHLTSQPYEALLCALNIHPGLNWPLPKKPNCRPSE
Ga0207653_102282581	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGMKWPSQKTG
Ga0207642_100384801	3300025899	Miscanthus Rhizosphere	AKTVDTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG
Ga0207685_100665561	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0207699_114102031	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGMKWPSQKTG
Ga0207707_108189402	3300025912	Corn Rhizosphere	REKNMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG
Ga0207663_100542784	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0207662_100205224	3300025918	Switchgrass Rhizosphere	MTREKNMPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0207649_103521361	3300025920	Corn Rhizosphere	MQRLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWPSQKTG
Ga0207650_106882401	3300025925	Switchgrass Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHHGLKWPSQKTG
Ga0207700_113506011	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTGQWVAGLIVIDDPGEKHAGQSSRMPPQCSALFRAGKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0207644_102132791	3300025931	Switchgrass Rhizosphere	MPGNPHECRLNAAHCLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ
Ga0207706_100391828	3300025933	Corn Rhizosphere	VPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0207667_102253181	3300025949	Corn Rhizosphere	HCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0207668_118005071	3300025972	Switchgrass Rhizosphere	MPGNPHECRLNAAHCLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSE
Ga0207678_105187302	3300026067	Corn Rhizosphere	MPGNPHECRLNAVHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0207702_101934942	3300026078	Corn Rhizosphere	REKNVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0207702_120048851	3300026078	Corn Rhizosphere	MTREKNVPGNPHECRLNAAHCSELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLKWP
Ga0207675_1002301931	3300026118	Switchgrass Rhizosphere	LSMTREKNMPGNPHECRLNAAHCLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFQFALNIHPGLSEPRSRSISAPAQPHRISAQ
Ga0209382_121257422	3300027909	Populus Rhizosphere	NVPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0310888_102848451	3300031538	Soil	MPGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHP
Ga0318541_106000841	3300031545	Soil	MPGNPHECRLNAAQCSKLAQSVATSECDALFVLADTWKRLAAELEADHRLLQVLSELDLSSQPYEAFLFALNIHSGLKRPSQKTG
Ga0310887_105810322	3300031547	Soil	VVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0310915_108004032	3300031573	Soil	QCSKLAQSVATSECDALFVLADTWKRLAAELEADHRLLQVLSELDLSSQPYEAFLFALNIHSGLKRPSQKTG
Ga0318560_105720751	3300031682	Soil	SELAKTAVTSECRALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0306917_105098091	3300031719	Soil	MTREKNMPGNPHECRLNAAHCSELAKTAVTSECRGLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0306918_102167413	3300031744	Soil	MTREKNMPGNPHECRLNAAHCSELAKTAVTSECRALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0306918_113896131	3300031744	Soil	MPGNPHECRLNAAQCSKLAQSVATSECDALFVLADTWKRLAAELEADHRLLQVLSELDLSSQPYEAFLFALNIHSGLKWP
Ga0318546_108359381	3300031771	Soil	MPDNPHECRLNAADCSELAKTAVTSECRALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0310917_102656791	3300031833	Soil	LHPPVVVACVNTIHDPEGNMPGNPHECRLNAAQCSKLAQSVATSECDALFVLADTWKRLAAELEADHRLLQVLSELDLSSQPYEAFLFALNIHSGLKRPSQKTG
Ga0306923_108237611	3300031910	Soil	MPGNPHECRLNAAQCSKLAQSVATSECDALFVLADTWKRLAAELEADHRLLQVLSELDLSSQPYEAFLFALNIHSGLKWPSQKTG
Ga0310912_103898582	3300031941	Soil	MPGNPHECRLNAAHCSELAKTAVTSECRALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKGPSQKTG
Ga0310916_101968183	3300031942	Soil	MPGNPHECRLNAAHCSELAKTAVTSECRGLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0310913_106287542	3300031945	Soil	MPGNPHECRLNAAHCSELAKTAVTSECRALLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0306926_106911372	3300031954	Soil	MTREKNMPGNPHECRLNAAHCSELAKTAVTSECRALLALADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0310903_107929522	3300032000	Soil	CSELAKTVVTSECQSLLVFADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLTWPSQKTG
Ga0310911_107039921	3300032035	Soil	MLGNPHECRLNAAQCSKLAQSVATSECDALFVLADTWKRLAAELEADHRLLQVLSELDLSSQPYEAFLFALNIHSGLKRPSQKTG
Ga0318533_101750243	3300032059	Soil	MPGNPHECRLNAAQCSKLAQSVATSECDALFVLADTWKRLAAELEADHRLLQVLSELDLSSQPYEAFLFALNIHSGLKRPSQK
Ga0310895_103945812	3300032122	Soil	PGNPHECRLNAAHCSELAKTVVTSECQSLLVLADTWKRLAAELEADQSLLQVLSELDLSSQPYEAFLFALNIHPGLKWPSQKTG
Ga0307472_1011248341	3300032205	Hardwood Forest Soil	MPGNPHECRLNAAHCLELAKTVVTSECQALLVLADTWKRLAAELEADQSLLQVLSEVDLSSQPDEACLFALII
Ga0247830_113329971	3300033551	Soil	MPGNPRECRVNAAQFSKLARNAVTSECDALFALADTWKRLAAELEADQMLLQALSELHLTSQPYEALLRALN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047822

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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