Metagenome / Metatranscriptome Family F047790

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F047790
Family Type	Metagenome / Metatranscriptome
Number of Sequences	149
Average Sequence Length	69 residues
Representative Sequence	MSLDDDIAAWAATVRLPDAEAAAIFQRITGTPAPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Number of Associated Samples	112
Number of Associated Scaffolds	149

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.62 %
% of genes near scaffold ends (potentially truncated)	23.49 %
% of genes from short scaffolds (< 2000 bps)	77.18 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.879 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.107 % of family members)
Environment Ontology (ENVO)	Unclassified (23.490 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.705 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.27% β-sheet: 0.00% Coil/Unstructured: 57.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 149 Family Scaffolds
PF08281	Sigma70_r4_2	48.32
PF01565	FAD_binding_4	2.68
PF02126	PTE	2.01
PF07690	MFS_1	1.34
PF13601	HTH_34	1.34
PF12585	DUF3759	1.34
PF06197	DUF998	1.34
PF05762	VWA_CoxE	1.34
PF00175	NAD_binding_1	1.34
PF02909	TetR_C_1	1.34
PF10077	DUF2314	1.34
PF01638	HxlR	0.67
PF00561	Abhydrolase_1	0.67
PF04672	Methyltransf_19	0.67
PF16990	CBM_35	0.67
PF01872	RibD_C	0.67
PF12840	HTH_20	0.67
PF00753	Lactamase_B	0.67
PF08241	Methyltransf_11	0.67
PF02308	MgtC	0.67
PF01266	DAO	0.67
PF00376	MerR	0.67
PF00171	Aldedh	0.67
PF01425	Amidase	0.67
PF05988	DUF899	0.67
PF01850	PIN	0.67
PF13377	Peripla_BP_3	0.67
PF01694	Rhomboid	0.67
PF00111	Fer2	0.67
PF04191	PEMT	0.67
PF01243	Putative_PNPOx	0.67
PF00578	AhpC-TSA	0.67
PF00440	TetR_N	0.67
PF05138	PaaA_PaaC	0.67
PF03551	PadR	0.67
PF01145	Band_7	0.67
PF00106	adh_short	0.67
PF13191	AAA_16	0.67

COG ID	Name	Functional Category	% Frequency in 149 Family Scaffolds
COG1735	Predicted metal-dependent hydrolase, phosphotriesterase family	General function prediction only [R]	2.01
COG3371	Uncharacterized membrane protein	Function unknown [S]	1.34
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	1.34
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.34
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.67
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.67
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.67
COG3396	1,2-phenylacetyl-CoA epoxidase, catalytic subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.67
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	0.67
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.67
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.67
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.67
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	0.67
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.67
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.67
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.67
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.88 %
Unclassified	root	N/A	18.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.88 %
Unclassified	root	N/A	18.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.88 %
Unclassified	root	N/A	18.12 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	78.52 %
Unclassified	root	N/A	18.12 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	76.51 %
Unclassified	root	N/A	18.12 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.67 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	61.74 %
Unclassified	root	N/A	18.12 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.12 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	7.38 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	2.68 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	2.01 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.67 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.67 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.67 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.12 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	7.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.68 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	2.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	2.01 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.67 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.67 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.12 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	6.04 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	2.01 %
Actinacidiphila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila	0.67 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.67 %
Nesterenkonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia	0.67 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.12 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.68 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Nakamurella lactea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	2.01 %
Actinacidiphila acididurans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila acididurans	0.67 %
Actinoplanes brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes brasiliensis	0.67 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.67 %
Nesterenkonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia	0.67 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.67 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10020075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4816	Open in IMG/M
3300001867\|JGI12627J18819_10393244	Not Available	563	Open in IMG/M
3300003368\|JGI26340J50214_10127365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	643	Open in IMG/M
3300004091\|Ga0062387_100115129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1479	Open in IMG/M
3300004152\|Ga0062386_100101514	Not Available	2211	Open in IMG/M
3300005177\|Ga0066690_10344494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1010	Open in IMG/M
3300005434\|Ga0070709_10532596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896	Open in IMG/M
3300005435\|Ga0070714_101457397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300005467\|Ga0070706_101326422	Not Available	660	Open in IMG/M
3300005538\|Ga0070731_10040186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3137	Open in IMG/M
3300005541\|Ga0070733_10152594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1499	Open in IMG/M
3300005542\|Ga0070732_10736171	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005610\|Ga0070763_10009264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3994	Open in IMG/M
3300006028\|Ga0070717_10842098	Not Available	834	Open in IMG/M
3300006176\|Ga0070765_100113994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2360	Open in IMG/M
3300006755\|Ga0079222_10075410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	1678	Open in IMG/M
3300006800\|Ga0066660_10475186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1048	Open in IMG/M
3300006800\|Ga0066660_10739885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300006804\|Ga0079221_10162063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1183	Open in IMG/M
3300006806\|Ga0079220_10411485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	888	Open in IMG/M
3300006854\|Ga0075425_101874734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	672	Open in IMG/M
3300006914\|Ga0075436_101234574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300009090\|Ga0099827_10000524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17630	Open in IMG/M
3300009098\|Ga0105245_11514931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300009137\|Ga0066709_103511143	Not Available	569	Open in IMG/M
3300009792\|Ga0126374_11630286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300010048\|Ga0126373_10001736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15668	Open in IMG/M
3300010048\|Ga0126373_11608684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300010361\|Ga0126378_10310563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1681	Open in IMG/M
3300010361\|Ga0126378_10870192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008	Open in IMG/M
3300010361\|Ga0126378_12071013	Not Available	649	Open in IMG/M
3300010371\|Ga0134125_10276310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1866	Open in IMG/M
3300010373\|Ga0134128_10035738	All Organisms → cellular organisms → Bacteria	5815	Open in IMG/M
3300010373\|Ga0134128_10408609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1516	Open in IMG/M
3300010373\|Ga0134128_11380519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300010376\|Ga0126381_102706254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300010376\|Ga0126381_102864090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300010376\|Ga0126381_102962364	Not Available	675	Open in IMG/M
3300010376\|Ga0126381_103786234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300010379\|Ga0136449_100410704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2396	Open in IMG/M
3300010396\|Ga0134126_12010528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632	Open in IMG/M
3300010867\|Ga0126347_1012059	Not Available	542	Open in IMG/M
3300010937\|Ga0137776_1269596	Not Available	1157	Open in IMG/M
3300010937\|Ga0137776_1693420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	905	Open in IMG/M
3300012198\|Ga0137364_11160281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300012201\|Ga0137365_10288405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1217	Open in IMG/M
3300012203\|Ga0137399_10548777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	971	Open in IMG/M
3300012685\|Ga0137397_10381187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1050	Open in IMG/M
3300012685\|Ga0137397_11103949	Not Available	577	Open in IMG/M
3300012929\|Ga0137404_10639133	Not Available	959	Open in IMG/M
3300012955\|Ga0164298_10083926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1642	Open in IMG/M
3300012960\|Ga0164301_11041471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300012989\|Ga0164305_11511598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300014492\|Ga0182013_10000479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	56030	Open in IMG/M
3300015264\|Ga0137403_11000646	Not Available	683	Open in IMG/M
3300015371\|Ga0132258_10467023	All Organisms → cellular organisms → Bacteria	3149	Open in IMG/M
3300016294\|Ga0182041_11717018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300016387\|Ga0182040_11713281	Not Available	537	Open in IMG/M
3300016445\|Ga0182038_11341819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	640	Open in IMG/M
3300017821\|Ga0187812_1000503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13741	Open in IMG/M
3300017822\|Ga0187802_10039312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	1708	Open in IMG/M
3300017822\|Ga0187802_10114427	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300017823\|Ga0187818_10267159	Not Available	749	Open in IMG/M
3300017924\|Ga0187820_1082215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	907	Open in IMG/M
3300017926\|Ga0187807_1000062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26196	Open in IMG/M
3300017926\|Ga0187807_1053988	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300017933\|Ga0187801_10235209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300017942\|Ga0187808_10005415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4827	Open in IMG/M
3300017970\|Ga0187783_11101953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300020582\|Ga0210395_10004627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10564	Open in IMG/M
3300021170\|Ga0210400_10466901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1042	Open in IMG/M
3300021171\|Ga0210405_10191666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella lactea	1621	Open in IMG/M
3300021178\|Ga0210408_10919281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	680	Open in IMG/M
3300021372\|Ga0213877_10327135	Not Available	524	Open in IMG/M
3300021401\|Ga0210393_10916127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300021402\|Ga0210385_10024113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3885	Open in IMG/M
3300021402\|Ga0210385_10327254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300021406\|Ga0210386_10039210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3735	Open in IMG/M
3300021407\|Ga0210383_10378036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1222	Open in IMG/M
3300021474\|Ga0210390_10022245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5162	Open in IMG/M
3300021477\|Ga0210398_11054826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300021478\|Ga0210402_10572442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1048	Open in IMG/M
3300021478\|Ga0210402_11577271	Not Available	583	Open in IMG/M
3300021478\|Ga0210402_11952203	Not Available	513	Open in IMG/M
3300021560\|Ga0126371_10083305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3144	Open in IMG/M
3300021560\|Ga0126371_10697875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1163	Open in IMG/M
3300021560\|Ga0126371_12911599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300023101\|Ga0224557_1000077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	107404	Open in IMG/M
3300025905\|Ga0207685_10304460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790	Open in IMG/M
3300025906\|Ga0207699_11442560	Not Available	509	Open in IMG/M
3300025910\|Ga0207684_10223559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1625	Open in IMG/M
3300025910\|Ga0207684_10324488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1327	Open in IMG/M
3300025915\|Ga0207693_10136256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1930	Open in IMG/M
3300026327\|Ga0209266_1225303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila acididurans	633	Open in IMG/M
3300027110\|Ga0208488_1012241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1719	Open in IMG/M
3300027110\|Ga0208488_1049668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300027158\|Ga0208725_1011712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes brasiliensis	1449	Open in IMG/M
3300027609\|Ga0209221_1147527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300027652\|Ga0209007_1150258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300027765\|Ga0209073_10179749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300027812\|Ga0209656_10022766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3811	Open in IMG/M
3300027853\|Ga0209274_10260486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	888	Open in IMG/M
3300027867\|Ga0209167_10285024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	891	Open in IMG/M
3300027869\|Ga0209579_10092686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1600	Open in IMG/M
3300027882\|Ga0209590_10013709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3900	Open in IMG/M
3300027905\|Ga0209415_10046122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5742	Open in IMG/M
3300027908\|Ga0209006_10289575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300028789\|Ga0302232_10570737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300028906\|Ga0308309_10205405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1626	Open in IMG/M
3300028906\|Ga0308309_10214628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia	1593	Open in IMG/M
3300031231\|Ga0170824_109814805	Not Available	1021	Open in IMG/M
3300031231\|Ga0170824_122409454	Not Available	630	Open in IMG/M
3300031525\|Ga0302326_11528822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	892	Open in IMG/M
3300031543\|Ga0318516_10887471	Not Available	502	Open in IMG/M
3300031544\|Ga0318534_10555063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300031564\|Ga0318573_10138651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300031669\|Ga0307375_10015666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	6436	Open in IMG/M
3300031708\|Ga0310686_103912468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	2014	Open in IMG/M
3300031708\|Ga0310686_116084843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	828	Open in IMG/M
3300031708\|Ga0310686_117804974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300031723\|Ga0318493_10348681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	805	Open in IMG/M
3300031751\|Ga0318494_10349908	Not Available	855	Open in IMG/M
3300031753\|Ga0307477_10321666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1066	Open in IMG/M
3300031769\|Ga0318526_10472824	Not Available	512	Open in IMG/M
3300031781\|Ga0318547_11058755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300031799\|Ga0318565_10174045	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1046	Open in IMG/M
3300031910\|Ga0306923_12354385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300032010\|Ga0318569_10259666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300032068\|Ga0318553_10445123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300032261\|Ga0306920_101906529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300032770\|Ga0335085_10647231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1182	Open in IMG/M
3300032828\|Ga0335080_11659719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	628	Open in IMG/M
3300032895\|Ga0335074_10010665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12856	Open in IMG/M
3300032895\|Ga0335074_10061020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5143	Open in IMG/M
3300032895\|Ga0335074_10179497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2622	Open in IMG/M
3300032895\|Ga0335074_10429653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1414	Open in IMG/M
3300032895\|Ga0335074_10493140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1275	Open in IMG/M
3300032895\|Ga0335074_10647814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1037	Open in IMG/M
3300032896\|Ga0335075_10005853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19025	Open in IMG/M
3300032896\|Ga0335075_10034711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7229	Open in IMG/M
3300032896\|Ga0335075_10048408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5941	Open in IMG/M
3300032896\|Ga0335075_10393440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1478	Open in IMG/M
3300032896\|Ga0335075_11052152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300032896\|Ga0335075_11096327	Not Available	702	Open in IMG/M
3300032898\|Ga0335072_10834139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	875	Open in IMG/M
3300032898\|Ga0335072_10958574	All Organisms → cellular organisms → Bacteria → Terrabacteria group	792	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.32%
Host-Associated	Host-Associated	2.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.58%
Aquatic	Environmental → Aquatic	10.74%
Plants	Host-Associated → Plants	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.56%
Freshwater	Environmental → Aquatic → Freshwater	9.40%
Peat	Environmental → Terrestrial → Peat	2.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.01%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.05%
Loam	Environmental → Terrestrial → Soil → Loam	14.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.01%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.34%
Clay	Environmental → Terrestrial → Soil → Clay	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.01%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	1.34%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.67%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.40%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.01%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	1.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.34%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.34%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.67%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.67%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.67%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.67%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100200754	3300001356	Peatlands Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAPVPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
JGI12627J18819_103932442	3300001867	Forest Soil	MSLDDDIAAWAATVRLPDAEAAAIFRRITGTPAPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
JGI26340J50214_101273652	3300003368	Bog Forest Soil	MSLDDDIAAWAATVRLADAEADAIFQRIVQTPVSAGPTATPRLDPSWWRGYTAGFAAR
Ga0062387_1001151292	3300004091	Bog Forest Soil	MMSLDDDIAAWAATVRLPDAEAAAIFHRIVGTPAPAPPVTPRLDPSWWRHFTADFAGRMVASTRPVRQAAR*
Ga0062386_1001015141	3300004152	Bog Forest Soil	MSLDDDIAAWAATVRLADAEADAIFQRIVQTPVSAGPTATPRLDPSWWRGYTAGFAARMVTSTRPARRAA*
Ga0066690_103444942	3300005177	Soil	MMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVSAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0070709_105325962	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVSAPSVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0070714_1014573971	3300005435	Agricultural Soil	AWAAAVRLPDAEADAVFRRIVATPVPVLRLDPSWWRDFSARFAARMVDSTRPARRAA*
Ga0070706_1013264222	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SLDDDIAAWAATVRLPDAEADAIFERIVATPAPALPVTPRLDPSWWRHFTADFTARMVASTRSVRQAA*
Ga0070731_100401863	3300005538	Surface Soil	MSLDDDLAAWAATVRLSDTEAAAIFQRIVGAPAPVPAVVPRLDPSWWRHFTADFTARMVASTRPVRQAA*
Ga0070733_101525942	3300005541	Surface Soil	MEMTSLDDDLAAWAATVRLPETEAAAIFQRITATPAPSRPVTRQVDPTWWRHFTAAQTARIVSTTRPAA*
Ga0070732_107361712	3300005542	Surface Soil	MSLDDDLAAWAATVRLRDSEAAAIFEQIVATPVPVTALRLHPSWWRDYTAAFTARMIASTRPARRGA*
Ga0070763_100092642	3300005610	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIAGTPVPFPPFSPRLDPSWWRHFTADFTARMVASTRPVRQAA*
Ga0070717_108420982	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVSAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0070765_1001139943	3300006176	Soil	MSLDDDLAAWAATVRLRDSEAAAIFEQIVATPVPVTALRLHPSWWRDYTAAFTARMIASTRPARRAA*
Ga0079222_100754103	3300006755	Agricultural Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPASAPPVTPPLDPSWWRHFTADFTARMVA
Ga0066660_104751862	3300006800	Soil	MMSLDNDIAAWAATVRLPDAQAAAIFQRIVGSPASALPVTPRLDPSWWRHFTADFTARMVSSTRPVRQAAC*
Ga0066660_107398852	3300006800	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVSDPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0079221_101620633	3300006804	Agricultural Soil	MSLDDDITAWAATVRLPDAEADAIFQRIVRTPASAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0079220_104114852	3300006806	Agricultural Soil	MSLDDDITAWAATVRLPDAEAAAIFQRIVRTPASAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0075425_1018747342	3300006854	Populus Rhizosphere	MSLDDDITAWAATVRLPDAEAAAIFRRITGTPAPAPAVAPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
Ga0075436_1012345741	3300006914	Populus Rhizosphere	MSLDDDITAWAATVRLPDAEAAAIFQRIVRTPASAPPVTPPLDPSWWRHFTADFTARMVASTSP
Ga0099827_1000052414	3300009090	Vadose Zone Soil	MTRLDDDLAAWAATVRLRDADADAIFRRITGTPPALARRPILSGADPSWWRHFTADFTARMVSSTRPARPARPARQAA*
Ga0105245_115149312	3300009098	Miscanthus Rhizosphere	MMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVSAPSVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0066709_1035111432	3300009137	Grasslands Soil	MMSLDDDIAAWAATVRLPDAEAAAVFQRIVRTPVSAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0126374_116302862	3300009792	Tropical Forest Soil	MMSLDDDIAAWAATVRLPDAEAAAIFRRITGTPVAAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
Ga0126373_1000173610	3300010048	Tropical Forest Soil	VNDMTSLDDDIAAWAATVRLSDAEAAAIFHRIAGTPASAPPVAPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
Ga0126373_116086842	3300010048	Tropical Forest Soil	MTSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAPVLLVTPRPDPAWWRHFTADFTTRMVSSTRPVRLAA*
Ga0126378_103105632	3300010361	Tropical Forest Soil	VNEMTSLDDDIAAWAATVRLSDAEAAAIFHRIAGTPAPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
Ga0126378_108701921	3300010361	Tropical Forest Soil	MMSLDDDIAAWAATVRLPDAEAAAIFRRITGTPVPPPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
Ga0126378_120710131	3300010361	Tropical Forest Soil	TVRLPDAEAAVIFRRIVGTPTPASPAPPRLDPVWWRHFTADFTVRMVSSTRPVRHAA*
Ga0134125_102763102	3300010371	Terrestrial Soil	MMSLDDDIAAWAATVRLPDVEAAAIFQRIVGTPVSAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0134128_100357383	3300010373	Terrestrial Soil	MDMTSLDDDLAAWAATVRLPDSDADAIFRRITSTPPPTRRLTPQADPSWWRHFTADLTARMVSTTHPTRQAV*
Ga0134128_104086092	3300010373	Terrestrial Soil	MDMTSLDDDLAAWAATVRVPDTDADAIFRRITGTPPPSYRGRSQVDPAWWRHFTVDFTARMISSTRPARLAA*
Ga0134128_113805192	3300010373	Terrestrial Soil	MMSLDDHIAAWAATVRLPDADADAIFARIVATPVPSATVTPQLAPSWWRSFNAGFAARMVASTSPGSRVRPLVRAA*
Ga0126381_1027062541	3300010376	Tropical Forest Soil	MMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAPAPVVTPRLDPSWWRHFTADFTARMVSSTRPVRHAA*
Ga0126381_1028640902	3300010376	Tropical Forest Soil	MEMSSLDDDLAAWAATVRLPDTDAAAIFSRITSTPAPLRVIKPPLDPSWWRHFTADYTAKMVSSTRPVRLAA*
Ga0126381_1029623642	3300010376	Tropical Forest Soil	MTSLDDDIAAWAATVRLSDAEAAAIFHRIAGTPAPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
Ga0126381_1037862342	3300010376	Tropical Forest Soil	MTSLDDDIAAWAATVRLSDADAAAIFHRIAGTPAPAPVVTPRLDPSWWRHFTADFTARMVSS
Ga0136449_1004107042	3300010379	Peatlands Soil	MTLRRNEENMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAPVPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
Ga0134126_120105281	3300010396	Terrestrial Soil	MMSLDDHIAAWAATVRLPDADADAIFARIVATPVPSATVTPQLAPSWWRSFNAGFAARMVASTSPVSRVRPLIRAA*
Ga0126347_10120591	3300010867	Boreal Forest Soil	DDIAAWAATVRLSDSEAATMLQRITATPTPATAPAASPRLDPSWWRGFNASFAARMVASTRPARLAA*
Ga0137776_12695963	3300010937	Sediment	MSLDDDIAAWADTVRLADAEADAIFARIVQTPVSAGPAATPRLDPSWWRGYTAGFAARMVTSTRPARRAA*
Ga0137776_16934202	3300010937	Sediment	MMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPTSAPAVAPRLDPSWWRHFTADFTARMVSSTRLVRPAA*
Ga0137364_111602812	3300012198	Vadose Zone Soil	MMSLDNDIAAWAATVRLPDAQAAAIFQRIAGSPASALPVTPRLDPSWWRHFTADFTARMVSSTRPVRQAAC*
Ga0137365_102884051	3300012201	Vadose Zone Soil	MMSLDDDIAAWAATVRLPDAEAAAIFQRIVRTPVSAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0137399_105487772	3300012203	Vadose Zone Soil	MMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPASAPPVTPPLDPSWWRHFTADFTGRMVASTRPARLAA*
Ga0137397_103811873	3300012685	Vadose Zone Soil	MMSLDDDIAAWAATVRLPDAEADAIFERIVATPAPALPVTPRLDPAWWRHFTADFTAWRAAS
Ga0137397_111039492	3300012685	Vadose Zone Soil	SLDDDIAAWAATVRLPDAEAAAIFQRIVGTPASAPPVTPPLDPSWWRHFTADFTGRMVASTRPARLAA*
Ga0137404_106391332	3300012929	Vadose Zone Soil	MMSLDDDIAAWAATVRLPDAETAAIFQRIVGTPASAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0164298_100839262	3300012955	Soil	MMSLDDDIAAWAATVRLPDAEAAAIFQRIAGTPAPAPAVTPRLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0164301_110414712	3300012960	Soil	MMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPTSAPPVTPPLDPSWWRHFTADFTARMVASTRPLRQAA*
Ga0164305_115115981	3300012989	Soil	MMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVSAPSVTPPLDPSWWRHFTADFTARMVSSTRPVRQAA*
Ga0182013_1000047935	3300014492	Bog	MSLDDDLAAWAATVRLRDDEAAVIFQRLVRTPAPVPVAKSRLDSSWWRDFNADFAARLIASTRPARRAA*
Ga0137403_110006462	3300015264	Vadose Zone Soil	SLDDDIAAWAATVRLPDAEAAAIFQRIVGTPASAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA*
Ga0132258_104670233	3300015371	Arabidopsis Rhizosphere	MMSLDDDIAAWAATVRLPDAEAAAIFRRITGTPAPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA*
Ga0182041_117170181	3300016294	Soil	MMSLDDDIAAWAAAVRLPDAEAAAIFQRIIGTPAPAPVVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0182040_117132811	3300016387	Soil	RGRGARPLRWPHGDMMSLDDDIAAWAATVRLPDAEAAAIFRRITGTPVPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0182038_113418192	3300016445	Soil	MSLDDDIAAWAATVRLPDAEAAAIFRRIAGTPAPPPLRLDPSWWWCFTADYTARMIFSTRPVRPAA
Ga0187812_10005039	3300017821	Freshwater Sediment	MSLDDDLAAWAASVRLPDAEAAAMFERIVRTPVVTPPDAPVSSPPAAAAGLDPSWWRHFSAGFAARMVASNRPVRRAA
Ga0187802_100393123	3300017822	Freshwater Sediment	MSLDDDLAAWAATVRLPDAEAAAIFQRIVGTPAPAPPVTSVTSVAPPLDPAWWGHFTADFTARMVSSTRPVRRAA
Ga0187802_101144272	3300017822	Freshwater Sediment	MTLRRNDEIMSLDDDIAAWAATVRLPDAEAAAIFQRIVGSPAPAPPVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0187818_100608943	3300017823	Freshwater Sediment	MSLDDDLAAWAASVRLPDAEAAAMFERIVRTPVVTPPAAPVSSPPAAAAGLDPSWWRHFSAGFAARMVASNRPVRRAA
Ga0187818_102671591	3300017823	Freshwater Sediment	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGSPAPAPPVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0187820_10822151	3300017924	Freshwater Sediment	MTLRRNDEIMSLDDDIAAWAATVRLPDAEAAAIFQRIVQTPVSAGHTAAPRLDPSWWRGYTAGFAARMVTSTRPA
Ga0187807_100006210	3300017926	Freshwater Sediment	MSLDDDIAAWAATVRLTDADADAIFQRIVATPVRSATATPSLAPSWWRSFNAGFAARMVASTSPARRAA
Ga0187807_10539882	3300017926	Freshwater Sediment	MSLDDDIAAWAASVRLPDAEAAAIFERIVATPVPLAPVSAPRLDPSWWQRYTADFTARIITSTRPARLVAA
Ga0187801_102352092	3300017933	Freshwater Sediment	MSLDDDLAAWAATVRLPDAEAAAIFQRIVGTPAPAPSVTSVTSVAPPLDPAWWGHFTADFTARMVSSTRPVRRAA
Ga0187808_100054153	3300017942	Freshwater Sediment	MSLDDDLAAWAATVRLPDAEAAAIFQRIVGTPAPAPSVTSVTSVAPPLDPAWWGHFTADFTARLVSSTRPVRRAA
Ga0187783_111019532	3300017970	Tropical Peatland	MSLDDDLAAWAATVRLPDAEAAAILQRIAGTPAPALPVMPRLDPSWWRHFTADFAARMVASTRPARLAA
Ga0210395_100046278	3300020582	Soil	MSLDDDLAAWAATVRLPDAEADAMFQRIVRAPVTAAPSPSSPSAAPARLDPSWWRHFSAGFAARMVASNRPVRVAA
Ga0210400_104669012	3300021170	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAAVPPVTPRLDPSWWRHFTADFTVRMVASTRPVRQAA
Ga0210405_101916663	3300021171	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAAAPPVTPRLDPSWWRHFTADFTVRMVASTRPVRQAA
Ga0210408_109192812	3300021178	Soil	LDDDIAAWAATVRLPDAEAAAIFQRIVGTPAAVPPVTPRLDPSWWRHFTADFTVRMVASTRPVRQAA
Ga0213877_103271351	3300021372	Bulk Soil	MSLDDDIAAWAATVRLADAEADDIFQRIVQTPMRTATSTPRLDPSWWRGYNAGFAARMITSTRAARRAA
Ga0210393_109161272	3300021401	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAAAPPVTPRLDPSWWRHFTADFTARMVASTRPARQAA
Ga0210385_100241135	3300021402	Soil	MSLDDDLAAWAASVRLPDTEAAAIFERIVRSPAAASSSSPSVLPARLDPSWWRHFSAGFAARMVASNRPVRVAA
Ga0210385_103272542	3300021402	Soil	MTLRRNDEIMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAPAPVVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0210386_100392103	3300021406	Soil	MSLDDDLAAWAATVQLPDAEAAAIFQRIVGTSAPAPPVTQITPVTPVSPPLDPAWWGHFTADFTARMVSSTRPVRRAA
Ga0210383_103780361	3300021407	Soil	MSLDDDLAAWAATVRLPDAEAAAIFQRIAGTPVPFPPFSPRLDPSWWRHFTADFTARMVASTRPVRQAA
Ga0210390_100222456	3300021474	Soil	MSLDDDIAAWAATMRLSDAEAAAIFQRIVGTPTSAPPVTPRLDPAWWRHFTADFTARMVSSTRPVRQAA
Ga0210398_110548262	3300021477	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIAGTPVPFPPFSPRLDPSWWRHFTADFTARMVASTRPVRQAA
Ga0210402_105724423	3300021478	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPTPTRAPAITPRLDPSWWRHFTADFTARMVSSTRPL
Ga0210402_115772711	3300021478	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAPAPPVTPLLDPFWWRHFTADFTARMVASTRPARQAA
Ga0210402_119522031	3300021478	Soil	MEMPSLDDDLAAWGATVRLPATDADAIFRQITTTPAPARRVTSPTDPSWWRHFTADFTARMVSSTRPLRPAA
Ga0126371_100833052	3300021560	Tropical Forest Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRITGTPAPAPAVTPRLDPSWWRHYTADFTARMVSSTRPVRQAA
Ga0126371_106978752	3300021560	Tropical Forest Soil	MSLDDDIAAWAAAVRLPDAEAAAIFQRIVGSPPAAPSATPQLDPSWWRHFTADFTARMVASTRPVRHAA
Ga0126371_109002362	3300021560	Tropical Forest Soil	MSLDDHIAAWAATVRLADTDADAIFARIVATPVRSAEVTPRLAASWWGDYNAGFAARMVASTRQARRAA
Ga0126371_129115992	3300021560	Tropical Forest Soil	MMSLDDDIAAWAAAVRLPDDEAAAIFQRIVGSPPPALPATPRLETSWWRHFTADFTARMVASTRPVRHAA
Ga0224557_100007786	3300023101	Soil	MSLDDDLAAWAATVRLRDDEAAVIFQRLVRTPAPVPVAKSRLDSSWWRDFNADFAARLIASTRPARRAA
Ga0207685_103044602	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDDDIAAWAATVRLPDAEAAVIFQRIVGTPVPAPPVTPPLDPSWWRHFTAGFTARMVASTSPARLAA
Ga0207699_114425601	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVSAPSVTPPLDPSWWRHFTADFTARMVASTSPARLAA
Ga0207684_102235593	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVSAPPVTPPLDPSWWRHFTADFTAR
Ga0207684_103244881	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLDDDIAAWAATVRLPDTDAAAIFQRIARTPAPAPPVTLRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0207693_101362562	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVSAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA
Ga0209266_12253032	3300026327	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIAGTPAPAPLVTPRLDPSWWRHFTADFTARMVSSTRPARQAA
Ga0208488_10122411	3300027110	Forest Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIAAAPVPAPLVPPRLDPSWWRHFTADFTTRM
Ga0208488_10496682	3300027110	Forest Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIAGTPVPVPPFSPRLDPSWWRHFTADFTARMVASTRPVRQAA
Ga0208725_10117123	3300027158	Forest Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIAGTPVPFPPFSPRLDPSWWRHFTADFTARMVASTRPV
Ga0209221_11475272	3300027609	Forest Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIAGTPVPFPPFSPFPPRLDPSWWRHFTADFTARMVASTRPVRQAA
Ga0209007_11502581	3300027652	Forest Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIAGTPVPFLPFSPRLDPSWWRHFTADFTARMVASTRPVRQAA
Ga0209073_101797492	3300027765	Agricultural Soil	MSLDDDITAWGATVRLPDAEAAAIFQRIVRTPASAPPVTPPLDPSWWRHFTADFTARMVASTSPARLAA
Ga0209656_100227662	3300027812	Bog Forest Soil	MSLDDDIAAWAATVRLADAEADAIFQRIVQTPVSAGPTATPRLDPSWWRGYTAGFAARMVTSTRPARRAA
Ga0209274_102604861	3300027853	Soil	MTLRRNDEIMSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0209167_102850241	3300027867	Surface Soil	MEMTSLDDDLAAWAATVRLPETEAAAIFQRITATPAPSRPVTRQVDPTWWRHFTAAQTARIVSTTRPAA
Ga0209579_100926863	3300027869	Surface Soil	MSLDDDLAAWAATVRLSDTEAAAIFQRIVGAPALVPAVVPRLDPSWWRHFTADFTARMVASTRPVRQAA
Ga0209169_106855471	3300027879	Soil	MSLDDDLAAWAATVRLPDADAAAIFQRIVVAPAAPAAWPAVAPRLKPSWWRGYNAGFAARMVA
Ga0209590_100137091	3300027882	Vadose Zone Soil	ADAIFRRITGTPPALARRPILSGADPSWWRHFTADFTARMVSSTRPARPARPARQAA
Ga0209415_100461223	3300027905	Peatlands Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAPVPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0209006_102895752	3300027908	Forest Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPAAAPPVTPRLDPSWWRHFTADFTLRMVASTRPVRQAA
Ga0302232_105707371	3300028789	Palsa	MSLDDDIAAWAAAIRLPEAEAAAIFQRIAGTPVPAPLVPPRLDPSWWRHFTADFTARMVASTRPVRQEA
Ga0308309_102054053	3300028906	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIAGTPVPFPPFSPRLDPSWWRHFTADFTTRMVASTRPVRQAA
Ga0308309_102146281	3300028906	Soil	MSLDDDLAAWAATVRLRDSEAAAIFEQIVATPVPVTALRLHPSWWRDYTAAFTARMIASTRPARRAA
Ga0170824_1098148052	3300031231	Forest Soil	SLDDDLAAWAATVRLPDTEADAIFRRITAIPAPARPVTSPTDPSWWRHFTADFTARMVSSTRPLRQAA
Ga0170824_1224094542	3300031231	Forest Soil	MEMPSLDDDLAAWAATVRLPDTDADAIFRQITGTSVPAHLVTPRVDPAWWRHFTADFTARMVSSTRPVRSAA
Ga0302326_115288222	3300031525	Palsa	DDDIAAWAATVRLPDAEAAAIFQRIAGTPVPVPPLLDPSWWRHFTADFTARMVASTRPVRQAA
Ga0318516_108874711	3300031543	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRITGTPAPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0318534_105550631	3300031544	Soil	MMSLDDDIAAWAAAVRLPDAEAAAIFQRIVGPPAAAPAAPRLDPSWWRHFTADFTTRMVASTRPVRHAA
Ga0318573_101386513	3300031564	Soil	MMSLDDDIAAWAATVRLADAEANDIFQRIVSTPVRSAMPRLDPSWWRGYNAGFAARMVTSTRPVRRAA
Ga0307375_100156664	3300031669	Soil	MMMNLDDDIAAWAATVRLPDTQAAAVFQQIVATPAPGPPAAPRLDPSWWRHFTADFTARMVSSTRPVRQAV
Ga0310686_1039124681	3300031708	Soil	MSLDDDLAAWAATARLPDAEAAAIFQRIVGTPVPAPAVTPRLDPSWWRHYTADFTARIVSSTRPVRRAA
Ga0310686_1160848431	3300031708	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRIVGTPVLTPPVTPRLDPSWWRHFTSDFTARMVSSTRPVRQAA
Ga0310686_1178049741	3300031708	Soil	MSLDDDIAAWAAAIRLADAEAEAIFQRIAATPVPAPLVPPGLDPSWWRHFTADFTARMVASTRPVRQAA
Ga0318493_103486812	3300031723	Soil	AEAAANFQRITGTPAPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0318494_103499081	3300031751	Soil	AAAVRLPDAEAAAIFQRIVGPPAAAATPRLDPSWWRHFTADFTARMVASTRPVRRAA
Ga0307477_103216663	3300031753	Hardwood Forest Soil	MSLDDDIAAWAATVRLPDAEAAAIFRRITGTPAPAPPVTLRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0318526_104728242	3300031769	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRITGTPAPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVR
Ga0318547_110587552	3300031781	Soil	MSLDDDIAAGAATVRLADAEADDIFQRIVSTPVRSAMPRLDPSWWRGYNAGFAARMVTSTRPVRRAA
Ga0318565_101740452	3300031799	Soil	QMMSLDDDIAAWAAAVRLPDAEAAAIFQRIVGPPAAAPAAPRLDPSWWRHFTADFTTRMVASTRPVRHAA
Ga0306923_123543852	3300031910	Soil	MSLDDDIAAWAATVRLPDAEAAAIFRRITGTPVPAPAVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0318569_102596661	3300032010	Soil	MSLDDDIAAWAATVRLADAEADDIFQRIVSTPVRSATPRLDPSWWRGYNAGFAARMVTSTRPVRRAA
Ga0318553_104451232	3300032068	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRITGTPAPAPAVTPRLDPSWWRQFTADFTARMVSSTRPVRQAA
Ga0306920_1019065292	3300032261	Soil	TGYPWPDGPWPRHSAATMTQGDMMSLDDDIAAWAATVRLPDAEAAAIFRRIAGTPAPALPRLDPSWWRRFTADYTARMIFSTRPVRPAA
Ga0335085_106472312	3300032770	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRITGTPVPALAVPPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0335080_116597191	3300032828	Soil	MSLDDDIAAWAATVRLPDAEAAAIFQRITATPVPAPRVTPRLDPSWWRHFTADFTARMVSSTRPVRQAA
Ga0335074_1001066511	3300032895	Soil	MSLDDDISAWAATVRLTDAEADDIFGRIAATPLPGPTPRLDAQWWRGFTADFAARMVTSTRPVRQAA
Ga0335074_100610203	3300032895	Soil	MSLDDDISAWAATVRLTDAEADDIFGRIVQAPVPDQAPQLHPSWWRGFTADFAARMVTSTRPARQAA
Ga0335074_101794973	3300032895	Soil	MSLDDDISAWAATVRLTDAEADDIFGRIAATPVREPAPRLDASWWRGFTADFATRMVTSTRPVRQAA
Ga0335074_104296533	3300032895	Soil	MSLDDDLAAWAATARLTDAEADDIFGRIAATPVREPTPRLDASWWRGFTADFATRMVTSTRPVRQAA
Ga0335074_104931403	3300032895	Soil	MSLDDDIAAWAATVRLTDTEADGIVGRIVATPIQDQTPRLDPKWWRGFTADFAARMVISTRPVRLAA
Ga0335074_106478142	3300032895	Soil	MSLDDDLAAWAATVRLSGAEAAAIYQRIVGTPAPAPSVTPPLDPAWWRHFTADFTTRMVSSTRPVRRAA
Ga0335075_1000585310	3300032896	Soil	MMSLDDDIAAWAATVRLPDAEAAALFQRIVATAAPPLAVAPPPGPSWWRDFTAGFAARMVSSTRPVRQAA
Ga0335075_100347111	3300032896	Soil	MSLDDDISAWAATVRLTDAEADDIVGRIAATPVPEHAPQLHPSWWRGFTADFAARMVTSTRPVRQAA
Ga0335075_100484086	3300032896	Soil	MSLDDDISAWATTVRLTDAEADDIFGRIVQAPVREPTPRLDASWWRGFTADFATRMVTSTRPVRQAA
Ga0335075_103934402	3300032896	Soil	MSLDDDISAWAATVRLTDAEADDIFGRIAATPVPEQAPQLHPSWWRGFTADFAARMVTSTRPARRAA
Ga0335075_110521522	3300032896	Soil	MSLDDDIAAWAATARLTDAEADDIFGRIAATPVREPTPRLDASWWRGFTADFATRMVTSTRPVRQAA
Ga0335075_110963272	3300032896	Soil	MSLDDDISAWAATVRLTDAEADDVFGRILQTPVPAPAPRLDASWWRGFTADFATRMVTSTRPVRRAA
Ga0335072_108341392	3300032898	Soil	MSLDDDIAAWAATVRLDDADAATIFQRIVATPAPLAPVSAPRLDPSWWQRYTADFTARMISSTRPVRMAAA
Ga0335072_109585743	3300032898	Soil	VRLTDTEADGIVGRIVATPIQDQTPRLDPKWWRGFTADFAARMVISTRPVRLAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F047790

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences